FFCP PHASE1:Mm9::chrX:7783601..7783673,-: Difference between revisions
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{{FFCP|EntrezGene=53627|HGNC=|MCL_coexpression_id=39|UniProt=Q9JJJ7,A2AC31|association_with_transcript=0bp_to_ENSMUST00000077595,ENSMUST00000082320,ENSMUST00000089402,ENSMUST00000089403,ENSMUST00000122943,ENSMUST00000139744,ENSMUST00000154695,NM_016913,NM_023638,NM_145907,NM_145908,uc009soj.2,uc009sok.2,uc009sol.2,uc009som.2,uc009son.2,uc012heo.1_5end|description=CAGE_peak_1_at_Porcn_5end|id=chrX:7783601..7783673,-|ontology_enrichment_celltype=CL:0000221!5.42e-13!44;CL:0000133!5.42e-13!44;CL:0002319!8.31e-13!43;CL:0000117!4.32e-12!23;CL:0000337!4.32e-12!23;CL:0000055!9.35e-12!50;CL:0000540!7.70e-10!33;CL:0000047!7.70e-10!33;CL:0000031!7.70e-10!33;CL:0000404!7.70e-10!33;CL:0000393!2.79e-09!39;CL:0000211!2.79e-09!39;CL:0002321!8.53e-08!70;CL:0000220!8.53e-08!70|ontology_enrichment_celltype_v019_2=CL:0000221,4.83e-13,44;CL:0000133,4.83e-13,44;CL:0002319,7.41e-13,43;CL:0000117,3.88e-12,23;CL:0000337,3.88e-12,23;CL:0000540,7.08e-10,33;CL:0000047,7.08e-10,33;CL:0000031,7.08e-10,33;CL:0000404,7.08e-10,33;CL:0000393,2.58e-09,39;CL:0000211,2.58e-09,39;CL:0002321,9.90e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.12e-28!73;UBERON:0005743!2.12e-28!73;UBERON:0004121!1.59e-27!102;UBERON:0000924!1.59e-27!102;UBERON:0006601!1.59e-27!102;UBERON:0000073!2.05e-27!75;UBERON:0001016!2.05e-27!75;UBERON:0000033!1.25e-25!63;UBERON:0001049!4.15e-24!52;UBERON:0005068!4.15e-24!52;UBERON:0006241!4.15e-24!52;UBERON:0007135!4.15e-24!52;UBERON:0000955!2.83e-23!50;UBERON:0006238!2.83e-23!50;UBERON:0002616!8.91e-23!49;UBERON:0002346!5.20e-22!71;UBERON:0003075!5.20e-22!71;UBERON:0007284!5.20e-22!71;UBERON:0002020!1.80e-19!34;UBERON:0003056!8.87e-19!49;UBERON:0003080!1.76e-17!40;UBERON:0002780!5.52e-17!39;UBERON:0001890!5.52e-17!39;UBERON:0006240!5.52e-17!39;UBERON:0002791!5.78e-17!29;UBERON:0003528!5.78e-17!29;UBERON:0001893!5.78e-17!29;UBERON:0000956!4.88e-13!21;UBERON:0001869!4.88e-13!21;UBERON:0000203!4.88e-13!21;UBERON:0004111!2.83e-11!122;UBERON:0002619!3.40e-11!17;UBERON:0000025!2.58e-09!114;UBERON:0007811!4.49e-09!86;UBERON:0000153!2.12e-08!94;UBERON:0002021!7.45e-08!10;UBERON:0000411!7.45e-08!10;UBERON:0001950!7.45e-08!10;UBERON:0003076!2.96e-07!12;UBERON:0003057!2.96e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.67e-30,95;UBERON:0000924,2.67e-30,95;UBERON:0006601,2.67e-30,95;UBERON:0001017,1.61e-28,73;UBERON:0001016,1.57e-27,75;UBERON:0010371,9.19e-26,73;UBERON:0000073,1.28e-25,54;UBERON:0002346,2.54e-25,64;UBERON:0003075,2.54e-25,64;UBERON:0007284,2.54e-25,64;UBERON:0001049,3.30e-24,52;UBERON:0005068,3.30e-24,52;UBERON:0006241,3.30e-24,52;UBERON:0007135,3.30e-24,52;UBERON:0000955,1.57e-21,47;UBERON:0006238,1.57e-21,47;UBERON:0002616,4.84e-21,46;UBERON:0002020,1.50e-19,34;UBERON:0003056,7.45e-19,49;UBERON:0003080,1.50e-17,40;UBERON:0002780,4.72e-17,39;UBERON:0001890,4.72e-17,39;UBERON:0006240,4.72e-17,39;UBERON:0003528,4.94e-17,29;UBERON:0002791,4.94e-17,29;UBERON:0001893,4.94e-17,29;UBERON:0010314,1.69e-15,92;UBERON:0000956,4.34e-13,21;UBERON:0001869,4.34e-13,21;UBERON:0000203,4.34e-13,21;UBERON:0002619,3.08e-11,17;UBERON:0004111,5.44e-11,122;UBERON:0000025,4.74e-09,114;UBERON:0002021,6.99e-08,10;UBERON:0000411,6.99e-08,10;UBERON:0001950,6.99e-08,10;UBERON:0003076,2.79e-07,12;UBERON:0003057,2.79e-07,12|phase1_expression=8.96833543786846,3.14077866875425,6.82498859084304,2.41971369045464,0.500895729946347,2.18243053485457,3.03696432774183,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,17.2637879006672,0,0.261199789138935,4.15980299262857,5.27641346454491,2.29692785646008,5.1691439539089,4.09395342103189,0.760093677825496,1.00812051903972,0.221730510655305,1.27006134691926,1.84519436275371,15.8481681015439,2.02196133825892,0.997407872150954,1.42918549383658,0,0,0,0,0,0,6.04304726282771,4.96746962975621,5.50640256485045,27.3836970521814,18.532138292338,25.2639110144643,34.6085220352224,8.81914456239784,24.4379359420452,0,0,0,2.82985379639542,6.01720223871389,8.25075347643908,26.3011399117477,26.9785399428737,25.9870875437533,7.11573517345177,7.11435836888911,10.3488467487361,2.96659908770092,7.8152812644071,30.8588113833957,36.8849573108692,20.9453016863125,24.8410926530311,16.8259969081106,30.2790043468032,25.6207507503872,13.7189695120749,14.8560480078266,27.5765635983006,28.6301290598411,32.3048965355525,25.1914714540239,23.8714180791651,22.4144726825904,19.7947080811569,31.2684958881547,19.1339287410771,28.1148775909331,19.7401152267357,19.5049202694771,25.3503246322409,2.57469057332826,4.6854367266207,7.24661221754194,2.58127163094416,2.03991400112325,4.31762553310254,4.54843492213368,4.03224198387602,7.44355426698285,6.47635225796619,3.89679006904303,8.12681021373782,8.02807492727079,6.41632387071589,5.09610479413291,0,8.44315059943735,10.1343946190039,4.04419556011827,4.45317130904334,2.07150306917737,6.82833839698194,2.77576522825817,2.74018930480927,2.7673859670727,2.26083960828934,3.52766121407114,4.64966387919799,4.44950941921873,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53627 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JJJ7,A2AC31 | |||
|association_with_transcript=0bp_to_ENSMUST00000077595,ENSMUST00000082320,ENSMUST00000089402,ENSMUST00000089403,ENSMUST00000122943,ENSMUST00000139744,ENSMUST00000154695,NM_016913,NM_023638,NM_145907,NM_145908,uc009soj.2,uc009sok.2,uc009sol.2,uc009som.2,uc009son.2,uc012heo.1_5end | |||
|cluster_id=chrX:7783601..7783673,- | |||
|description=CAGE_peak_1_at_Porcn_5end | |||
|id=chrX:7783601..7783673,- | |||
|ontology_enrichment_celltype=CL:0000221!5.42e-13!44;CL:0000133!5.42e-13!44;CL:0002319!8.31e-13!43;CL:0000117!4.32e-12!23;CL:0000337!4.32e-12!23;CL:0000055!9.35e-12!50;CL:0000540!7.70e-10!33;CL:0000047!7.70e-10!33;CL:0000031!7.70e-10!33;CL:0000404!7.70e-10!33;CL:0000393!2.79e-09!39;CL:0000211!2.79e-09!39;CL:0002321!8.53e-08!70;CL:0000220!8.53e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.83e-13,44;CL:0000133,4.83e-13,44;CL:0002319,7.41e-13,43;CL:0000117,3.88e-12,23;CL:0000337,3.88e-12,23;CL:0000540,7.08e-10,33;CL:0000047,7.08e-10,33;CL:0000031,7.08e-10,33;CL:0000404,7.08e-10,33;CL:0000393,2.58e-09,39;CL:0000211,2.58e-09,39;CL:0002321,9.90e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.12e-28!73;UBERON:0005743!2.12e-28!73;UBERON:0004121!1.59e-27!102;UBERON:0000924!1.59e-27!102;UBERON:0006601!1.59e-27!102;UBERON:0000073!2.05e-27!75;UBERON:0001016!2.05e-27!75;UBERON:0000033!1.25e-25!63;UBERON:0001049!4.15e-24!52;UBERON:0005068!4.15e-24!52;UBERON:0006241!4.15e-24!52;UBERON:0007135!4.15e-24!52;UBERON:0000955!2.83e-23!50;UBERON:0006238!2.83e-23!50;UBERON:0002616!8.91e-23!49;UBERON:0002346!5.20e-22!71;UBERON:0003075!5.20e-22!71;UBERON:0007284!5.20e-22!71;UBERON:0002020!1.80e-19!34;UBERON:0003056!8.87e-19!49;UBERON:0003080!1.76e-17!40;UBERON:0002780!5.52e-17!39;UBERON:0001890!5.52e-17!39;UBERON:0006240!5.52e-17!39;UBERON:0002791!5.78e-17!29;UBERON:0003528!5.78e-17!29;UBERON:0001893!5.78e-17!29;UBERON:0000956!4.88e-13!21;UBERON:0001869!4.88e-13!21;UBERON:0000203!4.88e-13!21;UBERON:0004111!2.83e-11!122;UBERON:0002619!3.40e-11!17;UBERON:0000025!2.58e-09!114;UBERON:0007811!4.49e-09!86;UBERON:0000153!2.12e-08!94;UBERON:0002021!7.45e-08!10;UBERON:0000411!7.45e-08!10;UBERON:0001950!7.45e-08!10;UBERON:0003076!2.96e-07!12;UBERON:0003057!2.96e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.67e-30,95;UBERON:0000924,2.67e-30,95;UBERON:0006601,2.67e-30,95;UBERON:0001017,1.61e-28,73;UBERON:0001016,1.57e-27,75;UBERON:0010371,9.19e-26,73;UBERON:0000073,1.28e-25,54;UBERON:0002346,2.54e-25,64;UBERON:0003075,2.54e-25,64;UBERON:0007284,2.54e-25,64;UBERON:0001049,3.30e-24,52;UBERON:0005068,3.30e-24,52;UBERON:0006241,3.30e-24,52;UBERON:0007135,3.30e-24,52;UBERON:0000955,1.57e-21,47;UBERON:0006238,1.57e-21,47;UBERON:0002616,4.84e-21,46;UBERON:0002020,1.50e-19,34;UBERON:0003056,7.45e-19,49;UBERON:0003080,1.50e-17,40;UBERON:0002780,4.72e-17,39;UBERON:0001890,4.72e-17,39;UBERON:0006240,4.72e-17,39;UBERON:0003528,4.94e-17,29;UBERON:0002791,4.94e-17,29;UBERON:0001893,4.94e-17,29;UBERON:0010314,1.69e-15,92;UBERON:0000956,4.34e-13,21;UBERON:0001869,4.34e-13,21;UBERON:0000203,4.34e-13,21;UBERON:0002619,3.08e-11,17;UBERON:0004111,5.44e-11,122;UBERON:0000025,4.74e-09,114;UBERON:0002021,6.99e-08,10;UBERON:0000411,6.99e-08,10;UBERON:0001950,6.99e-08,10;UBERON:0003076,2.79e-07,12;UBERON:0003057,2.79e-07,12 | |||
|phase1_expression=8.96833543786846,3.14077866875425,6.82498859084304,2.41971369045464,0.500895729946347,2.18243053485457,3.03696432774183,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,17.2637879006672,0,0.261199789138935,4.15980299262857,5.27641346454491,2.29692785646008,5.1691439539089,4.09395342103189,0.760093677825496,1.00812051903972,0.221730510655305,1.27006134691926,1.84519436275371,15.8481681015439,2.02196133825892,0.997407872150954,1.42918549383658,0,0,0,0,0,0,6.04304726282771,4.96746962975621,5.50640256485045,27.3836970521814,18.532138292338,25.2639110144643,34.6085220352224,8.81914456239784,24.4379359420452,0,0,0,2.82985379639542,6.01720223871389,8.25075347643908,26.3011399117477,26.9785399428737,25.9870875437533,7.11573517345177,7.11435836888911,10.3488467487361,2.96659908770092,7.8152812644071,30.8588113833957,36.8849573108692,20.9453016863125,24.8410926530311,16.8259969081106,30.2790043468032,25.6207507503872,13.7189695120749,14.8560480078266,27.5765635983006,28.6301290598411,32.3048965355525,25.1914714540239,23.8714180791651,22.4144726825904,19.7947080811569,31.2684958881547,19.1339287410771,28.1148775909331,19.7401152267357,19.5049202694771,25.3503246322409,2.57469057332826,4.6854367266207,7.24661221754194,2.58127163094416,2.03991400112325,4.31762553310254,4.54843492213368,4.03224198387602,7.44355426698285,6.47635225796619,3.89679006904303,8.12681021373782,8.02807492727079,6.41632387071589,5.09610479413291,0,8.44315059943735,10.1343946190039,4.04419556011827,4.45317130904334,2.07150306917737,6.82833839698194,2.77576522825817,2.74018930480927,2.7673859670727,2.26083960828934,3.52766121407114,4.64966387919799,4.44950941921873,8.53136205827479,2.65383165584962,3.558870698843,3.75430581382669,2.42437626567611,0,73.7807608469099,85.2448096730762,2.55457055208591,0.11981512450592,0,0.127070227073065,23.9665023047716,25.1625331550245,26.2617595915887,35.2863369990321,35.2887331115856,22.8566849015516,26.120843353909,5.90668310331835,4.97627882440372,6.57079171927554,7.57590681191306,7.026503919986,5.9774547152703,5.58192602396583,6.48030716693575,9.32100038373192,9.22418786050918,9.46387418053261,15.78090561508,4.095791865724,3.9712276835242,6.33424046990216,3.94552318369635,3.05851974148158,5.57203466435466,6.37924622864625,4.37875387000685,0,0,0,2.48550927042602,2.11073453982987,1.80062061461015,1.65721314909647,1.96764231747404,2.1597395804233,2.32533944750408,1.60964040839772,3.73649095574942,1.48103864922132,3.2833492815819,2.99954595319666,3.21639972335731,2.19550115291051,3.08674763148855,43.1094394556461,26.1377715443382,3.30418782983798,1.32225283331772,2.55945900642281,3.94802342162745,2.83508414908605,3.02525286935014,1.77902435075896,3.80451252225118,5.21981967698963,3.29397909448022,2.01068167040216,4.17808591286417,2.9244613067868,1.79763881730844,2.16138049874694,4.38110801159608,2.0863469104839,3.08470984046268,1.1270773567308,2.03651327845314,3.87904974335251,3.92760591385784,4.48979413582227,3.39503340353085,3.92496819603437,5.79966670432462,5.33614728756868,0.333690211432188,1.17935397067922,0,0.811440485554012,0.964708639009667,0.763877555344259,0.863088412352432,5.0261920300261,2.47105271869273,0,0.744281895337007,1.24815069245824,2.02063102357689,1.79397413521912,2.41221760681684,21.985629629826,3.03186258832776,5.0519142697028,3.05541154395339,4.92849521405854,6.19773152534718,6.9032655856944,15.4155581807661,7.09358148477859,9.08005227559977,11.9591076493115,12.1258852889646,11.569893785015,14.8988530338957,1.50791283939272,3.26343410291226,1.96705709207614,1.93155722413313,21.6743296483519,24.4972424977705,3.44263385291018,6.81671503451807,5.67914794949262,4.29482618726302,7.97066571611356,4.54040716109849,4.45597348164788,3.39691836946599,4.85772842009873,4.38383786866968,5.53402889125133,21.8498495166829,14.1940085208269,3.73937767701236,5.04949573996086,16.1670720513085,6.63725691699814,2.18502572539483,4.23252979750651,3.20628635585027,4.42952839321159,5.22639751504677,6.46070732920553,5.45300594216258,2.85197902707777,5.37262488490887,3.16255825724996,7.21948802737308,8.17055053809091,5.40183282093931,7.76152102696527,4.71541477069503,5.14286677562593,5.35106452806212,5.10101963866575,13.3964577610424,4.92810586933792,8.04961869282517,8.38007912608855,11.2122652000206,8.88054346827481,8.7453741145826,8.71418111222896,8.53532678674319,5.24665505933731,19.655082013114,0.341741761595705,3.30218988741156,1.11116716421827,0.753473828018764,0.546776910884101,0.457556346413045,0.339956859987711,0.419854356970974,0.276399947608848,16.2294005062569,5.06137589729817,6.30290348093231,7.56037385752609,9.19988502463662,7.64268973111622,9.84509728609191,9.6704543198643,11.5172614472973,2.72191443912765,4.97071450469541,2.25477175473676,1.79419855252775,1.98550188548517,3.50012139019286,1.93739735216597,2.53434188236167,5.04636126176742,2.8644964665669,4.92838918800841,6.52277126230216,6.33666013767304,0.632022241256357,1.21635129174099,1.64337531463724,0.649604114888975,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| |||
|short_description=p1@Porcn | |||
}} |
Latest revision as of 00:39, 2 October 2015
Short description: | p1@Porcn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Porcn_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 0bp_to_ENSMUST00000077595, ENSMUST00000082320, ENSMUST00000089402, ENSMUST00000089403, ENSMUST00000122943, ENSMUST00000139744, ENSMUST00000154695, NM_016913, NM_023638, NM_145907, NM_145908, uc009soj.2, uc009sok.2, uc009sol.2, uc009som.2, uc009son.2, uc012heo.1_5end |
EntrezGene: | Porcn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.83e-13 | 44 |
neurectodermal cell | 4.83e-13 | 44 |
neural cell | 7.41e-13 | 43 |
CNS neuron (sensu Vertebrata) | 3.88e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.88e-12 | 23 |
neuron | 7.08e-10 | 33 |
neuronal stem cell | 7.08e-10 | 33 |
neuroblast | 7.08e-10 | 33 |
electrically signaling cell | 7.08e-10 | 33 |
electrically responsive cell | 2.58e-09 | 39 |
electrically active cell | 2.58e-09 | 39 |
embryonic cell | 9.90e-08 | 70 |