Personal tools

FFCP PHASE1:Mm9::chr11:41813786..41813844,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14406
|EntrezGene=14406
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q3UVW2,Q8C8H5
|UniProt=Q3UVW2,Q8C8H5
|association_with_transcript=0bp_to_ENSMUST00000109292,ENSMUST00000163704,NM_177408_5end
|association_with_transcript=0bp_to_ENSMUST00000109292,ENSMUST00000163704,NM_177408_5end
|cluster_id=chr11:41813786..41813844,-
|description=CAGE_peak_1_at_Gabrg2_5end
|description=CAGE_peak_1_at_Gabrg2_5end
|id=chr11:41813786..41813844,-
|id=chr11:41813786..41813844,-
|ontology_enrichment_celltype=CL:0000117!2.38e-13!23;CL:0000337!2.38e-13!23;CL:0000540!7.78e-13!33;CL:0000047!7.78e-13!33;CL:0000031!7.78e-13!33;CL:0000404!7.78e-13!33;CL:0002319!3.33e-09!43;CL:0000393!3.65e-09!39;CL:0000211!3.65e-09!39;CL:0000221!9.60e-09!44;CL:0000133!9.60e-09!44
|ontology_enrichment_celltype=CL:0000117!2.38e-13!23;CL:0000337!2.38e-13!23;CL:0000540!7.78e-13!33;CL:0000047!7.78e-13!33;CL:0000031!7.78e-13!33;CL:0000404!7.78e-13!33;CL:0002319!3.33e-09!43;CL:0000393!3.65e-09!39;CL:0000211!3.65e-09!39;CL:0000221!9.60e-09!44;CL:0000133!9.60e-09!44
|ontology_enrichment_celltype_v019_2=CL:0000117,3.48e-16,23;CL:0000337,3.48e-16,23;CL:0000540,1.31e-10,33;CL:0000047,1.31e-10,33;CL:0000031,1.31e-10,33;CL:0000404,1.31e-10,33;CL:0000393,7.58e-08,39;CL:0000211,7.58e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.59e-30!71;UBERON:0003075!2.59e-30!71;UBERON:0007284!2.59e-30!71;UBERON:0000073!5.20e-29!75;UBERON:0001016!5.20e-29!75;UBERON:0001017!1.61e-28!73;UBERON:0005743!1.61e-28!73;UBERON:0004121!5.64e-28!102;UBERON:0000924!5.64e-28!102;UBERON:0006601!5.64e-28!102;UBERON:0000033!1.06e-25!63;UBERON:0001049!2.21e-25!52;UBERON:0005068!2.21e-25!52;UBERON:0006241!2.21e-25!52;UBERON:0007135!2.21e-25!52;UBERON:0000955!1.05e-24!50;UBERON:0006238!1.05e-24!50;UBERON:0003056!4.01e-24!49;UBERON:0002616!7.74e-24!49;UBERON:0003080!5.20e-20!40;UBERON:0002020!3.34e-19!34;UBERON:0002780!4.16e-19!39;UBERON:0001890!4.16e-19!39;UBERON:0006240!4.16e-19!39;UBERON:0002791!2.85e-16!29;UBERON:0003528!2.85e-16!29;UBERON:0001893!2.85e-16!29;UBERON:0007811!5.54e-14!86;UBERON:0000153!4.73e-11!94;UBERON:0000956!5.17e-11!21;UBERON:0001869!5.17e-11!21;UBERON:0000203!5.17e-11!21;UBERON:0002619!1.69e-09!17;UBERON:0002021!1.92e-09!10;UBERON:0000411!1.92e-09!10;UBERON:0001950!1.92e-09!10
|ontology_enrichment_uberon=UBERON:0002346!2.59e-30!71;UBERON:0003075!2.59e-30!71;UBERON:0007284!2.59e-30!71;UBERON:0000073!5.20e-29!75;UBERON:0001016!5.20e-29!75;UBERON:0001017!1.61e-28!73;UBERON:0005743!1.61e-28!73;UBERON:0004121!5.64e-28!102;UBERON:0000924!5.64e-28!102;UBERON:0006601!5.64e-28!102;UBERON:0000033!1.06e-25!63;UBERON:0001049!2.21e-25!52;UBERON:0005068!2.21e-25!52;UBERON:0006241!2.21e-25!52;UBERON:0007135!2.21e-25!52;UBERON:0000955!1.05e-24!50;UBERON:0006238!1.05e-24!50;UBERON:0003056!4.01e-24!49;UBERON:0002616!7.74e-24!49;UBERON:0003080!5.20e-20!40;UBERON:0002020!3.34e-19!34;UBERON:0002780!4.16e-19!39;UBERON:0001890!4.16e-19!39;UBERON:0006240!4.16e-19!39;UBERON:0002791!2.85e-16!29;UBERON:0003528!2.85e-16!29;UBERON:0001893!2.85e-16!29;UBERON:0007811!5.54e-14!86;UBERON:0000153!4.73e-11!94;UBERON:0000956!5.17e-11!21;UBERON:0001869!5.17e-11!21;UBERON:0000203!5.17e-11!21;UBERON:0002619!1.69e-09!17;UBERON:0002021!1.92e-09!10;UBERON:0000411!1.92e-09!10;UBERON:0001950!1.92e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.17e-32,64;UBERON:0003075,5.17e-32,64;UBERON:0007284,5.17e-32,64;UBERON:0000073,6.29e-32,54;UBERON:0001049,6.38e-30,52;UBERON:0005068,6.38e-30,52;UBERON:0006241,6.38e-30,52;UBERON:0007135,6.38e-30,52;UBERON:0001017,7.28e-28,73;UBERON:0003056,3.51e-27,49;UBERON:0001016,1.32e-26,75;UBERON:0000955,3.72e-26,47;UBERON:0006238,3.72e-26,47;UBERON:0010371,1.01e-25,73;UBERON:0004121,2.52e-25,95;UBERON:0000924,2.52e-25,95;UBERON:0006601,2.52e-25,95;UBERON:0002616,4.09e-25,46;UBERON:0002020,7.66e-24,34;UBERON:0003080,6.60e-23,40;UBERON:0002780,8.32e-22,39;UBERON:0001890,8.32e-22,39;UBERON:0006240,8.32e-22,39;UBERON:0003528,3.41e-20,29;UBERON:0002791,3.41e-20,29;UBERON:0001893,3.41e-20,29;UBERON:0010314,2.35e-17,92;UBERON:0000956,1.21e-13,21;UBERON:0001869,1.21e-13,21;UBERON:0000203,1.21e-13,21;UBERON:0002619,8.99e-12,17;UBERON:0002021,2.44e-11,10;UBERON:0000411,2.44e-11,10;UBERON:0001950,2.44e-11,10;UBERON:0002420,8.22e-08,8;UBERON:0007245,8.22e-08,8;UBERON:0010009,8.22e-08,8;UBERON:0010011,8.22e-08,8;UBERON:0000454,8.22e-08,8;UBERON:0003076,2.13e-07,12;UBERON:0003057,2.13e-07,12
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7945671233864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68802551266472,7.93486468908049,6.33831403506179,0,0,0,0,0,0.299600110518405,0,2.90330914463737,1.21505344498522,1.68259969081106,4.28476476605705,4.8591079009355,4.89963196859816,1.53352753629178,2.75765635983006,38.540558349786,59.1192375334419,66.8188419664659,7.51751840062105,7.593474419,11.9810075228055,36.0146068711781,52.3369227329462,36.213184723104,15.3206864446307,25.4845308630394,13.4207600994216,0.605809546665472,0.831287161174641,0,0,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,1.03909497345377,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.587943535678524,0.251333182659351,0,0,0,0,0,0.484875253135222,0,66.4612409216212,92.1565509979202,0,0,0,0,105.90198205921,43.4625572677695,20.4816593943969,101.339578672097,92.5689955535797,75.8426362642394,71.7106382759489,0,0,0,5.89237196482127,0.130120442962704,2.06911893990126,2.16074555766419,4.52114453507145,5.10273743634959,8.07116437794554,6.46541899462129,18.1092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.1159794256509,27.2697222805104,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,53.1422452859591,63.6459458195663,0,0,0.315508219416257,0,0.646270193198397,0.716906393857656,1.11399337041197,0.849229592366497,1.21443210502468,0.584511715822624,0.790575555893047,72.6186175113284,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,33.3630813638712,0.540183282093931,0,0.428674070063185,4.07882537377229,1.24858172321449,3.9491764944509,1.522324745573,0,0,0,0,0,0,0,0,0.291480836629851,53.9587628850583,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.495920734352016,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,50.827665835536,73.6520378411483,68.7474616127276,59.8049074556033,74.673994655,67.2300568676833,71.5523850245714,86.9119922222745,94.2536210687146,62.1312374102184,0.62272408550506,2.39414924040619,3.75613932659095,3.40349403895612,2.93458427679175,1.83843508450014,5.778414922842,4.12070114477788,2.24643446714271,3.53776096469316,5.57654459758527,5.09291121742406,5.3375659257833,4.92993673517493,4.7671439233159,7.1444053692461,5.09891034157364,5.40145817298374,4.53294490883637,3.97437084362873,3.77156177623957,3.90446773550542,6.19934093863034,4.65108533223451,4.14081273827455,4.73841804193388,3.84148743032822,5.5244639401947,4.20992752922171,3.36685362994643,2.84724043498018,3.64466584789585,2.86461730218783,2.16911577660352,2.89359916471712,4.99621155875892,3.50897412668113,4.51229213501426,2.48674831689496,1.32354851471709,1.85494268496337
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7945671233864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68802551266472,7.93486468908049,6.33831403506179,0,0,0,0,0,0.299600110518405,0,2.90330914463737,1.21505344498522,1.68259969081106,4.28476476605705,4.8591079009355,4.89963196859816,1.53352753629178,2.75765635983006,38.540558349786,59.1192375334419,66.8188419664659,7.51751840062105,7.593474419,11.9810075228055,36.0146068711781,52.3369227329462,36.213184723104,15.3206864446307,25.4845308630394,13.4207600994216,0.605809546665472,0.831287161174641,0,0,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,1.03909497345377,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.587943535678524,0.251333182659351,0,0,0,0,0,0.484875253135222,0,66.4612409216212,92.1565509979202,0,0,0,0,105.90198205921,43.4625572677695,20.4816593943969,101.339578672097,92.5689955535797,75.8426362642394,71.7106382759489,0,0,0,5.89237196482127,0.130120442962704,2.06911893990126,2.16074555766419,4.52114453507145,5.10273743634959,8.07116437794554,6.46541899462129,18.1092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.1159794256509,27.2697222805104,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,53.1422452859591,63.6459458195663,0,0,0.315508219416257,0,0.646270193198397,0.716906393857656,1.11399337041197,0.849229592366497,1.21443210502468,0.584511715822624,0.790575555893047,72.6186175113284,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,33.3630813638712,0.540183282093931,0,0.428674070063185,4.07882537377229,1.24858172321449,3.9491764944509,1.522324745573,0,0,0,0,0,0,0,0,0.291480836629851,53.9587628850583,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.495920734352016,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,50.827665835536,73.6520378411483,68.7474616127276,59.8049074556033,74.673994655,67.2300568676833,71.5523850245714,86.9119922222745,94.2536210687146,62.1312374102184,0.62272408550506,2.39414924040619,3.75613932659095,3.40349403895612,2.93458427679175,1.83843508450014,5.778414922842,4.12070114477788,2.24643446714271,3.53776096469316,5.57654459758527,5.09291121742406,5.3375659257833,4.92993673517493,4.7671439233159,7.1444053692461,5.09891034157364,5.40145817298374,4.53294490883637,3.97437084362873,3.77156177623957,3.90446773550542,6.19934093863034,4.65108533223451,4.14081273827455,4.73841804193388,3.84148743032822,5.5244639401947,4.20992752922171,3.36685362994643,2.84724043498018,3.64466584789585,2.86461730218783,2.16911577660352,2.89359916471712,4.99621155875892,3.50897412668113,4.51229213501426,2.48674831689496,1.32354851471709,1.85494268496337
|short_description=p1@Gabrg2
|short_description=p1@Gabrg2
}}
}}

Latest revision as of 12:20, 1 October 2015

Short description:p1@Gabrg2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gabrg2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000109292, ENSMUST00000163704, NM_177408_5end
EntrezGene:Gabrg2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gabrg2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D338.54
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F359.12
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D766.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.01
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E552.34
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I636.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.32
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B266.46
cerebellum, neonate N30.CNhs11135.1395-42I292.16
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4105.90
corpus striatum, adult.CNhs10487.19-21D843.46
corpus striatum, neonate N00.CNhs11226.630-43F120.48
cortex, adult.CNhs10473.12-14D5101.34
cortex, neonate N30.CNhs11107.1392-42F292.57
diencephalon, adult.CNhs10482.20-12F275.84
diencephalon, neonate N30.CNhs11201.1388-42B271.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C65.10
eyeball, neonate N01.CNhs11140.1532-43E78.07
eyeball, neonate N02.CNhs11205.1551-44G86.47
eyeball, neonate N16.CNhs11188.777-19A218.11
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E884.12
hippocampus, neonate N00.CNhs11228.627-43G127.27
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C253.14
medulla oblongata, neonate N30.CNhs11200.1396-42A363.65
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I972.62
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G833.36
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C953.96
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A150.83
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A273.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A368.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D759.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A474.67
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.23
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A671.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A786.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A894.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A962.13
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.48e-1623
neuroblast (sensu Vertebrata)3.48e-1623
neuron1.31e-1033
neuronal stem cell1.31e-1033
neuroblast1.31e-1033
electrically signaling cell1.31e-1033
electrically responsive cell7.58e-0839
electrically active cell7.58e-0839

Uber anatomy
Ontology termp-valuen
neurectoderm5.17e-3264
neural plate5.17e-3264
presumptive neural plate5.17e-3264
regional part of nervous system6.29e-3254
neural tube6.38e-3052
neural rod6.38e-3052
future spinal cord6.38e-3052
neural keel6.38e-3052
central nervous system7.28e-2873
pre-chordal neural plate3.51e-2749
nervous system1.32e-2675
brain3.72e-2647
future brain3.72e-2647
ecto-epithelium1.01e-2573
ectoderm-derived structure2.52e-2595
ectoderm2.52e-2595
presumptive ectoderm2.52e-2595
regional part of brain4.09e-2546
gray matter7.66e-2434
anterior neural tube6.60e-2340
regional part of forebrain8.32e-2239
forebrain8.32e-2239
future forebrain8.32e-2239
brain grey matter3.41e-2029
regional part of telencephalon3.41e-2029
telencephalon3.41e-2029
structure with developmental contribution from neural crest2.35e-1792
cerebral cortex1.21e-1321
cerebral hemisphere1.21e-1321
pallium1.21e-1321
regional part of cerebral cortex8.99e-1217
occipital lobe2.44e-1110
visual cortex2.44e-1110
neocortex2.44e-1110
basal ganglion8.22e-088
nuclear complex of neuraxis8.22e-088
aggregate regional part of brain8.22e-088
collection of basal ganglia8.22e-088
cerebral subcortex8.22e-088
posterior neural tube2.13e-0712
chordal neural plate2.13e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:41813786..41813844,-&oldid=4302985"