FFCP PHASE1:Mm9::chr8:120807619..120807638,+: Difference between revisions
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{{FFCP|EntrezGene=12554|HGNC=|MCL_coexpression_id=3659|UniProt=Q9WTR5|association_with_transcript=0bp_to_ENSMUST00000117160_5end|description=CAGE_peak_2_at_Cdh13_5end|id=chr8:120807619..120807638,+|ontology_enrichment_celltype=CL:0000117!3.41e-11!23;CL:0000337!3.41e-11!23;CL:0002319!4.67e-07!43;CL:0000540!6.95e-07!33;CL:0000047!6.95e-07!33;CL:0000031!6.95e-07!33;CL:0000404!6.95e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.14e-11,23;CL:0000337,2.14e-11,23;CL:0002319,3.21e-07,43;CL:0000540,5.69e-07,33;CL:0000047,5.69e-07,33;CL:0000031,5.69e-07,33;CL:0000404,5.69e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.04e-13!34;UBERON:0001017!1.11e-13!73;UBERON:0005743!1.11e-13!73;UBERON:0000073!2.42e-13!75;UBERON:0001016!2.42e-13!75;UBERON:0001049!2.62e-13!52;UBERON:0005068!2.62e-13!52;UBERON:0006241!2.62e-13!52;UBERON:0007135!2.62e-13!52;UBERON:0004121!6.10e-13!102;UBERON:0000924!6.10e-13!102;UBERON:0006601!6.10e-13!102;UBERON:0000955!1.20e-11!50;UBERON:0006238!1.20e-11!50;UBERON:0002616!1.80e-11!49;UBERON:0002791!1.47e-10!29;UBERON:0003528!1.47e-10!29;UBERON:0001893!1.47e-10!29;UBERON:0002346!1.71e-10!71;UBERON:0003075!1.71e-10!71;UBERON:0007284!1.71e-10!71;UBERON:0000033!1.95e-10!63;UBERON:0004111!2.67e-10!122;UBERON:0000025!3.31e-10!114;UBERON:0003080!4.81e-10!40;UBERON:0003056!1.30e-09!49;UBERON:0002780!1.63e-09!39;UBERON:0001890!1.63e-09!39;UBERON:0006240!1.63e-09!39;UBERON:0007100!9.12e-08!18;UBERON:0000948!9.12e-08!18;UBERON:0005498!9.12e-08!18;UBERON:0004140!9.12e-08!18;UBERON:0009881!9.12e-08!18;UBERON:0004141!9.12e-08!18;UBERON:0003084!9.12e-08!18;UBERON:0007005!9.12e-08!18;UBERON:0004139!9.12e-08!18;UBERON:0004291!9.12e-08!18;UBERON:0000479!1.39e-07!349;UBERON:0000956!1.48e-07!21;UBERON:0001869!1.48e-07!21;UBERON:0000203!1.48e-07!21;UBERON:0003103!6.21e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.00e-17,92;UBERON:0004121,7.34e-15,95;UBERON:0000924,7.34e-15,95;UBERON:0006601,7.34e-15,95;UBERON:0000073,8.46e-15,54;UBERON:0001017,5.43e-14,73;UBERON:0002020,5.82e-14,34;UBERON:0010371,9.83e-14,73;UBERON:0001049,1.20e-13,52;UBERON:0005068,1.20e-13,52;UBERON:0006241,1.20e-13,52;UBERON:0007135,1.20e-13,52;UBERON:0001016,1.21e-13,75;UBERON:0002346,6.79e-13,64;UBERON:0003075,6.79e-13,64;UBERON:0007284,6.79e-13,64;UBERON:0003528,9.54e-11,29;UBERON:0002791,9.54e-11,29;UBERON:0001893,9.54e-11,29;UBERON:0000955,1.59e-10,47;UBERON:0006238,1.59e-10,47;UBERON:0002616,2.39e-10,46;UBERON:0003080,3.20e-10,40;UBERON:0000025,8.08e-10,114;UBERON:0003056,8.79e-10,49;UBERON:0004111,9.18e-10,122;UBERON:0002780,1.11e-09,39;UBERON:0001890,1.11e-09,39;UBERON:0006240,1.11e-09,39;UBERON:0007100,6.75e-08,18;UBERON:0000948,6.75e-08,18;UBERON:0005498,6.75e-08,18;UBERON:0004140,6.75e-08,18;UBERON:0009881,6.75e-08,18;UBERON:0004141,6.75e-08,18;UBERON:0003084,6.75e-08,18;UBERON:0007005,6.75e-08,18;UBERON:0004139,6.75e-08,18;UBERON:0004291,6.75e-08,18;UBERON:0000956,1.11e-07,21;UBERON:0001869,1.11e-07,21;UBERON:0000203,1.11e-07,21;UBERON:0003103,7.00e-07,43|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56885282344521,13.007114607316,9.92559198727954,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7879370412944,20.6505011770404,18.8597002102055,11.198913730029,18.6878333674463,0,0,0,4.11615097657515,3.15186783932632,11.3447860301037,32.168317276676,39.6743234454025,34.2268957893337,3.72728985276045,0.889294796111139,0.449949858640699,0,0,3.89480143673926,3.84218305321555,17.2124756432073,22.275979824729,17.0363218694619,45.4185065202048,47.4867363045969,13.5964787128599,14.185129710699,16.5459381589804,37.4393995397922,21.3237854602263,25.6522910537927,17.1452174049252,25.4335649214699,17.7110545989298,22.6138229191119,18.0084035210138,19.0997809721013,40.9533733808398,41.430159112539,32.9927019110782,1.51452386666368,4.76100828672749,97.6843326924654,6.88339101585109,0.679971333707751,0.539703191637817,1.29955283489534,0.448026887097336,9.40977614882737,33.2339129027213,21.3024523774352,20.1403557470894,0.281686839553361,0,2.54805239706646,0,9.09262372247099,7.60079596425296,7.07734223020697,2.51204535381932,1.55362730188303,2.82040064223167,0.867426633830679,1.52232739156071,1.38369298353635,1.20578112442098,1.41106448562846,2.01066546127481,3.95511948374998,30.3658649531814,3.5384422077995,27.9856650409018,15.0172232553068,8.24287930329878,1.86391761218122,3.80615036115011,5.23616767033638,1.02182822083437,0,0,0,33.5531032266803,22.4175295381127,23.6230181972185,27.638066910572,20.9686675010871,28.2591740601002,28.2299797737898,2.34230536855727,9.08170885453679,1.51633655060205,3.57751155007006,2.08192708740326,3.21862946206862,3.78130472591233,7.38453607395004,7.00775941258677,8.32739181851524,7.77724313845749,9.31332134660456,1.5089759505299,6.61871280587367,4.22282697993477,4.16471891612392,4.17070873838397,16.0195996600197,16.2567887762275,0.398068533636986,0,0,0.568326998791185,10.9776659443816,14.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12554 | |||
|HGNC= | |||
|MCL_coexpression_id=3659 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WTR5 | |||
|association_with_transcript=0bp_to_ENSMUST00000117160_5end | |||
|cluster_id=chr8:120807619..120807638,+ | |||
|description=CAGE_peak_2_at_Cdh13_5end | |||
|id=chr8:120807619..120807638,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.41e-11!23;CL:0000337!3.41e-11!23;CL:0002319!4.67e-07!43;CL:0000540!6.95e-07!33;CL:0000047!6.95e-07!33;CL:0000031!6.95e-07!33;CL:0000404!6.95e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.14e-11,23;CL:0000337,2.14e-11,23;CL:0002319,3.21e-07,43;CL:0000540,5.69e-07,33;CL:0000047,5.69e-07,33;CL:0000031,5.69e-07,33;CL:0000404,5.69e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.04e-13!34;UBERON:0001017!1.11e-13!73;UBERON:0005743!1.11e-13!73;UBERON:0000073!2.42e-13!75;UBERON:0001016!2.42e-13!75;UBERON:0001049!2.62e-13!52;UBERON:0005068!2.62e-13!52;UBERON:0006241!2.62e-13!52;UBERON:0007135!2.62e-13!52;UBERON:0004121!6.10e-13!102;UBERON:0000924!6.10e-13!102;UBERON:0006601!6.10e-13!102;UBERON:0000955!1.20e-11!50;UBERON:0006238!1.20e-11!50;UBERON:0002616!1.80e-11!49;UBERON:0002791!1.47e-10!29;UBERON:0003528!1.47e-10!29;UBERON:0001893!1.47e-10!29;UBERON:0002346!1.71e-10!71;UBERON:0003075!1.71e-10!71;UBERON:0007284!1.71e-10!71;UBERON:0000033!1.95e-10!63;UBERON:0004111!2.67e-10!122;UBERON:0000025!3.31e-10!114;UBERON:0003080!4.81e-10!40;UBERON:0003056!1.30e-09!49;UBERON:0002780!1.63e-09!39;UBERON:0001890!1.63e-09!39;UBERON:0006240!1.63e-09!39;UBERON:0007100!9.12e-08!18;UBERON:0000948!9.12e-08!18;UBERON:0005498!9.12e-08!18;UBERON:0004140!9.12e-08!18;UBERON:0009881!9.12e-08!18;UBERON:0004141!9.12e-08!18;UBERON:0003084!9.12e-08!18;UBERON:0007005!9.12e-08!18;UBERON:0004139!9.12e-08!18;UBERON:0004291!9.12e-08!18;UBERON:0000479!1.39e-07!349;UBERON:0000956!1.48e-07!21;UBERON:0001869!1.48e-07!21;UBERON:0000203!1.48e-07!21;UBERON:0003103!6.21e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.00e-17,92;UBERON:0004121,7.34e-15,95;UBERON:0000924,7.34e-15,95;UBERON:0006601,7.34e-15,95;UBERON:0000073,8.46e-15,54;UBERON:0001017,5.43e-14,73;UBERON:0002020,5.82e-14,34;UBERON:0010371,9.83e-14,73;UBERON:0001049,1.20e-13,52;UBERON:0005068,1.20e-13,52;UBERON:0006241,1.20e-13,52;UBERON:0007135,1.20e-13,52;UBERON:0001016,1.21e-13,75;UBERON:0002346,6.79e-13,64;UBERON:0003075,6.79e-13,64;UBERON:0007284,6.79e-13,64;UBERON:0003528,9.54e-11,29;UBERON:0002791,9.54e-11,29;UBERON:0001893,9.54e-11,29;UBERON:0000955,1.59e-10,47;UBERON:0006238,1.59e-10,47;UBERON:0002616,2.39e-10,46;UBERON:0003080,3.20e-10,40;UBERON:0000025,8.08e-10,114;UBERON:0003056,8.79e-10,49;UBERON:0004111,9.18e-10,122;UBERON:0002780,1.11e-09,39;UBERON:0001890,1.11e-09,39;UBERON:0006240,1.11e-09,39;UBERON:0007100,6.75e-08,18;UBERON:0000948,6.75e-08,18;UBERON:0005498,6.75e-08,18;UBERON:0004140,6.75e-08,18;UBERON:0009881,6.75e-08,18;UBERON:0004141,6.75e-08,18;UBERON:0003084,6.75e-08,18;UBERON:0007005,6.75e-08,18;UBERON:0004139,6.75e-08,18;UBERON:0004291,6.75e-08,18;UBERON:0000956,1.11e-07,21;UBERON:0001869,1.11e-07,21;UBERON:0000203,1.11e-07,21;UBERON:0003103,7.00e-07,43 | |||
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| |||
|short_description=p2@Cdh13 | |||
}} |
Latest revision as of 14:34, 1 October 2015
Short description: | p2@Cdh13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdh13_5end |
Coexpression cluster: | MCL_coexpression_mm9:3659 |
Association with transcript: | 0bp_to_ENSMUST00000117160_5end |
EntrezGene: | Cdh13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.14e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.14e-11 | 23 |
neural cell | 3.21e-07 | 43 |
neuron | 5.69e-07 | 33 |
neuronal stem cell | 5.69e-07 | 33 |
neuroblast | 5.69e-07 | 33 |
electrically signaling cell | 5.69e-07 | 33 |