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FFCP PHASE1:Mm9::chr6:91106766..91106821,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=232232
|EntrezGene=232232
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D3Z2G7,Q543U1,Q91WA3
|UniProt=D3Z2G7,Q543U1,Q91WA3
|association_with_transcript=0bp_to_ENSMUST00000143621,ENSMUST00000154389,NM_144919,uc009cxv.1_5end
|association_with_transcript=0bp_to_ENSMUST00000143621,ENSMUST00000154389,NM_144919,uc009cxv.1_5end
|cluster_id=chr6:91106766..91106821,+
|description=CAGE_peak_1_at_Hdac11_5end
|description=CAGE_peak_1_at_Hdac11_5end
|id=chr6:91106766..91106821,+
|id=chr6:91106766..91106821,+
|ontology_enrichment_celltype=CL:0000117!3.29e-08!23;CL:0000337!3.29e-08!23
|ontology_enrichment_celltype=CL:0000117!3.29e-08!23;CL:0000337!3.29e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.23e-08,23;CL:0000337,3.23e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.75e-18!73;UBERON:0005743!9.75e-18!73;UBERON:0001049!6.95e-17!52;UBERON:0005068!6.95e-17!52;UBERON:0006241!6.95e-17!52;UBERON:0007135!6.95e-17!52;UBERON:0000033!4.57e-16!63;UBERON:0000073!5.31e-16!75;UBERON:0001016!5.31e-16!75;UBERON:0000955!5.94e-16!50;UBERON:0006238!5.94e-16!50;UBERON:0002616!2.28e-15!49;UBERON:0004111!6.80e-13!122;UBERON:0002346!1.19e-12!71;UBERON:0003075!1.19e-12!71;UBERON:0007284!1.19e-12!71;UBERON:0000025!5.41e-12!114;UBERON:0002020!1.02e-11!34;UBERON:0003080!1.02e-11!40;UBERON:0003056!1.05e-11!49;UBERON:0004121!3.17e-11!102;UBERON:0000924!3.17e-11!102;UBERON:0006601!3.17e-11!102;UBERON:0002780!4.29e-11!39;UBERON:0001890!4.29e-11!39;UBERON:0006240!4.29e-11!39;UBERON:0002791!4.27e-09!29;UBERON:0003528!4.27e-09!29;UBERON:0001893!4.27e-09!29;UBERON:0000468!1.21e-07!333;UBERON:0002021!8.89e-07!10;UBERON:0000411!8.89e-07!10;UBERON:0001950!8.89e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.07e-18,54;UBERON:0001017,9.32e-18,73;UBERON:0001049,6.66e-17,52;UBERON:0005068,6.66e-17,52;UBERON:0006241,6.66e-17,52;UBERON:0007135,6.66e-17,52;UBERON:0002346,8.86e-17,64;UBERON:0003075,8.86e-17,64;UBERON:0007284,8.86e-17,64;UBERON:0001016,5.34e-16,75;UBERON:0010371,5.24e-15,73;UBERON:0004121,3.10e-14,95;UBERON:0000924,3.10e-14,95;UBERON:0006601,3.10e-14,95;UBERON:0000955,4.74e-14,47;UBERON:0006238,4.74e-14,47;UBERON:0002616,1.74e-13,46;UBERON:0004111,7.32e-13,122;UBERON:0000025,5.83e-12,114;UBERON:0002020,9.87e-12,34;UBERON:0003080,9.94e-12,40;UBERON:0003056,1.03e-11,49;UBERON:0002780,4.18e-11,39;UBERON:0001890,4.18e-11,39;UBERON:0006240,4.18e-11,39;UBERON:0003528,4.18e-09,29;UBERON:0002791,4.18e-09,29;UBERON:0001893,4.18e-09,29;UBERON:0010314,8.70e-09,92;UBERON:0011216,2.36e-07,194;UBERON:0002021,8.76e-07,10;UBERON:0000411,8.76e-07,10;UBERON:0001950,8.76e-07,10
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126176742,9.37471570876441,4.29923312145414,0.966336483304024,25.3466405506922,1.89606672376907,6.68993210457542,4.00572732942826,3.89762468933385,3.93858730468459,3.77494574084403,4.92801343031872,2.51072196196781,2.82706059854813,1.82896335972,2.11734988787365,0.877120926657772,1.6356013078856,1.8700304349051,4.0811469050738,0.665957860122194,0.62799699626633,0.335769232728157,11.7845652359636,7.50729901804728,8.97442958909599,3.21552568618599,16.551879433167,29.3670958160875,31.302116082488,29.2176711854092,28.6994814513958,39.0497036269266,41.5466643564335,35.1011700120539,41.4295506966283,43.5016712624836,46.5984280576638,4.56664329370377,8.77854721482268,12.6342868258059,9.72426868273176,8.38452650511929,10.2952364732008,7.3341420174533,8.65347240403356,7.38114182061175,4.04315538822076,5.32306529769503,4.52703219326583,7.02311306024118,6.27446493567719,6.66251439885114,4.28664322154766,7.76424983830532,9.64546102318525,2.88460130562315,5.15196220470391,7.54312355247914,6.92155644021416,8.58370283810355,7.41266724824875,5.08190654242785,6.43071019976741,8.04883080640199,4.99832451731901,8.28405094459757,6.73370725989286,9.72807148618228,7.2893316957917,5.72923460437565,7.43696837692637,7.33045121728337,11.7410971630835,5.6143586026898,8.59484216193193,6.12122662620299,6.61774257358547,6.26043156175138
|phase1_expression=10.089377367602,6.63053274514786,5.0049916332849,23.8946726932396,30.0537437967808,12.4230661214798,10.5125688267987,1.29123323441576,0,0,0,0,0.684802919724823,0.34968160967599,0.999329285446988,0.809901069559304,0,1.10411757875383,2.05671650408608,1.27316895539409,23.216818211242,0.496454756004426,0.261199789138935,8.95957567643077,8.94696196161963,1.72269589234506,4.73838195774982,7.11055067863434,11.4014051673824,12.0974462284767,5.32153225572731,1.90509202037889,5.53558308826113,0,23.3969811998532,16.7896991812077,19.1919194886627,0,0,0,0,0,0,6.92432498865675,6.48812359804893,2.9367480345869,6.25913075478431,6.75877984779384,6.59058548203415,6.02732687130279,6.15940255151595,2.87505128729943,1.17447824240415,0,0,0.771778308107841,3.15186783932632,1.54701627683233,16.7922662513466,19.0436752537932,16.4796164911607,2.71075625655306,0.889294796111139,2.6996991518442,0.988866362566974,1.4209602298922,5.69240209984969,13.4476406862544,6.22137673850866,6.07526722492608,6.30974884054146,56.2732439275493,51.6832385826776,7.59442955132715,8.91362880469598,8.27296907949019,67.1706874096271,74.4417181036644,81.2578560925528,23.8714180791651,22.5974479697952,12.5019208933622,92.6887556684585,101.860032415734,83.1222467905847,32.4091444021034,33.8844600301865,25.3503246322409,0.37863096666592,0.302286240427142,14.4932244350839,20.6501730475533,12.2394840067395,27.5248627735287,21.4426217757731,25.0895056774508,16.8533304158102,3.2381761289831,4.67614808285164,2.12003744706204,11.2674735821344,5.13305909657271,0,0,1.94841936910093,2.78695852022608,2.02209778005913,14.3871688446016,3.10725460376606,5.93768556259299,4.3371331691534,2.43572382649713,1.15307748628029,2.41156224884196,3.05730638552832,3.14166478324189,0,2.16899035379867,4.42305275974937,5.50007289821191,3.97514733228708,2.42437626567611,7.45567044872489,40.4037499875935,35.3964934514739,12.2619386500124,0.718890747035522,0.599902730993408,0.381210681219194,84.48192062432,44.3775584734068,13.3193613239636,46.2372691711455,51.3988069233964,77.7127286652755,61.8139212288157,9.06370338267815,11.1966273549084,28.0522261861379,34.7229062212682,6.8963834770233,6.89706313300419,6.66229880279792,7.68594570962147,9.25296388458059,5.25266253167884,10.1197862524507,19.4027528054262,7.76044774558232,9.45530400839096,9.50136070485324,12.4941567483718,8.61946472599353,8.00979983000983,5.35033554660653,5.57295947091781,0,0.257347907114715,0.568326998791185,6.62802472113606,3.28336483973535,6.12211008967451,6.39210786080068,7.67380503814875,6.01641740260775,8.60375595576509,6.9751084363901,7.23945122676451,5.43047504714485,5.41752631461014,5.26947262048062,5.99419948443863,3.51280184465681,8.99183005694491,43.9505992499026,8.74689205223918,7.93005079161115,10.8424732332053,4.69234151177515,6.0381534683714,4.89696353023955,5.04208811558356,5.55945109612176,4.1849637744763,11.3886974770683,4.11747386810027,9.29940272560997,9.35095418593409,7.79856348476481,13.4822911298133,9.29393614461185,15.3338780405863,7.01771233526402,6.05517116831563,10.1436962105772,6.10953983535943,9.11576689687841,8.97738494596078,11.5090497566148,14.0229640580622,10.3619160375307,12.3397163921801,26.0878311836691,7.50802975722423,7.46924181430171,8.99448449539415,6.6943840058206,9.40590923034426,5.60176873919124,6.90470729881945,5.18832725680113,14.2771934857802,24.4405951096503,30.8876986564858,25.8991268685085,27.2785188182881,16.325164630494,21.7099584613515,7.57488079683079,7.76914788258988,4.23708938749267,5.09235257325564,4.22442446919304,3.85264392116176,4.04674189506223,3.90267295715598,5.67486518782288,5.97954662051692,6.218735977642,3.4411296090305,3.62638461918381,5.49666422609744,0,0.54390568381871,2.95058563811422,6.34654516500885,67.7523489748482,68.2172015966622,5.08198330667694,5.04941854408746,8.51872192423893,5.85658116444958,12.7099804662351,2.86762557543062,4.90157082981267,5.09537755419898,6.8817819284732,7.89090816360542,11.8586333383957,42.7357350841003,9.79386587937053,12.1084610493734,14.4969393824683,19.7964147567043,5.30980553359851,9.71122544619926,12.6975893925195,12.0707251043775,15.9463022155617,11.6825356218692,9.8202751403924,15.6319503675327,16.0423820273125,15.1697643809192,17.9211634577498,19.5957532171555,33.703520969625,5.04171063287669,9.70190128370659,10.502514716548,6.91626911204867,12.664186049747,11.8475294833527,21.6170113871366,0.469343416127421,0.21183207086382,12.7906470871878,6.26567761177624,5.65125493435669,4.52346936961169,7.5204576721976,7.2221995887827,15.1570035047522,69.7199135559516,1.70870880797853,8.04908785056568,3.70389054739423,3.20226376907975,3.14396723758358,2.74533807847827,3.56954702987096,6.71766971153558,5.11339903076368,10.5013767981662,6.64305586520384,6.70954241518601,5.50827238191186,4.59994251231831,3.05707589244649,8.09186078308924,12.4806718145257,10.9937495633292,9.85073797017626,19.8828580187816,18.0381740378941,6.13017838780313,6.28742263736971,5.05573089694524,5.68303223302017,6.08242051766801,5.04636126176742,9.37471570876441,4.29923312145414,0.966336483304024,25.3466405506922,1.89606672376907,6.68993210457542,4.00572732942826,3.89762468933385,3.93858730468459,3.77494574084403,4.92801343031872,2.51072196196781,2.82706059854813,1.82896335972,2.11734988787365,0.877120926657772,1.6356013078856,1.8700304349051,4.0811469050738,0.665957860122194,0.62799699626633,0.335769232728157,11.7845652359636,7.50729901804728,8.97442958909599,3.21552568618599,16.551879433167,29.3670958160875,31.302116082488,29.2176711854092,28.6994814513958,39.0497036269266,41.5466643564335,35.1011700120539,41.4295506966283,43.5016712624836,46.5984280576638,4.56664329370377,8.77854721482268,12.6342868258059,9.72426868273176,8.38452650511929,10.2952364732008,7.3341420174533,8.65347240403356,7.38114182061175,4.04315538822076,5.32306529769503,4.52703219326583,7.02311306024118,6.27446493567719,6.66251439885114,4.28664322154766,7.76424983830532,9.64546102318525,2.88460130562315,5.15196220470391,7.54312355247914,6.92155644021416,8.58370283810355,7.41266724824875,5.08190654242785,6.43071019976741,8.04883080640199,4.99832451731901,8.28405094459757,6.73370725989286,9.72807148618228,7.2893316957917,5.72923460437565,7.43696837692637,7.33045121728337,11.7410971630835,5.6143586026898,8.59484216193193,6.12122662620299,6.61774257358547,6.26043156175138
|short_description=p1@Hdac11
|short_description=p1@Hdac11
}}
}}

Latest revision as of 22:10, 1 October 2015

Short description:p1@Hdac11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hdac11_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000143621, ENSMUST00000154389, NM_144919, uc009cxv.1_5end
EntrezGene:Hdac11
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hdac11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I323.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I430.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.42
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.51
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.95
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I27.11
Ileum epithelium, pool1.CNhs13199.10252-104B911.40
Ileum epithelium, pool2.CNhs13232.10253-104C112.10
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.79
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F719.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.49
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.59
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C316.79
Mouse Granule cells, donor2.CNhs12357.11731-123E319.04
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F156.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D551.68
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.91
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D367.17
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F374.44
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D781.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.87
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E492.69
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5101.86
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I683.12
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D632.41
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.88
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.35
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F720.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C827.52
Mouse hepatocyte, donor6.CNhs13090.11822-124F421.44
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.09
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.39
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D75.94
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C13.06
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F55.50
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B240.40
cerebellum, neonate N30.CNhs11135.1395-42I235.40
colon, adult.CNhs10468.36-18H712.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A484.48
corpus striatum, adult.CNhs10487.19-21D844.38
corpus striatum, neonate N00.CNhs11226.630-43F113.32
cortex, adult.CNhs10473.12-14D546.24
cortex, neonate N30.CNhs11107.1392-42F251.40
diencephalon, adult.CNhs10482.20-12F277.71
diencephalon, neonate N30.CNhs11201.1388-42B261.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.20
epididymis, adult.CNhs10490.58-23B228.05
eyeball, adult.CNhs10484.31-12G434.72
eyeball, embryo E12.CNhs11016.345-16C66.90
eyeball, embryo E14.CNhs10521.399-16E26.90
eyeball, embryo E15.CNhs10593.426-16C96.66
eyeball, embryo E17.CNhs11023.1261-18D47.69
eyeball, neonate N00.CNhs11207.633-15C69.25
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G810.12
eyeball, neonate N16.CNhs11188.777-19A219.40
forelimb, embryo E11.CNhs10596.335-25E27.76
forelimb, embryo E12.CNhs10600.359-14H29.46
forelimb, embryo E13.CNhs10589.384-1E29.50
forelimb, embryo E14.CNhs10577.413-26A812.49
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E96.63
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I96.12
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C66.02
heart, embryo E17.CNhs11025.479-18E58.60
heart, embryo E18.CNhs11030.1283-20G36.98
heart, neonate N00.CNhs11213.639-21E37.24
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G15.42
heart, neonate N16.CNhs11209.782-15G15.27
heart, neonate N20.CNhs11127.821-26I65.99
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D28.99
hippocampus, adult.CNhs10478.13-16E843.95
hippocampus, neonate N00.CNhs11228.627-43G18.75
intestinal mucosa, adult.CNhs10506.860-29I37.93
intestine, adult.CNhs10496.178-9A310.84
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E39.29
intestine, neonate N30.CNhs11131.1384-42G115.33
kidney, embryo E14.CNhs10606.411-4I97.02
kidney, embryo E15.CNhs10997.434-16F86.06
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C79.12
kidney, neonate N00.CNhs11214.646-21G78.98
kidney, neonate N10.CNhs11206.758-6D511.51
kidney, neonate N20.CNhs11113.832-19I114.02
kidney, neonate N25.CNhs11122.1353-25F310.36
kidney, neonate N30.CNhs11203.1385-42H112.34
liver, adult pregnant day01.CNhs10466.508-5B226.09
liver, embryo E12.CNhs10601.355-15F87.51
liver, embryo E13.CNhs10524.378-3H67.47
liver, embryo E14.CNhs10594.409-16E18.99
liver, embryo E15.CNhs10520.433-16D76.69
liver, embryo E16.CNhs10523.462-17F59.41
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G46.90
liver, neonate N00.CNhs11117.641-24F45.19
liver, neonate N03.CNhs11123.1345-25G214.28
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H230.89
liver, neonate N10.CNhs11115.751-24B925.90
liver, neonate N20.CNhs11220.823-25A327.28
liver, neonate N25.CNhs11198.1368-26H116.33
liver, neonate N30.CNhs11106.1382-42D121.71
lung, adult.CNhs10474.28-22B17.57
lung, embryo E12.CNhs10522.354-16G27.77
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E55.67
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E66.22
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H25.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C267.75
medulla oblongata, neonate N30.CNhs11200.1396-42A368.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.71
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I942.74
ovary, adult.CNhs10507.91-2I79.79
ovary, embryo E18.CNhs11040.505-44H712.11
ovary, neonate N00.CNhs11217.1299-22I414.50
oviduct, adult pregnant day01.CNhs10500.988-6G619.80
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F49.71
pancreas, embryo E15.CNhs11042.1556-45F212.70
pancreas, embryo E16.CNhs11003.460-26E512.07
pancreas, embryo E17.CNhs10599.1558-45G315.95
pancreas, embryo E18.CNhs10580.1535-43I711.68
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D715.63
pancreas, neonate N02.CNhs11139.1539-43D816.04
pancreas, neonate N16.CNhs11136.787-43B615.17
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G833.70
pituitary gland, embryo E12.CNhs11018.346-16E65.04
pituitary gland, embryo E13.CNhs11009.370-44C79.70
pituitary gland, embryo E14.CNhs11037.398-44A510.50
pituitary gland, embryo E15.CNhs10592.427-16B96.92
pituitary gland, embryo E16.CNhs11036.449-43F612.66
pituitary gland, embryo E17.CNhs11039.1265-44F511.85
pituitary gland, neonate N00.CNhs11190.1308-22E921.62
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F812.79
skin, adult.CNhs10492.30-1C36.27
skin, neonate N00.CNhs11124.650-25G45.65
skin, neonate N03.CNhs11215.662-22H34.52
skin, neonate N06.CNhs11097.693-20I57.52
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I115.16
spinal cord, adult.CNhs10505.24-13C969.72
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C18.05
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.11
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E36.64
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D45.51
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B88.09
stomach, neonate N07.CNhs11210.718-18A912.48
stomach, neonate N25.CNhs11104.1355-25E410.99
stomach, neonate N30.CNhs11134.1386-42I19.85
submandibular gland, adult.CNhs10469.59-29C119.88
testis, adult.CNhs10504.57-7G518.04
testis, embryo E13.CNhs11031.389-23F56.13
testis, embryo E15.CNhs11034.443-27C56.29
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I55.68
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B75.05
testis, neonate N07.CNhs11222.726-26I49.37
testis, neonate N10.CNhs11204.763-44D94.30
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E225.35
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I46.69
thymus, embryo E15.CNhs11005.430-45I24.01
thymus, embryo E16.CNhs11002.456-26C53.90
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F84.93
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.83
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E411.78
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E58.97
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F816.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.37
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A329.22
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.05
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A541.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A741.43
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A946.60
whole body, embryo E11.CNhs11014.324-5I84.57
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H212.63
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B18.38
whole body, embryo E16.CNhs10514.453-14F210.30
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.27
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.66
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.44
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I511.74
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C28.59
whole body, neonate N01.CNhs10576.659-23C66.12
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.23e-0823
neuroblast (sensu Vertebrata)3.23e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.07e-1854
central nervous system9.32e-1873
neural tube6.66e-1752
neural rod6.66e-1752
future spinal cord6.66e-1752
neural keel6.66e-1752
neurectoderm8.86e-1764
neural plate8.86e-1764
presumptive neural plate8.86e-1764
nervous system5.34e-1675
ecto-epithelium5.24e-1573
ectoderm-derived structure3.10e-1495
ectoderm3.10e-1495
presumptive ectoderm3.10e-1495
brain4.74e-1447
future brain4.74e-1447
regional part of brain1.74e-1346
anatomical conduit7.32e-13122
tube5.83e-12114
gray matter9.87e-1234
anterior neural tube9.94e-1240
pre-chordal neural plate1.03e-1149
regional part of forebrain4.18e-1139
forebrain4.18e-1139
future forebrain4.18e-1139
brain grey matter4.18e-0929
regional part of telencephalon4.18e-0929
telencephalon4.18e-0929
structure with developmental contribution from neural crest8.70e-0992
organ system subdivision2.36e-07194
occipital lobe8.76e-0710
visual cortex8.76e-0710
neocortex8.76e-0710
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