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FFCP PHASE1:Mm9::chrX:162676855..162676956,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14758
|EntrezGene=14758
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P35803,Q3V0Z9,A2AEG8
|UniProt=P35803,Q3V0Z9,A2AEG8
|association_with_transcript=0bp_to_ENSMUST00000060210,ENSMUST00000112233,NM_001177961,NM_001177962,NM_023122,uc009uwg.2,uc009uwh.2,uc009uwi.2_5end
|association_with_transcript=0bp_to_ENSMUST00000060210,ENSMUST00000112233,NM_001177961,NM_001177962,NM_023122,uc009uwg.2,uc009uwh.2,uc009uwi.2_5end
|cluster_id=chrX:162676855..162676956,+
|description=CAGE_peak_1_at_Gpm6b_5end
|description=CAGE_peak_1_at_Gpm6b_5end
|id=chrX:162676855..162676956,+
|id=chrX:162676855..162676956,+
|ontology_enrichment_celltype=CL:0000221!3.26e-18!44;CL:0000133!3.26e-18!44;CL:0002319!1.01e-17!43;CL:0000055!8.90e-17!50;CL:0000540!3.85e-14!33;CL:0000047!3.85e-14!33;CL:0000031!3.85e-14!33;CL:0000404!3.85e-14!33;CL:0000393!4.88e-14!39;CL:0000211!4.88e-14!39;CL:0000117!6.54e-11!23;CL:0000337!6.54e-11!23;CL:0002321!9.35e-08!70;CL:0000220!9.35e-08!70
|ontology_enrichment_celltype=CL:0000221!3.26e-18!44;CL:0000133!3.26e-18!44;CL:0002319!1.01e-17!43;CL:0000055!8.90e-17!50;CL:0000540!3.85e-14!33;CL:0000047!3.85e-14!33;CL:0000031!3.85e-14!33;CL:0000404!3.85e-14!33;CL:0000393!4.88e-14!39;CL:0000211!4.88e-14!39;CL:0000117!6.54e-11!23;CL:0000337!6.54e-11!23;CL:0002321!9.35e-08!70;CL:0000220!9.35e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000221,2.82e-18,44;CL:0000133,2.82e-18,44;CL:0002319,8.76e-18,43;CL:0000540,3.46e-14,33;CL:0000047,3.46e-14,33;CL:0000031,3.46e-14,33;CL:0000404,3.46e-14,33;CL:0000393,4.38e-14,39;CL:0000211,4.38e-14,39;CL:0000117,6.03e-11,23;CL:0000337,6.03e-11,23;CL:0002321,8.72e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.72e-31!75;UBERON:0001016!1.72e-31!75;UBERON:0001017!1.35e-30!73;UBERON:0005743!1.35e-30!73;UBERON:0004121!1.47e-28!102;UBERON:0000924!1.47e-28!102;UBERON:0006601!1.47e-28!102;UBERON:0000033!9.74e-21!63;UBERON:0001049!1.83e-20!52;UBERON:0005068!1.83e-20!52;UBERON:0006241!1.83e-20!52;UBERON:0007135!1.83e-20!52;UBERON:0002346!2.89e-20!71;UBERON:0003075!2.89e-20!71;UBERON:0007284!2.89e-20!71;UBERON:0000955!1.79e-19!50;UBERON:0006238!1.79e-19!50;UBERON:0002616!6.87e-19!49;UBERON:0002020!2.15e-18!34;UBERON:0002791!7.98e-16!29;UBERON:0003528!7.98e-16!29;UBERON:0001893!7.98e-16!29;UBERON:0003056!9.87e-16!49;UBERON:0003080!1.70e-14!40;UBERON:0002780!6.63e-14!39;UBERON:0001890!6.63e-14!39;UBERON:0006240!6.63e-14!39;UBERON:0000956!5.42e-12!21;UBERON:0001869!5.42e-12!21;UBERON:0000203!5.42e-12!21;UBERON:0002619!2.12e-10!17;UBERON:0007811!1.75e-09!86;UBERON:0000153!2.64e-09!94;UBERON:0000479!1.94e-08!349;UBERON:0000468!2.74e-08!333;UBERON:0000025!6.09e-08!114;UBERON:0004111!8.47e-08!122;UBERON:0002021!1.79e-07!10;UBERON:0000411!1.79e-07!10;UBERON:0001950!1.79e-07!10;UBERON:0003076!8.69e-07!12;UBERON:0003057!8.69e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.32e-31,75;UBERON:0004121,7.39e-31,95;UBERON:0000924,7.39e-31,95;UBERON:0006601,7.39e-31,95;UBERON:0001017,1.05e-30,73;UBERON:0002346,8.21e-23,64;UBERON:0003075,8.21e-23,64;UBERON:0007284,8.21e-23,64;UBERON:0010371,1.78e-22,73;UBERON:0000073,1.14e-21,54;UBERON:0001049,1.55e-20,52;UBERON:0005068,1.55e-20,52;UBERON:0006241,1.55e-20,52;UBERON:0007135,1.55e-20,52;UBERON:0002020,1.86e-18,34;UBERON:0000955,9.72e-18,47;UBERON:0006238,9.72e-18,47;UBERON:0002616,3.63e-17,46;UBERON:0003528,7.06e-16,29;UBERON:0002791,7.06e-16,29;UBERON:0001893,7.06e-16,29;UBERON:0003056,8.74e-16,49;UBERON:0010314,2.19e-15,92;UBERON:0003080,1.52e-14,40;UBERON:0002780,5.96e-14,39;UBERON:0001890,5.96e-14,39;UBERON:0006240,5.96e-14,39;UBERON:0000956,4.95e-12,21;UBERON:0001869,4.95e-12,21;UBERON:0000203,4.95e-12,21;UBERON:0002619,1.97e-10,17;UBERON:0000479,6.49e-08,349;UBERON:0000025,8.15e-08,114;UBERON:0004111,1.12e-07,122;UBERON:0002021,1.70e-07,10;UBERON:0000411,1.70e-07,10;UBERON:0001950,1.70e-07,10;UBERON:0003076,8.31e-07,12;UBERON:0003057,8.31e-07,12
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1033035653,1.53938946624527,0.701261413089414,6.80191150845634,0,0,0,10.8186172658027,13.3254557570339,23.6265595304772,7.93163002592544,10.0314420807073,221.38272230589,179.066517001292,188.482623921561,249.530820763034,162.364557185642,172.229808604852,162.680422555865,141.400857812405,131.864441014404,149.632730096276,3.63255716544618,19.9512436700516,19.8050982674796,17.0174701947806,10.8998844566551,14.8913241844511,19.3354653187405,21.427645952845,30.4873249112224,22.2373546352142,20.7853025909997,24.1441716974178,20.5074901359042,22.0886775796799,21.0788171067101,19.0517476513229,23.292749514916,24.1136525579631,23.0768104449852,18.8414617772029,20.2292858907395,18.6349596467304,17.8827142460491,18.0229556624087,21.2687199738647,19.7998182466523,21.5855007989872,16.5733918205841,19.4199882799582,21.3234063229941,23.133828534214,20.2919233693661,18.415396942636,16.5782420068984,22.9558867067558,31.2263222422432,24.7967504952133,23.2060738372162,17.0246615541271,19.1914534633978,12.7527309591232
|phase1_expression=78.472935081349,0,0,0,0,0,0.700837921786577,3.09895976259783,0,0,0,0,0,0.0874204024189974,0,1.61980213911861,0.699561878128147,1.57731082679119,1.50825876966313,0.84877930359606,49.6652814482247,0.297872853602656,0,1.75991665072747,2.98232065387321,0,0,0.430942465371778,0,0.252030129759931,0.665191531965914,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,23.4168081434574,20.3767631751224,3.12029478674859,5.47673941043627,121.221986947528,116.873049214739,157.682648149244,71.1131021856842,129.377307928474,0.167782606057736,0,0,22.3815709351274,43.2665494307523,24.2365883370398,53.4115456669338,50.7831340101152,62.7493089471117,10.165335962074,11.5608323494448,1.3498495759221,0.988866362566974,0.7104801149461,47.3368174619079,86.0649003920282,48.9414970096015,43.0668943278093,43.7475919610875,72.2696990541623,61.4014543845486,42.3818165283741,32.1082327911092,41.3648453974509,135.442533629248,151.309495630947,143.622108594588,47.6109498706,44.0970442163615,52.6122504262328,110.556467604547,84.414391504752,166.550090076723,147.01966415136,119.307468509648,99.1645051790599,28.1701439199445,95.5224519749769,5.50742528533188,0.860423876981386,0,0.539703191637817,0.649776417447669,0,11.9377757111989,20.4516387093669,17.6654483129951,19.4336765980687,76.0554466794075,56.4636500622998,91.7298862943925,14.2213340630666,9.74209684550464,10.1343946190039,7.07734223020697,8.22123933977232,31.5904218049549,2.07818994690755,25.6758283613881,12.1786191324856,7.61031140944993,11.6056433225519,10.347806227942,3.14166478324189,5.93267922562497,5.63937491987655,6.19227386364912,15.6913844448987,8.17113618303456,7.27312879702833,3.72783522436244,291.316893026489,313.751166806556,2.04365644166873,0.11981512450592,0,0.508280908292259,159.826612244946,189.86275016973,96.5025424226799,202.33150870381,191.019446625757,150.646332305681,187.875382632463,16.09061948835,9.70374370758726,15.1633655060205,24.411255282831,6.8963834770233,14.2539304748753,17.4660265911189,23.0578371288644,47.8296589033835,58.2917427296067,56.0336312867178,77.3523078509657,4.74249584452253,12.8592134514117,10.7330185740009,12.9325482132269,14.4584569597311,13.5818344943645,17.6972637310831,25.4763861527671,0,0.257347907114715,0,3.72826390563903,2.81431271977315,3.78130329068131,5.68187365404505,3.93528463494808,4.16521204795921,3.0229412817553,2.95100741539581,3.97002164048376,6.91151369636618,5.91002870684743,9.80932595504854,11.2573990317506,9.44065495751518,8.99183005694491,248.773009151363,124.411676366555,0,0.264450566663544,15.3567540385368,12.7730169523241,10.6959992897337,11.0925938542838,7.11609740303585,7.22857379227725,3.79623249235609,6.0938613247884,4.02136334080431,7.56034593756373,6.82374304916921,0.898819408654221,2.37751854862164,1.39398891278057,10.6214024533726,14.738058126655,9.01661885384643,11.8117770150282,11.4431967428899,10.3099655238768,11.6987593679876,9.00421902675573,8.00693511991011,8.88459580236964,0.296452627087149,3.17005700860579,4.71741588271687,1.12431056192427,1.62288097110802,2.17059443777175,5.0925170356284,4.89083433666378,2.7562988551756,2.74561413188081,11.5014565221884,3.72140947668503,3.43241440426017,2.02063102357689,2.15276896226295,1.92977408545347,32.3318082791558,14.4013472945568,21.1854469374634,18.6719594352707,22.7649540839847,30.6536451118523,43.3239426412545,32.3921855443946,52.807773275574,51.158343308867,47.3580662912737,38.3440156434827,34.5369963731791,27.4833211304872,0,0,27.538799289066,32.2845993176537,208.234115214166,242.628191245861,0,7.32165688892682,34.7059041357882,25.7689571235781,41.5767157624302,42.5364460355543,59.4872459799992,68.2214439201086,45.3387985875882,39.1622849601158,30.8324466798288,133.027024998628,20.7232524404072,23.6827252877449,26.2248004559257,23.7556977080451,3.98235415019888,17.4802058031587,13.302236506449,15.8428266994954,10.0402643579463,19.0609791725235,11.8877014857382,19.2672876623078,17.8248689192361,10.7452497698177,5.27093042874994,4.12542172992747,7.14923172082955,8.64293251350289,8.14959707831353,12.6458850668639,10.995094485821,13.3776613201553,18.5940393280397,12.4830629136986,2.81606049676452,5.93129798418696,5.29268155331909,5.60613260001032,14.3703339759356,8.7453741145826,8.35606408021955,8.53532678674319,3.78925087618806,247.171927580009,10.9357363710626,8.66824845445534,7.77817014952789,6.2161590811548,7.10809984149331,9.60868327467395,0.169978429993855,0.139951452323658,0,3.81868247206045,15.8167996790568,16.2655573701479,16.848833168201,17.3543285692009,13.538478952263,18.4764154547204,15.9521169549898,8.11443420150492,6.22151871800606,6.83473244395618,5.6369293868419,32.5946070375874,27.6315679063353,40.0569447988738,30.2233986937891,35.9876547295357,35.6766005483092,27.6033295869174,19.1892600299051,30.4395992240768,25.63467055695,2.52808896502543,8.31173382689673,10.8873614594717,3.76770386635606,3.04345382634718,2.98022032171897,2.28371354087941,1.62458479892035,1.71642964911851,1.600342939755,0.907435666231565,1.36441033035653,1.53938946624527,0.701261413089414,6.80191150845634,0,0,0,10.8186172658027,13.3254557570339,23.6265595304772,7.93163002592544,10.0314420807073,221.38272230589,179.066517001292,188.482623921561,249.530820763034,162.364557185642,172.229808604852,162.680422555865,141.400857812405,131.864441014404,149.632730096276,3.63255716544618,19.9512436700516,19.8050982674796,17.0174701947806,10.8998844566551,14.8913241844511,19.3354653187405,21.427645952845,30.4873249112224,22.2373546352142,20.7853025909997,24.1441716974178,20.5074901359042,22.0886775796799,21.0788171067101,19.0517476513229,23.292749514916,24.1136525579631,23.0768104449852,18.8414617772029,20.2292858907395,18.6349596467304,17.8827142460491,18.0229556624087,21.2687199738647,19.7998182466523,21.5855007989872,16.5733918205841,19.4199882799582,21.3234063229941,23.133828534214,20.2919233693661,18.415396942636,16.5782420068984,22.9558867067558,31.2263222422432,24.7967504952133,23.2060738372162,17.0246615541271,19.1914534633978,12.7527309591232
|short_description=p1@Gpm6b
|short_description=p1@Gpm6b
}}
}}

Latest revision as of 18:28, 1 October 2015

Short description:p1@Gpm6b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gpm6b_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000060210, ENSMUST00000112233, NM_001177961, NM_001177962, NM_023122, uc009uwg.2, uc009uwh.2, uc009uwi.2_5end
EntrezGene:Gpm6b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gpm6b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G778.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A349.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.38
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2121.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8116.87
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3157.68
Mouse Astrocytes, donor2.CNhs12078.11552-120C471.11
Mouse Astrocytes, donor3.CNhs12107.11633-122C4129.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C122.38
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E143.27
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C524.24
Mouse Granule cells, donor1.CNhs12131.11713-123C353.41
Mouse Granule cells, donor2.CNhs12357.11731-123E350.78
Mouse Granule cells, donor3.CNhs12108.11636-122C762.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C847.34
Mouse Microglia, donor2.CNhs12634.11736-123E886.06
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D548.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F543.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D943.75
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F172.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D561.40
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D242.38
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F232.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D641.36
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3135.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3151.31
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7143.62
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D447.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F444.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D852.61
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4110.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E584.41
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6166.55
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6147.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6119.31
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E199.16
Mouse Schwann, donor1.CNhs12507.11728-123D928.17
Mouse Schwann, donor2.CNhs12573.11746-123F995.52
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E317.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G676.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H156.46
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I891.73
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.22
accessory axillary lymph node, adult.CNhs10475.1063-29H931.59
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C525.68
adrenal gland, embryo E16.CNhs11004.1254-43D612.18
adrenal gland, embryo E17.CNhs11043.1263-45I17.61
adrenal gland, embryo E18.CNhs11026.1262-18F511.61
adrenal gland, neonate N00.CNhs11191.1311-23C110.35
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H15.64
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F515.69
bone (os femoris), neonate N16.CNhs11225.1525-43A68.17
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B2291.32
cerebellum, neonate N30.CNhs11135.1395-42I2313.75
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A4159.83
corpus striatum, adult.CNhs10487.19-21D8189.86
corpus striatum, neonate N00.CNhs11226.630-43F196.50
cortex, adult.CNhs10473.12-14D5202.33
cortex, neonate N30.CNhs11107.1392-42F2191.02
diencephalon, adult.CNhs10482.20-12F2150.65
diencephalon, neonate N30.CNhs11201.1388-42B2187.88
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.09
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.70
epididymis, adult.CNhs10490.58-23B215.16
eyeball, adult.CNhs10484.31-12G424.41
eyeball, embryo E12.CNhs11016.345-16C66.90
eyeball, embryo E14.CNhs10521.399-16E214.25
eyeball, embryo E15.CNhs10593.426-16C917.47
eyeball, embryo E17.CNhs11023.1261-18D423.06
eyeball, neonate N00.CNhs11207.633-15C647.83
eyeball, neonate N01.CNhs11140.1532-43E758.29
eyeball, neonate N02.CNhs11205.1551-44G856.03
eyeball, neonate N16.CNhs11188.777-19A277.35
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H212.86
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A812.93
forelimb, embryo E15.CNhs11007.437-20E714.46
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B517.70
gonad, embryo E13.CNhs11044.1564-45I625.48
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D45.68
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I26.91
heart, neonate N10.CNhs11118.749-24G15.91
heart, neonate N16.CNhs11209.782-15G19.81
heart, neonate N20.CNhs11127.821-26I611.26
heart, neonate N25.CNhs11196.1351-25D39.44
heart, neonate N30.CNhs11202.1390-42D28.99
hippocampus, adult.CNhs10478.13-16E8248.77
hippocampus, neonate N00.CNhs11228.627-43G1124.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I515.36
intestine, embryo E13.CNhs11010.381-16D512.77
intestine, embryo E15.CNhs10602.976-16D810.70
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F77.23
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E96.09
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I910.62
kidney, embryo E15.CNhs10997.434-16F814.74
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I211.81
kidney, embryo E18.CNhs11001.1288-20C711.44
kidney, neonate N00.CNhs11214.646-21G710.31
kidney, neonate N10.CNhs11206.758-6D511.70
kidney, neonate N20.CNhs11113.832-19I19.00
kidney, neonate N25.CNhs11122.1353-25F38.01
kidney, neonate N30.CNhs11203.1385-42H18.88
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H64.72
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B132.33
lung, embryo E12.CNhs10522.354-16G214.40
lung, embryo E14.CNhs10604.404-26F821.19
lung, embryo E15.CNhs11020.432-17C518.67
lung, embryo E16.CNhs10998.458-17B622.76
lung, embryo E17.CNhs10605.480-44A630.65
lung, embryo E18.CNhs10583.1287-20I643.32
lung, neonate N00.CNhs11224.640-42C632.39
lung, neonate N06.CNhs11212.683-20E552.81
lung, neonate N07.CNhs11111.715-19A351.16
lung, neonate N10.CNhs11219.750-23E647.36
lung, neonate N20.CNhs11109.822-18A438.34
lung, neonate N25.CNhs11119.1359-25C734.54
lung, neonate N30.CNhs11133.1394-42H227.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B627.54
mammary gland, adult pregnant day19.CNhs10476.588-5H232.28
medulla oblongata, adult.CNhs10477.17-12C2208.23
medulla oblongata, neonate N30.CNhs11200.1396-42A3242.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E134.71
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E225.77
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E341.58
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D742.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D859.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D968.22
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D445.34
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D539.16
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D630.83
olfactory brain, adult.CNhs10489.18-22I9133.03
ovary, adult.CNhs10507.91-2I720.72
ovary, embryo E18.CNhs11040.505-44H723.68
ovary, neonate N00.CNhs11217.1299-22I426.22
oviduct, adult pregnant day01.CNhs10500.988-6G623.76
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F417.48
pancreas, embryo E15.CNhs11042.1556-45F213.30
pancreas, embryo E16.CNhs11003.460-26E515.84
pancreas, embryo E17.CNhs10599.1558-45G310.04
pancreas, embryo E18.CNhs10580.1535-43I719.06
pancreas, neonate N00.CNhs11105.645-26G911.89
pancreas, neonate N01.CNhs11138.1531-43D719.27
pancreas, neonate N02.CNhs11139.1539-43D817.82
pancreas, neonate N16.CNhs11136.787-43B610.75
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E68.64
pituitary gland, embryo E13.CNhs11009.370-44C78.15
pituitary gland, embryo E14.CNhs11037.398-44A512.65
pituitary gland, embryo E15.CNhs10592.427-16B911.00
pituitary gland, embryo E16.CNhs11036.449-43F613.38
pituitary gland, embryo E17.CNhs11039.1265-44F518.59
pituitary gland, neonate N00.CNhs11190.1308-22E912.48
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G35.93
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C35.61
skin, neonate N00.CNhs11124.650-25G414.37
skin, neonate N03.CNhs11215.662-22H38.75
skin, neonate N06.CNhs11097.693-20I58.36
skin, neonate N10.CNhs11108.762-6C48.54
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C9247.17
spleen, adult.CNhs10465.25-2G210.94
spleen, embryo E16.CNhs11035.461-43C18.67
spleen, embryo E18.CNhs11011.1271-21F27.78
spleen, neonate N10.CNhs11116.752-24D16.22
spleen, neonate N20.CNhs11112.824-19H17.11
spleen, neonate N25.CNhs11099.1354-25G39.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E315.82
stomach, embryo E15.CNhs10603.1252-16G816.27
stomach, embryo E16.CNhs11022.459-17D416.85
stomach, embryo E17.CNhs11006.1035-18D517.35
stomach, embryo E18.CNhs10999.1286-20C613.54
stomach, neonate N03.CNhs11193.1340-24B818.48
stomach, neonate N07.CNhs11210.718-18A915.95
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I16.22
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F532.59
testis, embryo E15.CNhs11034.443-27C527.63
testis, embryo E16.CNhs11033.470-26G540.06
testis, embryo E17.CNhs11029.486-18I530.22
testis, embryo E18.CNhs11027.503-18G535.99
testis, neonate N00.CNhs11189.1300-22B735.68
testis, neonate N07.CNhs11222.726-26I427.60
testis, neonate N10.CNhs11204.763-44D919.19
testis, neonate N20.CNhs11110.839-18H330.44
testis, neonate N30.CNhs11130.1391-42E225.63
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I48.31
thymus, embryo E15.CNhs11005.430-45I210.89
thymus, embryo E16.CNhs11002.456-26C53.77
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E410.82
uterus, adult pregnant day19.CNhs10497.590-15F513.33
uterus, adult.CNhs10509.92-27E523.63
vagina, adult.CNhs10502.89-27D57.93
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1221.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2179.07
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3188.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7249.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4162.36
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5172.23
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6162.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7141.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8131.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9149.63
whole body, embryo E11.CNhs11014.324-5I83.63
whole body, embryo E12.CNhs10587.857-27C919.95
whole body, embryo E13.CNhs10512.372-23H219.81
whole body, embryo E14.5.CNhs10578.420-27D217.02
whole body, embryo E14.CNhs10519.395-14B110.90
whole body, embryo E16.CNhs10514.453-14F214.89
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G530.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.24
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.51
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G522.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.11
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.80
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.29
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.58
whole body, embryo E17.5.CNhs10513.490-9F922.96
whole body, embryo E17.CNhs10517.475-3I531.23
whole body, embryo E18.CNhs10516.493-3B324.80
whole body, neonate N00.CNhs10525.657-19C223.21
whole body, neonate N01.CNhs10576.659-23C617.02
whole body, neonate N06.CNhs10515.692-21D119.19
whole body, neonate N10.CNhs10518.761-6B412.75





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.82e-1844
neurectodermal cell2.82e-1844
neural cell8.76e-1843
neuron3.46e-1433
neuronal stem cell3.46e-1433
neuroblast3.46e-1433
electrically signaling cell3.46e-1433
electrically responsive cell4.38e-1439
electrically active cell4.38e-1439
CNS neuron (sensu Vertebrata)6.03e-1123
neuroblast (sensu Vertebrata)6.03e-1123
embryonic cell8.72e-0870

Uber anatomy
Ontology termp-valuen
nervous system1.32e-3175
ectoderm-derived structure7.39e-3195
ectoderm7.39e-3195
presumptive ectoderm7.39e-3195
central nervous system1.05e-3073
neurectoderm8.21e-2364
neural plate8.21e-2364
presumptive neural plate8.21e-2364
ecto-epithelium1.78e-2273
regional part of nervous system1.14e-2154
neural tube1.55e-2052
neural rod1.55e-2052
future spinal cord1.55e-2052
neural keel1.55e-2052
gray matter1.86e-1834
brain9.72e-1847
future brain9.72e-1847
regional part of brain3.63e-1746
brain grey matter7.06e-1629
regional part of telencephalon7.06e-1629
telencephalon7.06e-1629
pre-chordal neural plate8.74e-1649
structure with developmental contribution from neural crest2.19e-1592
anterior neural tube1.52e-1440
regional part of forebrain5.96e-1439
forebrain5.96e-1439
future forebrain5.96e-1439
cerebral cortex4.95e-1221
cerebral hemisphere4.95e-1221
pallium4.95e-1221
regional part of cerebral cortex1.97e-1017
tissue6.49e-08349
tube8.15e-08114
anatomical conduit1.12e-07122
occipital lobe1.70e-0710
visual cortex1.70e-0710
neocortex1.70e-0710
posterior neural tube8.31e-0712
chordal neural plate8.31e-0712
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