Personal tools

FFCP PHASE1:Mm9::chr1:50984341..50984350,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56363
|EntrezGene=56363
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9QYM9
|UniProt=Q9QYM9
|association_with_transcript=-12bp_to_ENSMUST00000081851_5end
|association_with_transcript=-12bp_to_ENSMUST00000081851_5end
|cluster_id=chr1:50984341..50984350,+
|description=CAGE_peak_2_at_Tmeff2_5end
|description=CAGE_peak_2_at_Tmeff2_5end
|id=chr1:50984341..50984350,+
|id=chr1:50984341..50984350,+
|ontology_enrichment_celltype=CL:0000540!2.65e-15!33;CL:0000047!2.65e-15!33;CL:0000031!2.65e-15!33;CL:0000404!2.65e-15!33;CL:0000221!5.59e-14!44;CL:0000133!5.59e-14!44;CL:0002319!7.12e-14!43;CL:0000393!5.03e-13!39;CL:0000211!5.03e-13!39;CL:0000055!1.44e-11!50;CL:0000117!2.36e-11!23;CL:0000337!2.36e-11!23
|ontology_enrichment_celltype=CL:0000540!2.65e-15!33;CL:0000047!2.65e-15!33;CL:0000031!2.65e-15!33;CL:0000404!2.65e-15!33;CL:0000221!5.59e-14!44;CL:0000133!5.59e-14!44;CL:0002319!7.12e-14!43;CL:0000393!5.03e-13!39;CL:0000211!5.03e-13!39;CL:0000055!1.44e-11!50;CL:0000117!2.36e-11!23;CL:0000337!2.36e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.80e-19,33;CL:0000047,1.80e-19,33;CL:0000031,1.80e-19,33;CL:0000404,1.80e-19,33;CL:0002319,2.77e-18,43;CL:0000393,1.01e-17,39;CL:0000211,1.01e-17,39;CL:0000221,1.28e-17,44;CL:0000133,1.28e-17,44;CL:0000117,6.51e-14,23;CL:0000337,6.51e-14,23;CL:0002321,1.74e-09,70;CL:0000107,1.27e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.59e-30!73;UBERON:0005743!2.59e-30!73;UBERON:0000073!7.60e-29!75;UBERON:0001016!7.60e-29!75;UBERON:0004121!7.60e-28!102;UBERON:0000924!7.60e-28!102;UBERON:0006601!7.60e-28!102;UBERON:0002346!3.72e-24!71;UBERON:0003075!3.72e-24!71;UBERON:0007284!3.72e-24!71;UBERON:0001049!1.06e-20!52;UBERON:0005068!1.06e-20!52;UBERON:0006241!1.06e-20!52;UBERON:0007135!1.06e-20!52;UBERON:0000955!5.38e-20!50;UBERON:0006238!5.38e-20!50;UBERON:0000033!1.89e-19!63;UBERON:0002616!2.32e-19!49;UBERON:0002020!3.67e-18!34;UBERON:0003056!1.70e-16!49;UBERON:0003080!1.49e-15!40;UBERON:0002791!2.15e-15!29;UBERON:0003528!2.15e-15!29;UBERON:0001893!2.15e-15!29;UBERON:0002780!7.23e-15!39;UBERON:0001890!7.23e-15!39;UBERON:0006240!7.23e-15!39;UBERON:0000956!8.74e-11!21;UBERON:0001869!8.74e-11!21;UBERON:0000203!8.74e-11!21;UBERON:0002619!1.16e-10!17;UBERON:0000153!8.90e-09!94;UBERON:0007811!4.87e-08!86;UBERON:0002021!5.14e-08!10;UBERON:0000411!5.14e-08!10;UBERON:0001950!5.14e-08!10;UBERON:0000468!6.37e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.27e-38,73;UBERON:0001016,4.57e-37,75;UBERON:0004121,8.39e-31,95;UBERON:0000924,8.39e-31,95;UBERON:0006601,8.39e-31,95;UBERON:0000073,2.74e-26,54;UBERON:0002346,3.20e-25,64;UBERON:0003075,3.20e-25,64;UBERON:0007284,3.20e-25,64;UBERON:0002020,1.40e-24,34;UBERON:0001049,5.49e-24,52;UBERON:0005068,5.49e-24,52;UBERON:0006241,5.49e-24,52;UBERON:0007135,5.49e-24,52;UBERON:0010371,2.57e-21,73;UBERON:0003528,3.50e-20,29;UBERON:0002791,3.50e-20,29;UBERON:0001893,3.50e-20,29;UBERON:0000955,7.98e-20,47;UBERON:0006238,7.98e-20,47;UBERON:0002616,6.33e-19,46;UBERON:0003080,1.25e-16,40;UBERON:0003056,1.10e-15,49;UBERON:0002780,1.20e-15,39;UBERON:0001890,1.20e-15,39;UBERON:0006240,1.20e-15,39;UBERON:0002619,5.69e-15,17;UBERON:0010314,8.83e-14,92;UBERON:0000956,5.80e-13,21;UBERON:0001869,5.80e-13,21;UBERON:0000203,5.80e-13,21;UBERON:0002021,5.17e-12,10;UBERON:0000411,5.17e-12,10;UBERON:0001950,5.17e-12,10;UBERON:0002420,1.28e-08,8;UBERON:0007245,1.28e-08,8;UBERON:0010009,1.28e-08,8;UBERON:0010011,1.28e-08,8;UBERON:0000454,1.28e-08,8;UBERON:0003076,4.48e-08,12;UBERON:0003057,4.48e-08,12;UBERON:0002410,1.27e-07,9
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,2.02753862439029,0.183546752161682,0,0.872100625521786,1.09843091367236,2.52758868796568,1.1198913730029,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,4.43681982454325,0,0.889294796111139,0,0,0,1.49800055259202,1.15265491596466,0.622137673850866,0.675029691658453,0.210324961351382,5.42736870367227,3.53389665522582,2.44981598429908,0.862609239164127,1.83843757322004,8.8092704799511,5.87361755191863,4.76180253094355,2.63772575460388,2.37867873366265,2.08365348222704,6.70039197603314,6.75315132038016,5.65353516774197,4.41942878210502,4.41352210477219,1.3047961207771,0,0.0755715601067855,1.44932244350839,0,0,0.539703191637817,0,0,0.421333260395256,0.170430322578058,0,0,0.704217098883403,0,0,0,0,0,0,0,0.258937883647172,1.63286352971307,0.693941307064543,0.608930956624282,0.922461989024234,0.60289056221049,0.940709657085638,0.125666591329675,0,0.578397427679647,0,0.808834249737046,0,0,0,5.5628351432194,4.60782754989601,0,0,0,0,6.5907881338122,2.74500361691176,3.76963056338593,8.16974304903699,5.37002460393694,5.40248915854856,4.86723789203273,0.916554274652847,0.124406970610093,0.252722758433675,0.420883711772948,0.650602214813519,0.229902104433473,0.360124259610698,0.60281927134286,1.63287597963187,1.15302348256365,1.03071897015702,1.55222022443409,0.215567992932842,0.378212160335639,0.527853372491847,1.31517439456545,0.556094498451196,1.74126083261083,0.411564272815887,0.398068533636986,0,0,0,0.828503090142008,0.234526059981096,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0,0.329119699826961,0,0,0.146199987425332,0,0,5.88811855979556,2.98423375899925,0,0,0.426576501070468,0.696710015581316,0.515469845288373,0.403367049246685,0.22237804384487,0.570676878337677,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0.31399745568275,0,0,0.500535317148282,0,0,0.202860121388503,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0.469380496577004,0.335012514883631,0,0,0.157635144106191,0.44292937929755,0.478364305972461,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,5.13761887960934,3.98519734413491,0,1.26235463602186,1.57754109708128,2.73307121007647,3.01592756825919,1.67278158566786,1.78238939265915,2.54768877709949,2.02405350837447,1.75353514746787,1.97643888973262,4.4984984299053,0.709700426041343,0.534196811001766,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0,0.295301892880773,0,1.03371317267288,1.09060118843252,0.356497378384721,0.948110273807448,1.05418608574999,0,0,0.540183282093931,0,0.428674070063185,0.532020700926821,0.891844088010353,0.987294123612726,0.913394847343798,0,0,0.220528398054962,0.8244312647074,1.61464426695906,0.422190474497091,0.358117032009409,0.164140899745061,0,3.52308073819968,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0,0,0.777804753376191,0.645799117388655,0.337912250981556,0.234714477291508,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0.179427713218951,0,1.35232715822533,0.187682475451182,0,0.643105137237198,0.501572104035363,3.95326289831947,8.28585425712918,5.15605962095457,5.84300819968538,4.7955776383945,6.7985450765073,6.75022500231806,3.60256962579376,6.34399372577886,8.28416498802912,0.31136204275253,0.798049746802062,0.341467211508268,0.243106717068294,1.04806581313991,0.367687016900028,0.666740183404846,1.23621034343337,0.962757628775446,1.51618327058278,2.5347929989024,0.943131706930381,1.31098110457835,1.15245274328765,1.20614484806788,2.38146845641537,1.73826488917283,0.578727661391115,0.412085900803307,0.883193520806384,1.37147700954166,0.887379030796687,1.43061713968393,1.0174249164263,1.50575008664529,0.761531471025089,0.914639864363863,1.05227884575137,1.22223702461276,1.12228454331548,0.949080144993393,0.886540341380071,1.22769312950907,2.16911577660352,1.54325288784913,1.24905288968973,0.701794825336225,1.07435527024149,0.765153328275374,1.54413993383661,0.695603506861264
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,2.02753862439029,0.183546752161682,0,0.872100625521786,1.09843091367236,2.52758868796568,1.1198913730029,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,4.43681982454325,0,0.889294796111139,0,0,0,1.49800055259202,1.15265491596466,0.622137673850866,0.675029691658453,0.210324961351382,5.42736870367227,3.53389665522582,2.44981598429908,0.862609239164127,1.83843757322004,8.8092704799511,5.87361755191863,4.76180253094355,2.63772575460388,2.37867873366265,2.08365348222704,6.70039197603314,6.75315132038016,5.65353516774197,4.41942878210502,4.41352210477219,1.3047961207771,0,0.0755715601067855,1.44932244350839,0,0,0.539703191637817,0,0,0.421333260395256,0.170430322578058,0,0,0.704217098883403,0,0,0,0,0,0,0,0.258937883647172,1.63286352971307,0.693941307064543,0.608930956624282,0.922461989024234,0.60289056221049,0.940709657085638,0.125666591329675,0,0.578397427679647,0,0.808834249737046,0,0,0,5.5628351432194,4.60782754989601,0,0,0,0,6.5907881338122,2.74500361691176,3.76963056338593,8.16974304903699,5.37002460393694,5.40248915854856,4.86723789203273,0.916554274652847,0.124406970610093,0.252722758433675,0.420883711772948,0.650602214813519,0.229902104433473,0.360124259610698,0.60281927134286,1.63287597963187,1.15302348256365,1.03071897015702,1.55222022443409,0.215567992932842,0.378212160335639,0.527853372491847,1.31517439456545,0.556094498451196,1.74126083261083,0.411564272815887,0.398068533636986,0,0,0,0.828503090142008,0.234526059981096,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0,0.329119699826961,0,0,0.146199987425332,0,0,5.88811855979556,2.98423375899925,0,0,0.426576501070468,0.696710015581316,0.515469845288373,0.403367049246685,0.22237804384487,0.570676878337677,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0.31399745568275,0,0,0.500535317148282,0,0,0.202860121388503,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0.469380496577004,0.335012514883631,0,0,0.157635144106191,0.44292937929755,0.478364305972461,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,5.13761887960934,3.98519734413491,0,1.26235463602186,1.57754109708128,2.73307121007647,3.01592756825919,1.67278158566786,1.78238939265915,2.54768877709949,2.02405350837447,1.75353514746787,1.97643888973262,4.4984984299053,0.709700426041343,0.534196811001766,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0,0.295301892880773,0,1.03371317267288,1.09060118843252,0.356497378384721,0.948110273807448,1.05418608574999,0,0,0.540183282093931,0,0.428674070063185,0.532020700926821,0.891844088010353,0.987294123612726,0.913394847343798,0,0,0.220528398054962,0.8244312647074,1.61464426695906,0.422190474497091,0.358117032009409,0.164140899745061,0,3.52308073819968,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0,0,0.777804753376191,0.645799117388655,0.337912250981556,0.234714477291508,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0.179427713218951,0,1.35232715822533,0.187682475451182,0,0.643105137237198,0.501572104035363,3.95326289831947,8.28585425712918,5.15605962095457,5.84300819968538,4.7955776383945,6.7985450765073,6.75022500231806,3.60256962579376,6.34399372577886,8.28416498802912,0.31136204275253,0.798049746802062,0.341467211508268,0.243106717068294,1.04806581313991,0.367687016900028,0.666740183404846,1.23621034343337,0.962757628775446,1.51618327058278,2.5347929989024,0.943131706930381,1.31098110457835,1.15245274328765,1.20614484806788,2.38146845641537,1.73826488917283,0.578727661391115,0.412085900803307,0.883193520806384,1.37147700954166,0.887379030796687,1.43061713968393,1.0174249164263,1.50575008664529,0.761531471025089,0.914639864363863,1.05227884575137,1.22223702461276,1.12228454331548,0.949080144993393,0.886540341380071,1.22769312950907,2.16911577660352,1.54325288784913,1.24905288968973,0.701794825336225,1.07435527024149,0.765153328275374,1.54413993383661,0.695603506861264
|short_description=p2@Tmeff2
|short_description=p2@Tmeff2
}}
}}

Latest revision as of 04:47, 27 September 2015

Short description:p2@Tmeff2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tmeff2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -12bp_to_ENSMUST00000081851_5end
EntrezGene:Tmeff2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Tmeff2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.59
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D58.17
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.27e-3873
nervous system4.57e-3775
ectoderm-derived structure8.39e-3195
ectoderm8.39e-3195
presumptive ectoderm8.39e-3195
regional part of nervous system2.74e-2654
neurectoderm3.20e-2564
neural plate3.20e-2564
presumptive neural plate3.20e-2564
gray matter1.40e-2434
neural tube5.49e-2452
neural rod5.49e-2452
future spinal cord5.49e-2452
neural keel5.49e-2452
ecto-epithelium2.57e-2173
brain grey matter3.50e-2029
regional part of telencephalon3.50e-2029
telencephalon3.50e-2029
brain7.98e-2047
future brain7.98e-2047
regional part of brain6.33e-1946
anterior neural tube1.25e-1640
pre-chordal neural plate1.10e-1549
regional part of forebrain1.20e-1539
forebrain1.20e-1539
future forebrain1.20e-1539
regional part of cerebral cortex5.69e-1517
structure with developmental contribution from neural crest8.83e-1492
cerebral cortex5.80e-1321
cerebral hemisphere5.80e-1321
pallium5.80e-1321
occipital lobe5.17e-1210
visual cortex5.17e-1210
neocortex5.17e-1210
basal ganglion1.28e-088
nuclear complex of neuraxis1.28e-088
aggregate regional part of brain1.28e-088
collection of basal ganglia1.28e-088
cerebral subcortex1.28e-088
posterior neural tube4.48e-0812
chordal neural plate4.48e-0812
autonomic nervous system1.27e-079
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:50984341..50984350,%2B&oldid=4293363"