FFCP PHASE1:Mm9::chr5:121062567..121062607,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100764 | |EntrezGene=100764 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D1H0,D3Z5Q7 | |UniProt=Q9D1H0,D3Z5Q7 | ||
|association_with_transcript=0bp_to_ENSMUST00000031599,ENSMUST00000136070,ENSMUST00000140554,NM_029096,NM_133908,uc008zhp.2,uc012ecr.1_5end | |association_with_transcript=0bp_to_ENSMUST00000031599,ENSMUST00000136070,ENSMUST00000140554,NM_029096,NM_133908,uc008zhp.2,uc012ecr.1_5end | ||
|cluster_id=chr5:121062567..121062607,- | |||
|description=CAGE_peak_1_at_1110008J03Rik_5end | |description=CAGE_peak_1_at_1110008J03Rik_5end | ||
|id=chr5:121062567..121062607,- | |id=chr5:121062567..121062607,- | ||
|ontology_enrichment_celltype=CL:0002319!3.40e-14!43;CL:0000221!4.48e-14!44;CL:0000133!4.48e-14!44;CL:0000117!1.70e-13!23;CL:0000337!1.70e-13!23;CL:0000055!8.37e-12!50;CL:0000540!8.68e-12!33;CL:0000047!8.68e-12!33;CL:0000031!8.68e-12!33;CL:0000404!8.68e-12!33;CL:0000393!7.05e-10!39;CL:0000211!7.05e-10!39 | |ontology_enrichment_celltype=CL:0002319!3.40e-14!43;CL:0000221!4.48e-14!44;CL:0000133!4.48e-14!44;CL:0000117!1.70e-13!23;CL:0000337!1.70e-13!23;CL:0000055!8.37e-12!50;CL:0000540!8.68e-12!33;CL:0000047!8.68e-12!33;CL:0000031!8.68e-12!33;CL:0000404!8.68e-12!33;CL:0000393!7.05e-10!39;CL:0000211!7.05e-10!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.39e-14,43;CL:0000221,4.48e-14,44;CL:0000133,4.48e-14,44;CL:0000117,1.70e-13,23;CL:0000337,1.70e-13,23;CL:0000540,8.66e-12,33;CL:0000047,8.66e-12,33;CL:0000031,8.66e-12,33;CL:0000404,8.66e-12,33;CL:0000393,7.04e-10,39;CL:0000211,7.04e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.20e-30!73;UBERON:0005743!1.20e-30!73;UBERON:0000073!1.63e-29!75;UBERON:0001016!1.63e-29!75;UBERON:0001049!1.37e-25!52;UBERON:0005068!1.37e-25!52;UBERON:0006241!1.37e-25!52;UBERON:0007135!1.37e-25!52;UBERON:0002346!4.01e-24!71;UBERON:0003075!4.01e-24!71;UBERON:0007284!4.01e-24!71;UBERON:0004121!6.56e-24!102;UBERON:0000924!6.56e-24!102;UBERON:0006601!6.56e-24!102;UBERON:0000955!7.68e-24!50;UBERON:0006238!7.68e-24!50;UBERON:0002616!2.20e-23!49;UBERON:0000033!1.28e-21!63;UBERON:0002020!1.05e-19!34;UBERON:0003080!2.44e-18!40;UBERON:0002780!1.02e-17!39;UBERON:0001890!1.02e-17!39;UBERON:0006240!1.02e-17!39;UBERON:0003056!2.58e-17!49;UBERON:0002791!1.22e-16!29;UBERON:0003528!1.22e-16!29;UBERON:0001893!1.22e-16!29;UBERON:0000956!9.50e-12!21;UBERON:0001869!9.50e-12!21;UBERON:0000203!9.50e-12!21;UBERON:0002619!5.60e-10!17;UBERON:0000025!6.18e-10!114;UBERON:0004111!3.15e-09!122;UBERON:0007811!6.14e-09!86;UBERON:0000153!1.25e-08!94;UBERON:0003076!7.89e-08!12;UBERON:0003057!7.89e-08!12;UBERON:0002021!2.56e-07!10;UBERON:0000411!2.56e-07!10;UBERON:0001950!2.56e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!1.20e-30!73;UBERON:0005743!1.20e-30!73;UBERON:0000073!1.63e-29!75;UBERON:0001016!1.63e-29!75;UBERON:0001049!1.37e-25!52;UBERON:0005068!1.37e-25!52;UBERON:0006241!1.37e-25!52;UBERON:0007135!1.37e-25!52;UBERON:0002346!4.01e-24!71;UBERON:0003075!4.01e-24!71;UBERON:0007284!4.01e-24!71;UBERON:0004121!6.56e-24!102;UBERON:0000924!6.56e-24!102;UBERON:0006601!6.56e-24!102;UBERON:0000955!7.68e-24!50;UBERON:0006238!7.68e-24!50;UBERON:0002616!2.20e-23!49;UBERON:0000033!1.28e-21!63;UBERON:0002020!1.05e-19!34;UBERON:0003080!2.44e-18!40;UBERON:0002780!1.02e-17!39;UBERON:0001890!1.02e-17!39;UBERON:0006240!1.02e-17!39;UBERON:0003056!2.58e-17!49;UBERON:0002791!1.22e-16!29;UBERON:0003528!1.22e-16!29;UBERON:0001893!1.22e-16!29;UBERON:0000956!9.50e-12!21;UBERON:0001869!9.50e-12!21;UBERON:0000203!9.50e-12!21;UBERON:0002619!5.60e-10!17;UBERON:0000025!6.18e-10!114;UBERON:0004111!3.15e-09!122;UBERON:0007811!6.14e-09!86;UBERON:0000153!1.25e-08!94;UBERON:0003076!7.89e-08!12;UBERON:0003057!7.89e-08!12;UBERON:0002021!2.56e-07!10;UBERON:0000411!2.56e-07!10;UBERON:0001950!2.56e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.20e-30,73;UBERON:0001016,1.63e-29,75;UBERON:0000073,1.14e-26,54;UBERON:0010314,1.08e-25,92;UBERON:0001049,1.36e-25,52;UBERON:0005068,1.36e-25,52;UBERON:0006241,1.36e-25,52;UBERON:0007135,1.36e-25,52;UBERON:0002346,9.15e-25,64;UBERON:0003075,9.15e-25,64;UBERON:0007284,9.15e-25,64;UBERON:0004121,6.62e-24,95;UBERON:0000924,6.62e-24,95;UBERON:0006601,6.62e-24,95;UBERON:0000955,4.10e-22,47;UBERON:0006238,4.10e-22,47;UBERON:0010371,8.88e-22,73;UBERON:0002616,1.16e-21,46;UBERON:0002020,1.05e-19,34;UBERON:0003080,2.44e-18,40;UBERON:0002780,1.02e-17,39;UBERON:0001890,1.02e-17,39;UBERON:0006240,1.02e-17,39;UBERON:0003056,2.57e-17,49;UBERON:0003528,1.22e-16,29;UBERON:0002791,1.22e-16,29;UBERON:0001893,1.22e-16,29;UBERON:0000956,9.49e-12,21;UBERON:0001869,9.49e-12,21;UBERON:0000203,9.49e-12,21;UBERON:0002619,5.60e-10,17;UBERON:0000025,6.18e-10,114;UBERON:0004111,3.15e-09,122;UBERON:0003076,7.88e-08,12;UBERON:0003057,7.88e-08,12;UBERON:0002021,2.56e-07,10;UBERON:0000411,2.56e-07,10;UBERON:0001950,2.56e-07,10 | |||
|phase1_expression=8.48788889655408,2.09385244583617,3.63999391511629,4.53696316960245,3.00537437967808,2.68606835059024,2.56973904655078,1.16210991097419,0.563154888606667,0.234064526321993,0.856089841127525,2.71225340584144,2.05440875917447,1.74840804837995,2.6648780945253,3.03712901084739,4.89693314689703,1.10411757875383,1.37114433605739,1.69755860719212,9.09963204616447,3.57447424323187,2.87319768052829,3.51983330145495,2.75291137280604,2.29692785646008,1.7230479846363,4.95583835177545,5.51067916423484,2.01624103807945,2.88249663851896,8.25539875497521,11.6862309641068,0,1.44425809875637,4.15586613396231,3.06254034393554,0.837063261473815,0.7813353445238,0,1.17646297606203,0,1.45653105909346,3.27331726736501,3.95370031756107,4.40512205188036,9.38869613217647,12.209408757305,10.9843091367236,8.55491555926847,8.25919887589639,12.9377307928474,0.503347818173209,1.45072428402269,1.00828139742739,4.88792928468299,4.87106847895886,7.73508138416164,15.1737345644698,16.398720357433,15.8457850876545,10.5041804941431,4.4464739805557,8.09909745553259,3.9554654502679,6.3943210345149,8.08920298399693,18.8266969607562,9.22837549545451,12.1505344498522,11.3575479129746,24.2803336743233,20.3199057675484,8.20688354740192,13.3225204715349,10.1114066527102,9.91042928994498,15.1947932321373,17.2039317246993,15.1669230889723,17.8400905024699,15.6274011167028,29.314214895145,19.6966913511088,19.0997809721013,13.258286346315,14.9490264839058,14.3527573285481,3.48340489332647,4.91215140694106,3.76823835312181,3.44169550792555,1.3599426674155,7.55584468292944,3.24888208723835,1.79210754838934,5.75822122540183,4.60161870960756,7.01422212427746,5.65343319216544,5.63373679106722,1.28326477414318,0,0,3.24736561516821,2.53359865475099,3.0331466700887,5.36664234679582,2.07150306917737,8.16431764856536,6.07198643681475,4.56698217468212,4.15107895060905,6.0289056221049,5.76184664964954,5.90632979249475,1.73036477414062,5.06097749219691,2.65383165584962,3.72063754879041,3.3126227769059,3.87900202508178,7.45567044872489,13.1751358655196,17.1746299587033,3.0654846625031,0.599075622529601,2.39961092397363,1.14363204365758,16.6267609739353,16.0125210986519,12.4397808591736,15.2965401769203,17.9000820131231,20.3632283668369,14.4394724130304,3.25885964321012,3.23458123586242,7.83440551144392,5.47148825304832,6.11566081924707,5.74755261083682,5.40186389416048,6.48030716693575,3.94611695077702,7.17436833595159,5.34099829990454,7.50239775143145,6.25147179505242,5.67318240503458,7.03804496655795,6.35667624039967,4.17070873838397,4.87553033131033,5.55611768301447,5.7719937377363,2.1066395619397,2.31613116403244,0.852490498186778,3.10688658803253,4.69052119962192,5.40186184383045,4.97163944728941,5.50939848892731,6.32495162838251,7.90615412151387,9.12129564758705,5.95503246072564,9.70903114489535,7.38753588355929,7.78260571640215,11.1111990443253,7.02560368931362,11.1391327571109,13.24826675954,9.98174740079059,4.62586296177317,2.3800550999719,6.39864751605702,5.10920678092965,4.12375876230699,4.03367049246685,5.11469500843202,5.70676878337677,2.84717436926707,2.79988223030818,4.52403375840485,3.58121649674071,3.31438948102504,8.08937467788799,4.32276099749388,5.77509692437665,4.93136542478012,5.36968009265725,5.63538678365402,5.09128319613286,5.23671715352589,3.85747009396752,5.75452487830741,8.85660887877613,9.57692239832386,12.0929220643365,4.74324203339438,2.00214126859313,4.52085688760367,3.37293168577281,3.24576194221605,3.85883455603867,4.58326533206556,4.02774592431135,1.29708181420028,2.47105271869273,1.43768206527355,3.34926852901653,4.36852742360385,5.30415643688935,4.12614051100398,2.8946611281802,3.51031061316549,5.68474235311454,3.25929952884052,5.43184274480602,5.63256595892405,5.69521275302174,5.2369600994923,2.92700471786698,3.31033802623001,2.21464689648775,4.30527875375215,3.60499292374624,4.66249451037918,4.62876987460837,1.50791283939272,3.26343410291226,6.88469982226651,4.69092468718045,15.412856638828,16.175212749724,4.59017847054691,5.04941854408746,5.67914794949262,7.41833614163613,6.67812532971677,5.25731355495614,3.7875774594007,3.11384183867716,7.2865926301481,5.84511715822624,5.92931666919785,9.96096080907602,4.25820255624806,6.05423052468668,2.28041743095006,4.78413356620353,7.96470830039777,4.37005145078967,6.95344181018927,5.84675747243284,6.496641643377,7.37844355065426,6.20227903603731,2.90826983582004,4.27796854061666,3.47640433729398,2.10837217149998,6.18813259489121,7.83011093233712,6.48219938512717,6.59729287292048,5.78709994585299,5.14286677562593,5.35106452806212,6.91105886528908,8.22055362609418,3.05073220482823,2.75381692122966,5.95426674748397,5.44124634706884,3.22928853391811,3.25689794612042,3.34242563208782,3.44695889464629,4.08073171281791,17.4299783889879,2.39219233116994,4.54051109519089,4.25947412950337,2.0720530270516,1.91371918809435,2.0590035588587,1.01987057996313,0.69975726161829,0.829199842826543,7.63736494412091,6.32671987162271,3.86306987541013,6.80433647177348,6.06356058441959,5.4590640936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|phase1_expression=8.48788889655408,2.09385244583617,3.63999391511629,4.53696316960245,3.00537437967808,2.68606835059024,2.56973904655078,1.16210991097419,0.563154888606667,0.234064526321993,0.856089841127525,2.71225340584144,2.05440875917447,1.74840804837995,2.6648780945253,3.03712901084739,4.89693314689703,1.10411757875383,1.37114433605739,1.69755860719212,9.09963204616447,3.57447424323187,2.87319768052829,3.51983330145495,2.75291137280604,2.29692785646008,1.7230479846363,4.95583835177545,5.51067916423484,2.01624103807945,2.88249663851896,8.25539875497521,11.6862309641068,0,1.44425809875637,4.15586613396231,3.06254034393554,0.837063261473815,0.7813353445238,0,1.17646297606203,0,1.45653105909346,3.27331726736501,3.95370031756107,4.40512205188036,9.38869613217647,12.209408757305,10.9843091367236,8.55491555926847,8.25919887589639,12.9377307928474,0.503347818173209,1.45072428402269,1.00828139742739,4.88792928468299,4.87106847895886,7.73508138416164,15.1737345644698,16.398720357433,15.8457850876545,10.5041804941431,4.4464739805557,8.09909745553259,3.9554654502679,6.3943210345149,8.08920298399693,18.8266969607562,9.22837549545451,12.1505344498522,11.3575479129746,24.2803336743233,20.3199057675484,8.20688354740192,13.3225204715349,10.1114066527102,9.91042928994498,15.1947932321373,17.2039317246993,15.1669230889723,17.8400905024699,15.6274011167028,29.314214895145,19.6966913511088,19.0997809721013,13.258286346315,14.9490264839058,14.3527573285481,3.48340489332647,4.91215140694106,3.76823835312181,3.44169550792555,1.3599426674155,7.55584468292944,3.24888208723835,1.79210754838934,5.75822122540183,4.60161870960756,7.01422212427746,5.65343319216544,5.63373679106722,1.28326477414318,0,0,3.24736561516821,2.53359865475099,3.0331466700887,5.36664234679582,2.07150306917737,8.16431764856536,6.07198643681475,4.56698217468212,4.15107895060905,6.0289056221049,5.76184664964954,5.90632979249475,1.73036477414062,5.06097749219691,2.65383165584962,3.72063754879041,3.3126227769059,3.87900202508178,7.45567044872489,13.1751358655196,17.1746299587033,3.0654846625031,0.599075622529601,2.39961092397363,1.14363204365758,16.6267609739353,16.0125210986519,12.4397808591736,15.2965401769203,17.9000820131231,20.3632283668369,14.4394724130304,3.25885964321012,3.23458123586242,7.83440551144392,5.47148825304832,6.11566081924707,5.74755261083682,5.40186389416048,6.48030716693575,3.94611695077702,7.17436833595159,5.34099829990454,7.50239775143145,6.25147179505242,5.67318240503458,7.03804496655795,6.35667624039967,4.17070873838397,4.87553033131033,5.55611768301447,5.7719937377363,2.1066395619397,2.31613116403244,0.852490498186778,3.10688658803253,4.69052119962192,5.40186184383045,4.97163944728941,5.50939848892731,6.32495162838251,7.90615412151387,9.12129564758705,5.95503246072564,9.70903114489535,7.38753588355929,7.78260571640215,11.1111990443253,7.02560368931362,11.1391327571109,13.24826675954,9.98174740079059,4.62586296177317,2.3800550999719,6.39864751605702,5.10920678092965,4.12375876230699,4.03367049246685,5.11469500843202,5.70676878337677,2.84717436926707,2.79988223030818,4.52403375840485,3.58121649674071,3.31438948102504,8.08937467788799,4.32276099749388,5.77509692437665,4.93136542478012,5.36968009265725,5.63538678365402,5.09128319613286,5.23671715352589,3.85747009396752,5.75452487830741,8.85660887877613,9.57692239832386,12.0929220643365,4.74324203339438,2.00214126859313,4.52085688760367,3.37293168577281,3.24576194221605,3.85883455603867,4.58326533206556,4.02774592431135,1.29708181420028,2.47105271869273,1.43768206527355,3.34926852901653,4.36852742360385,5.30415643688935,4.12614051100398,2.8946611281802,3.51031061316549,5.68474235311454,3.25929952884052,5.43184274480602,5.63256595892405,5.69521275302174,5.2369600994923,2.92700471786698,3.31033802623001,2.21464689648775,4.30527875375215,3.60499292374624,4.66249451037918,4.62876987460837,1.50791283939272,3.26343410291226,6.88469982226651,4.69092468718045,15.412856638828,16.175212749724,4.59017847054691,5.04941854408746,5.67914794949262,7.41833614163613,6.67812532971677,5.25731355495614,3.7875774594007,3.11384183867716,7.2865926301481,5.84511715822624,5.92931666919785,9.96096080907602,4.25820255624806,6.05423052468668,2.28041743095006,4.78413356620353,7.96470830039777,4.37005145078967,6.95344181018927,5.84675747243284,6.496641643377,7.37844355065426,6.20227903603731,2.90826983582004,4.27796854061666,3.47640433729398,2.10837217149998,6.18813259489121,7.83011093233712,6.48219938512717,6.59729287292048,5.78709994585299,5.14286677562593,5.35106452806212,6.91105886528908,8.22055362609418,3.05073220482823,2.75381692122966,5.95426674748397,5.44124634706884,3.22928853391811,3.25689794612042,3.34242563208782,3.44695889464629,4.08073171281791,17.4299783889879,2.39219233116994,4.54051109519089,4.25947412950337,2.0720530270516,1.91371918809435,2.0590035588587,1.01987057996313,0.69975726161829,0.829199842826543,7.63736494412091,6.32671987162271,3.86306987541013,6.80433647177348,6.06356058441959,5.4590640936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| ||
|short_description=p1@1110008J03Rik | |short_description=p1@1110008J03Rik | ||
}} | }} |
Latest revision as of 18:58, 1 October 2015
Short description: | p1@1110008J03Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1110008J03Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000031599, ENSMUST00000136070, ENSMUST00000140554, NM_029096, NM_133908, uc008zhp.2, uc012ecr.1_5end |
EntrezGene: | 1110008J03Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.39e-14 | 43 |
ectodermal cell | 4.48e-14 | 44 |
neurectodermal cell | 4.48e-14 | 44 |
CNS neuron (sensu Vertebrata) | 1.70e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.70e-13 | 23 |
neuron | 8.66e-12 | 33 |
neuronal stem cell | 8.66e-12 | 33 |
neuroblast | 8.66e-12 | 33 |
electrically signaling cell | 8.66e-12 | 33 |
electrically responsive cell | 7.04e-10 | 39 |
electrically active cell | 7.04e-10 | 39 |