FFCP PHASE1:Mm9::chr5:115879729..115879743,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17690 | |EntrezGene=17690 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENSMUST00000151444_5end | |association_with_transcript=21bp_to_ENSMUST00000151444_5end | ||
|cluster_id=chr5:115879729..115879743,+ | |||
|description=CAGE_peak_5_at_Msi1_5end | |description=CAGE_peak_5_at_Msi1_5end | ||
|id=chr5:115879729..115879743,+ | |id=chr5:115879729..115879743,+ |
Latest revision as of 17:24, 1 October 2015
Short description: | p5@Msi1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Msi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 21bp_to_ENSMUST00000151444_5end |
EntrezGene: | Msi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@Msi1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.34e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.34e-17 | 23 |
neuron | 1.67e-16 | 33 |
neuronal stem cell | 1.67e-16 | 33 |
neuroblast | 1.67e-16 | 33 |
electrically signaling cell | 1.67e-16 | 33 |
neural cell | 4.32e-16 | 43 |
ectodermal cell | 1.56e-15 | 44 |
neurectodermal cell | 1.56e-15 | 44 |
electrically responsive cell | 7.65e-13 | 39 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.46e-40 | 64 |
neural plate | 3.46e-40 | 64 |
presumptive neural plate | 3.46e-40 | 64 |
ectoderm-derived structure | 2.00e-36 | 95 |
ectoderm | 2.00e-36 | 95 |
presumptive ectoderm | 2.00e-36 | 95 |
ecto-epithelium | 7.97e-35 | 73 |
central nervous system | 3.99e-34 | 73 |
pre-chordal neural plate | 5.80e-33 | 49 |
nervous system | 8.29e-33 | 75 |
Showing 1 to 10 of 61 entries