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FFCP PHASE1:Mm9::chr5:114541367..114541413,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68666
|EntrezGene=68666
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D3Z379,Q8BFT9
|UniProt=D3Z379,Q8BFT9
|association_with_transcript=0bp_to_ENSMUST00000140151,ENSMUST00000150106,NM_026805,uc008yzb.1,uc012ebs.1_5end
|association_with_transcript=0bp_to_ENSMUST00000140151,ENSMUST00000150106,NM_026805,uc008yzb.1,uc012ebs.1_5end
|cluster_id=chr5:114541367..114541413,-
|description=CAGE_peak_1_at_Svop_5end
|description=CAGE_peak_1_at_Svop_5end
|id=chr5:114541367..114541413,-
|id=chr5:114541367..114541413,-
|ontology_enrichment_celltype=CL:0000540!3.13e-16!33;CL:0000047!3.13e-16!33;CL:0000031!3.13e-16!33;CL:0000404!3.13e-16!33;CL:0000221!3.33e-15!44;CL:0000133!3.33e-15!44;CL:0002319!4.14e-15!43;CL:0000117!2.22e-14!23;CL:0000337!2.22e-14!23;CL:0000393!1.37e-13!39;CL:0000211!1.37e-13!39;CL:0000055!1.69e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.91e-18,33;CL:0000047,2.91e-18,33;CL:0000031,2.91e-18,33;CL:0000404,2.91e-18,33;CL:0000117,5.76e-17,23;CL:0000337,5.76e-17,23;CL:0000393,3.78e-15,39;CL:0000211,3.78e-15,39;CL:0000221,3.49e-14,44;CL:0000133,3.49e-14,44;CL:0002319,4.77e-14,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.08e-35!73;UBERON:0005743!1.08e-35!73;UBERON:0000073!1.12e-35!75;UBERON:0001016!1.12e-35!75;UBERON:0002346!2.14e-34!71;UBERON:0003075!2.14e-34!71;UBERON:0007284!2.14e-34!71;UBERON:0004121!4.97e-33!102;UBERON:0000924!4.97e-33!102;UBERON:0006601!4.97e-33!102;UBERON:0000033!2.29e-29!63;UBERON:0001049!6.12e-29!52;UBERON:0005068!6.12e-29!52;UBERON:0006241!6.12e-29!52;UBERON:0007135!6.12e-29!52;UBERON:0000955!5.94e-28!50;UBERON:0006238!5.94e-28!50;UBERON:0002616!3.59e-27!49;UBERON:0003056!2.11e-25!49;UBERON:0003080!2.73e-22!40;UBERON:0002020!1.21e-21!34;UBERON:0002780!1.49e-21!39;UBERON:0001890!1.49e-21!39;UBERON:0006240!1.49e-21!39;UBERON:0002791!1.36e-18!29;UBERON:0003528!1.36e-18!29;UBERON:0001893!1.36e-18!29;UBERON:0007811!5.43e-15!86;UBERON:0000956!2.89e-13!21;UBERON:0001869!2.89e-13!21;UBERON:0000203!2.89e-13!21;UBERON:0000153!1.74e-11!94;UBERON:0002619!5.02e-11!17;UBERON:0002021!6.62e-09!10;UBERON:0000411!6.62e-09!10;UBERON:0001950!6.62e-09!10;UBERON:0003076!4.41e-07!12;UBERON:0003057!4.41e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.70e-37,73;UBERON:0001016,9.94e-37,75;UBERON:0002346,2.37e-36,64;UBERON:0003075,2.37e-36,64;UBERON:0007284,2.37e-36,64;UBERON:0000073,1.02e-33,54;UBERON:0004121,1.73e-33,95;UBERON:0000924,1.73e-33,95;UBERON:0006601,1.73e-33,95;UBERON:0001049,7.33e-32,52;UBERON:0005068,7.33e-32,52;UBERON:0006241,7.33e-32,52;UBERON:0007135,7.33e-32,52;UBERON:0010371,9.95e-30,73;UBERON:0000955,3.78e-28,47;UBERON:0006238,3.78e-28,47;UBERON:0002616,3.03e-27,46;UBERON:0003056,5.25e-27,49;UBERON:0002020,4.82e-24,34;UBERON:0003080,6.15e-24,40;UBERON:0010314,2.67e-23,92;UBERON:0002780,4.55e-23,39;UBERON:0001890,4.55e-23,39;UBERON:0006240,4.55e-23,39;UBERON:0003528,2.15e-20,29;UBERON:0002791,2.15e-20,29;UBERON:0001893,2.15e-20,29;UBERON:0000956,4.68e-14,21;UBERON:0001869,4.68e-14,21;UBERON:0000203,4.68e-14,21;UBERON:0002619,2.21e-11,17;UBERON:0002021,2.18e-10,10;UBERON:0000411,2.18e-10,10;UBERON:0001950,2.18e-10,10;UBERON:0003076,3.36e-08,12;UBERON:0003057,3.36e-08,12;UBERON:0002420,1.48e-07,8;UBERON:0007245,1.48e-07,8;UBERON:0010009,1.48e-07,8;UBERON:0010011,1.48e-07,8;UBERON:0000454,1.48e-07,8
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8855411393369,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.62203089951223,0.367093504323363,1.56478268869608,1.30815093828268,0.659058548203415,0.194429899074283,0.699932108126813,0,0,0,0,0,0,0,36.0123300330084,34.3844136526821,31.691570175309,6.43804610931351,1.77858959222228,0,0,0.7104801149461,0.599200221036809,1.53687322128622,25.611334240194,26.0561460980163,27.9732198597338,35.9920240348793,36.4433092570162,27.9279022210095,29.7120960156533,26.6573448116906,37.4393995397922,37.7954520732156,40.0913051798795,40.0934314699789,42.9991924931325,30.7338888628488,33.5019598801657,36.0168070420275,41.2555268997387,37.7124589406295,28.3319644790215,31.8743052361264,0.454357159999104,1.058001841495,0,0,0,0,0,0,2.66844398250329,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0,0,1.02765491747154,0,1.63286352971307,2.77576522825817,3.34912026143355,2.53677046981664,3.01445281105245,1.64624189989987,0.879666139307728,0,0.144599356919912,0,0,0,0,0,37.7687228144896,42.9365748967583,0.255457055208591,0,0,0,49.4309110035915,76.8601012735293,59.6858172536106,67.0961875942187,86.4318245776517,42.5965491347098,54.0263406015633,0,0,0,8.83855794723191,0.260240885925407,2.5289231487682,3.78130472591233,6.78171680260718,8.02830689985669,8.71173297936978,11.3379086717272,23.0245999957724,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,72.5500322546239,39.2066573165074,0,0,0,1.16118335930219,0.77320476793256,0.201683524623343,0.667134131534611,0.380451252225118,0,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.456994050438915,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.1238827472532,32.3504254994481,0.327869890753351,0,4.41711507182759,4.29482618726302,3.87762115919038,2.62865677747807,2.89638276307112,3.11384183867716,5.66734982344852,4.9683495844923,4.34816555741176,49.8048040453801,0,0,0,0,1.32745138339963,1.94224508923985,1.209294227859,0.377210159511796,0.590603785761546,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,14.2984634416591,0.900305470156551,2.71653235943784,2.35770738534752,3.3694644392032,4.45922044005176,4.27827453565514,4.87143918583359,0,0,0.661585194164886,0,0,0,0,0,0.582961673259701,29.11177241565,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.756037385752609,0.418176592028937,0,0.404593039154462,0.661227645802687,0,0.518459893167171,0,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.443971906748129,0.179427713218951,1.17519231454855,0.386379188064381,0,0,0,0,80.7595134942405,63.9852078744976,75.6222077740004,65.1323561082576,63.7126743386697,79.3163592259185,66.8272275229488,54.4888655901307,55.283373896073,63.6845183454738,1.03787347584177,7.18244772121856,6.14640980714883,4.37592090722929,2.51535795153579,3.49302666055027,4.88942801163553,6.59312183164461,4.49286893428541,6.06473308233114,7.60437899670719,7.35642731405697,3.7456602987953,5.44213795441389,4.82457939227151,4.76293691283074,5.91010062318763,5.59436739344745,2.88460130562315,3.23837624295674,5.82877729055206,3.90446773550542,5.24559617884106,4.94177816549917,4.23492211868988,5.92302255241735,6.21955107767427,3.94604567156764,5.70377278152619,7.85599180320834,3.6776855618494,4.33419722452479,6.95692773388472,4.80304207676495,4.43685205256625,14.9886346762768,5.14649538579898,4.08255002691767,2.29545998482612,1.54413993383661,0.695603506861264
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8855411393369,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.62203089951223,0.367093504323363,1.56478268869608,1.30815093828268,0.659058548203415,0.194429899074283,0.699932108126813,0,0,0,0,0,0,0,36.0123300330084,34.3844136526821,31.691570175309,6.43804610931351,1.77858959222228,0,0,0.7104801149461,0.599200221036809,1.53687322128622,25.611334240194,26.0561460980163,27.9732198597338,35.9920240348793,36.4433092570162,27.9279022210095,29.7120960156533,26.6573448116906,37.4393995397922,37.7954520732156,40.0913051798795,40.0934314699789,42.9991924931325,30.7338888628488,33.5019598801657,36.0168070420275,41.2555268997387,37.7124589406295,28.3319644790215,31.8743052361264,0.454357159999104,1.058001841495,0,0,0,0,0,0,2.66844398250329,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0,0,1.02765491747154,0,1.63286352971307,2.77576522825817,3.34912026143355,2.53677046981664,3.01445281105245,1.64624189989987,0.879666139307728,0,0.144599356919912,0,0,0,0,0,37.7687228144896,42.9365748967583,0.255457055208591,0,0,0,49.4309110035915,76.8601012735293,59.6858172536106,67.0961875942187,86.4318245776517,42.5965491347098,54.0263406015633,0,0,0,8.83855794723191,0.260240885925407,2.5289231487682,3.78130472591233,6.78171680260718,8.02830689985669,8.71173297936978,11.3379086717272,23.0245999957724,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,72.5500322546239,39.2066573165074,0,0,0,1.16118335930219,0.77320476793256,0.201683524623343,0.667134131534611,0.380451252225118,0,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.456994050438915,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.1238827472532,32.3504254994481,0.327869890753351,0,4.41711507182759,4.29482618726302,3.87762115919038,2.62865677747807,2.89638276307112,3.11384183867716,5.66734982344852,4.9683495844923,4.34816555741176,49.8048040453801,0,0,0,0,1.32745138339963,1.94224508923985,1.209294227859,0.377210159511796,0.590603785761546,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,14.2984634416591,0.900305470156551,2.71653235943784,2.35770738534752,3.3694644392032,4.45922044005176,4.27827453565514,4.87143918583359,0,0,0.661585194164886,0,0,0,0,0,0.582961673259701,29.11177241565,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.756037385752609,0.418176592028937,0,0.404593039154462,0.661227645802687,0,0.518459893167171,0,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.443971906748129,0.179427713218951,1.17519231454855,0.386379188064381,0,0,0,0,80.7595134942405,63.9852078744976,75.6222077740004,65.1323561082576,63.7126743386697,79.3163592259185,66.8272275229488,54.4888655901307,55.283373896073,63.6845183454738,1.03787347584177,7.18244772121856,6.14640980714883,4.37592090722929,2.51535795153579,3.49302666055027,4.88942801163553,6.59312183164461,4.49286893428541,6.06473308233114,7.60437899670719,7.35642731405697,3.7456602987953,5.44213795441389,4.82457939227151,4.76293691283074,5.91010062318763,5.59436739344745,2.88460130562315,3.23837624295674,5.82877729055206,3.90446773550542,5.24559617884106,4.94177816549917,4.23492211868988,5.92302255241735,6.21955107767427,3.94604567156764,5.70377278152619,7.85599180320834,3.6776855618494,4.33419722452479,6.95692773388472,4.80304207676495,4.43685205256625,14.9886346762768,5.14649538579898,4.08255002691767,2.29545998482612,1.54413993383661,0.695603506861264
|short_description=p1@Svop
|short_description=p1@Svop
}}
}}

Latest revision as of 16:25, 1 October 2015

Short description:p1@Svop
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Svop_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000140151, ENSMUST00000150106, NM_026805, uc008yzb.1, uc012ebs.1_5end
EntrezGene:Svop
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Svop

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C336.01
Mouse Granule cells, donor2.CNhs12357.11731-123E334.38
Mouse Granule cells, donor3.CNhs12108.11636-122C731.69
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D525.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F526.06
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.97
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F135.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D536.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D227.93
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.71
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F337.80
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D740.09
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D440.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F443.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E433.50
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I641.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D637.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.33
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.87
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B237.77
cerebellum, neonate N30.CNhs11135.1395-42I242.94
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A449.43
corpus striatum, adult.CNhs10487.19-21D876.86
corpus striatum, neonate N00.CNhs11226.630-43F159.69
cortex, adult.CNhs10473.12-14D567.10
cortex, neonate N30.CNhs11107.1392-42F286.43
diencephalon, adult.CNhs10482.20-12F242.60
diencephalon, neonate N30.CNhs11201.1388-42B254.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G48.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D46.78
eyeball, neonate N00.CNhs11207.633-15C68.03
eyeball, neonate N01.CNhs11140.1532-43E78.71
eyeball, neonate N02.CNhs11205.1551-44G811.34
eyeball, neonate N16.CNhs11188.777-19A223.02
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E872.55
hippocampus, neonate N00.CNhs11228.627-43G139.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C236.12
medulla oblongata, neonate N30.CNhs11200.1396-42A332.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I949.80
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G814.30
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C929.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A180.76
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A263.99
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A375.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D765.13
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A463.71
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A579.32
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A666.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A754.49
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A855.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A963.68
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H26.15
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.44
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I514.99
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.91e-1833
neuronal stem cell2.91e-1833
neuroblast2.91e-1833
electrically signaling cell2.91e-1833
CNS neuron (sensu Vertebrata)5.76e-1723
neuroblast (sensu Vertebrata)5.76e-1723
electrically responsive cell3.78e-1539
electrically active cell3.78e-1539
ectodermal cell3.49e-1444
neurectodermal cell3.49e-1444
neural cell4.77e-1443

Uber anatomy
Ontology termp-valuen
central nervous system1.70e-3773
nervous system9.94e-3775
neurectoderm2.37e-3664
neural plate2.37e-3664
presumptive neural plate2.37e-3664
regional part of nervous system1.02e-3354
ectoderm-derived structure1.73e-3395
ectoderm1.73e-3395
presumptive ectoderm1.73e-3395
neural tube7.33e-3252
neural rod7.33e-3252
future spinal cord7.33e-3252
neural keel7.33e-3252
ecto-epithelium9.95e-3073
brain3.78e-2847
future brain3.78e-2847
regional part of brain3.03e-2746
pre-chordal neural plate5.25e-2749
gray matter4.82e-2434
anterior neural tube6.15e-2440
structure with developmental contribution from neural crest2.67e-2392
regional part of forebrain4.55e-2339
forebrain4.55e-2339
future forebrain4.55e-2339
brain grey matter2.15e-2029
regional part of telencephalon2.15e-2029
telencephalon2.15e-2029
cerebral cortex4.68e-1421
cerebral hemisphere4.68e-1421
pallium4.68e-1421
regional part of cerebral cortex2.21e-1117
occipital lobe2.18e-1010
visual cortex2.18e-1010
neocortex2.18e-1010
posterior neural tube3.36e-0812
chordal neural plate3.36e-0812
basal ganglion1.48e-078
nuclear complex of neuraxis1.48e-078
aggregate regional part of brain1.48e-078
collection of basal ganglia1.48e-078
cerebral subcortex1.48e-078
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