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FFCP PHASE1:Mm9::chr13:58909222..58909244,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18212
|EntrezGene=18212
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P15209
|UniProt=P15209
|association_with_transcript=-16bp_to_ENSMUST00000079828,ENSMUST00000109839,ENSMUST00000109840_5end
|association_with_transcript=-16bp_to_ENSMUST00000079828,ENSMUST00000109839,ENSMUST00000109840_5end
|cluster_id=chr13:58909222..58909244,+
|description=CAGE_peak_1_at_Ntrk2_5end
|description=CAGE_peak_1_at_Ntrk2_5end
|id=chr13:58909222..58909244,+
|id=chr13:58909222..58909244,+
|ontology_enrichment_celltype=CL:0000117!1.38e-11!23;CL:0000337!1.38e-11!23;CL:0000221!1.30e-08!44;CL:0000133!1.30e-08!44;CL:0002319!2.37e-08!43
|ontology_enrichment_celltype=CL:0000117!1.38e-11!23;CL:0000337!1.38e-11!23;CL:0000221!1.30e-08!44;CL:0000133!1.30e-08!44;CL:0002319!2.37e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,5.82e-12,23;CL:0000337,5.82e-12,23;CL:0000221,7.86e-09,44;CL:0000133,7.86e-09,44;CL:0002319,1.47e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0000033!5.69e-29!63;UBERON:0004121!7.71e-28!102;UBERON:0000924!7.71e-28!102;UBERON:0006601!7.71e-28!102;UBERON:0001049!1.15e-27!52;UBERON:0005068!1.15e-27!52;UBERON:0006241!1.15e-27!52;UBERON:0007135!1.15e-27!52;UBERON:0000955!6.93e-27!50;UBERON:0006238!6.93e-27!50;UBERON:0002616!3.54e-26!49;UBERON:0001017!1.54e-25!73;UBERON:0005743!1.54e-25!73;UBERON:0000073!1.93e-25!75;UBERON:0001016!1.93e-25!75;UBERON:0002346!8.38e-25!71;UBERON:0003075!8.38e-25!71;UBERON:0007284!8.38e-25!71;UBERON:0003056!1.33e-22!49;UBERON:0003080!2.96e-21!40;UBERON:0002780!1.32e-20!39;UBERON:0001890!1.32e-20!39;UBERON:0006240!1.32e-20!39;UBERON:0002020!1.70e-19!34;UBERON:0002791!7.36e-17!29;UBERON:0003528!7.36e-17!29;UBERON:0001893!7.36e-17!29;UBERON:0007811!4.23e-15!86;UBERON:0000153!7.64e-15!94;UBERON:0000956!8.80e-13!21;UBERON:0001869!8.80e-13!21;UBERON:0000203!8.80e-13!21;UBERON:0002619!2.64e-11!17;UBERON:0000468!4.04e-09!333;UBERON:0002021!3.17e-08!10;UBERON:0000411!3.17e-08!10;UBERON:0001950!3.17e-08!10;UBERON:0004111!4.37e-08!122;UBERON:0000025!1.49e-07!114;UBERON:0000475!2.63e-07!200;UBERON:0003076!6.83e-07!12;UBERON:0003057!6.83e-07!12;UBERON:0000479!6.87e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.92e-30,54;UBERON:0004121,4.60e-29,95;UBERON:0000924,4.60e-29,95;UBERON:0006601,4.60e-29,95;UBERON:0001049,1.21e-28,52;UBERON:0005068,1.21e-28,52;UBERON:0006241,1.21e-28,52;UBERON:0007135,1.21e-28,52;UBERON:0010371,1.25e-27,73;UBERON:0002346,5.47e-27,64;UBERON:0003075,5.47e-27,64;UBERON:0007284,5.47e-27,64;UBERON:0001017,2.27e-26,73;UBERON:0001016,2.86e-26,75;UBERON:0000955,9.23e-26,47;UBERON:0006238,9.23e-26,47;UBERON:0002616,4.87e-25,46;UBERON:0003056,2.17e-23,49;UBERON:0003080,5.42e-22,40;UBERON:0002780,2.56e-21,39;UBERON:0001890,2.56e-21,39;UBERON:0006240,2.56e-21,39;UBERON:0002020,3.63e-20,34;UBERON:0003528,1.97e-17,29;UBERON:0002791,1.97e-17,29;UBERON:0001893,1.97e-17,29;UBERON:0010314,2.35e-17,92;UBERON:0000956,3.35e-13,21;UBERON:0001869,3.35e-13,21;UBERON:0000203,3.35e-13,21;UBERON:0002619,1.14e-11,17;UBERON:0002021,1.78e-08,10;UBERON:0000411,1.78e-08,10;UBERON:0001950,1.78e-08,10;UBERON:0003076,4.30e-07,12;UBERON:0003057,4.30e-07,12;UBERON:0004111,4.43e-07,122
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961176234,11.81495790459,10.1005608898393,10.4398815949273,10.835493061312,9.82154503607254,9.76102099471586,13.3105561576988,28.7282164628638,18.0127338502964,14.6112316752843,15.1117782334386,17.2061306913222,12.7527309591232
|phase1_expression=8.80818659076367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.721147226349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.38869613217647,68.0238487906993,112.039953194581,131.434611774216,39.0562116334761,51.7509231713898,0,0,0,0,0,1.54701627683233,33.5845325026932,39.1453324661304,34.2268957893337,1.35537812827653,3.55717918444456,0,0.988866362566974,0,135.419249954319,256.273609649477,17.6272340924412,19.4408551197635,15.5640471400023,48.5606673486466,57.6466891883711,28.7853378155142,21.3735400370667,18.3843757322004,136.543692439242,96.0208782400612,128.722274868732,30.4657324656748,24.2442255546386,27.6084086395083,94.3638536624668,114.240809836431,109.403545408196,72.7732606119959,63.0706545940026,41.0078780815661,3.63485727999283,8.08615693142605,1.73918693221007,0.860423876981386,0,0,0,0,7.3031098468511,0,0,0,14.2251853974447,0,0,0,0,0,0,5.36664234679582,3.10725460376606,3.26572705942614,2.25530924795977,5.78484408793068,4.15107895060905,2.86373017049983,5.87943535678524,6.91166252313215,0.741584903203122,33.5470508054195,0.884610551949874,6.30890714794896,3.75430581382669,1.93950101254089,0,52.4077626650669,56.131717426006,0.510914110417183,0,0,0,131.36639075803,172.477727262622,64.9633000423509,205.460346467271,202.015211290961,124.049462602057,158.185231491064,22.0991419555186,5.10068579501381,2.77995034277042,21.2546274445339,6.8963834770233,12.1848115349741,12.7844112161798,12.6592046982001,8.300452896462,9.35230158079403,7.68354141389776,22.7658966250334,1.5089759505299,3.40390944302075,4.04687585577082,3.94552318369635,5.56094498451196,9.75106066262066,6.37924622864625,6.96619933864726,0,0,0,0.828503090142008,2.34526059981096,1.08037236876609,2.60419209143731,0.393528463494808,1.23413690309903,0.930135779001631,2.14618721119695,0.583826711835847,1.48103864922132,1.64167464079095,1.78351381000883,0.730999937126662,1.75640092232841,0.939444931322602,123.650489755707,36.531137394646,0,0.528901133327089,1.49301775374664,1.85789337488351,0.38660238396628,0.403367049246685,0.22237804384487,0.570676878337677,0.949058123089023,0.164698954724011,2.76468729680296,2.78539060857611,3.70431765526328,0,0.648414149624083,0.597423819763102,2.84501851429623,2.51346727741403,2.25415471346161,1.62921062276251,2.52138233317913,2.17421041659988,2.21327879934901,1.03327103585722,1.8839847340965,1.85095745882701,1.48226313543574,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0,0,0.324270453550071,0.274561413188081,2.87536413054709,0.372140947668503,2.80833905803104,1.76805214562978,0.717589654087649,0.482443521363367,0.923765950833023,6.44270800019648,0.325929952884052,1.52770577197669,0.469380496577004,1.67506257441816,2.85652369063216,3.70753930929818,4.09851374676097,5.53661724121937,5.26200736569707,7.86543910635542,4.48980952851328,9.69148692496127,0,0,3.44234991113325,7.45029215022778,77.8670361440791,99.0438751704117,0,6.81671503451807,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,142.666664491282,12.0649072427028,26.531774946421,28.830991805583,17.9817434040064,6.63725691699814,8.25454162926937,6.65111825322452,7.73280826999182,7.67784921490009,5.22639751504677,6.71913562237375,6.90714086007261,7.48644494607915,7.58488219045958,6.32511651449993,7.21948802737308,23.4903327970114,9.18311579559682,14.746889951234,13.9319072770535,16.4926417287314,31.2145430803623,27.4796864405542,30.1420299623453,5.39744928546534,2.54198485036584,5.51320995137405,9.56340267060584,9.20347232166662,6.1519183426719,8.59480876822583,9.68431308495861,0,66.567683421773,0.512612642393558,36.9432493654168,17.2230910453832,0.753473828018764,0.27338845544205,0.457556346413045,0,0,0,1.90934123603023,0.158167996790568,3.25311147402958,1.08005340821801,1.04544148007234,1.09181281873089,1.48350781023303,1.98368293740806,1.30877970992015,0.388844919875379,6.83473244395618,0,0,0.66183396182839,2.91676782516071,6.84547064431975,10.644235905919,13.848154160199,5.208175393758,4.50895181030557,2.41584120826006,4.32045009386798,2.52808896502543,6.48720688928525,5.75181360123033,1.81889152168913,1.79026695667481,0.596044064343795,1.08175904567972,1.47689527174577,0.807731599585181,0.533447646584999,0.302478555410522,0.292373642219257,0.288635524920988,0.818138315270983,13.1503622496823,0,0,0,3.47741269257943,17.8298351678623,17.2162526811229,13.5052078819811,0,233.807262843466,220.956113523445,214.835817539774,242.141133922256,228.132479083624,193.380837731763,240.308010082523,253.080516212012,302.245986792464,272.859684293209,3.84013186061454,7.98049746802062,9.21961471072325,11.9122291363464,4.82110274044359,7.35374033800057,12.4458167568905,9.06554251851134,16.0459604795908,18.699593670521,16.2226751929753,10.7517014590063,11.2369808963859,10.8202507564229,9.99377159827671,6.66811167796303,13.0949288317687,9.45255180272155,7.82963211526283,10.4511233295422,12.343293085875,11.3584515941976,12.3986818772607,15.4067201630268,10.1638130848557,12.0998889285097,13.9025259383307,9.47050961176234,11.81495790459,10.1005608898393,10.4398815949273,10.835493061312,9.82154503607254,9.76102099471586,13.3105561576988,28.7282164628638,18.0127338502964,14.6112316752843,15.1117782334386,17.2061306913222,12.7527309591232
|short_description=p1@Ntrk2
|short_description=p1@Ntrk2
}}
}}

Latest revision as of 20:02, 1 October 2015

Short description:p1@Ntrk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ntrk2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -16bp_to_ENSMUST00000079828, ENSMUST00000109839, ENSMUST00000109840_5end
EntrezGene:Ntrk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ntrk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A331.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C268.02
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8112.04
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3131.43
Mouse Astrocytes, donor2.CNhs12078.11552-120C439.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C451.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C333.58
Mouse Granule cells, donor2.CNhs12357.11731-123E339.15
Mouse Granule cells, donor3.CNhs12108.11636-122C734.23
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C8135.42
Mouse Microglia, donor2.CNhs12634.11736-123E8256.27
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.44
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.56
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F148.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D557.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D228.79
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.37
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3136.54
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F396.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7128.72
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D430.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F424.24
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D827.61
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E494.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5114.24
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6109.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D672.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F663.07
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E141.01
Mouse Schwann, donor1.CNhs12507.11728-123D93.63
Mouse Schwann, donor2.CNhs12573.11746-123F98.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C15.88
adrenal gland, neonate N25.CNhs11223.1377-27I36.91
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H133.55
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F56.31
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B252.41
cerebellum, neonate N30.CNhs11135.1395-42I256.13
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4131.37
corpus striatum, adult.CNhs10487.19-21D8172.48
corpus striatum, neonate N00.CNhs11226.630-43F164.96
cortex, adult.CNhs10473.12-14D5205.46
cortex, neonate N30.CNhs11107.1392-42F2202.02
diencephalon, adult.CNhs10482.20-12F2124.05
diencephalon, neonate N30.CNhs11201.1388-42B2158.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G421.25
eyeball, embryo E12.CNhs11016.345-16C66.90
eyeball, embryo E14.CNhs10521.399-16E212.18
eyeball, embryo E15.CNhs10593.426-16C912.78
eyeball, embryo E17.CNhs11023.1261-18D412.66
eyeball, neonate N00.CNhs11207.633-15C68.30
eyeball, neonate N01.CNhs11140.1532-43E79.35
eyeball, neonate N02.CNhs11205.1551-44G87.68
eyeball, neonate N16.CNhs11188.777-19A222.77
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C49.75
forelimb, embryo E18.CNhs11008.1520-43B56.38
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E8123.65
hippocampus, neonate N00.CNhs11228.627-43G136.53
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G26.44
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E54.10
lung, neonate N07.CNhs11111.715-19A35.54
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A47.87
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H29.69
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C277.87
medulla oblongata, neonate N30.CNhs11200.1396-42A399.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9142.67
ovary, adult.CNhs10507.91-2I712.06
ovary, embryo E18.CNhs11040.505-44H726.53
ovary, neonate N00.CNhs11217.1299-22I428.83
oviduct, adult pregnant day01.CNhs10500.988-6G617.98
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E57.73
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G96.72
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G823.49
pituitary gland, embryo E12.CNhs11018.346-16E69.18
pituitary gland, embryo E13.CNhs11009.370-44C714.75
pituitary gland, embryo E14.CNhs11037.398-44A513.93
pituitary gland, embryo E15.CNhs10592.427-16B916.49
pituitary gland, embryo E16.CNhs11036.449-43F631.21
pituitary gland, embryo E17.CNhs11039.1265-44F527.48
pituitary gland, neonate N00.CNhs11190.1308-22E930.14
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C39.56
skin, neonate N00.CNhs11124.650-25G49.20
skin, neonate N03.CNhs11215.662-22H36.15
skin, neonate N06.CNhs11097.693-20I58.59
skin, neonate N10.CNhs11108.762-6C49.68
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C966.57
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C136.94
spleen, embryo E18.CNhs11011.1271-21F217.22
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I56.85
testis, embryo E18.CNhs11027.503-18G510.64
testis, neonate N00.CNhs11189.1300-22B713.85
testis, neonate N07.CNhs11222.726-26I45.21
testis, neonate N10.CNhs11204.763-44D94.51
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I25.75
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B413.15
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.48
uterus, adult pregnant day19.CNhs10497.590-15F517.83
uterus, adult.CNhs10509.92-27E517.22
vagina, adult.CNhs10502.89-27D513.51
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1233.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2220.96
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3214.84
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7242.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4228.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5193.38
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6240.31
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7253.08
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8302.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9272.86
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H29.22
whole body, embryo E14.5.CNhs10578.420-27D211.91
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F27.35
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.70
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.45
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.76
whole body, embryo E17.5.CNhs10513.490-9F913.31
whole body, embryo E17.CNhs10517.475-3I528.73
whole body, embryo E18.CNhs10516.493-3B318.01
whole body, neonate N00.CNhs10525.657-19C214.61
whole body, neonate N01.CNhs10576.659-23C615.11
whole body, neonate N06.CNhs10515.692-21D117.21
whole body, neonate N10.CNhs10518.761-6B412.75





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.82e-1223
neuroblast (sensu Vertebrata)5.82e-1223
ectodermal cell7.86e-0944
neurectodermal cell7.86e-0944
neural cell1.47e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.92e-3054
ectoderm-derived structure4.60e-2995
ectoderm4.60e-2995
presumptive ectoderm4.60e-2995
neural tube1.21e-2852
neural rod1.21e-2852
future spinal cord1.21e-2852
neural keel1.21e-2852
ecto-epithelium1.25e-2773
neurectoderm5.47e-2764
neural plate5.47e-2764
presumptive neural plate5.47e-2764
central nervous system2.27e-2673
nervous system2.86e-2675
brain9.23e-2647
future brain9.23e-2647
regional part of brain4.87e-2546
pre-chordal neural plate2.17e-2349
anterior neural tube5.42e-2240
regional part of forebrain2.56e-2139
forebrain2.56e-2139
future forebrain2.56e-2139
gray matter3.63e-2034
brain grey matter1.97e-1729
regional part of telencephalon1.97e-1729
telencephalon1.97e-1729
structure with developmental contribution from neural crest2.35e-1792
cerebral cortex3.35e-1321
cerebral hemisphere3.35e-1321
pallium3.35e-1321
regional part of cerebral cortex1.14e-1117
occipital lobe1.78e-0810
visual cortex1.78e-0810
neocortex1.78e-0810
posterior neural tube4.30e-0712
chordal neural plate4.30e-0712
anatomical conduit4.43e-07122
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