FF:10015-101C6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004818 | ||
|accession_numbers=CAGE;DRX008649;DRR009521;DRZ000946;DRZ002331;DRZ012296;DRZ013681 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0001043,UBERON:0002100,UBERON:0000479,UBERON:0001007,UBERON:0004119,UBERON:0011216,UBERON:0000466,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0005178,UBERON:0005177,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0001555,UBERON:0001041,UBERON:0002224,UBERON:0000915 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010015 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/esophagus%252c%2520adult%252c%2520pool1.CNhs10620.10015-101C6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/esophagus%252c%2520adult%252c%2520pool1.CNhs10620.10015-101C6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/esophagus%252c%2520adult%252c%2520pool1.CNhs10620.10015-101C6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/esophagus%252c%2520adult%252c%2520pool1.CNhs10620.10015-101C6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/esophagus%252c%2520adult%252c%2520pool1.CNhs10620.10015-101C6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10015-101C6 | |id=FF:10015-101C6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010015 | ||
|is_obsolete= | |||
|library_id=CNhs10620 | |||
|library_id_phase_based=2:CNhs10620 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10015 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10015 | |||
|name=esophagus, adult, pool1 | |name=esophagus, adult, pool1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10620,LSID656,release008,COMPLETED | |profile_hcage=CNhs10620,LSID656,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:AM6000 Lot:0910061 -6 | |rna_catalog_number=Cat:AM6000 Lot:0910061 -6 | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.85475130521142e-212!GO:0005737;cytoplasm;6.96772342161866e-201!GO:0043226;organelle;1.89459286970536e-137!GO:0043229;intracellular organelle;5.97308249496059e-137!GO:0044444;cytoplasmic part;2.79201585554737e-122!GO:0043227;membrane-bound organelle;4.64309283074463e-113!GO:0043231;intracellular membrane-bound organelle;5.16812550235356e-113!GO:0005515;protein binding;6.80264073837601e-111!GO:0044422;organelle part;3.06621518866995e-92!GO:0044446;intracellular organelle part;1.21119687940305e-90!GO:0032991;macromolecular complex;3.93873369093116e-73!GO:0030529;ribonucleoprotein complex;1.74870572340412e-52!GO:0044238;primary metabolic process;5.96694630710541e-48!GO:0044237;cellular metabolic process;1.63230989125024e-47!GO:0016043;cellular component organization and biogenesis;2.92687684745557e-46!GO:0043170;macromolecule metabolic process;1.19957538139759e-44!GO:0019538;protein metabolic process;4.58943968437329e-43!GO:0043233;organelle lumen;4.58943968437329e-43!GO:0031974;membrane-enclosed lumen;4.58943968437329e-43!GO:0005739;mitochondrion;9.25306725569152e-43!GO:0003723;RNA binding;5.00458201035576e-42!GO:0043234;protein complex;7.95520064740941e-41!GO:0044428;nuclear part;7.90075982007952e-39!GO:0005829;cytosol;1.76295067287279e-38!GO:0044260;cellular macromolecule metabolic process;1.18293346438026e-36!GO:0033036;macromolecule localization;1.40750469398607e-36!GO:0015031;protein transport;3.21131047711293e-36!GO:0044267;cellular protein metabolic process;1.31483542467857e-35!GO:0031090;organelle membrane;3.22806633012649e-35!GO:0005634;nucleus;5.59231546712976e-35!GO:0008104;protein localization;1.85307975958219e-34!GO:0045184;establishment of protein localization;2.4438877849386e-34!GO:0043228;non-membrane-bound organelle;4.01481885749095e-34!GO:0043232;intracellular non-membrane-bound organelle;4.01481885749095e-34!GO:0005840;ribosome;8.65236996528301e-34!GO:0006412;translation;2.30391120081117e-32!GO:0044429;mitochondrial part;1.30115638865653e-31!GO:0065003;macromolecular complex assembly;6.0163579471992e-30!GO:0003735;structural constituent of ribosome;1.10064457958979e-29!GO:0031967;organelle envelope;2.0793201220884e-29!GO:0022607;cellular component assembly;2.81009987403912e-29!GO:0031975;envelope;3.82892640472404e-29!GO:0033279;ribosomal subunit;2.94120499831065e-27!GO:0046907;intracellular transport;2.01335470156618e-26!GO:0016071;mRNA metabolic process;2.24987250317966e-24!GO:0006886;intracellular protein transport;4.65243750208546e-24!GO:0008380;RNA splicing;6.67989961053764e-24!GO:0009058;biosynthetic process;1.09168856939759e-23!GO:0031981;nuclear lumen;2.89219689757616e-23!GO:0006396;RNA processing;4.98320560234947e-23!GO:0009059;macromolecule biosynthetic process;6.10471911340494e-23!GO:0006996;organelle organization and biogenesis;1.69105622133587e-22!GO:0044249;cellular biosynthetic process;4.86878659861107e-22!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.76018491001665e-21!GO:0005740;mitochondrial envelope;7.68172088389822e-21!GO:0008134;transcription factor binding;1.14507344708837e-20!GO:0006397;mRNA processing;1.20270063333332e-20!GO:0031966;mitochondrial membrane;3.02594710393463e-20!GO:0019866;organelle inner membrane;3.75281784956574e-20!GO:0048770;pigment granule;4.40705475744855e-20!GO:0042470;melanosome;4.40705475744855e-20!GO:0044445;cytosolic part;6.21464862540964e-20!GO:0005783;endoplasmic reticulum;3.50654853182352e-19!GO:0005743;mitochondrial inner membrane;7.47428827976827e-19!GO:0043283;biopolymer metabolic process;8.42769794050906e-19!GO:0006119;oxidative phosphorylation;7.02869204235242e-18!GO:0051641;cellular localization;1.36427569803991e-17!GO:0051649;establishment of cellular localization;1.37254831809341e-17!GO:0008092;cytoskeletal protein binding;2.85696743780699e-17!GO:0010467;gene expression;3.87406365669682e-17!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.24199471396446e-17!GO:0005681;spliceosome;1.13482268766437e-16!GO:0015935;small ribosomal subunit;1.58930993793601e-15!GO:0000166;nucleotide binding;1.58930993793601e-15!GO:0048523;negative regulation of cellular process;4.72177736502672e-15!GO:0005654;nucleoplasm;4.85991584584416e-15!GO:0044455;mitochondrial membrane part;1.1961693517172e-14!GO:0031980;mitochondrial lumen;1.19948469221998e-14!GO:0005759;mitochondrial matrix;1.19948469221998e-14!GO:0005746;mitochondrial respiratory chain;2.46405744684649e-14!GO:0022618;protein-RNA complex assembly;2.53523670982611e-14!GO:0012505;endomembrane system;3.59098576151625e-14!GO:0016192;vesicle-mediated transport;3.93655920072678e-14!GO:0048519;negative regulation of biological process;6.92624887046568e-14!GO:0012501;programmed cell death;1.3457948132679e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.64500592451038e-13!GO:0005794;Golgi apparatus;1.70072586408512e-13!GO:0006457;protein folding;1.84093074727557e-13!GO:0006915;apoptosis;1.84695868787645e-13!GO:0016462;pyrophosphatase activity;2.31647385278242e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.38288614828169e-13!GO:0017111;nucleoside-triphosphatase activity;2.86599132406631e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;3.48693222420023e-13!GO:0006461;protein complex assembly;3.72237662015294e-13!GO:0044451;nucleoplasm part;4.19424814699563e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;7.07106301870719e-13!GO:0008219;cell death;7.47355547614962e-13!GO:0016265;death;7.47355547614962e-13!GO:0015934;large ribosomal subunit;7.71668538790583e-13!GO:0003712;transcription cofactor activity;8.10270343834247e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.12549208872662e-12!GO:0003954;NADH dehydrogenase activity;1.12549208872662e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.12549208872662e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.13079610401428e-12!GO:0044265;cellular macromolecule catabolic process;1.18817689931694e-12!GO:0019941;modification-dependent protein catabolic process;1.34346987384092e-12!GO:0043632;modification-dependent macromolecule catabolic process;1.34346987384092e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.89796807872807e-12!GO:0044257;cellular protein catabolic process;2.50682667315002e-12!GO:0048193;Golgi vesicle transport;2.81524522081521e-12!GO:0006605;protein targeting;3.44337732786035e-12!GO:0008135;translation factor activity, nucleic acid binding;3.60590450611523e-12!GO:0000502;proteasome complex (sensu Eukaryota);6.02051585665708e-12!GO:0006512;ubiquitin cycle;7.69465749214039e-12!GO:0017076;purine nucleotide binding;1.03082354012186e-11!GO:0006366;transcription from RNA polymerase II promoter;1.54381056991937e-11!GO:0030036;actin cytoskeleton organization and biogenesis;1.94099810184105e-11!GO:0043412;biopolymer modification;2.45257885603065e-11!GO:0032553;ribonucleotide binding;2.91656402612461e-11!GO:0032555;purine ribonucleotide binding;2.91656402612461e-11!GO:0016874;ligase activity;3.29723503420216e-11!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.61127059914339e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.82708683729199e-11!GO:0003779;actin binding;6.09200594149393e-11!GO:0044432;endoplasmic reticulum part;7.30632170384142e-11!GO:0030964;NADH dehydrogenase complex (quinone);9.08717998285535e-11!GO:0045271;respiratory chain complex I;9.08717998285535e-11!GO:0005747;mitochondrial respiratory chain complex I;9.08717998285535e-11!GO:0043687;post-translational protein modification;9.27802016599585e-11!GO:0006464;protein modification process;1.06716517277736e-10!GO:0042775;organelle ATP synthesis coupled electron transport;1.18735145032818e-10!GO:0042773;ATP synthesis coupled electron transport;1.18735145032818e-10!GO:0030029;actin filament-based process;1.90827190701041e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.1646161706355e-10!GO:0044248;cellular catabolic process;2.74104139175757e-10!GO:0015629;actin cytoskeleton;7.46404916529049e-10!GO:0005761;mitochondrial ribosome;8.38957492571327e-10!GO:0000313;organellar ribosome;8.38957492571327e-10!GO:0003743;translation initiation factor activity;8.50170806506908e-10!GO:0003924;GTPase activity;9.54916426185061e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.00214529790044e-09!GO:0009055;electron carrier activity;1.33330084537936e-09!GO:0051082;unfolded protein binding;1.61015490890688e-09!GO:0043285;biopolymer catabolic process;1.98114000343166e-09!GO:0031988;membrane-bound vesicle;2.05524500572498e-09!GO:0030163;protein catabolic process;2.0840227003008e-09!GO:0006446;regulation of translational initiation;2.25459038251837e-09!GO:0006413;translational initiation;2.56416476613425e-09!GO:0031982;vesicle;2.57301026421984e-09!GO:0005856;cytoskeleton;2.57301026421984e-09!GO:0016564;transcription repressor activity;2.65712865104467e-09!GO:0051186;cofactor metabolic process;3.44914321033034e-09!GO:0009057;macromolecule catabolic process;3.84902316926428e-09!GO:0006913;nucleocytoplasmic transport;4.2479925224701e-09!GO:0005635;nuclear envelope;4.54339961515017e-09!GO:0016023;cytoplasmic membrane-bound vesicle;4.81604267955511e-09!GO:0008565;protein transporter activity;5.23575306400934e-09!GO:0050789;regulation of biological process;5.58351651824077e-09!GO:0005793;ER-Golgi intermediate compartment;6.58533664282697e-09!GO:0031410;cytoplasmic vesicle;9.01317568332226e-09!GO:0016604;nuclear body;9.78704899518572e-09!GO:0006259;DNA metabolic process;1.08792636687488e-08!GO:0051169;nuclear transport;1.18704896559545e-08!GO:0005768;endosome;1.22288911465197e-08!GO:0005730;nucleolus;1.40383045385115e-08!GO:0007264;small GTPase mediated signal transduction;1.60529586382907e-08!GO:0051246;regulation of protein metabolic process;1.62200885374839e-08!GO:0005525;GTP binding;2.86282873962648e-08!GO:0050794;regulation of cellular process;3.03982405304804e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;4.12064894428957e-08!GO:0000375;RNA splicing, via transesterification reactions;4.12064894428957e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.12064894428957e-08!GO:0016607;nuclear speck;6.90427702635501e-08!GO:0007010;cytoskeleton organization and biogenesis;7.60834352447779e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.22632002599734e-08!GO:0031324;negative regulation of cellular metabolic process;8.29404528813167e-08!GO:0045333;cellular respiration;8.44051181511447e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.51127923286257e-08!GO:0007049;cell cycle;8.9530158358248e-08!GO:0009060;aerobic respiration;9.48237734021425e-08!GO:0005789;endoplasmic reticulum membrane;9.60887932327109e-08!GO:0017038;protein import;9.84143696329172e-08!GO:0042802;identical protein binding;1.07721141959017e-07!GO:0042981;regulation of apoptosis;1.13960752264024e-07!GO:0009892;negative regulation of metabolic process;1.31747025657137e-07!GO:0006793;phosphorus metabolic process;1.39225563188034e-07!GO:0006796;phosphate metabolic process;1.39225563188034e-07!GO:0043067;regulation of programmed cell death;2.08016649685541e-07!GO:0008639;small protein conjugating enzyme activity;2.19492573954374e-07!GO:0032561;guanyl ribonucleotide binding;2.78998006760838e-07!GO:0019001;guanyl nucleotide binding;2.78998006760838e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.8565090712725e-07!GO:0016481;negative regulation of transcription;2.90751345943238e-07!GO:0031252;leading edge;2.91367056643738e-07!GO:0003714;transcription corepressor activity;3.46094098830682e-07!GO:0004842;ubiquitin-protein ligase activity;3.4856507713695e-07!GO:0031965;nuclear membrane;3.63149372367416e-07!GO:0019787;small conjugating protein ligase activity;4.33623608608794e-07!GO:0016310;phosphorylation;4.93073684962534e-07!GO:0030554;adenyl nucleotide binding;5.23989866174502e-07!GO:0003713;transcription coactivator activity;5.35328694768285e-07!GO:0006732;coenzyme metabolic process;5.58020943192498e-07!GO:0006099;tricarboxylic acid cycle;6.53670183530338e-07!GO:0046356;acetyl-CoA catabolic process;6.53670183530338e-07!GO:0043069;negative regulation of programmed cell death;7.35899931621957e-07!GO:0019899;enzyme binding;8.31670988029609e-07!GO:0043066;negative regulation of apoptosis;8.54157549030175e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.10527972617977e-06!GO:0032559;adenyl ribonucleotide binding;1.13886143880801e-06!GO:0048522;positive regulation of cellular process;1.15166444374724e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.15410057851796e-06!GO:0005524;ATP binding;1.22240577058329e-06!GO:0048475;coated membrane;1.254558266569e-06!GO:0030117;membrane coat;1.254558266569e-06!GO:0015986;ATP synthesis coupled proton transport;1.38841414451553e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.38841414451553e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.40348775856732e-06!GO:0019829;cation-transporting ATPase activity;1.55429901978946e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.79566328655039e-06!GO:0016491;oxidoreductase activity;2.36238939091072e-06!GO:0005912;adherens junction;2.46782905853155e-06!GO:0006950;response to stress;3.50687300523578e-06!GO:0030120;vesicle coat;3.53817044270223e-06!GO:0030662;coated vesicle membrane;3.53817044270223e-06!GO:0006916;anti-apoptosis;3.54796895865351e-06!GO:0051170;nuclear import;3.55383466090485e-06!GO:0065007;biological regulation;3.64363923566441e-06!GO:0006084;acetyl-CoA metabolic process;3.84128927358814e-06!GO:0006606;protein import into nucleus;4.41250812858829e-06!GO:0009109;coenzyme catabolic process;4.78368610197071e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;4.84101207712999e-06!GO:0015980;energy derivation by oxidation of organic compounds;4.95452820100279e-06!GO:0051187;cofactor catabolic process;5.26083846265978e-06!GO:0045786;negative regulation of progression through cell cycle;5.33668862591691e-06!GO:0051789;response to protein stimulus;5.51232815786085e-06!GO:0006986;response to unfolded protein;5.51232815786085e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.56993389075677e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.95394343707615e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.28352637726166e-06!GO:0016881;acid-amino acid ligase activity;7.03111065586699e-06!GO:0009150;purine ribonucleotide metabolic process;7.12228075581718e-06!GO:0048518;positive regulation of biological process;7.37318506985924e-06!GO:0006163;purine nucleotide metabolic process;8.08507285659592e-06!GO:0009141;nucleoside triphosphate metabolic process;8.38888651141086e-06!GO:0046034;ATP metabolic process;8.87131650718482e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.94552452578541e-06!GO:0009144;purine nucleoside triphosphate metabolic process;8.94552452578541e-06!GO:0048471;perinuclear region of cytoplasm;9.20186953252492e-06!GO:0030216;keratinocyte differentiation;9.37137050968637e-06!GO:0009199;ribonucleoside triphosphate metabolic process;9.58035724877479e-06!GO:0005770;late endosome;9.65096452530268e-06!GO:0009259;ribonucleotide metabolic process;9.8326166298932e-06!GO:0009056;catabolic process;9.87648978524128e-06!GO:0005773;vacuole;1.03839514987249e-05!GO:0016044;membrane organization and biogenesis;1.04425534334725e-05!GO:0044453;nuclear membrane part;1.04907794814434e-05!GO:0016563;transcription activator activity;1.19988228550153e-05!GO:0000074;regulation of progression through cell cycle;1.37246671146604e-05!GO:0006323;DNA packaging;1.38438508375099e-05!GO:0051726;regulation of cell cycle;1.65123629990381e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.69097690194068e-05!GO:0006091;generation of precursor metabolites and energy;1.81349346984033e-05!GO:0016070;RNA metabolic process;1.86356983651786e-05!GO:0045892;negative regulation of transcription, DNA-dependent;1.92344597353844e-05!GO:0007243;protein kinase cascade;2.64013390281683e-05!GO:0016887;ATPase activity;2.6649090742111e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.67182424532577e-05!GO:0003676;nucleic acid binding;2.74180686555997e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.76353756118348e-05!GO:0008361;regulation of cell size;2.7817095029752e-05!GO:0051128;regulation of cellular component organization and biogenesis;3.30069854160644e-05!GO:0045259;proton-transporting ATP synthase complex;3.36060491590697e-05!GO:0030133;transport vesicle;3.53740261535221e-05!GO:0016049;cell growth;3.61328522245848e-05!GO:0006754;ATP biosynthetic process;4.5366923995071e-05!GO:0006753;nucleoside phosphate metabolic process;4.5366923995071e-05!GO:0006333;chromatin assembly or disassembly;4.68188259189647e-05!GO:0000323;lytic vacuole;5.03305144314758e-05!GO:0005764;lysosome;5.03305144314758e-05!GO:0005798;Golgi-associated vesicle;5.03305144314758e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.03305144314758e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.03305144314758e-05!GO:0009142;nucleoside triphosphate biosynthetic process;5.45608745221107e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.45608745221107e-05!GO:0008307;structural constituent of muscle;5.57099588905168e-05!GO:0044440;endosomal part;6.84254275375319e-05!GO:0010008;endosome membrane;6.84254275375319e-05!GO:0022402;cell cycle process;7.24643004156886e-05!GO:0043566;structure-specific DNA binding;7.49210844950113e-05!GO:0005791;rough endoplasmic reticulum;7.70380314399724e-05!GO:0042623;ATPase activity, coupled;7.86595298242207e-05!GO:0009152;purine ribonucleotide biosynthetic process;7.89659781061929e-05!GO:0051276;chromosome organization and biogenesis;8.17305081941351e-05!GO:0006164;purine nucleotide biosynthetic process;8.45825932641661e-05!GO:0032446;protein modification by small protein conjugation;8.4780795503729e-05!GO:0044431;Golgi apparatus part;8.78355500786386e-05!GO:0006613;cotranslational protein targeting to membrane;8.86982977657824e-05!GO:0044449;contractile fiber part;9.08502809631296e-05!GO:0000245;spliceosome assembly;9.13382744365117e-05!GO:0042254;ribosome biogenesis and assembly;9.24710742004866e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.24710742004866e-05!GO:0006979;response to oxidative stress;0.000100247880412797!GO:0007242;intracellular signaling cascade;0.000106919020347754!GO:0001533;cornified envelope;0.00011986099112395!GO:0016567;protein ubiquitination;0.000125973832396268!GO:0007265;Ras protein signal transduction;0.00013138863900967!GO:0009260;ribonucleotide biosynthetic process;0.000135000374916169!GO:0016197;endosome transport;0.000136119799414053!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00014496889767449!GO:0005643;nuclear pore;0.000150713989859106!GO:0051427;hormone receptor binding;0.000165060998241784!GO:0030532;small nuclear ribonucleoprotein complex;0.000170984171796607!GO:0004298;threonine endopeptidase activity;0.000181249659912081!GO:0001558;regulation of cell growth;0.000189160105529044!GO:0065004;protein-DNA complex assembly;0.000203461123279887!GO:0005913;cell-cell adherens junction;0.000209619167307325!GO:0005788;endoplasmic reticulum lumen;0.000210787708933463!GO:0016126;sterol biosynthetic process;0.000217922061392082!GO:0045893;positive regulation of transcription, DNA-dependent;0.00024454934703015!GO:0043292;contractile fiber;0.000260999653800777!GO:0009966;regulation of signal transduction;0.000269927313586803!GO:0003697;single-stranded DNA binding;0.000288131216488365!GO:0000785;chromatin;0.000302449984347917!GO:0035257;nuclear hormone receptor binding;0.00032380130420419!GO:0045941;positive regulation of transcription;0.000329288209966617!GO:0046983;protein dimerization activity;0.000346167284646354!GO:0030016;myofibril;0.000347577815524604!GO:0048468;cell development;0.000349582539338077!GO:0019843;rRNA binding;0.000405864125521847!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000451230641851696!GO:0005769;early endosome;0.0004643456484291!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000466768252963516!GO:0004812;aminoacyl-tRNA ligase activity;0.000466768252963516!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000466768252963516!GO:0005667;transcription factor complex;0.000485317059460957!GO:0043021;ribonucleoprotein binding;0.000491518694321559!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00050126163516132!GO:0000151;ubiquitin ligase complex;0.00050596619424625!GO:0004386;helicase activity;0.000526133893973179!GO:0043623;cellular protein complex assembly;0.000526837106276303!GO:0007005;mitochondrion organization and biogenesis;0.000543518949428361!GO:0050657;nucleic acid transport;0.000554022849116889!GO:0051236;establishment of RNA localization;0.000554022849116889!GO:0050658;RNA transport;0.000554022849116889!GO:0005741;mitochondrial outer membrane;0.000585181466922736!GO:0031968;organelle outer membrane;0.000655196240097225!GO:0065002;intracellular protein transport across a membrane;0.000688789927571724!GO:0043038;amino acid activation;0.000688789927571724!GO:0006418;tRNA aminoacylation for protein translation;0.000688789927571724!GO:0043039;tRNA aminoacylation;0.000688789927571724!GO:0051188;cofactor biosynthetic process;0.000717080161665678!GO:0006403;RNA localization;0.00072488304000774!GO:0008026;ATP-dependent helicase activity;0.000784336531417992!GO:0006974;response to DNA damage stimulus;0.000846797807704806!GO:0005762;mitochondrial large ribosomal subunit;0.000866242492320862!GO:0000315;organellar large ribosomal subunit;0.000866242492320862!GO:0009967;positive regulation of signal transduction;0.00089015917086817!GO:0001726;ruffle;0.000891835610200967!GO:0003724;RNA helicase activity;0.000916701292744787!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000938483899865299!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000941279979105719!GO:0019867;outer membrane;0.000972087131182457!GO:0030027;lamellipodium;0.000997843489819693!GO:0003702;RNA polymerase II transcription factor activity;0.00102683635790687!GO:0033673;negative regulation of kinase activity;0.00103151047022915!GO:0006469;negative regulation of protein kinase activity;0.00103151047022915!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00104046085866356!GO:0001666;response to hypoxia;0.0010413392637827!GO:0007517;muscle development;0.00108232694191664!GO:0031032;actomyosin structure organization and biogenesis;0.00112104336166406!GO:0046930;pore complex;0.00113379280538518!GO:0006334;nucleosome assembly;0.00114524157657589!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00115825650573578!GO:0022890;inorganic cation transmembrane transporter activity;0.00125987919267771!GO:0033116;ER-Golgi intermediate compartment membrane;0.00129732401870628!GO:0030118;clathrin coat;0.00133259050821761!GO:0005885;Arp2/3 protein complex;0.00133259050821761!GO:0016568;chromatin modification;0.00136710233334034!GO:0005083;small GTPase regulator activity;0.00159005917235176!GO:0065009;regulation of a molecular function;0.00159728332538283!GO:0006897;endocytosis;0.00161508441986305!GO:0010324;membrane invagination;0.00161508441986305!GO:0006695;cholesterol biosynthetic process;0.00164650026376279!GO:0030867;rough endoplasmic reticulum membrane;0.00171374019380841!GO:0008154;actin polymerization and/or depolymerization;0.00180003342501438!GO:0005905;coated pit;0.00189753524584338!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00191613240618239!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.00191613240618239!GO:0051920;peroxiredoxin activity;0.00191613240618239!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00194260972961516!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00194260972961516!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00194260972961516!GO:0031497;chromatin assembly;0.002065343788472!GO:0000139;Golgi membrane;0.00225767899642573!GO:0007266;Rho protein signal transduction;0.00226950677174167!GO:0051087;chaperone binding;0.00230936770014981!GO:0006693;prostaglandin metabolic process;0.00233281200680801!GO:0006692;prostanoid metabolic process;0.00233281200680801!GO:0030017;sarcomere;0.0024088270638648!GO:0006612;protein targeting to membrane;0.00253601200091031!GO:0051348;negative regulation of transferase activity;0.0025548424722355!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00258567698488489!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00288794753061294!GO:0045792;negative regulation of cell size;0.00290766258281393!GO:0009117;nucleotide metabolic process;0.00290766258281393!GO:0030308;negative regulation of cell growth;0.00322924980845732!GO:0050662;coenzyme binding;0.00332750280757786!GO:0008283;cell proliferation;0.00339784437679207!GO:0003690;double-stranded DNA binding;0.00361038301248357!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00361882054815656!GO:0033043;regulation of organelle organization and biogenesis;0.00361882054815656!GO:0008286;insulin receptor signaling pathway;0.00371603522006161!GO:0035258;steroid hormone receptor binding;0.00371603522006161!GO:0009108;coenzyme biosynthetic process;0.00373673232396109!GO:0005865;striated muscle thin filament;0.00417235201788567!GO:0051287;NAD binding;0.00417235201788567!GO:0040008;regulation of growth;0.00422997787510799!GO:0006892;post-Golgi vesicle-mediated transport;0.004238927888262!GO:0014706;striated muscle development;0.00439405113160227!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00460920050207483!GO:0031589;cell-substrate adhesion;0.00468911124537535!GO:0006752;group transfer coenzyme metabolic process;0.00471877856213033!GO:0008250;oligosaccharyl transferase complex;0.0047644912083806!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00493537701250357!GO:0000314;organellar small ribosomal subunit;0.00497068324909069!GO:0005763;mitochondrial small ribosomal subunit;0.00497068324909069!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00509619728894572!GO:0015002;heme-copper terminal oxidase activity;0.00509619728894572!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00509619728894572!GO:0004129;cytochrome-c oxidase activity;0.00509619728894572!GO:0030055;cell-matrix junction;0.00541056747080241!GO:0051028;mRNA transport;0.00557344710499527!GO:0043488;regulation of mRNA stability;0.00563288440024633!GO:0043487;regulation of RNA stability;0.00563288440024633!GO:0006364;rRNA processing;0.00567305126126901!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00569183022209833!GO:0005924;cell-substrate adherens junction;0.0057037986186629!GO:0016853;isomerase activity;0.0057037986186629!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00587970441200602!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00589652547326473!GO:0030041;actin filament polymerization;0.00607336850249279!GO:0009719;response to endogenous stimulus;0.00607338440557703!GO:0016072;rRNA metabolic process;0.00636886082299833!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00643486358374574!GO:0008610;lipid biosynthetic process;0.00643550316611087!GO:0030119;AP-type membrane coat adaptor complex;0.00647674647201829!GO:0030658;transport vesicle membrane;0.00652056443412538!GO:0006414;translational elongation;0.00654981492335296!GO:0017022;myosin binding;0.0065591413484141!GO:0001725;stress fiber;0.00662042376077088!GO:0032432;actin filament bundle;0.00662042376077088!GO:0008654;phospholipid biosynthetic process;0.0066281970754725!GO:0008186;RNA-dependent ATPase activity;0.00664087903072494!GO:0007160;cell-matrix adhesion;0.00664087903072494!GO:0016859;cis-trans isomerase activity;0.00664390503008864!GO:0005694;chromosome;0.00703538766943997!GO:0030031;cell projection biogenesis;0.00712163920251493!GO:0043065;positive regulation of apoptosis;0.00713158703766797!GO:0005048;signal sequence binding;0.00718551138145375!GO:0051252;regulation of RNA metabolic process;0.00735677071713878!GO:0005938;cell cortex;0.00805210534685508!GO:0030695;GTPase regulator activity;0.00805883646329125!GO:0008287;protein serine/threonine phosphatase complex;0.00805883646329125!GO:0051259;protein oligomerization;0.00814911012794985!GO:0051270;regulation of cell motility;0.00821384262378235!GO:0030674;protein binding, bridging;0.00834278173965044!GO:0008139;nuclear localization sequence binding;0.0084433971730185!GO:0006402;mRNA catabolic process;0.00847459382062542!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.00854802468480014!GO:0030131;clathrin adaptor complex;0.00858926513273737!GO:0045926;negative regulation of growth;0.00858926513273737!GO:0005813;centrosome;0.00875928443461713!GO:0006891;intra-Golgi vesicle-mediated transport;0.00915939310493646!GO:0030832;regulation of actin filament length;0.00939812906823894!GO:0045045;secretory pathway;0.00942998049362474!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00957386398791631!GO:0051101;regulation of DNA binding;0.00965485051148281!GO:0005862;muscle thin filament tropomyosin;0.00975393425321067!GO:0045445;myoblast differentiation;0.00977952119733234!GO:0048500;signal recognition particle;0.00987507577407004!GO:0043068;positive regulation of programmed cell death;0.00994419678199458!GO:0030132;clathrin coat of coated pit;0.0099648555020059!GO:0030518;steroid hormone receptor signaling pathway;0.0100666940212577!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0103011208886031!GO:0005869;dynactin complex;0.0104148680281466!GO:0017166;vinculin binding;0.0104427763499074!GO:0007050;cell cycle arrest;0.0106310087174123!GO:0004576;oligosaccharyl transferase activity;0.0107151446466147!GO:0051262;protein tetramerization;0.0109161332061651!GO:0030663;COPI coated vesicle membrane;0.0109737955082732!GO:0030126;COPI vesicle coat;0.0109737955082732!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0114059144380702!GO:0035035;histone acetyltransferase binding;0.0115131676286663!GO:0045454;cell redox homeostasis;0.0116372787546251!GO:0000278;mitotic cell cycle;0.0116656654990638!GO:0032535;regulation of cellular component size;0.0118014831423971!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0118092082581466!GO:0030127;COPII vesicle coat;0.0119533271581468!GO:0012507;ER to Golgi transport vesicle membrane;0.0119533271581468!GO:0006607;NLS-bearing substrate import into nucleus;0.0119926538900167!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.012241472736778!GO:0044427;chromosomal part;0.0126309202379526!GO:0031674;I band;0.0128666741868721!GO:0016584;nucleosome positioning;0.0131671412740081!GO:0043681;protein import into mitochondrion;0.0132595699236267!GO:0030134;ER to Golgi transport vesicle;0.0135076003115821!GO:0051168;nuclear export;0.0135701427609186!GO:0019904;protein domain specific binding;0.0139291239389249!GO:0005523;tropomyosin binding;0.0140323298801882!GO:0008047;enzyme activator activity;0.0143930119057268!GO:0000159;protein phosphatase type 2A complex;0.0149698676245777!GO:0043022;ribosome binding;0.0152175688313029!GO:0006633;fatty acid biosynthetic process;0.015328363011938!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0156140258036119!GO:0051235;maintenance of localization;0.0160022409810779!GO:0004004;ATP-dependent RNA helicase activity;0.0161357840772243!GO:0030521;androgen receptor signaling pathway;0.0164616920671838!GO:0001516;prostaglandin biosynthetic process;0.0166648410400587!GO:0046457;prostanoid biosynthetic process;0.0166648410400587!GO:0048487;beta-tubulin binding;0.0166818237138866!GO:0015630;microtubule cytoskeleton;0.0168504768987883!GO:0016787;hydrolase activity;0.0170083083994917!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0171738249170507!GO:0043034;costamere;0.0171738249170507!GO:0003729;mRNA binding;0.0173962956122163!GO:0045098;type III intermediate filament;0.0174535473201452!GO:0030100;regulation of endocytosis;0.0176934600369369!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0177895312820889!GO:0008601;protein phosphatase type 2A regulator activity;0.0181252037959684!GO:0030660;Golgi-associated vesicle membrane;0.0181337694252573!GO:0051146;striated muscle cell differentiation;0.0181536282518786!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.018954564165277!GO:0008629;induction of apoptosis by intracellular signals;0.0191123338038768!GO:0046822;regulation of nucleocytoplasmic transport;0.0195716717425258!GO:0031072;heat shock protein binding;0.0198703620970531!GO:0005925;focal adhesion;0.0202016158136842!GO:0051540;metal cluster binding;0.0202936321722241!GO:0051536;iron-sulfur cluster binding;0.0202936321722241!GO:0030137;COPI-coated vesicle;0.020492556930534!GO:0001944;vasculature development;0.020492556930534!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0206581535371153!GO:0006260;DNA replication;0.0206844835731533!GO:0006399;tRNA metabolic process;0.0212235874124623!GO:0001568;blood vessel development;0.0212629477202585!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0212629477202585!GO:0045047;protein targeting to ER;0.0212629477202585!GO:0007167;enzyme linked receptor protein signaling pathway;0.0213660828818039!GO:0003746;translation elongation factor activity;0.0213660828818039!GO:0031901;early endosome membrane;0.021433791064144!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0216607874426999!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.021747075819117!GO:0042692;muscle cell differentiation;0.021817030390192!GO:0015631;tubulin binding;0.0219639976292906!GO:0005815;microtubule organizing center;0.0225181368902926!GO:0031902;late endosome membrane;0.0225181368902926!GO:0048660;regulation of smooth muscle cell proliferation;0.0225181368902926!GO:0055001;muscle cell development;0.0225225630096201!GO:0030239;myofibril assembly;0.0225225630096201!GO:0055002;striated muscle cell development;0.0225225630096201!GO:0006118;electron transport;0.0230427713485272!GO:0040011;locomotion;0.0234483087345679!GO:0006281;DNA repair;0.0239665607495903!GO:0006650;glycerophospholipid metabolic process;0.0246818366587403!GO:0004860;protein kinase inhibitor activity;0.0248789350526323!GO:0045113;regulation of integrin biosynthetic process;0.0248789350526323!GO:0045112;integrin biosynthetic process;0.0248789350526323!GO:0040012;regulation of locomotion;0.0252214568710908!GO:0051098;regulation of binding;0.0252214568710908!GO:0042805;actinin binding;0.0252214568710908!GO:0016740;transferase activity;0.0257026192711608!GO:0051049;regulation of transport;0.0258795628966309!GO:0016408;C-acyltransferase activity;0.0258795628966309!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0268616507477151!GO:0030241;muscle thick filament assembly;0.0272204818811154!GO:0031034;myosin filament assembly;0.0272204818811154!GO:0031033;myosin filament assembly or disassembly;0.0272204818811154!GO:0048739;cardiac muscle fiber development;0.0272204818811154!GO:0030018;Z disc;0.0272270553587684!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0273382751787611!GO:0018196;peptidyl-asparagine modification;0.0275290153004617!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0275290153004617!GO:0045947;negative regulation of translational initiation;0.0278526322085272!GO:0000059;protein import into nucleus, docking;0.0279210063538153!GO:0009893;positive regulation of metabolic process;0.0282241660282275!GO:0060090;molecular adaptor activity;0.0282464709337578!GO:0016363;nuclear matrix;0.0283396516208026!GO:0008312;7S RNA binding;0.0284776600908653!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0284776600908653!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0284776600908653!GO:0050811;GABA receptor binding;0.0286811672758045!GO:0007169;transmembrane receptor protein tyrosine kinase signaling pathway;0.0298124220135545!GO:0016301;kinase activity;0.0311875860558944!GO:0031529;ruffle organization and biogenesis;0.031265259917941!GO:0007006;mitochondrial membrane organization and biogenesis;0.0314710706291405!GO:0051289;protein homotetramerization;0.0318798437367635!GO:0000902;cell morphogenesis;0.0322507232730378!GO:0032989;cellular structure morphogenesis;0.0322507232730378!GO:0031625;ubiquitin protein ligase binding;0.0326659441973178!GO:0022415;viral reproductive process;0.0333240859366532!GO:0043086;negative regulation of catalytic activity;0.0333240859366532!GO:0006081;aldehyde metabolic process;0.0334379118937808!GO:0032940;secretion by cell;0.0339502364497123!GO:0006417;regulation of translation;0.0341660043684642!GO:0016791;phosphoric monoester hydrolase activity;0.0346434599620559!GO:0046394;carboxylic acid biosynthetic process;0.0348971164794172!GO:0016053;organic acid biosynthetic process;0.0348971164794172!GO:0005096;GTPase activator activity;0.0354366934118253!GO:0050790;regulation of catalytic activity;0.0354468304667066!GO:0032594;protein transport within lipid bilayer;0.0358004281354533!GO:0032907;transforming growth factor-beta3 production;0.0358004281354533!GO:0032596;protein transport into lipid raft;0.0358004281354533!GO:0032910;regulation of transforming growth factor-beta3 production;0.0358004281354533!GO:0032595;B cell receptor transport within lipid bilayer;0.0358004281354533!GO:0033606;chemokine receptor transport within lipid bilayer;0.0358004281354533!GO:0032600;chemokine receptor transport out of lipid raft;0.0358004281354533!GO:0032599;protein transport out of lipid raft;0.0358004281354533!GO:0032597;B cell receptor transport into lipid raft;0.0358004281354533!GO:0032913;negative regulation of transforming growth factor-beta3 production;0.0358004281354533!GO:0043403;skeletal muscle regeneration;0.0358004281354533!GO:0048659;smooth muscle cell proliferation;0.036205548813655!GO:0006376;mRNA splice site selection;0.0364004303387593!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0364004303387593!GO:0006401;RNA catabolic process;0.0364695606852392!GO:0051338;regulation of transferase activity;0.0368180847172292!GO:0004722;protein serine/threonine phosphatase activity;0.0370527072472942!GO:0006917;induction of apoptosis;0.0373202946992567!GO:0008234;cysteine-type peptidase activity;0.0383322293953803!GO:0043284;biopolymer biosynthetic process;0.0395343667966143!GO:0005832;chaperonin-containing T-complex;0.039646988547555!GO:0030140;trans-Golgi network transport vesicle;0.0401617314803645!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0404197280746052!GO:0015399;primary active transmembrane transporter activity;0.0404197280746052!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0404325716744559!GO:0000786;nucleosome;0.0405072256587061!GO:0004177;aminopeptidase activity;0.0413484616073968!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0415754766916673!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0416367855867622!GO:0017091;AU-rich element binding;0.0420310297312107!GO:0050779;RNA destabilization;0.0420310297312107!GO:0000289;poly(A) tail shortening;0.0420310297312107!GO:0006509;membrane protein ectodomain proteolysis;0.0420310297312107!GO:0033619;membrane protein proteolysis;0.0420310297312107!GO:0019902;phosphatase binding;0.0423215131200373!GO:0050681;androgen receptor binding;0.0430478232906815!GO:0051674;localization of cell;0.0441487115136182!GO:0006928;cell motility;0.0441487115136182!GO:0018193;peptidyl-amino acid modification;0.0442680499830572!GO:0014866;skeletal myofibril assembly;0.0442680499830572!GO:0018149;peptide cross-linking;0.0444745755302884!GO:0004674;protein serine/threonine kinase activity;0.0450623116529002!GO:0008426;protein kinase C inhibitor activity;0.0451946567415848!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0458026775657447!GO:0030125;clathrin vesicle coat;0.0462751502142037!GO:0030665;clathrin coated vesicle membrane;0.0462751502142037!GO:0030522;intracellular receptor-mediated signaling pathway;0.0466258710411291!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.047477983107469!GO:0008147;structural constituent of bone;0.0480779211711955!GO:0051325;interphase;0.0481828198896057!GO:0030384;phosphoinositide metabolic process;0.0483303189838527!GO:0015992;proton transport;0.0484048687970534!GO:0015036;disulfide oxidoreductase activity;0.0486760638863103!GO:0005637;nuclear inner membrane;0.0497839320227551 | |||
|sample_id=10015 | |sample_id=10015 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=esophagus | |sample_tissue=esophagus | ||
|top_motifs=TFCP2:3.15625292998;TBP:3.11732400743;SRF:2.59651685561;TBX4,5:2.29084790886;HMX1:2.25847524919;TFAP2{A,C}:2.20667394969;TFAP4:2.08533872917;SNAI1..3:2.0296277751;MEF2{A,B,C,D}:1.92373628682;SP1:1.89358330215;ZNF423:1.8869834803;T:1.75998233179;HAND1,2:1.7535903803;MAZ:1.72431202286;ZEB1:1.68504714736;XCPE1{core}:1.62886922687;NR3C1:1.62381743898;RBPJ:1.58312877934;TLX2:1.5715071572;TLX1..3_NFIC{dimer}:1.52266702307;ZNF148:1.49951020083;GATA4:1.47711305749;NFATC1..3:1.47460073021;NR5A1,2:1.45436502661;MYFfamily:1.44823362282;MTF1:1.38920985578;NR1H4:1.38124837689;IKZF1:1.3727396171;GTF2A1,2:1.31963355237;MYOD1:1.30125374504;TP53:1.30032424604;FOXO1,3,4:1.28960680266;GCM1,2:1.26789776651;AR:1.26031100701;PAX1,9:1.25945994865;SMAD1..7,9:1.25349271669;KLF4:1.23110642377;FOXM1:1.22549346933;MYBL2:1.22137970214;PATZ1:1.16252040755;CDC5L:1.13462950734;HIC1:1.11228002807;ZNF238:1.10543572271;GTF2I:1.08423532448;LMO2:1.08237105046;POU5F1:1.08103144346;NKX2-3_NKX2-5:1.0489769719;NKX3-2:1.01419965335;IRF7:1.00733296642;PRDM1:0.957433923576;RXRA_VDR{dimer}:0.950938514823;SPZ1:0.950695306839;EBF1:0.925246749476;SOX5:0.907336677569;MED-1{core}:0.905430745619;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.901232011318;EP300:0.896764306658;FOX{D1,D2}:0.881399453265;NR6A1:0.86789612573;PAX5:0.863725636678;TEAD1:0.845930837444;TAL1_TCF{3,4,12}:0.844627324407;NANOG:0.831387216469;RREB1:0.82786857101;POU2F1..3:0.823047327256;HBP1_HMGB_SSRP1_UBTF:0.80349393122;MTE{core}:0.791425089881;HSF1,2:0.785746127024;NHLH1,2:0.773483937215;MZF1:0.770194597755;ESR1:0.755327856277;TGIF1:0.741569390033;ESRRA:0.677480855123;MAFB:0.622365255949;JUN:0.57666414011;EGR1..3:0.572354628614;STAT2,4,6:0.472253237137;PAX6:0.47022640987;GLI1..3:0.460024675147;FOXL1:0.447499409446;TFAP2B:0.441072616777;NFIX:0.433421413216;GFI1B:0.426523416217;TEF:0.405845710174;FOXN1:0.395539221458;UFEwm:0.35963887471;ALX4:0.343738992801;FOXQ1:0.332410533447;ATF2:0.31308726552;REST:0.302127393396;SOX2:0.296576002413;ETS1,2:0.280907532819;SPIB:0.264306145982;ZFP161:0.256160408442;ZIC1..3:0.241599213535;FOX{I1,J2}:0.240637463357;CDX1,2,4:0.220937359748;IRF1,2:0.199974310126;NFE2L1:0.170015953494;NKX2-2,8:0.147128307422;POU3F1..4:0.136686944479;ZBTB6:0.13637090957;STAT1,3:0.133003047934;NKX2-1,4:0.13096006176;ZNF384:0.127450369065;HOX{A4,D4}:0.116258604464;BPTF:0.11181246777;FOSL2:0.0420119883899;PAX3,7:-0.0315668319032;FOS_FOS{B,L1}_JUN{B,D}:-0.0333377803154;VSX1,2:-0.0390158281792;FOX{F1,F2,J1}:-0.0518876419684;PITX1..3:-0.0582241426359;ELF1,2,4:-0.0882682184564;SPI1:-0.0895952487828;NFIL3:-0.0963274180396;HES1:-0.116793028279;IKZF2:-0.117580291515;RXR{A,B,G}:-0.163305247669;GZF1:-0.180631277628;PBX1:-0.181369789146;HNF4A_NR2F1,2:-0.200175769852;CEBPA,B_DDIT3:-0.203736968198;ADNP_IRX_SIX_ZHX:-0.214418795183;PPARG:-0.217147989112;SREBF1,2:-0.225384702885;bHLH_family:-0.238092994383;BREu{core}:-0.242028157471;ATF6:-0.243400243049;NFE2:-0.267974448752;ATF4:-0.290805559438;GATA6:-0.299663212049;ZNF143:-0.300282224831;HNF1A:-0.307075108976;GFI1:-0.328317269113;RFX2..5_RFXANK_RFXAP:-0.341282308638;NFY{A,B,C}:-0.347788492939;SOX{8,9,10}:-0.365209010414;CUX2:-0.370647671068;POU6F1:-0.390023365806;BACH2:-0.426519735096;ARID5B:-0.42840216744;ONECUT1,2:-0.432359434877;SOX17:-0.436871275224;HLF:-0.45110731551;NFKB1_REL_RELA:-0.461805746601;E2F1..5:-0.490085319832;POU1F1:-0.491793971056;CRX:-0.495106796162;NKX6-1,2:-0.503733844159;DMAP1_NCOR{1,2}_SMARC:-0.531502301916;LHX3,4:-0.553765011358;NFE2L2:-0.579262238964;RUNX1..3:-0.581556660136;RORA:-0.582600350982;PAX2:-0.58272573496;XBP1:-0.645616605807;ALX1:-0.652884535183;LEF1_TCF7_TCF7L1,2:-0.66405779145;PDX1:-0.687735263757;TFDP1:-0.721568616266;FOXA2:-0.737868639677;DBP:-0.752840467767;ATF5_CREB3:-0.761045348301;CREB1:-0.787439409325;AHR_ARNT_ARNT2:-0.80664734157;FOXP1:-0.809110751238;EVI1:-0.826394136906;YY1:-0.845002496215;NRF1:-0.873068879405;PRRX1,2:-0.884758030531;AIRE:-0.898045139823;NANOG{mouse}:-0.921428654247;RFX1:-0.958352233217;HOX{A5,B5}:-0.971483343734;OCT4_SOX2{dimer}:-1.00600508248;HIF1A:-1.03038813818;ZBTB16:-1.10944622325;TOPORS:-1.12363484321;PAX4:-1.1275771808;FOXP3:-1.20198861841;MYB:-1.3078460454;HOX{A6,A7,B6,B7}:-1.34312736198;STAT5{A,B}:-1.36265207119;NKX3-1:-1.39234409628;ELK1,4_GABP{A,B1}:-1.44211977311;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.47086533318;HOXA9_MEIS1:-1.47111948516;FOXD3:-1.55092457469;HMGA1,2:-1.73688381651;EN1,2:-1.79216903994;PAX8:-2.25056562128 | |top_motifs=TFCP2:3.15625292998;TBP:3.11732400743;SRF:2.59651685561;TBX4,5:2.29084790886;HMX1:2.25847524919;TFAP2{A,C}:2.20667394969;TFAP4:2.08533872917;SNAI1..3:2.0296277751;MEF2{A,B,C,D}:1.92373628682;SP1:1.89358330215;ZNF423:1.8869834803;T:1.75998233179;HAND1,2:1.7535903803;MAZ:1.72431202286;ZEB1:1.68504714736;XCPE1{core}:1.62886922687;NR3C1:1.62381743898;RBPJ:1.58312877934;TLX2:1.5715071572;TLX1..3_NFIC{dimer}:1.52266702307;ZNF148:1.49951020083;GATA4:1.47711305749;NFATC1..3:1.47460073021;NR5A1,2:1.45436502661;MYFfamily:1.44823362282;MTF1:1.38920985578;NR1H4:1.38124837689;IKZF1:1.3727396171;GTF2A1,2:1.31963355237;MYOD1:1.30125374504;TP53:1.30032424604;FOXO1,3,4:1.28960680266;GCM1,2:1.26789776651;AR:1.26031100701;PAX1,9:1.25945994865;SMAD1..7,9:1.25349271669;KLF4:1.23110642377;FOXM1:1.22549346933;MYBL2:1.22137970214;PATZ1:1.16252040755;CDC5L:1.13462950734;HIC1:1.11228002807;ZNF238:1.10543572271;GTF2I:1.08423532448;LMO2:1.08237105046;POU5F1:1.08103144346;NKX2-3_NKX2-5:1.0489769719;NKX3-2:1.01419965335;IRF7:1.00733296642;PRDM1:0.957433923576;RXRA_VDR{dimer}:0.950938514823;SPZ1:0.950695306839;EBF1:0.925246749476;SOX5:0.907336677569;MED-1{core}:0.905430745619;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.901232011318;EP300:0.896764306658;FOX{D1,D2}:0.881399453265;NR6A1:0.86789612573;PAX5:0.863725636678;TEAD1:0.845930837444;TAL1_TCF{3,4,12}:0.844627324407;NANOG:0.831387216469;RREB1:0.82786857101;POU2F1..3:0.823047327256;HBP1_HMGB_SSRP1_UBTF:0.80349393122;MTE{core}:0.791425089881;HSF1,2:0.785746127024;NHLH1,2:0.773483937215;MZF1:0.770194597755;ESR1:0.755327856277;TGIF1:0.741569390033;ESRRA:0.677480855123;MAFB:0.622365255949;JUN:0.57666414011;EGR1..3:0.572354628614;STAT2,4,6:0.472253237137;PAX6:0.47022640987;GLI1..3:0.460024675147;FOXL1:0.447499409446;TFAP2B:0.441072616777;NFIX:0.433421413216;GFI1B:0.426523416217;TEF:0.405845710174;FOXN1:0.395539221458;UFEwm:0.35963887471;ALX4:0.343738992801;FOXQ1:0.332410533447;ATF2:0.31308726552;REST:0.302127393396;SOX2:0.296576002413;ETS1,2:0.280907532819;SPIB:0.264306145982;ZFP161:0.256160408442;ZIC1..3:0.241599213535;FOX{I1,J2}:0.240637463357;CDX1,2,4:0.220937359748;IRF1,2:0.199974310126;NFE2L1:0.170015953494;NKX2-2,8:0.147128307422;POU3F1..4:0.136686944479;ZBTB6:0.13637090957;STAT1,3:0.133003047934;NKX2-1,4:0.13096006176;ZNF384:0.127450369065;HOX{A4,D4}:0.116258604464;BPTF:0.11181246777;FOSL2:0.0420119883899;PAX3,7:-0.0315668319032;FOS_FOS{B,L1}_JUN{B,D}:-0.0333377803154;VSX1,2:-0.0390158281792;FOX{F1,F2,J1}:-0.0518876419684;PITX1..3:-0.0582241426359;ELF1,2,4:-0.0882682184564;SPI1:-0.0895952487828;NFIL3:-0.0963274180396;HES1:-0.116793028279;IKZF2:-0.117580291515;RXR{A,B,G}:-0.163305247669;GZF1:-0.180631277628;PBX1:-0.181369789146;HNF4A_NR2F1,2:-0.200175769852;CEBPA,B_DDIT3:-0.203736968198;ADNP_IRX_SIX_ZHX:-0.214418795183;PPARG:-0.217147989112;SREBF1,2:-0.225384702885;bHLH_family:-0.238092994383;BREu{core}:-0.242028157471;ATF6:-0.243400243049;NFE2:-0.267974448752;ATF4:-0.290805559438;GATA6:-0.299663212049;ZNF143:-0.300282224831;HNF1A:-0.307075108976;GFI1:-0.328317269113;RFX2..5_RFXANK_RFXAP:-0.341282308638;NFY{A,B,C}:-0.347788492939;SOX{8,9,10}:-0.365209010414;CUX2:-0.370647671068;POU6F1:-0.390023365806;BACH2:-0.426519735096;ARID5B:-0.42840216744;ONECUT1,2:-0.432359434877;SOX17:-0.436871275224;HLF:-0.45110731551;NFKB1_REL_RELA:-0.461805746601;E2F1..5:-0.490085319832;POU1F1:-0.491793971056;CRX:-0.495106796162;NKX6-1,2:-0.503733844159;DMAP1_NCOR{1,2}_SMARC:-0.531502301916;LHX3,4:-0.553765011358;NFE2L2:-0.579262238964;RUNX1..3:-0.581556660136;RORA:-0.582600350982;PAX2:-0.58272573496;XBP1:-0.645616605807;ALX1:-0.652884535183;LEF1_TCF7_TCF7L1,2:-0.66405779145;PDX1:-0.687735263757;TFDP1:-0.721568616266;FOXA2:-0.737868639677;DBP:-0.752840467767;ATF5_CREB3:-0.761045348301;CREB1:-0.787439409325;AHR_ARNT_ARNT2:-0.80664734157;FOXP1:-0.809110751238;EVI1:-0.826394136906;YY1:-0.845002496215;NRF1:-0.873068879405;PRRX1,2:-0.884758030531;AIRE:-0.898045139823;NANOG{mouse}:-0.921428654247;RFX1:-0.958352233217;HOX{A5,B5}:-0.971483343734;OCT4_SOX2{dimer}:-1.00600508248;HIF1A:-1.03038813818;ZBTB16:-1.10944622325;TOPORS:-1.12363484321;PAX4:-1.1275771808;FOXP3:-1.20198861841;MYB:-1.3078460454;HOX{A6,A7,B6,B7}:-1.34312736198;STAT5{A,B}:-1.36265207119;NKX3-1:-1.39234409628;ELK1,4_GABP{A,B1}:-1.44211977311;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.47086533318;HOXA9_MEIS1:-1.47111948516;FOXD3:-1.55092457469;HMGA1,2:-1.73688381651;EN1,2:-1.79216903994;PAX8:-2.25056562128 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10015-101C6;search_select_hide=table117:FF:10015-101C6 | |||
}} | }} | ||
Latest revision as of 12:14, 3 June 2020
| Name: | esophagus, adult, pool1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10620 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10620
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10620
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.29 |
| 10 | 10 | 0.0393 |
| 100 | 100 | 0.103 |
| 101 | 101 | 0.534 |
| 102 | 102 | 0.912 |
| 103 | 103 | 0.879 |
| 104 | 104 | 0.879 |
| 105 | 105 | 0.342 |
| 106 | 106 | 0.22 |
| 107 | 107 | 0.0221 |
| 108 | 108 | 0.535 |
| 109 | 109 | 0.554 |
| 11 | 11 | 0.503 |
| 110 | 110 | 0.554 |
| 111 | 111 | 0.153 |
| 112 | 112 | 0.222 |
| 113 | 113 | 0.757 |
| 114 | 114 | 0.166 |
| 115 | 115 | 0.147 |
| 116 | 116 | 0.627 |
| 117 | 117 | 0.0431 |
| 118 | 118 | 0.0364 |
| 119 | 119 | 0.853 |
| 12 | 12 | 0.505 |
| 120 | 120 | 0.506 |
| 121 | 121 | 0.641 |
| 122 | 122 | 0.398 |
| 123 | 123 | 4.00589e-4 |
| 124 | 124 | 0.676 |
| 125 | 125 | 0.671 |
| 126 | 126 | 0.339 |
| 127 | 127 | 0.825 |
| 128 | 128 | 0.187 |
| 129 | 129 | 0.756 |
| 13 | 13 | 0.226 |
| 130 | 130 | 0.818 |
| 131 | 131 | 0.329 |
| 132 | 132 | 0.0324 |
| 133 | 133 | 0.296 |
| 134 | 134 | 0.00388 |
| 135 | 135 | 0.0192 |
| 136 | 136 | 0.931 |
| 137 | 137 | 0.457 |
| 138 | 138 | 0.982 |
| 139 | 139 | 0.446 |
| 14 | 14 | 0.933 |
| 140 | 140 | 0.202 |
| 141 | 141 | 0.896 |
| 142 | 142 | 0.531 |
| 143 | 143 | 0.0177 |
| 144 | 144 | 0.263 |
| 145 | 145 | 0.458 |
| 146 | 146 | 0.13 |
| 147 | 147 | 0.294 |
| 148 | 148 | 0.729 |
| 149 | 149 | 0.00683 |
| 15 | 15 | 0.101 |
| 150 | 150 | 0.89 |
| 151 | 151 | 0.777 |
| 152 | 152 | 0.0741 |
| 153 | 153 | 0.461 |
| 154 | 154 | 0.618 |
| 155 | 155 | 0.672 |
| 156 | 156 | 0.592 |
| 157 | 157 | 0.896 |
| 158 | 158 | 0.102 |
| 159 | 159 | 0.978 |
| 16 | 16 | 0.718 |
| 160 | 160 | 0.651 |
| 161 | 161 | 0.588 |
| 162 | 162 | 0.335 |
| 163 | 163 | 0.602 |
| 164 | 164 | 0.0308 |
| 165 | 165 | 0.252 |
| 166 | 166 | 0.473 |
| 167 | 167 | 0.0354 |
| 168 | 168 | 0.404 |
| 169 | 169 | 0.0843 |
| 17 | 17 | 0.6 |
| 18 | 18 | 0.147 |
| 19 | 19 | 0.3 |
| 2 | 2 | 0.00513 |
| 20 | 20 | 0.0518 |
| 21 | 21 | 0.665 |
| 22 | 22 | 0.184 |
| 23 | 23 | 0.245 |
| 24 | 24 | 0.78 |
| 25 | 25 | 0.945 |
| 26 | 26 | 0.396 |
| 27 | 27 | 0.499 |
| 28 | 28 | 0.717 |
| 29 | 29 | 0.0466 |
| 3 | 3 | 0.395 |
| 30 | 30 | 0.00343 |
| 31 | 31 | 0.871 |
| 32 | 32 | 0.787 |
| 33 | 33 | 0.472 |
| 34 | 34 | 0.468 |
| 35 | 35 | 0.224 |
| 36 | 36 | 0.0197 |
| 37 | 37 | 0.696 |
| 38 | 38 | 0.895 |
| 39 | 39 | 0.173 |
| 4 | 4 | 0.156 |
| 40 | 40 | 0.255 |
| 41 | 41 | 0.216 |
| 42 | 42 | 0.402 |
| 43 | 43 | 0.726 |
| 44 | 44 | 0.362 |
| 45 | 45 | 0.0332 |
| 46 | 46 | 0.701 |
| 47 | 47 | 0.404 |
| 48 | 48 | 0.576 |
| 49 | 49 | 0.342 |
| 5 | 5 | 0.519 |
| 50 | 50 | 0.422 |
| 51 | 51 | 0.844 |
| 52 | 52 | 0.0705 |
| 53 | 53 | 0.904 |
| 54 | 54 | 0.859 |
| 55 | 55 | 0.566 |
| 56 | 56 | 0.987 |
| 57 | 57 | 0.19 |
| 58 | 58 | 0.973 |
| 59 | 59 | 0.246 |
| 6 | 6 | 0.502 |
| 60 | 60 | 0.25 |
| 61 | 61 | 0.702 |
| 62 | 62 | 0.922 |
| 63 | 63 | 0.574 |
| 64 | 64 | 0.526 |
| 65 | 65 | 0.557 |
| 66 | 66 | 0.0325 |
| 67 | 67 | 0.437 |
| 68 | 68 | 0.77 |
| 69 | 69 | 0.265 |
| 7 | 7 | 0.902 |
| 70 | 70 | 0.491 |
| 71 | 71 | 0.163 |
| 72 | 72 | 0.289 |
| 73 | 73 | 0.998 |
| 74 | 74 | 0.146 |
| 75 | 75 | 0.124 |
| 76 | 76 | 0.0093 |
| 77 | 77 | 0.0457 |
| 78 | 78 | 0.831 |
| 79 | 79 | 0.834 |
| 8 | 8 | 0.783 |
| 80 | 80 | 0.251 |
| 81 | 81 | 0.494 |
| 82 | 82 | 0.908 |
| 83 | 83 | 0.26 |
| 84 | 84 | 0.87 |
| 85 | 85 | 0.309 |
| 86 | 86 | 0.882 |
| 87 | 87 | 0.727 |
| 88 | 88 | 0.648 |
| 89 | 89 | 0.0749 |
| 9 | 9 | 0.353 |
| 90 | 90 | 0.0236 |
| 91 | 91 | 0.0337 |
| 92 | 92 | 0.555 |
| 93 | 93 | 0.0765 |
| 94 | 94 | 0.0894 |
| 95 | 95 | 0.215 |
| 96 | 96 | 0.872 |
| 97 | 97 | 0.932 |
| 98 | 98 | 0.269 |
| 99 | 99 | 0.113 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10620
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0001043 (esophagus)
0002100 (trunk)
0000479 (tissue)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000466 (immaterial anatomical entity)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0005177 (trunk region element)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001041 (foregut)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010015 (human esophagus - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0009143 (esophageal region)
UBERON:0010316 (germ layer / neural crest)
