Personal tools

FFCP PHASE1:Mm9::chr6:77929646..77929702,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:77929646..77929702,-
|DHSsupport=NA
|short_description=p2@Ctnna2
|DPIdataset=NA
|description=CAGE_peak_2_at_Ctnna2_5end
|association_with_transcript=0bp_to_ENSMUST00000160894,ENSMUST00000161846,NM_001109764,NM_009819,NM_145732,uc009cjq.2,uc012enl.1,uc012enm.1_5end
|EntrezGene=12386
|EntrezGene=12386
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E0CXB9,Q61301
|UniProt=E0CXB9,Q61301
|association_with_transcript=0bp_to_ENSMUST00000160894,ENSMUST00000161846,NM_001109764,NM_009819,NM_145732,uc009cjq.2,uc012enl.1,uc012enm.1_5end
|cluster_id=chr6:77929646..77929702,-
|description=CAGE_peak_2_at_Ctnna2_5end
|id=chr6:77929646..77929702,-
|ontology_enrichment_celltype=CL:0000117!9.07e-15!23;CL:0000337!9.07e-15!23;CL:0000540!3.83e-14!33;CL:0000047!3.83e-14!33;CL:0000031!3.83e-14!33;CL:0000404!3.83e-14!33;CL:0000221!1.34e-13!44;CL:0000133!1.34e-13!44;CL:0002319!1.76e-13!43;CL:0000393!1.10e-09!39;CL:0000211!1.10e-09!39;CL:0000055!3.02e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,4.77e-18,23;CL:0000337,4.77e-18,23;CL:0000540,4.95e-15,33;CL:0000047,4.95e-15,33;CL:0000031,4.95e-15,33;CL:0000404,4.95e-15,33;CL:0000221,2.40e-11,44;CL:0000133,2.40e-11,44;CL:0002319,3.51e-11,43;CL:0000393,4.48e-11,39;CL:0000211,4.48e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.95e-33!73;UBERON:0005743!5.95e-33!73;UBERON:0000073!1.11e-32!75;UBERON:0001016!1.11e-32!75;UBERON:0002346!1.77e-29!71;UBERON:0003075!1.77e-29!71;UBERON:0007284!1.77e-29!71;UBERON:0001049!6.60e-29!52;UBERON:0005068!6.60e-29!52;UBERON:0006241!6.60e-29!52;UBERON:0007135!6.60e-29!52;UBERON:0000033!7.03e-28!63;UBERON:0000955!8.49e-28!50;UBERON:0006238!8.49e-28!50;UBERON:0004121!2.40e-27!102;UBERON:0000924!2.40e-27!102;UBERON:0006601!2.40e-27!102;UBERON:0002616!4.03e-27!49;UBERON:0003056!1.55e-24!49;UBERON:0003080!8.19e-23!40;UBERON:0002020!1.56e-22!34;UBERON:0002780!4.03e-22!39;UBERON:0001890!4.03e-22!39;UBERON:0006240!4.03e-22!39;UBERON:0002791!1.43e-19!29;UBERON:0003528!1.43e-19!29;UBERON:0001893!1.43e-19!29;UBERON:0000956!1.11e-14!21;UBERON:0001869!1.11e-14!21;UBERON:0000203!1.11e-14!21;UBERON:0007811!1.43e-14!86;UBERON:0000153!3.22e-13!94;UBERON:0002619!6.48e-12!17;UBERON:0002021!5.66e-09!10;UBERON:0000411!5.66e-09!10;UBERON:0001950!5.66e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.44e-36,64;UBERON:0003075,7.44e-36,64;UBERON:0007284,7.44e-36,64;UBERON:0000073,1.12e-35,54;UBERON:0001017,5.92e-35,73;UBERON:0001049,7.17e-34,52;UBERON:0005068,7.17e-34,52;UBERON:0006241,7.17e-34,52;UBERON:0007135,7.17e-34,52;UBERON:0001016,2.40e-33,75;UBERON:0004121,4.74e-30,95;UBERON:0000924,4.74e-30,95;UBERON:0006601,4.74e-30,95;UBERON:0000955,6.49e-30,47;UBERON:0006238,6.49e-30,47;UBERON:0010371,2.01e-29,73;UBERON:0003056,2.10e-29,49;UBERON:0002616,4.30e-29,46;UBERON:0003080,3.30e-27,40;UBERON:0002020,8.46e-27,34;UBERON:0002780,2.39e-26,39;UBERON:0001890,2.39e-26,39;UBERON:0006240,2.39e-26,39;UBERON:0003528,4.24e-23,29;UBERON:0002791,4.24e-23,29;UBERON:0001893,4.24e-23,29;UBERON:0010314,1.26e-18,92;UBERON:0000956,5.39e-17,21;UBERON:0001869,5.39e-17,21;UBERON:0000203,5.39e-17,21;UBERON:0002619,1.47e-13,17;UBERON:0002021,8.17e-11,10;UBERON:0000411,8.17e-11,10;UBERON:0001950,8.17e-11,10;UBERON:0002420,3.20e-07,8;UBERON:0007245,3.20e-07,8;UBERON:0010009,3.20e-07,8;UBERON:0010011,3.20e-07,8;UBERON:0000454,3.20e-07,8;UBERON:0003076,4.86e-07,12;UBERON:0003057,4.86e-07,12
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22867966284093,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.74420125104357,0.659058548203415,2.91644848611425,0.979904951377538,0,0,0,0,0,0,0,23.4687094597133,23.2756030879694,25.3532561402472,0,0,0,0,0,0.898800331555214,2.30530983192933,36.2913643079672,39.1517221161903,34.4932936616267,17.7103610330358,18.3320888989839,34.9098777762619,28.6577958344527,38.6071890376209,25.3266526298594,32.0495218593821,29.3388478519425,22.420668914133,21.4081086029639,27.0874952689515,22.3346399201105,23.6360296213306,27.350886352049,33.8822873294718,27.3353627134278,24.6047268489397,0.37863096666592,0.453429360640713,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,1.54927761754349,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.693941307064543,0,0.922461989024234,0.753613202763113,0.352766121407114,0.502666365318702,0,0,0,0,0,0,0,20.7874365878198,16.546289838263,0.255457055208591,0,0,0,30.407499799179,41.1750542536764,59.9371259578363,45.7157962105687,53.7002460393694,26.3890816590641,32.772735139687,0.305518091550949,0,0,2.10441855886474,1.82168620147785,1.83921683546778,3.24111833649629,4.37043971723574,4.83059143974428,5.12454881139399,3.74806898238915,4.65666067330228,0.215567992932842,0.567318240503458,0.879755620819744,0.219195732427575,0.278047249225598,0,0,0.995171334092466,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0,0.16455984991348,0,0,0,0,0,28.3891430561572,42.3967003002652,0,0,0.853153002140936,0.928946687441754,1.03093969057675,0,0.667134131534611,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.119284958242,24.8488775575471,0,0,1.57754109708128,0.780877488593277,3.01592756825919,0.955875191810208,0,1.13230612315533,3.23848561339915,3.21481443702443,3.95287777946523,26.66966926301,0.425820255624806,0.178065603667255,0.81443479676788,0,0,0.971122544619926,0,0,0,0.307435147943927,0,0,0,0.632073515871632,0,0,8.85142974959849,1.8006109403131,1.94038025674132,2.14337035031592,3.72414490648775,4.28085162244969,5.26556865926787,1.522324745573,0,0,0.441056796109924,0.16488625294148,0,0,0,0,0.291480836629851,25.5886916774503,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.813277868507395,0.972048067396211,0,0.655087691238533,0.539457385539283,0.578574190077352,0,0.129614973291793,0,5.6369293868419,1.64468200648377,2.15096037594227,4.083474955225,3.09983576346555,2.87225413334323,4.5769323071844,3.3853140059427,5.24296722128554,6.52277126230216,5.18454011264158,0,0.810900861160657,0.410843828659309,0.389762468933385,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,77.9357542811552,58.9216302729186,68.7474616127276,58.9456415438848,64.3977568584404,49.8559972277202,51.9767325178491,49.5353323546642,56.1896587140414,50.7405105516784,1.97195960409936,2.79317411380722,5.12200817262403,7.29320151204882,3.5634237646757,7.72142735490059,6.88964856185007,7.41726206060019,8.66481865897901,6.31743029409494,8.11133759648767,5.09291121742406,4.96299989590377,7.04276676453562,6.77738533676237,6.66811167796303,7.53248118641561,8.68091492086673,8.65380391686944,6.32955356577908,6.17164654293748,5.50174999093946,5.48403236878838,5.81385666529314,7.15231291156513,6.59993941555077,5.67076715905595,5.5244639401947,7.60503037536826,6.17256498823512,8.77899134118889,7.68334962529395,7.36615877705441,8.36658942404216,5.98010494041538,9.74261253957989,3.97683734357194,4.08255002691767,1.53030665655075,1.10295709559758,0.695603506861264
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22867966284093,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.74420125104357,0.659058548203415,2.91644848611425,0.979904951377538,0,0,0,0,0,0,0,23.4687094597133,23.2756030879694,25.3532561402472,0,0,0,0,0,0.898800331555214,2.30530983192933,36.2913643079672,39.1517221161903,34.4932936616267,17.7103610330358,18.3320888989839,34.9098777762619,28.6577958344527,38.6071890376209,25.3266526298594,32.0495218593821,29.3388478519425,22.420668914133,21.4081086029639,27.0874952689515,22.3346399201105,23.6360296213306,27.350886352049,33.8822873294718,27.3353627134278,24.6047268489397,0.37863096666592,0.453429360640713,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,1.54927761754349,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.693941307064543,0,0.922461989024234,0.753613202763113,0.352766121407114,0.502666365318702,0,0,0,0,0,0,0,20.7874365878198,16.546289838263,0.255457055208591,0,0,0,30.407499799179,41.1750542536764,59.9371259578363,45.7157962105687,53.7002460393694,26.3890816590641,32.772735139687,0.305518091550949,0,0,2.10441855886474,1.82168620147785,1.83921683546778,3.24111833649629,4.37043971723574,4.83059143974428,5.12454881139399,3.74806898238915,4.65666067330228,0.215567992932842,0.567318240503458,0.879755620819744,0.219195732427575,0.278047249225598,0,0,0.995171334092466,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0,0.16455984991348,0,0,0,0,0,28.3891430561572,42.3967003002652,0,0,0.853153002140936,0.928946687441754,1.03093969057675,0,0.667134131534611,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.119284958242,24.8488775575471,0,0,1.57754109708128,0.780877488593277,3.01592756825919,0.955875191810208,0,1.13230612315533,3.23848561339915,3.21481443702443,3.95287777946523,26.66966926301,0.425820255624806,0.178065603667255,0.81443479676788,0,0,0.971122544619926,0,0,0,0.307435147943927,0,0,0,0.632073515871632,0,0,8.85142974959849,1.8006109403131,1.94038025674132,2.14337035031592,3.72414490648775,4.28085162244969,5.26556865926787,1.522324745573,0,0,0.441056796109924,0.16488625294148,0,0,0,0,0.291480836629851,25.5886916774503,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.813277868507395,0.972048067396211,0,0.655087691238533,0.539457385539283,0.578574190077352,0,0.129614973291793,0,5.6369293868419,1.64468200648377,2.15096037594227,4.083474955225,3.09983576346555,2.87225413334323,4.5769323071844,3.3853140059427,5.24296722128554,6.52277126230216,5.18454011264158,0,0.810900861160657,0.410843828659309,0.389762468933385,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,77.9357542811552,58.9216302729186,68.7474616127276,58.9456415438848,64.3977568584404,49.8559972277202,51.9767325178491,49.5353323546642,56.1896587140414,50.7405105516784,1.97195960409936,2.79317411380722,5.12200817262403,7.29320151204882,3.5634237646757,7.72142735490059,6.88964856185007,7.41726206060019,8.66481865897901,6.31743029409494,8.11133759648767,5.09291121742406,4.96299989590377,7.04276676453562,6.77738533676237,6.66811167796303,7.53248118641561,8.68091492086673,8.65380391686944,6.32955356577908,6.17164654293748,5.50174999093946,5.48403236878838,5.81385666529314,7.15231291156513,6.59993941555077,5.67076715905595,5.5244639401947,7.60503037536826,6.17256498823512,8.77899134118889,7.68334962529395,7.36615877705441,8.36658942404216,5.98010494041538,9.74261253957989,3.97683734357194,4.08255002691767,1.53030665655075,1.10295709559758,0.695603506861264
|short_description=p2@Ctnna2
}}
}}

Latest revision as of 18:04, 1 October 2015

Short description:p2@Ctnna2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ctnna2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000160894, ENSMUST00000161846, NM_001109764, NM_009819, NM_145732, uc009cjq.2, uc012enl.1, uc012enm.1_5end
EntrezGene:Ctnna2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ctnna2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C323.47
Mouse Granule cells, donor2.CNhs12357.11731-123E323.28
Mouse Granule cells, donor3.CNhs12108.11636-122C725.35
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D536.29
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F539.15
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D934.49
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D234.91
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F228.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D638.61
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F332.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.34
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D827.09
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I627.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.34
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.60
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B220.79
cerebellum, neonate N30.CNhs11135.1395-42I216.55
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A430.41
corpus striatum, adult.CNhs10487.19-21D841.18
corpus striatum, neonate N00.CNhs11226.630-43F159.94
cortex, adult.CNhs10473.12-14D545.72
cortex, neonate N30.CNhs11107.1392-42F253.70
diencephalon, adult.CNhs10482.20-12F226.39
diencephalon, neonate N30.CNhs11201.1388-42B232.77
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C64.83
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E828.39
hippocampus, neonate N00.CNhs11228.627-43G142.40
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C223.12
medulla oblongata, neonate N30.CNhs11200.1396-42A324.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I926.67
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C925.59
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G54.08
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B74.58
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H36.52
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A177.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A258.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A368.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D758.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A464.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A549.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A651.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A749.54
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A856.19
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A950.74
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.61
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.37
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.77e-1823
neuroblast (sensu Vertebrata)4.77e-1823
neuron4.95e-1533
neuronal stem cell4.95e-1533
neuroblast4.95e-1533
electrically signaling cell4.95e-1533
ectodermal cell2.40e-1144
neurectodermal cell2.40e-1144
neural cell3.51e-1143
electrically responsive cell4.48e-1139
electrically active cell4.48e-1139

Uber anatomy
Ontology termp-valuen
neurectoderm7.44e-3664
neural plate7.44e-3664
presumptive neural plate7.44e-3664
regional part of nervous system1.12e-3554
central nervous system5.92e-3573
neural tube7.17e-3452
neural rod7.17e-3452
future spinal cord7.17e-3452
neural keel7.17e-3452
nervous system2.40e-3375
ectoderm-derived structure4.74e-3095
ectoderm4.74e-3095
presumptive ectoderm4.74e-3095
brain6.49e-3047
future brain6.49e-3047
ecto-epithelium2.01e-2973
pre-chordal neural plate2.10e-2949
regional part of brain4.30e-2946
anterior neural tube3.30e-2740
gray matter8.46e-2734
regional part of forebrain2.39e-2639
forebrain2.39e-2639
future forebrain2.39e-2639
brain grey matter4.24e-2329
regional part of telencephalon4.24e-2329
telencephalon4.24e-2329
structure with developmental contribution from neural crest1.26e-1892
cerebral cortex5.39e-1721
cerebral hemisphere5.39e-1721
pallium5.39e-1721
regional part of cerebral cortex1.47e-1317
occipital lobe8.17e-1110
visual cortex8.17e-1110
neocortex8.17e-1110
basal ganglion3.20e-078
nuclear complex of neuraxis3.20e-078
aggregate regional part of brain3.20e-078
collection of basal ganglia3.20e-078
cerebral subcortex3.20e-078
posterior neural tube4.86e-0712
chordal neural plate4.86e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:77929646..77929702,-&oldid=4315373"