FFCP PHASE1:Mm9::chr3:17954496..17954515,+: Difference between revisions
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{{FFCP|EntrezGene=59058|HGNC=|MCL_coexpression_id=609|UniProt=Q8C6A8|association_with_transcript=171bp_to_ENSMUST00000026120,NM_021560,uc008orl.2_5end|description=CAGE_peak_3_at_Bhlhe22_5end|id=chr3:17954496..17954515,+|ontology_enrichment_celltype=CL:0000540!1.04e-18!33;CL:0000047!1.04e-18!33;CL:0000031!1.04e-18!33;CL:0000404!1.04e-18!33;CL:0000393!8.99e-18!39;CL:0000211!8.99e-18!39;CL:0000117!5.34e-17!23;CL:0000337!5.34e-17!23;CL:0000221!5.22e-15!44;CL:0000133!5.22e-15!44;CL:0002319!7.65e-15!43;CL:0000055!4.95e-14!50;CL:0002321!5.85e-07!70;CL:0000220!5.85e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,2.45e-18,23;CL:0000337,2.45e-18,23;CL:0000540,1.69e-13,33;CL:0000047,1.69e-13,33;CL:0000031,1.69e-13,33;CL:0000404,1.69e-13,33;CL:0000393,7.27e-11,39;CL:0000211,7.27e-11,39;CL:0002609,1.21e-09,6;CL:0002319,1.59e-09,43;CL:0000221,3.15e-09,44;CL:0000133,3.15e-09,44;CL:0002612,6.01e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.21e-30!71;UBERON:0003075!1.21e-30!71;UBERON:0007284!1.21e-30!71;UBERON:0004121!1.11e-29!102;UBERON:0000924!1.11e-29!102;UBERON:0006601!1.11e-29!102;UBERON:0000073!4.37e-29!75;UBERON:0001016!4.37e-29!75;UBERON:0001017!1.61e-28!73;UBERON:0005743!1.61e-28!73;UBERON:0002020!8.46e-25!34;UBERON:0000033!2.98e-24!63;UBERON:0001049!4.60e-24!52;UBERON:0005068!4.60e-24!52;UBERON:0006241!4.60e-24!52;UBERON:0007135!4.60e-24!52;UBERON:0003056!9.77e-24!49;UBERON:0002616!1.02e-21!49;UBERON:0002791!5.74e-21!29;UBERON:0003528!5.74e-21!29;UBERON:0001893!5.74e-21!29;UBERON:0000955!6.00e-21!50;UBERON:0006238!6.00e-21!50;UBERON:0002780!2.27e-19!39;UBERON:0001890!2.27e-19!39;UBERON:0006240!2.27e-19!39;UBERON:0003080!1.54e-18!40;UBERON:0000956!1.67e-16!21;UBERON:0001869!1.67e-16!21;UBERON:0000203!1.67e-16!21;UBERON:0002619!6.84e-13!17;UBERON:0007811!1.07e-12!86;UBERON:0000153!3.70e-10!94;UBERON:0002021!3.92e-10!10;UBERON:0000411!3.92e-10!10;UBERON:0001950!3.92e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.24e-35,34;UBERON:0000956,6.33e-34,21;UBERON:0001869,6.33e-34,21;UBERON:0000203,6.33e-34,21;UBERON:0002346,3.71e-31,64;UBERON:0003075,3.71e-31,64;UBERON:0007284,3.71e-31,64;UBERON:0003528,5.16e-29,29;UBERON:0002791,5.16e-29,29;UBERON:0001893,5.16e-29,29;UBERON:0000073,2.83e-28,54;UBERON:0003056,3.93e-27,49;UBERON:0010371,1.99e-26,73;UBERON:0004121,2.13e-26,95;UBERON:0000924,2.13e-26,95;UBERON:0006601,2.13e-26,95;UBERON:0001049,3.33e-25,52;UBERON:0005068,3.33e-25,52;UBERON:0006241,3.33e-25,52;UBERON:0007135,3.33e-25,52;UBERON:0002619,4.36e-25,17;UBERON:0001017,3.39e-24,73;UBERON:0001016,2.31e-23,75;UBERON:0002021,6.09e-23,10;UBERON:0000411,6.09e-23,10;UBERON:0001950,6.09e-23,10;UBERON:0002616,1.89e-20,46;UBERON:0002780,2.77e-20,39;UBERON:0001890,2.77e-20,39;UBERON:0006240,2.77e-20,39;UBERON:0000955,6.72e-20,47;UBERON:0006238,6.72e-20,47;UBERON:0003080,1.19e-19,40;UBERON:0010314,1.78e-19,92;UBERON:0000970,1.96e-08,9;UBERON:0000019,1.96e-08,9;UBERON:0000047,1.96e-08,9;UBERON:0010312,1.96e-08,9;UBERON:0004088,1.96e-08,9;UBERON:0002104,1.96e-08,9;UBERON:0001456,1.96e-08,9;UBERON:0003072,1.96e-08,9;UBERON:0004128,1.96e-08,9;UBERON:0003071,1.96e-08,9;UBERON:0000025,3.84e-08,114;UBERON:0004111,3.22e-07,122;UBERON:0001948,4.22e-07,5;UBERON:0002315,4.22e-07,5;UBERON:0002257,6.01e-07,3;UBERON:0000483,6.93e-07,174;UBERON:0001444,8.93e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.917733760808408,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,2.69592992002042,4.72520784160917,2.94454945891935,1.99955689082663,0.662605622854841,1.10241719293459,1.15014565221884,0.919218786610021,2.20231761998777,0.510749352340751,1.0752457327937,0.395658863190582,0.457438218012048,2.6045668527838,0.558365998002762,1.12552522006336,0.61119299110724,1.17851434189467,1.13897344639282,2.05039390407831,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0,0.352766121407114,0,0,0,0,0,0,0,0,1.46390398505774,3.97948742945565,0,0,0,0,0,0.915001205637253,0.251308704225729,2.25971616249959,2.81287003063364,0.83115217823824,0.973447578406546,0.407357455401265,0,0,0,0.650602214813519,1.60931473103431,0.540186389416048,1.65775299619287,2.38127747029647,2.17793324484245,2.34254311399322,1.03481348295606,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,4.83651678182637,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0.295220295959204,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0.668396022247182,0.283076530788832,1.21443210502468,0,0.395287777946524,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.354680467284547,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,0.183151624267265,0,0,3.3885110557024,2.30162618253588,2.86447756719698,3.78077001156113,3.42541259885321,2.2661816921691,3.37511250115903,1.35096360967266,1.35942722695261,4.65984280576638,0.31136204275253,0,0,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0,0.187283014939765,0.192075457214608,0.229741875822453,0.952587382566147,0.231768651889711,0,0.412085900803307,0.147198920134397,0.685738504770831,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.271608227691724,1.12228454331548,0.593175090620871,0.29551344712669,0,0.154936841185966,0.192906610981141,1.74867404556562,0.701794825336225,0,0,0,0|short_description=p3@Bhlhe22}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=59058 | |||
|HGNC= | |||
|MCL_coexpression_id=609 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C6A8 | |||
|association_with_transcript=171bp_to_ENSMUST00000026120,NM_021560,uc008orl.2_5end | |||
|cluster_id=chr3:17954496..17954515,+ | |||
|description=CAGE_peak_3_at_Bhlhe22_5end | |||
|id=chr3:17954496..17954515,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.04e-18!33;CL:0000047!1.04e-18!33;CL:0000031!1.04e-18!33;CL:0000404!1.04e-18!33;CL:0000393!8.99e-18!39;CL:0000211!8.99e-18!39;CL:0000117!5.34e-17!23;CL:0000337!5.34e-17!23;CL:0000221!5.22e-15!44;CL:0000133!5.22e-15!44;CL:0002319!7.65e-15!43;CL:0000055!4.95e-14!50;CL:0002321!5.85e-07!70;CL:0000220!5.85e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.45e-18,23;CL:0000337,2.45e-18,23;CL:0000540,1.69e-13,33;CL:0000047,1.69e-13,33;CL:0000031,1.69e-13,33;CL:0000404,1.69e-13,33;CL:0000393,7.27e-11,39;CL:0000211,7.27e-11,39;CL:0002609,1.21e-09,6;CL:0002319,1.59e-09,43;CL:0000221,3.15e-09,44;CL:0000133,3.15e-09,44;CL:0002612,6.01e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.21e-30!71;UBERON:0003075!1.21e-30!71;UBERON:0007284!1.21e-30!71;UBERON:0004121!1.11e-29!102;UBERON:0000924!1.11e-29!102;UBERON:0006601!1.11e-29!102;UBERON:0000073!4.37e-29!75;UBERON:0001016!4.37e-29!75;UBERON:0001017!1.61e-28!73;UBERON:0005743!1.61e-28!73;UBERON:0002020!8.46e-25!34;UBERON:0000033!2.98e-24!63;UBERON:0001049!4.60e-24!52;UBERON:0005068!4.60e-24!52;UBERON:0006241!4.60e-24!52;UBERON:0007135!4.60e-24!52;UBERON:0003056!9.77e-24!49;UBERON:0002616!1.02e-21!49;UBERON:0002791!5.74e-21!29;UBERON:0003528!5.74e-21!29;UBERON:0001893!5.74e-21!29;UBERON:0000955!6.00e-21!50;UBERON:0006238!6.00e-21!50;UBERON:0002780!2.27e-19!39;UBERON:0001890!2.27e-19!39;UBERON:0006240!2.27e-19!39;UBERON:0003080!1.54e-18!40;UBERON:0000956!1.67e-16!21;UBERON:0001869!1.67e-16!21;UBERON:0000203!1.67e-16!21;UBERON:0002619!6.84e-13!17;UBERON:0007811!1.07e-12!86;UBERON:0000153!3.70e-10!94;UBERON:0002021!3.92e-10!10;UBERON:0000411!3.92e-10!10;UBERON:0001950!3.92e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.24e-35,34;UBERON:0000956,6.33e-34,21;UBERON:0001869,6.33e-34,21;UBERON:0000203,6.33e-34,21;UBERON:0002346,3.71e-31,64;UBERON:0003075,3.71e-31,64;UBERON:0007284,3.71e-31,64;UBERON:0003528,5.16e-29,29;UBERON:0002791,5.16e-29,29;UBERON:0001893,5.16e-29,29;UBERON:0000073,2.83e-28,54;UBERON:0003056,3.93e-27,49;UBERON:0010371,1.99e-26,73;UBERON:0004121,2.13e-26,95;UBERON:0000924,2.13e-26,95;UBERON:0006601,2.13e-26,95;UBERON:0001049,3.33e-25,52;UBERON:0005068,3.33e-25,52;UBERON:0006241,3.33e-25,52;UBERON:0007135,3.33e-25,52;UBERON:0002619,4.36e-25,17;UBERON:0001017,3.39e-24,73;UBERON:0001016,2.31e-23,75;UBERON:0002021,6.09e-23,10;UBERON:0000411,6.09e-23,10;UBERON:0001950,6.09e-23,10;UBERON:0002616,1.89e-20,46;UBERON:0002780,2.77e-20,39;UBERON:0001890,2.77e-20,39;UBERON:0006240,2.77e-20,39;UBERON:0000955,6.72e-20,47;UBERON:0006238,6.72e-20,47;UBERON:0003080,1.19e-19,40;UBERON:0010314,1.78e-19,92;UBERON:0000970,1.96e-08,9;UBERON:0000019,1.96e-08,9;UBERON:0000047,1.96e-08,9;UBERON:0010312,1.96e-08,9;UBERON:0004088,1.96e-08,9;UBERON:0002104,1.96e-08,9;UBERON:0001456,1.96e-08,9;UBERON:0003072,1.96e-08,9;UBERON:0004128,1.96e-08,9;UBERON:0003071,1.96e-08,9;UBERON:0000025,3.84e-08,114;UBERON:0004111,3.22e-07,122;UBERON:0001948,4.22e-07,5;UBERON:0002315,4.22e-07,5;UBERON:0002257,6.01e-07,3;UBERON:0000483,6.93e-07,174;UBERON:0001444,8.93e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.917733760808408,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,2.69592992002042,4.72520784160917,2.94454945891935,1.99955689082663,0.662605622854841,1.10241719293459,1.15014565221884,0.919218786610021,2.20231761998777,0.510749352340751,1.0752457327937,0.395658863190582,0.457438218012048,2.6045668527838,0.558365998002762,1.12552522006336,0.61119299110724,1.17851434189467,1.13897344639282,2.05039390407831,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0,0.352766121407114,0,0,0,0,0,0,0,0,1.46390398505774,3.97948742945565,0,0,0,0,0,0.915001205637253,0.251308704225729,2.25971616249959,2.81287003063364,0.83115217823824,0.973447578406546,0.407357455401265,0,0,0,0.650602214813519,1.60931473103431,0.540186389416048,1.65775299619287,2.38127747029647,2.17793324484245,2.34254311399322,1.03481348295606,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,4.83651678182637,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0.295220295959204,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0.668396022247182,0.283076530788832,1.21443210502468,0,0.395287777946524,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.354680467284547,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,0.183151624267265,0,0,3.3885110557024,2.30162618253588,2.86447756719698,3.78077001156113,3.42541259885321,2.2661816921691,3.37511250115903,1.35096360967266,1.35942722695261,4.65984280576638,0.31136204275253,0,0,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0,0.187283014939765,0.192075457214608,0.229741875822453,0.952587382566147,0.231768651889711,0,0.412085900803307,0.147198920134397,0.685738504770831,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.271608227691724,1.12228454331548,0.593175090620871,0.29551344712669,0,0.154936841185966,0.192906610981141,1.74867404556562,0.701794825336225,0,0,0,0 | |||
|short_description=p3@Bhlhe22 | |||
}} |
Latest revision as of 20:50, 1 October 2015
Short description: | p3@Bhlhe22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bhlhe22_5end |
Coexpression cluster: | MCL_coexpression_mm9:609 |
Association with transcript: | 171bp_to_ENSMUST00000026120, NM_021560, uc008orl.2_5end |
EntrezGene: | Bhlhe22 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.45e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.45e-18 | 23 |
neuron | 1.69e-13 | 33 |
neuronal stem cell | 1.69e-13 | 33 |
neuroblast | 1.69e-13 | 33 |
electrically signaling cell | 1.69e-13 | 33 |
electrically responsive cell | 7.27e-11 | 39 |
electrically active cell | 7.27e-11 | 39 |
neuron of cerebral cortex | 1.21e-09 | 6 |
neural cell | 1.59e-09 | 43 |
ectodermal cell | 3.15e-09 | 44 |
neurectodermal cell | 3.15e-09 | 44 |
neuron of the ventral spinal cord | 6.01e-07 | 3 |