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FFCP PHASE1:Mm9::chr8:115093943..115093960,+: Difference between revisions

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(Created page with "{{FFCP |id=chr8:115093943..115093960,+ |short_description=p1@Cntnap4 |description=CAGE_peak_1_at_Cntnap4_5end |association_with_transcript=0bp_to_ENSMUST00000034225,ENSMUS...")
 
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{{FFCP
{{FFCP
|id=chr8:115093943..115093960,+
|DHSsupport=NA
|short_description=p1@Cntnap4
|DPIdataset=NA
|description=CAGE_peak_1_at_Cntnap4_5end
|association_with_transcript=0bp_to_ENSMUST00000034225,ENSMUST00000079307,ENSMUST00000118171,ENSMUST00000125196,ENSMUST00000125976,NM_130457,uc009nnj.1,uc009nnk.1,uc012glb.1_5end
|EntrezGene=170571
|EntrezGene=170571
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=Q99P47,Q8BPP6,D3YWB9
|UniProt=Q99P47,Q8BPP6,D3YWB9
|association_with_transcript=0bp_to_ENSMUST00000034225,ENSMUST00000079307,ENSMUST00000118171,ENSMUST00000125196,ENSMUST00000125976,NM_130457,uc009nnj.1,uc009nnk.1,uc012glb.1_5end
|cluster_id=chr8:115093943..115093960,+
|description=CAGE_peak_1_at_Cntnap4_5end
|id=chr8:115093943..115093960,+
|ontology_enrichment_celltype=CL:0000117!5.04e-15!23;CL:0000337!5.04e-15!23;CL:0000540!1.75e-09!33;CL:0000047!1.75e-09!33;CL:0000031!1.75e-09!33;CL:0000404!1.75e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.42e-19,23;CL:0000337,6.42e-19,23;CL:0000540,9.10e-12,33;CL:0000047,9.10e-12,33;CL:0000031,9.10e-12,33;CL:0000404,9.10e-12,33;CL:0000393,1.12e-08,39;CL:0000211,1.12e-08,39;CL:0002319,3.79e-07,43;CL:0000221,8.13e-07,44;CL:0000133,8.13e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.75e-24!52;UBERON:0005068!4.75e-24!52;UBERON:0006241!4.75e-24!52;UBERON:0007135!4.75e-24!52;UBERON:0000033!1.34e-23!63;UBERON:0000955!7.21e-23!50;UBERON:0006238!7.21e-23!50;UBERON:0002616!5.14e-22!49;UBERON:0002346!5.96e-22!71;UBERON:0003075!5.96e-22!71;UBERON:0007284!5.96e-22!71;UBERON:0001017!4.83e-21!73;UBERON:0005743!4.83e-21!73;UBERON:0000073!7.92e-21!75;UBERON:0001016!7.92e-21!75;UBERON:0003056!6.33e-20!49;UBERON:0002020!4.79e-19!34;UBERON:0003080!1.84e-18!40;UBERON:0004121!6.78e-18!102;UBERON:0000924!6.78e-18!102;UBERON:0006601!6.78e-18!102;UBERON:0002780!1.09e-17!39;UBERON:0001890!1.09e-17!39;UBERON:0006240!1.09e-17!39;UBERON:0000153!8.31e-17!94;UBERON:0002791!1.14e-15!29;UBERON:0003528!1.14e-15!29;UBERON:0001893!1.14e-15!29;UBERON:0007811!1.17e-15!86;UBERON:0000956!1.66e-10!21;UBERON:0001869!1.66e-10!21;UBERON:0000203!1.66e-10!21;UBERON:0002619!1.37e-08!17;UBERON:0002021!5.05e-08!10;UBERON:0000411!5.05e-08!10;UBERON:0001950!5.05e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.95e-32,54;UBERON:0001049,2.78e-30,52;UBERON:0005068,2.78e-30,52;UBERON:0006241,2.78e-30,52;UBERON:0007135,2.78e-30,52;UBERON:0001017,2.66e-27,73;UBERON:0002346,2.37e-26,64;UBERON:0003075,2.37e-26,64;UBERON:0007284,2.37e-26,64;UBERON:0001016,4.98e-26,75;UBERON:0000955,5.19e-26,47;UBERON:0006238,5.19e-26,47;UBERON:0002616,6.14e-25,46;UBERON:0002020,1.12e-24,34;UBERON:0003080,1.45e-22,40;UBERON:0010371,4.78e-22,73;UBERON:0002780,1.41e-21,39;UBERON:0001890,1.41e-21,39;UBERON:0006240,1.41e-21,39;UBERON:0003056,6.86e-21,49;UBERON:0003528,2.70e-20,29;UBERON:0002791,2.70e-20,29;UBERON:0001893,2.70e-20,29;UBERON:0004121,3.42e-20,95;UBERON:0000924,3.42e-20,95;UBERON:0006601,3.42e-20,95;UBERON:0010314,8.76e-14,92;UBERON:0000956,1.34e-13,21;UBERON:0001869,1.34e-13,21;UBERON:0000203,1.34e-13,21;UBERON:0002619,4.04e-11,17;UBERON:0002021,6.79e-10,10;UBERON:0000411,6.79e-10,10;UBERON:0001950,6.79e-10,10;UBERON:0003076,4.65e-08,12;UBERON:0003057,4.65e-08,12;UBERON:0002420,5.66e-08,8;UBERON:0007245,5.66e-08,8;UBERON:0010009,5.66e-08,8;UBERON:0010011,5.66e-08,8;UBERON:0000454,5.66e-08,8
|phase1_expression=7.20669811971573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28339259094552,11.6378015439847,8.23980824558033,0,0,0,0,0,0,0,5.91030790158323,3.64516033495565,3.57552434297349,8.2838785477103,8.1721360152097,7.22695715368229,5.84657373211242,3.67687514644008,7.70811166995721,12.7687338085188,14.8998337258556,11.4741070325269,10.0636407962651,11.4600941522487,16.4717969410815,12.9435400307286,19.0997809721013,17.3830865429464,14.5219114415085,8.76077395378913,0.075726193333184,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0,0,0,0.45673551887624,0,0,0.346970653532272,0.304465478312141,0.461230994512117,0,0.23517741427141,0,0,0,0,0,0,0,0,47.7232699128822,63.4623521644769,0,0,0,0,16.1773890557209,5.94750783664214,5.78010019719176,13.9059456153821,17.9000820131231,12.259494629014,14.4394724130304,0.305518091550949,0,0,1.47309299120532,0.520481771850815,0.459804208866946,1.80062129805349,1.05493372485001,0.884474488967262,0.896796041993948,1.59292931751539,3.10444044886819,0.431135985865684,0.567318240503458,2.28736461413134,2.19195732427575,3.33656699070717,0.696504333044333,0.823128545631774,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,11.9865270681553,13.7892180588241,0,0,0.639864751605702,1.39342003116263,2.44848176511977,0.80673409849337,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.799739588268102,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,15.7339578188036,19.9259867206745,0,0,0.631016438832513,0,0,0,0,0,0,0.292255857911312,0,51.4114106274891,0,0.712262414669021,0.488660878060728,0,0,4.12727081463468,7.55808892411878,3.77210159511796,1.18120757152309,0,0.516856586336442,0,0,0,0,0,6.46835250932197,0,0.129358683782755,1.50035924522115,0.532020700926821,2.85390108163313,5.10101963866575,2.74018454203139,0,0,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,8.90041449650446,0,0.82554747185289,0,0,0,0,0,0,0,0,1.26534397432454,3.25311147402958,1.08005340821801,1.67270636811575,0.655087691238533,0,1.1571483801547,1.57053565190418,0.259229946583586,0,0,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0,0,0,0,0,1.21635129174099,1.02710957164827,0.129920822977795,0.716106782669926,0.39736270956253,0.480781798079875,0.590758108698309,0.201932899896295,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9892923801925,16.5717085142584,9.16632821503035,9.6237782112465,11.6464028361009,11.3309084608455,14.8504950050997,10.3573876741571,13.5942722695261,10.8729665467882,0.207574695168353,3.19219898720825,4.43907374960749,3.16038732188782,1.46729213839588,1.47074806760011,2.889207461421,4.32673620201678,4.1719497246936,4.54854981174835,4.05566879824384,2.82939512079114,3.183811253976,3.90553429669703,4.47996657853783,1.90517476513229,3.01299247456624,4.43691207066522,2.47251540481984,2.64958056241915,3.08582327146874,2.8396128985494,4.05341522910446,3.34296758254356,4.6113596403512,3.04612588410035,2.56099162021882,2.63069711437843,4.48153575691344,1.68342681497322,3.08451047122853,3.84167481264697,4.91077251803627,3.25367366490529,2.50778594275484,7.49431733813838,3.74290573512653,1.93383948643468,1.53030665655075,0.882365676478062,0.463735671240843
|phase1_expression=7.20669811971573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28339259094552,11.6378015439847,8.23980824558033,0,0,0,0,0,0,0,5.91030790158323,3.64516033495565,3.57552434297349,8.2838785477103,8.1721360152097,7.22695715368229,5.84657373211242,3.67687514644008,7.70811166995721,12.7687338085188,14.8998337258556,11.4741070325269,10.0636407962651,11.4600941522487,16.4717969410815,12.9435400307286,19.0997809721013,17.3830865429464,14.5219114415085,8.76077395378913,0.075726193333184,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0,0,0,0.45673551887624,0,0,0.346970653532272,0.304465478312141,0.461230994512117,0,0.23517741427141,0,0,0,0,0,0,0,0,47.7232699128822,63.4623521644769,0,0,0,0,16.1773890557209,5.94750783664214,5.78010019719176,13.9059456153821,17.9000820131231,12.259494629014,14.4394724130304,0.305518091550949,0,0,1.47309299120532,0.520481771850815,0.459804208866946,1.80062129805349,1.05493372485001,0.884474488967262,0.896796041993948,1.59292931751539,3.10444044886819,0.431135985865684,0.567318240503458,2.28736461413134,2.19195732427575,3.33656699070717,0.696504333044333,0.823128545631774,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,11.9865270681553,13.7892180588241,0,0,0.639864751605702,1.39342003116263,2.44848176511977,0.80673409849337,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.799739588268102,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,15.7339578188036,19.9259867206745,0,0,0.631016438832513,0,0,0,0,0,0,0.292255857911312,0,51.4114106274891,0,0.712262414669021,0.488660878060728,0,0,4.12727081463468,7.55808892411878,3.77210159511796,1.18120757152309,0,0.516856586336442,0,0,0,0,0,6.46835250932197,0,0.129358683782755,1.50035924522115,0.532020700926821,2.85390108163313,5.10101963866575,2.74018454203139,0,0,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,8.90041449650446,0,0.82554747185289,0,0,0,0,0,0,0,0,1.26534397432454,3.25311147402958,1.08005340821801,1.67270636811575,0.655087691238533,0,1.1571483801547,1.57053565190418,0.259229946583586,0,0,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0,0,0,0,0,1.21635129174099,1.02710957164827,0.129920822977795,0.716106782669926,0.39736270956253,0.480781798079875,0.590758108698309,0.201932899896295,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9892923801925,16.5717085142584,9.16632821503035,9.6237782112465,11.6464028361009,11.3309084608455,14.8504950050997,10.3573876741571,13.5942722695261,10.8729665467882,0.207574695168353,3.19219898720825,4.43907374960749,3.16038732188782,1.46729213839588,1.47074806760011,2.889207461421,4.32673620201678,4.1719497246936,4.54854981174835,4.05566879824384,2.82939512079114,3.183811253976,3.90553429669703,4.47996657853783,1.90517476513229,3.01299247456624,4.43691207066522,2.47251540481984,2.64958056241915,3.08582327146874,2.8396128985494,4.05341522910446,3.34296758254356,4.6113596403512,3.04612588410035,2.56099162021882,2.63069711437843,4.48153575691344,1.68342681497322,3.08451047122853,3.84167481264697,4.91077251803627,3.25367366490529,2.50778594275484,7.49431733813838,3.74290573512653,1.93383948643468,1.53030665655075,0.882365676478062,0.463735671240843
|short_description=p1@Cntnap4
}}
}}

Latest revision as of 13:22, 1 October 2015

Short description:p1@Cntnap4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cntnap4_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 0bp_to_ENSMUST00000034225, ENSMUST00000079307, ENSMUST00000118171, ENSMUST00000125196, ENSMUST00000125976, NM_130457, uc009nnj.1, uc009nnk.1, uc012glb.1_5end
EntrezGene:Cntnap4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cntnap4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.28
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.76
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B247.72
cerebellum, neonate N30.CNhs11135.1395-42I263.46
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A416.18
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D513.91
cortex, neonate N30.CNhs11107.1392-42F217.90
diencephalon, adult.CNhs10482.20-12F212.26
diencephalon, neonate N30.CNhs11201.1388-42B214.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E811.99
hippocampus, neonate N00.CNhs11228.627-43G113.79
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C215.73
medulla oblongata, neonate N30.CNhs11200.1396-42A319.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I951.41
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F27.56
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.42e-1923
neuroblast (sensu Vertebrata)6.42e-1923
neuron9.10e-1233
neuronal stem cell9.10e-1233
neuroblast9.10e-1233
electrically signaling cell9.10e-1233
electrically responsive cell1.12e-0839
electrically active cell1.12e-0839
neural cell3.79e-0743
ectodermal cell8.13e-0744
neurectodermal cell8.13e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.95e-3254
neural tube2.78e-3052
neural rod2.78e-3052
future spinal cord2.78e-3052
neural keel2.78e-3052
central nervous system2.66e-2773
neurectoderm2.37e-2664
neural plate2.37e-2664
presumptive neural plate2.37e-2664
nervous system4.98e-2675
brain5.19e-2647
future brain5.19e-2647
regional part of brain6.14e-2546
gray matter1.12e-2434
anterior neural tube1.45e-2240
ecto-epithelium4.78e-2273
regional part of forebrain1.41e-2139
forebrain1.41e-2139
future forebrain1.41e-2139
pre-chordal neural plate6.86e-2149
brain grey matter2.70e-2029
regional part of telencephalon2.70e-2029
telencephalon2.70e-2029
ectoderm-derived structure3.42e-2095
ectoderm3.42e-2095
presumptive ectoderm3.42e-2095
structure with developmental contribution from neural crest8.76e-1492
cerebral cortex1.34e-1321
cerebral hemisphere1.34e-1321
pallium1.34e-1321
regional part of cerebral cortex4.04e-1117
occipital lobe6.79e-1010
visual cortex6.79e-1010
neocortex6.79e-1010
posterior neural tube4.65e-0812
chordal neural plate4.65e-0812
basal ganglion5.66e-088
nuclear complex of neuraxis5.66e-088
aggregate regional part of brain5.66e-088
collection of basal ganglia5.66e-088
cerebral subcortex5.66e-088
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