FFCP PHASE1:Mm9::chr3:105255067..105255095,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:105255067..105255095,+ to FFCP PHASE1:Mm9::chr3:105255067..105255095,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56543 | |EntrezGene=56543 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2356 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0V1,Q3UH54 | |UniProt=Q9Z0V1,Q3UH54 | ||
|association_with_transcript=-152bp_to_ENSMUST00000098761,NM_001039347,uc008qux.1,uc008quy.1_5end | |||
|cluster_id=chr3:105255067..105255095,+ | |||
|description=CAGE_peak_4_at_Kcnd3_5end | |||
|id=chr3:105255067..105255095,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.15e-07!23;CL:0000337!2.15e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.72e-07,23;CL:0000337,4.72e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.68e-20!71;UBERON:0003075!4.68e-20!71;UBERON:0007284!4.68e-20!71;UBERON:0000033!4.46e-19!63;UBERON:0000955!7.68e-18!50;UBERON:0006238!7.68e-18!50;UBERON:0001049!3.42e-17!52;UBERON:0005068!3.42e-17!52;UBERON:0006241!3.42e-17!52;UBERON:0007135!3.42e-17!52;UBERON:0002616!4.09e-17!49;UBERON:0001017!9.51e-17!73;UBERON:0005743!9.51e-17!73;UBERON:0000073!2.10e-16!75;UBERON:0001016!2.10e-16!75;UBERON:0003056!5.57e-16!49;UBERON:0004121!1.28e-15!102;UBERON:0000924!1.28e-15!102;UBERON:0006601!1.28e-15!102;UBERON:0003080!8.40e-14!40;UBERON:0002780!3.76e-13!39;UBERON:0001890!3.76e-13!39;UBERON:0006240!3.76e-13!39;UBERON:0002020!3.86e-12!34;UBERON:0002791!2.73e-11!29;UBERON:0003528!2.73e-11!29;UBERON:0001893!2.73e-11!29;UBERON:0003886!5.42e-09!38;UBERON:0002323!1.15e-08!37;UBERON:0004458!1.15e-08!37;UBERON:0002553!2.40e-08!39;UBERON:0005156!4.27e-08!26;UBERON:0000990!4.27e-08!26;UBERON:0000991!7.09e-08!18;UBERON:0005564!7.09e-08!18;UBERON:0000956!1.15e-07!21;UBERON:0001869!1.15e-07!21;UBERON:0000203!1.15e-07!21;UBERON:0003133!1.43e-07!24;UBERON:0004176!2.52e-07!17;UBERON:0009196!2.52e-07!17;UBERON:0009117!2.52e-07!17;UBERON:0007811!4.63e-07!86;UBERON:0000489!5.30e-07!21;UBERON:0002619!5.74e-07!17;UBERON:0003135!6.61e-07!15;UBERON:0000468!9.15e-07!333;UBERON:0003101!9.85e-07!16;UBERON:0000079!9.85e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.28e-17,54;UBERON:0002346,2.03e-17,64;UBERON:0003075,2.03e-17,64;UBERON:0007284,2.03e-17,64;UBERON:0001049,1.89e-16,52;UBERON:0005068,1.89e-16,52;UBERON:0006241,1.89e-16,52;UBERON:0007135,1.89e-16,52;UBERON:0001017,7.57e-16,73;UBERON:0000955,1.02e-15,47;UBERON:0006238,1.02e-15,47;UBERON:0001016,5.88e-15,75;UBERON:0002616,7.46e-15,46;UBERON:0010371,4.75e-14,73;UBERON:0003056,7.85e-14,49;UBERON:0004121,8.87e-13,95;UBERON:0000924,8.87e-13,95;UBERON:0006601,8.87e-13,95;UBERON:0002020,1.71e-12,34;UBERON:0003080,3.35e-12,40;UBERON:0010314,7.77e-12,92;UBERON:0003528,7.97e-12,29;UBERON:0002791,7.97e-12,29;UBERON:0001893,7.97e-12,29;UBERON:0002780,1.96e-11,39;UBERON:0001890,1.96e-11,39;UBERON:0006240,1.96e-11,39;UBERON:0000991,1.39e-09,18;UBERON:0005564,1.39e-09,18;UBERON:0003886,1.61e-09,38;UBERON:0002323,4.22e-09,37;UBERON:0004458,4.22e-09,37;UBERON:0002553,4.81e-09,39;UBERON:0004176,7.59e-09,17;UBERON:0009196,7.59e-09,17;UBERON:0009117,7.59e-09,17;UBERON:0005156,9.41e-09,26;UBERON:0000990,9.41e-09,26;UBERON:0003133,1.46e-08,24;UBERON:0003135,2.89e-08,15;UBERON:0000489,4.67e-08,21;UBERON:0000473,7.88e-08,14;UBERON:0002619,1.80e-07,17;UBERON:0003101,1.82e-07,16;UBERON:0000079,1.82e-07,16;UBERON:0000956,3.36e-07,21;UBERON:0001869,3.36e-07,21;UBERON:0000203,3.36e-07,21 | |||
|phase1_expression=1.92178616525753,0,0,0.30246421130683,0,0.671517087647559,0.934450562382103,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,3.05235218932625,2.63623419281366,3.4997381833371,0.419959264876088,0,0,0,0,0,0,0,2.42779753031517,1.05798195854407,2.53532561402472,0,0,0,0,0,1.49800055259202,0.768436610643109,0.725827286159344,0.945041568321835,1.26194976810829,1.14260393761521,0.662605622854841,1.22490799214954,1.53352753629178,0.919218786610021,2.20231761998777,4.21368215681119,2.61131106535614,2.50583946687368,2.10421580285542,2.08365348222704,1.95428099300967,3.37657566019008,3.36156145108982,1.47314292736834,1.42371680799103,2.42319279572891,0.454357159999104,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.79928715803342,0,1.7813056687779,1.04091196059682,0.304465478312141,1.15307748628029,0.60289056221049,2.11659672844269,0.502666365318702,0.741584903203122,0.289198713839823,0,0,0,0,0,5.27005434620785,4.39838084308256,0.766371165625774,0,0,0,4.6435098215495,5.03250663100489,2.76439574648302,4.69325664519146,3.3243009452943,4.36354893575076,3.24482526135515,4.48093200941392,1.11966273549084,2.0217820674694,1.05220927943237,0.780722657776222,0.919608417733892,2.52086981727489,1.05493372485001,2.17716797284249,1.15302348256365,1.87403449119458,3.62184719034622,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0.205782136407943,3.38358253591438,0,0,0,0,0.938104239924385,0.540186184383045,0.473489471170421,0.787056926989615,0,0.232533944750408,0,0.116765342367169,0.493679549740441,0.492502392237286,1.05389452409612,1.31579988682799,1.75640092232841,0.939444931322602,3.57492912559016,2.88132914661996,0,0,2.55945900642281,2.32236671860439,2.31961430379768,2.42020229548011,2.66853652613844,0.190225626112559,0,0.988193728344065,1.00534083520108,0.994782360205754,1.16978452271472,0,0.432276099749388,0.199141273254367,0.379335801906163,1.14248512609729,3.38123207019241,1.83286195060783,1.35766741017338,1.8936671370386,6.13394410105296,1.91893192373483,1.09899109488962,1.48076596706161,0,0.166845105716094,0.786235980452812,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.37898282354097,0,0,0,0,0,0.195133647857799,0.157635144106191,0.8858587585951,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,1.9266070798535,2.57865710502847,0,0,0.631016438832513,0.390438744296638,1.29254038639679,0,0.445597348164788,0.566153061577665,0,0,0,13.4954952897159,3.12268187458191,1.06839362200353,1.30309567482861,6.92874516484649,3.98235415019888,0.728341908464944,1.81394134178851,1.50884063804718,1.47650946440386,1.22974059177571,0.258428293168221,1.81766864738753,1.42598951353889,0.632073515871632,1.05418608574999,5.15677716240934,2.7235168460303,0.720244376125241,0.776152102696527,0.857348140126369,0.886701168211368,1.60531935841864,1.48094118541909,0.608929898229199,2.58138878870081,0,0.661585194164886,0.16488625294148,0,0.180938774784468,0,0.164140899745061,0.582961673259701,3.52308073819968,0.170870880797853,1.03193433981611,0.555583582109135,0.188368457004691,0.27338845544205,0,0.339956859987711,0.419854356970974,0.276399947608848,0,3.32152793260192,3.45643094115643,3.34816556547584,2.92723614420256,2.18362563746178,2.56242258131159,2.47960367176008,0,1.42576470620972,0,0.56369293868419,1.49516546043979,2.81279433777066,4.083474955225,2.71235629303235,3.21016638432478,3.0512882047896,4.4269490846943,5.24296722128554,1.93267296660805,1.15212002503146,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,3.47741269257943,0.563047426353546,0.73260649706906,1.07184189539533,1.50471631210609,3.95326289831947,3.22227665555024,1.14579102687879,2.06223818812425,2.74033007908257,0.755393897389701,2.70009000092722,1.35096360967266,3.62513927187364,1.03552062350364,0.31136204275253,0.798049746802062,0.853668028770671,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,0.749132059759059,0.640251524048693,0.459483751644906,0.952587382566147,1.0429589335037,0.578727661391115,0,0.294397840268795,1.37147700954166,0.177475806159338,1.1921809497366,0.581385666529314,0.376437521661322,1.18460451048347,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,1.0835493061312,0,0.464810523557898,0.771626443924566,0.749431733813838,0.233931608445408,0.859484216193193,0.191288332068843,0,0.463735671240843 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|phase1_expression=1.92178616525753,0,0,0.30246421130683,0,0.671517087647559,0.934450562382103,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,3.05235218932625,2.63623419281366,3.4997381833371,0.419959264876088,0,0,0,0,0,0,0,2.42779753031517,1.05798195854407,2.53532561402472,0,0,0,0,0,1.49800055259202,0.768436610643109,0.725827286159344,0.945041568321835,1.26194976810829,1.14260393761521,0.662605622854841,1.22490799214954,1.53352753629178,0.919218786610021,2.20231761998777,4.21368215681119,2.61131106535614,2.50583946687368,2.10421580285542,2.08365348222704,1.95428099300967,3.37657566019008,3.36156145108982,1.47314292736834,1.42371680799103,2.42319279572891,0.454357159999104,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.79928715803342,0,1.7813056687779,1.04091196059682,0.304465478312141,1.15307748628029,0.60289056221049,2.11659672844269,0.502666365318702,0.741584903203122,0.289198713839823,0,0,0,0,0,5.27005434620785,4.39838084308256,0.766371165625774,0,0,0,4.6435098215495,5.03250663100489,2.76439574648302,4.69325664519146,3.3243009452943,4.36354893575076,3.24482526135515,4.48093200941392,1.11966273549084,2.0217820674694,1.05220927943237,0.780722657776222,0.919608417733892,2.52086981727489,1.05493372485001,2.17716797284249,1.15302348256365,1.87403449119458,3.62184719034622,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0.205782136407943,3.38358253591438,0,0,0,0,0.938104239924385,0.540186184383045,0.473489471170421,0.787056926989615,0,0.232533944750408,0,0.116765342367169,0.493679549740441,0.492502392237286,1.05389452409612,1.31579988682799,1.75640092232841,0.939444931322602,3.57492912559016,2.88132914661996,0,0,2.55945900642281,2.32236671860439,2.31961430379768,2.42020229548011,2.66853652613844,0.190225626112559,0,0.988193728344065,1.00534083520108,0.994782360205754,1.16978452271472,0,0.432276099749388,0.199141273254367,0.379335801906163,1.14248512609729,3.38123207019241,1.83286195060783,1.35766741017338,1.8936671370386,6.13394410105296,1.91893192373483,1.09899109488962,1.48076596706161,0,0.166845105716094,0.786235980452812,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.37898282354097,0,0,0,0,0,0.195133647857799,0.157635144106191,0.8858587585951,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,1.9266070798535,2.57865710502847,0,0,0.631016438832513,0.390438744296638,1.29254038639679,0,0.445597348164788,0.566153061577665,0,0,0,13.4954952897159,3.12268187458191,1.06839362200353,1.30309567482861,6.92874516484649,3.98235415019888,0.728341908464944,1.81394134178851,1.50884063804718,1.47650946440386,1.22974059177571,0.258428293168221,1.81766864738753,1.42598951353889,0.632073515871632,1.05418608574999,5.15677716240934,2.7235168460303,0.720244376125241,0.776152102696527,0.857348140126369,0.886701168211368,1.60531935841864,1.48094118541909,0.608929898229199,2.58138878870081,0,0.661585194164886,0.16488625294148,0,0.180938774784468,0,0.164140899745061,0.582961673259701,3.52308073819968,0.170870880797853,1.03193433981611,0.555583582109135,0.188368457004691,0.27338845544205,0,0.339956859987711,0.419854356970974,0.276399947608848,0,3.32152793260192,3.45643094115643,3.34816556547584,2.92723614420256,2.18362563746178,2.56242258131159,2.47960367176008,0,1.42576470620972,0,0.56369293868419,1.49516546043979,2.81279433777066,4.083474955225,2.71235629303235,3.21016638432478,3.0512882047896,4.4269490846943,5.24296722128554,1.93267296660805,1.15212002503146,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,3.47741269257943,0.563047426353546,0.73260649706906,1.07184189539533,1.50471631210609,3.95326289831947,3.22227665555024,1.14579102687879,2.06223818812425,2.74033007908257,0.755393897389701,2.70009000092722,1.35096360967266,3.62513927187364,1.03552062350364,0.31136204275253,0.798049746802062,0.853668028770671,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,0.749132059759059,0.640251524048693,0.459483751644906,0.952587382566147,1.0429589335037,0.578727661391115,0,0.294397840268795,1.37147700954166,0.177475806159338,1.1921809497366,0.581385666529314,0.376437521661322,1.18460451048347,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,1.0835493061312,0,0.464810523557898,0.771626443924566,0.749431733813838,0.233931608445408,0.859484216193193,0.191288332068843,0,0.463735671240843 | ||
|short_description=p4@Kcnd3 | |||
}} | }} |
Latest revision as of 06:02, 27 September 2015
Short description: | p4@Kcnd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Kcnd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2356 |
Association with transcript: | -152bp_to_ENSMUST00000098761, NM_001039347, uc008qux.1, uc008quy.1_5end |
EntrezGene: | Kcnd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.72e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.72e-07 | 23 |