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FFCP PHASE1:Mm9::chr3:109946704..109946760,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=80883
|EntrezGene=80883
|HGNC=
|HGNC=
|MCL_coexpression_id=1191
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=168bp_to_uc008ras.1_5end
|association_with_transcript=168bp_to_uc008ras.1_5end
|cluster_id=chr3:109946704..109946760,-
|description=CAGE_peak_1_at_Ntng1_5end
|description=CAGE_peak_1_at_Ntng1_5end
|id=chr3:109946704..109946760,-
|id=chr3:109946704..109946760,-
|ontology_enrichment_celltype=CL:0000540!1.73e-12!33;CL:0000047!1.73e-12!33;CL:0000031!1.73e-12!33;CL:0000404!1.73e-12!33;CL:0000221!4.17e-11!44;CL:0000133!4.17e-11!44;CL:0002319!1.23e-10!43;CL:0000117!2.90e-10!23;CL:0000337!2.90e-10!23;CL:0000393!5.48e-08!39;CL:0000211!5.48e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000540,1.70e-13,33;CL:0000047,1.70e-13,33;CL:0000031,1.70e-13,33;CL:0000404,1.70e-13,33;CL:0000221,8.07e-12,44;CL:0000133,8.07e-12,44;CL:0002319,2.77e-11,43;CL:0000117,7.67e-11,23;CL:0000337,7.67e-11,23;CL:0000393,1.56e-09,39;CL:0000211,1.56e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.08e-28!102;UBERON:0000924!2.08e-28!102;UBERON:0006601!2.08e-28!102;UBERON:0001017!8.25e-27!73;UBERON:0005743!8.25e-27!73;UBERON:0000073!2.18e-26!75;UBERON:0001016!2.18e-26!75;UBERON:0002346!8.48e-25!71;UBERON:0003075!8.48e-25!71;UBERON:0007284!8.48e-25!71;UBERON:0000033!8.08e-23!63;UBERON:0001049!6.01e-21!52;UBERON:0005068!6.01e-21!52;UBERON:0006241!6.01e-21!52;UBERON:0007135!6.01e-21!52;UBERON:0000955!4.51e-20!50;UBERON:0006238!4.51e-20!50;UBERON:0002616!2.45e-19!49;UBERON:0003056!8.14e-18!49;UBERON:0003080!1.97e-15!40;UBERON:0002020!8.78e-15!34;UBERON:0002780!9.46e-15!39;UBERON:0001890!9.46e-15!39;UBERON:0006240!9.46e-15!39;UBERON:0000153!4.87e-12!94;UBERON:0002791!8.10e-12!29;UBERON:0003528!8.10e-12!29;UBERON:0001893!8.10e-12!29;UBERON:0007811!5.33e-10!86;UBERON:0000468!1.68e-07!333;UBERON:0000956!2.47e-07!21;UBERON:0001869!2.47e-07!21;UBERON:0000203!2.47e-07!21;UBERON:0002619!5.85e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.24e-30,73;UBERON:0004121,6.86e-30,95;UBERON:0000924,6.86e-30,95;UBERON:0006601,6.86e-30,95;UBERON:0001016,1.74e-29,75;UBERON:0002346,6.26e-28,64;UBERON:0003075,6.26e-28,64;UBERON:0007284,6.26e-28,64;UBERON:0010371,1.10e-25,73;UBERON:0000073,1.76e-25,54;UBERON:0001049,1.29e-23,52;UBERON:0005068,1.29e-23,52;UBERON:0006241,1.29e-23,52;UBERON:0007135,1.29e-23,52;UBERON:0000955,5.32e-20,47;UBERON:0006238,5.32e-20,47;UBERON:0003056,9.94e-20,49;UBERON:0002616,3.59e-19,46;UBERON:0003080,6.38e-17,40;UBERON:0010314,8.69e-17,92;UBERON:0002780,3.91e-16,39;UBERON:0001890,3.91e-16,39;UBERON:0006240,3.91e-16,39;UBERON:0002020,4.08e-16,34;UBERON:0003528,1.10e-12,29;UBERON:0002791,1.10e-12,29;UBERON:0001893,1.10e-12,29;UBERON:0002619,1.38e-07,17;UBERON:0000956,1.51e-07,21;UBERON:0001869,1.51e-07,21;UBERON:0000203,1.51e-07,21;UBERON:0003076,2.34e-07,12;UBERON:0003057,2.34e-07,12;UBERON:0002021,2.35e-07,10;UBERON:0000411,2.35e-07,10;UBERON:0001950,2.35e-07,10;UBERON:0002420,6.57e-07,8;UBERON:0007245,6.57e-07,8;UBERON:0010009,6.57e-07,8;UBERON:0010011,6.57e-07,8;UBERON:0000454,6.57e-07,8
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2703773457067,3.51497892375155,3.88859798148567,1.81982348112971,0,0,0,0,0,0,0,9.3065571995415,11.6378015439847,8.87363964908651,0,0,0,0,0,0,0.768436610643109,1.24427534770173,2.02508907497536,0.630974884054146,9.14083150092171,8.61387309711293,2.44981598429908,0.670918297127655,0,40.7428759697738,52.0964339387566,43.0098293117482,22.1568963386726,25.7995154958795,28.129322010065,15.9134309430787,14.069065250792,16.5022107598955,13.258286346315,13.3829379951157,11.7431650869939,0.302904773332736,1.058001841495,0,0,0,0,0,0,0.702222100658759,0,0,0,5.7745802108439,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.5709193985953,0.258937883647172,1.1875371125186,2.4287945747259,1.82679286987285,1.38369298353635,1.65794904607885,1.99900802130698,0.502666365318702,0,0.144599356919912,0,1.94120219936891,0.441683036920787,0,0,7.90508151931177,6.28340120440365,0,0,0,0,24.4158742229861,6.8625090422794,2.63874139437015,13.5582969749976,11.5071955798649,40.9342447782333,21.5780879880118,1.93494791315601,0.124406970610093,0.505445516867349,5.05060454127538,1.69156575851515,2.98872735763515,3.06105620669094,3.0140963567143,4.62648194229029,1.7935920839879,1.68663104207512,5.69147415625834,0.862271971731369,2.45837904218165,8.44565395986955,3.5071317188412,8.89751197521913,4.87553033131033,4.32142486456681,1.79130840136644,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0.329119699826961,0.32833492815819,0.0810688095458557,0,0,0,15.1408762966172,4.52780294468852,0,0,1.06644125267617,3.25131340604614,1.28867461322093,1.61346819698674,0.444756087689741,0.760902504450237,0,0.988193728344065,0.502670417600539,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0,0.758671603812327,1.02823661348756,1.1270773567308,1.01825663922657,0.969762435838129,1.47285221769669,0.252946148497029,0.442830443938806,0.156998727841375,0.246794327843601,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,2.08440552947533,1.95557971730431,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0.585400943573396,0,0,0,0.163863314715738,0.345369963731791,0,0,0,2.45882136509518,1.10374698521893,13.4862495589745,10.9006868530749,0,1.51482556322624,2.83957397474631,2.34263246577983,6.46270193198397,1.67278158566786,1.33679204449436,3.96307143104365,3.23848561339915,4.9683495844923,4.34816555741176,31.8108103257589,2.2710413633323,1.78065603667255,1.62886959353576,2.47455184458803,0,0.485561272309963,0.906970670894253,0.565815239267694,0,0.307435147943927,0,1.09060118843252,0,0,0,0,1.36175842301515,5.04171063287669,2.19909762430683,2.7863814554107,4.07882537377229,3.38900753443934,2.46823530903181,1.2178597964584,0,0,0.220528398054962,0.32977250588296,1.29171541356724,0.301564624640779,0.954978752025092,0,0.291480836629851,15.0194494628513,0,2.27025554759545,0.370389054739423,0.565105371014073,0,0,0.169978429993855,0,0,0,4.11236791655476,2.43983360552218,1.83609079397062,2.09088296014469,1.9652630737156,0.674321731924103,0.743881101528023,0.26175594198403,0.388844919875379,1.86401793926078,0,3.73791365109947,2.31641886639937,1.16670713006429,0.129159823477731,0.506868376472335,0.58678619322877,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0.405450430580328,0.308132871494482,0.129920822977795,0,0,0,0,0.100966449948148,0.228620419965,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,1.09890974560359,0.857473516316263,0,5.64751842617067,5.06357760157895,4.58316410751517,7.90524638780963,5.48066015816514,5.2877572817279,7.42524750254986,13.0593148935024,9.9691329976525,12.9440077937955,0.830298780673413,1.99512436700516,3.75613932659095,4.86213434136588,3.14419743941973,1.2869045591501,2.22246727801615,2.88449080134452,4.49286893428541,2.27427490587418,3.54871019846336,2.26351609663291,2.24739617927718,4.1616349063165,3.27382173046996,1.90517476513229,4.1718357340148,2.50781986602817,2.47251540481984,2.06078488188156,3.08582327146874,3.37204031702741,2.14592570952589,2.90692833264657,3.29382831453657,3.38458431566706,4.024415403201,3.15683653725411,2.98769050460896,2.24456908663095,2.25406534435931,3.34915240076916,2.86461730218783,3.25367366490529,4.82266527452853,4.99621155875892,1.87145286756327,3.86767897286937,2.48674831689496,1.76473135295612,1.39120701372253
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2703773457067,3.51497892375155,3.88859798148567,1.81982348112971,0,0,0,0,0,0,0,9.3065571995415,11.6378015439847,8.87363964908651,0,0,0,0,0,0,0.768436610643109,1.24427534770173,2.02508907497536,0.630974884054146,9.14083150092171,8.61387309711293,2.44981598429908,0.670918297127655,0,40.7428759697738,52.0964339387566,43.0098293117482,22.1568963386726,25.7995154958795,28.129322010065,15.9134309430787,14.069065250792,16.5022107598955,13.258286346315,13.3829379951157,11.7431650869939,0.302904773332736,1.058001841495,0,0,0,0,0,0,0.702222100658759,0,0,0,5.7745802108439,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.5709193985953,0.258937883647172,1.1875371125186,2.4287945747259,1.82679286987285,1.38369298353635,1.65794904607885,1.99900802130698,0.502666365318702,0,0.144599356919912,0,1.94120219936891,0.441683036920787,0,0,7.90508151931177,6.28340120440365,0,0,0,0,24.4158742229861,6.8625090422794,2.63874139437015,13.5582969749976,11.5071955798649,40.9342447782333,21.5780879880118,1.93494791315601,0.124406970610093,0.505445516867349,5.05060454127538,1.69156575851515,2.98872735763515,3.06105620669094,3.0140963567143,4.62648194229029,1.7935920839879,1.68663104207512,5.69147415625834,0.862271971731369,2.45837904218165,8.44565395986955,3.5071317188412,8.89751197521913,4.87553033131033,4.32142486456681,1.79130840136644,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0.329119699826961,0.32833492815819,0.0810688095458557,0,0,0,15.1408762966172,4.52780294468852,0,0,1.06644125267617,3.25131340604614,1.28867461322093,1.61346819698674,0.444756087689741,0.760902504450237,0,0.988193728344065,0.502670417600539,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0,0.758671603812327,1.02823661348756,1.1270773567308,1.01825663922657,0.969762435838129,1.47285221769669,0.252946148497029,0.442830443938806,0.156998727841375,0.246794327843601,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,2.08440552947533,1.95557971730431,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0.585400943573396,0,0,0,0.163863314715738,0.345369963731791,0,0,0,2.45882136509518,1.10374698521893,13.4862495589745,10.9006868530749,0,1.51482556322624,2.83957397474631,2.34263246577983,6.46270193198397,1.67278158566786,1.33679204449436,3.96307143104365,3.23848561339915,4.9683495844923,4.34816555741176,31.8108103257589,2.2710413633323,1.78065603667255,1.62886959353576,2.47455184458803,0,0.485561272309963,0.906970670894253,0.565815239267694,0,0.307435147943927,0,1.09060118843252,0,0,0,0,1.36175842301515,5.04171063287669,2.19909762430683,2.7863814554107,4.07882537377229,3.38900753443934,2.46823530903181,1.2178597964584,0,0,0.220528398054962,0.32977250588296,1.29171541356724,0.301564624640779,0.954978752025092,0,0.291480836629851,15.0194494628513,0,2.27025554759545,0.370389054739423,0.565105371014073,0,0,0.169978429993855,0,0,0,4.11236791655476,2.43983360552218,1.83609079397062,2.09088296014469,1.9652630737156,0.674321731924103,0.743881101528023,0.26175594198403,0.388844919875379,1.86401793926078,0,3.73791365109947,2.31641886639937,1.16670713006429,0.129159823477731,0.506868376472335,0.58678619322877,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0.405450430580328,0.308132871494482,0.129920822977795,0,0,0,0,0.100966449948148,0.228620419965,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,1.09890974560359,0.857473516316263,0,5.64751842617067,5.06357760157895,4.58316410751517,7.90524638780963,5.48066015816514,5.2877572817279,7.42524750254986,13.0593148935024,9.9691329976525,12.9440077937955,0.830298780673413,1.99512436700516,3.75613932659095,4.86213434136588,3.14419743941973,1.2869045591501,2.22246727801615,2.88449080134452,4.49286893428541,2.27427490587418,3.54871019846336,2.26351609663291,2.24739617927718,4.1616349063165,3.27382173046996,1.90517476513229,4.1718357340148,2.50781986602817,2.47251540481984,2.06078488188156,3.08582327146874,3.37204031702741,2.14592570952589,2.90692833264657,3.29382831453657,3.38458431566706,4.024415403201,3.15683653725411,2.98769050460896,2.24456908663095,2.25406534435931,3.34915240076916,2.86461730218783,3.25367366490529,4.82266527452853,4.99621155875892,1.87145286756327,3.86767897286937,2.48674831689496,1.76473135295612,1.39120701372253
|short_description=p1@Ntng1
|short_description=p1@Ntng1
}}
}}

Latest revision as of 08:28, 27 September 2015

Short description:p1@Ntng1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ntng1_5end
Coexpression cluster:MCL_coexpression_mm9:1191
Association with transcript: 168bp_to_uc008ras.1_5end
EntrezGene:Ntng1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ntng1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D340.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F352.10
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.01
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.26
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.74
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A424.42
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F240.93
diencephalon, neonate N30.CNhs11201.1388-42B221.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C64.63
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E28.45
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E78.90
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E815.14
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C213.49
medulla oblongata, neonate N30.CNhs11200.1396-42A310.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I931.81
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E65.04
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C915.02
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.70e-1333
neuronal stem cell1.70e-1333
neuroblast1.70e-1333
electrically signaling cell1.70e-1333
ectodermal cell8.07e-1244
neurectodermal cell8.07e-1244
neural cell2.77e-1143
CNS neuron (sensu Vertebrata)7.67e-1123
neuroblast (sensu Vertebrata)7.67e-1123
electrically responsive cell1.56e-0939
electrically active cell1.56e-0939

Uber anatomy
Ontology termp-valuen
central nervous system2.24e-3073
ectoderm-derived structure6.86e-3095
ectoderm6.86e-3095
presumptive ectoderm6.86e-3095
nervous system1.74e-2975
neurectoderm6.26e-2864
neural plate6.26e-2864
presumptive neural plate6.26e-2864
ecto-epithelium1.10e-2573
regional part of nervous system1.76e-2554
neural tube1.29e-2352
neural rod1.29e-2352
future spinal cord1.29e-2352
neural keel1.29e-2352
brain5.32e-2047
future brain5.32e-2047
pre-chordal neural plate9.94e-2049
regional part of brain3.59e-1946
anterior neural tube6.38e-1740
structure with developmental contribution from neural crest8.69e-1792
regional part of forebrain3.91e-1639
forebrain3.91e-1639
future forebrain3.91e-1639
gray matter4.08e-1634
brain grey matter1.10e-1229
regional part of telencephalon1.10e-1229
telencephalon1.10e-1229
regional part of cerebral cortex1.38e-0717
cerebral cortex1.51e-0721
cerebral hemisphere1.51e-0721
pallium1.51e-0721
posterior neural tube2.34e-0712
chordal neural plate2.34e-0712
occipital lobe2.35e-0710
visual cortex2.35e-0710
neocortex2.35e-0710
basal ganglion6.57e-078
nuclear complex of neuraxis6.57e-078
aggregate regional part of brain6.57e-078
collection of basal ganglia6.57e-078
cerebral subcortex6.57e-078
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