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(Created page with "{{f5samples |id=FF:10207-103F9 |name=heart - tricuspid valve, adult, biol_rep1 |sample_id=10207 |rna_tube_id=103F9 |rna_box=103 |rna_position=F9 |sample_cell_lot=NA |s...")
 
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{{f5samples
{{f5samples
|id=FF:10207-103F9
|DRA_sample_Accession=CAGE@SAMD00005003
|name=heart - tricuspid valve, adult, biol_rep1
|accession_numbers=CAGE;DRX008662;DRR009534;DRZ000959;DRZ002344;DRZ012309;DRZ013694
|sample_id=10207
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0007100,UBERON:0000948,UBERON:0002134,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0010313,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0003978,UBERON:0002081,UBERON:0004151,UBERON:0000946,UBERON:0002133,UBERON:0005208,UBERON:0010317,UBERON:0004145,UBERON:0005946,UBERON:0004535,UBERON:0005965,UBERON:0001009,UBERON:0002078
|rna_tube_id=103F9
|rna_box=103
|rna_position=F9
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Biochain
|rna_lot_number=
|rna_catalog_number=R1234136-10
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=
|sample_donor(cell lot)=
|sample_sex=77.00000
|sample_age=M
|sample_ethnicity=
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=10.00000
|rna_concentration=
|sample_note=
|profile_hcage=CNhs12857,LSID973,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000055,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000926,UBERON:0000946,UBERON:0000948,UBERON:0001009,UBERON:0001048,UBERON:0001050,UBERON:0001062,UBERON:0001981,UBERON:0002049,UBERON:0002050,UBERON:0002062,UBERON:0002078,UBERON:0002081,UBERON:0002133,UBERON:0002134,UBERON:0002165,UBERON:0002342,UBERON:0002346,UBERON:0002523,UBERON:0002532,UBERON:0003075,UBERON:0003081,UBERON:0003084,UBERON:0003914,UBERON:0003978,UBERON:0004111,UBERON:0004120,UBERON:0004121,UBERON:0004140,UBERON:0004141,UBERON:0004145,UBERON:0004151,UBERON:0004291,UBERON:0004535,UBERON:0004537,UBERON:0004872,UBERON:0004923,UBERON:0005208,UBERON:0005291,UBERON:0005423,UBERON:0005498,UBERON:0005946,UBERON:0005965,UBERON:0005983,UBERON:0006598,UBERON:0006965,UBERON:0007005,UBERON:0007023,UBERON:0007100,UBERON:0007284,UBERON:0007500,UBERON:0007798
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010207
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000946;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000948;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001981;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002081;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002342;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004145;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004151;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005157;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007100;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007798
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0006603,UBERON:0003104,UBERON:0005062,UBERON:0007284,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/heart%2520-%2520tricuspid%2520valve%252c%2520adult.CNhs12857.10207-103F9.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/heart%2520-%2520tricuspid%2520valve%252c%2520adult.CNhs12857.10207-103F9.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/heart%2520-%2520tricuspid%2520valve%252c%2520adult.CNhs12857.10207-103F9.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/heart%2520-%2520tricuspid%2520valve%252c%2520adult.CNhs12857.10207-103F9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/heart%2520-%2520tricuspid%2520valve%252c%2520adult.CNhs12857.10207-103F9.hg38.nobarcode.ctss.bed.gz
|id=FF:10207-103F9
|is_a=EFO:0002091;;FF:0010207
|is_obsolete=
|library_id=CNhs12857
|library_id_phase_based=2:CNhs12857
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10207
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10207
|name=heart - tricuspid valve, adult
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs12857,LSID973,release012,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=103
|rna_catalog_number=R1234136-10
|rna_concentration=0.86
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=
|rna_od260/280=
|rna_position=F9
|rna_rin=
|rna_sample_type=
|rna_tube_id=103F9
|rna_weight_ug=10
|sample_age=77
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=
|sample_company=Biochain
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.93232624300495e-223!GO:0005737;cytoplasm;6.77404705353418e-162!GO:0043226;organelle;1.31003775444431e-140!GO:0043229;intracellular organelle;3.67082493488559e-140!GO:0043227;membrane-bound organelle;1.08147716159237e-124!GO:0043231;intracellular membrane-bound organelle;1.08147716159237e-124!GO:0005515;protein binding;5.28468159353737e-110!GO:0044444;cytoplasmic part;1.13756649498727e-101!GO:0044422;organelle part;3.57426255327522e-85!GO:0044446;intracellular organelle part;7.61377913876988e-84!GO:0032991;macromolecular complex;4.7814970676197e-69!GO:0003723;RNA binding;1.91293108416681e-58!GO:0044238;primary metabolic process;1.99111361058415e-56!GO:0043170;macromolecule metabolic process;2.31512354606157e-56!GO:0030529;ribonucleoprotein complex;6.31439547632865e-55!GO:0044237;cellular metabolic process;3.92928994985122e-54!GO:0043233;organelle lumen;2.55561560791953e-52!GO:0031974;membrane-enclosed lumen;2.55561560791953e-52!GO:0005634;nucleus;3.04398404220907e-50!GO:0044428;nuclear part;3.69924574964793e-50!GO:0016043;cellular component organization and biogenesis;6.19241375827875e-46!GO:0019538;protein metabolic process;1.08182742974908e-42!GO:0044260;cellular macromolecule metabolic process;3.12025471565449e-37!GO:0044267;cellular protein metabolic process;2.48165144103199e-36!GO:0043234;protein complex;4.80182008967885e-36!GO:0005739;mitochondrion;1.07465993319671e-35!GO:0006396;RNA processing;7.37811851034526e-35!GO:0033036;macromolecule localization;1.28559251832432e-34!GO:0031090;organelle membrane;1.44968975475392e-34!GO:0015031;protein transport;3.36659757353534e-33!GO:0031981;nuclear lumen;3.54584288667933e-33!GO:0006412;translation;3.10086937322993e-32!GO:0043283;biopolymer metabolic process;1.65712079096522e-31!GO:0008104;protein localization;2.63794094777706e-31!GO:0045184;establishment of protein localization;2.77098800770414e-31!GO:0010467;gene expression;2.9439371301227e-31!GO:0046907;intracellular transport;8.09123184300041e-31!GO:0016071;mRNA metabolic process;1.35076415224697e-30!GO:0005829;cytosol;1.44494862069831e-30!GO:0005840;ribosome;3.27584931455354e-30!GO:0031967;organelle envelope;7.7682648212067e-29!GO:0031975;envelope;1.30727781604555e-28!GO:0008380;RNA splicing;1.6821262002541e-27!GO:0044429;mitochondrial part;7.11507337895081e-27!GO:0006886;intracellular protein transport;8.15160779114726e-26!GO:0003735;structural constituent of ribosome;1.36560212634571e-25!GO:0000166;nucleotide binding;1.60297589830022e-24!GO:0006397;mRNA processing;1.65782177600809e-24!GO:0033279;ribosomal subunit;8.06863870180818e-24!GO:0009059;macromolecule biosynthetic process;3.48560771476218e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.20044604011316e-22!GO:0044249;cellular biosynthetic process;5.90555642098436e-22!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.2842786574589e-21!GO:0043228;non-membrane-bound organelle;1.87720868299101e-21!GO:0043232;intracellular non-membrane-bound organelle;1.87720868299101e-21!GO:0065003;macromolecular complex assembly;4.10086181961716e-21!GO:0009058;biosynthetic process;1.22070315707251e-20!GO:0022607;cellular component assembly;1.2963335698586e-20!GO:0051649;establishment of cellular localization;3.01453725864267e-20!GO:0005654;nucleoplasm;3.64179950133076e-20!GO:0051641;cellular localization;5.56878885654603e-20!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.7728568128107e-20!GO:0008134;transcription factor binding;1.15094134932819e-19!GO:0005740;mitochondrial envelope;1.19987609118422e-19!GO:0031966;mitochondrial membrane;5.15020998387343e-19!GO:0005681;spliceosome;2.66895089189863e-18!GO:0044445;cytosolic part;4.0752969568702e-18!GO:0006996;organelle organization and biogenesis;4.42288756965408e-18!GO:0048523;negative regulation of cellular process;6.47280570272681e-18!GO:0044451;nucleoplasm part;1.58050593531114e-17!GO:0019866;organelle inner membrane;1.9884365550479e-17!GO:0050789;regulation of biological process;2.33419340517288e-17!GO:0032553;ribonucleotide binding;9.21279947242504e-17!GO:0032555;purine ribonucleotide binding;9.21279947242504e-17!GO:0017076;purine nucleotide binding;1.12179401365242e-16!GO:0048519;negative regulation of biological process;2.55594476345122e-16!GO:0017111;nucleoside-triphosphatase activity;2.84406965435744e-16!GO:0016462;pyrophosphatase activity;3.00865233770017e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.18847247798061e-16!GO:0005743;mitochondrial inner membrane;3.94074618075145e-16!GO:0050794;regulation of cellular process;5.40293172120321e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;5.63417857724122e-16!GO:0008092;cytoskeletal protein binding;5.93105161533053e-16!GO:0006119;oxidative phosphorylation;8.99940791827895e-16!GO:0016070;RNA metabolic process;1.00767234896048e-15!GO:0005730;nucleolus;1.33304880006366e-15!GO:0005794;Golgi apparatus;1.92816433939171e-15!GO:0006457;protein folding;2.60738293566354e-15!GO:0006605;protein targeting;3.13536035812946e-15!GO:0012505;endomembrane system;4.12567835321224e-15!GO:0048770;pigment granule;1.43921662850334e-14!GO:0042470;melanosome;1.43921662850334e-14!GO:0022618;protein-RNA complex assembly;1.62854765263308e-14!GO:0043412;biopolymer modification;2.37098104785511e-14!GO:0016192;vesicle-mediated transport;2.50097451211006e-14!GO:0065007;biological regulation;6.14227367648661e-14!GO:0003676;nucleic acid binding;6.7195655144844e-14!GO:0019941;modification-dependent protein catabolic process;8.92561792775141e-14!GO:0043632;modification-dependent macromolecule catabolic process;8.92561792775141e-14!GO:0006511;ubiquitin-dependent protein catabolic process;9.01417428770753e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.06242341775217e-13!GO:0044265;cellular macromolecule catabolic process;1.14337921908729e-13!GO:0012501;programmed cell death;1.16156258562669e-13!GO:0005783;endoplasmic reticulum;1.30091422597667e-13!GO:0006512;ubiquitin cycle;1.560125015266e-13!GO:0044455;mitochondrial membrane part;1.78115195092012e-13!GO:0016874;ligase activity;1.98049383048567e-13!GO:0006366;transcription from RNA polymerase II promoter;2.34521363104022e-13!GO:0006915;apoptosis;2.5804375879383e-13!GO:0044257;cellular protein catabolic process;2.93262785549416e-13!GO:0005746;mitochondrial respiratory chain;3.17887930864864e-13!GO:0015935;small ribosomal subunit;3.44263700869253e-13!GO:0030029;actin filament-based process;5.48990433235296e-13!GO:0043687;post-translational protein modification;5.55408589310617e-13!GO:0006464;protein modification process;7.08618250284559e-13!GO:0006913;nucleocytoplasmic transport;9.73198012977195e-13!GO:0003712;transcription cofactor activity;1.03812778613898e-12!GO:0008219;cell death;1.06726370247352e-12!GO:0016265;death;1.06726370247352e-12!GO:0008135;translation factor activity, nucleic acid binding;1.07326912603908e-12!GO:0032559;adenyl ribonucleotide binding;1.17240641125431e-12!GO:0030554;adenyl nucleotide binding;1.80806328623609e-12!GO:0005524;ATP binding;2.13758395209382e-12!GO:0051169;nuclear transport;2.30743468691568e-12!GO:0051082;unfolded protein binding;2.99073838464687e-12!GO:0030036;actin cytoskeleton organization and biogenesis;4.24215487106976e-12!GO:0043285;biopolymer catabolic process;5.06321880215434e-12!GO:0016564;transcription repressor activity;7.69848014830749e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.02390502627586e-11!GO:0003954;NADH dehydrogenase activity;1.02390502627586e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.02390502627586e-11!GO:0015934;large ribosomal subunit;1.04203696641742e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.46190090505363e-11!GO:0048193;Golgi vesicle transport;3.98215044960821e-11!GO:0003779;actin binding;6.03427768626275e-11!GO:0006793;phosphorus metabolic process;6.45119104056786e-11!GO:0006796;phosphate metabolic process;6.45119104056786e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.17808850456166e-10!GO:0016604;nuclear body;1.43432230015256e-10!GO:0030163;protein catabolic process;2.40084503169668e-10!GO:0009057;macromolecule catabolic process;3.0094298934197e-10!GO:0006413;translational initiation;3.18163468072952e-10!GO:0006461;protein complex assembly;4.31478286657737e-10!GO:0017038;protein import;4.71655823747381e-10!GO:0005635;nuclear envelope;5.16827700260465e-10!GO:0031965;nuclear membrane;7.00092022987542e-10!GO:0000502;proteasome complex (sensu Eukaryota);7.11500850954967e-10!GO:0044432;endoplasmic reticulum part;7.90494106959758e-10!GO:0003743;translation initiation factor activity;8.58110160363993e-10!GO:0031980;mitochondrial lumen;8.80284811558243e-10!GO:0005759;mitochondrial matrix;8.80284811558243e-10!GO:0030964;NADH dehydrogenase complex (quinone);8.92354879334217e-10!GO:0045271;respiratory chain complex I;8.92354879334217e-10!GO:0005747;mitochondrial respiratory chain complex I;8.92354879334217e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.0393533829544e-09!GO:0042775;organelle ATP synthesis coupled electron transport;1.15287407710779e-09!GO:0042773;ATP synthesis coupled electron transport;1.15287407710779e-09!GO:0031324;negative regulation of cellular metabolic process;1.16020673751071e-09!GO:0006446;regulation of translational initiation;1.16020673751071e-09!GO:0008565;protein transporter activity;1.56529755569393e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.32708814683881e-09!GO:0016310;phosphorylation;2.51024971041936e-09!GO:0009892;negative regulation of metabolic process;3.57763086117736e-09!GO:0008639;small protein conjugating enzyme activity;3.84196005759375e-09!GO:0008361;regulation of cell size;4.29079808166092e-09!GO:0016887;ATPase activity;4.9732196662047e-09!GO:0004842;ubiquitin-protein ligase activity;4.98130833807879e-09!GO:0016607;nuclear speck;5.07830970231534e-09!GO:0015629;actin cytoskeleton;5.30879490837752e-09!GO:0005793;ER-Golgi intermediate compartment;5.64136153520763e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.39959918393181e-09!GO:0003714;transcription corepressor activity;6.62048493846454e-09!GO:0016049;cell growth;7.52774618327424e-09!GO:0006606;protein import into nucleus;1.0462274877944e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;1.10394143326895e-08!GO:0000375;RNA splicing, via transesterification reactions;1.10394143326895e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.10394143326895e-08!GO:0019899;enzyme binding;1.16144383936366e-08!GO:0051246;regulation of protein metabolic process;1.1984742006006e-08!GO:0051170;nuclear import;1.20646029744872e-08!GO:0042254;ribosome biogenesis and assembly;1.59785369724734e-08!GO:0005788;endoplasmic reticulum lumen;1.62735520482043e-08!GO:0016481;negative regulation of transcription;1.8982565570948e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.53501276703481e-08!GO:0044248;cellular catabolic process;3.37086628981781e-08!GO:0007264;small GTPase mediated signal transduction;3.84382191244044e-08!GO:0019787;small conjugating protein ligase activity;4.84137100542361e-08!GO:0042623;ATPase activity, coupled;7.27578209074193e-08!GO:0031252;leading edge;9.07712254466222e-08!GO:0006950;response to stress;1.07284933683834e-07!GO:0042981;regulation of apoptosis;1.15777600742269e-07!GO:0001558;regulation of cell growth;1.19908092771269e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.22791058050937e-07!GO:0044453;nuclear membrane part;1.22946466075877e-07!GO:0043067;regulation of programmed cell death;1.26276015453441e-07!GO:0003924;GTPase activity;2.15606993464521e-07!GO:0051789;response to protein stimulus;3.16202853514947e-07!GO:0006986;response to unfolded protein;3.16202853514947e-07!GO:0004386;helicase activity;3.70665536937821e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.50236935976867e-07!GO:0007243;protein kinase cascade;4.65019158394213e-07!GO:0043069;negative regulation of programmed cell death;5.21488386639634e-07!GO:0007010;cytoskeleton organization and biogenesis;5.43825423198028e-07!GO:0031988;membrane-bound vesicle;5.51437475477512e-07!GO:0005768;endosome;6.9037086404124e-07!GO:0051186;cofactor metabolic process;6.93737807716217e-07!GO:0043066;negative regulation of apoptosis;6.93737807716217e-07!GO:0031982;vesicle;6.98894127612524e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.47291602073145e-07!GO:0005761;mitochondrial ribosome;7.70630265631515e-07!GO:0000313;organellar ribosome;7.70630265631515e-07!GO:0009055;electron carrier activity;7.73670854263924e-07!GO:0005643;nuclear pore;7.99803902816154e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.07027887364027e-07!GO:0009966;regulation of signal transduction;9.22469397196299e-07!GO:0016023;cytoplasmic membrane-bound vesicle;9.61444614030678e-07!GO:0008026;ATP-dependent helicase activity;9.75578173842157e-07!GO:0016044;membrane organization and biogenesis;1.11479573944186e-06!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.23101061678727e-06!GO:0001944;vasculature development;1.38873678808191e-06!GO:0048522;positive regulation of cellular process;1.44970588967248e-06!GO:0031410;cytoplasmic vesicle;1.53723861447281e-06!GO:0007265;Ras protein signal transduction;1.54729091139306e-06!GO:0045786;negative regulation of progression through cell cycle;1.61915377943881e-06!GO:0006403;RNA localization;2.03443402489002e-06!GO:0001568;blood vessel development;2.36827194391889e-06!GO:0016881;acid-amino acid ligase activity;2.37281680121981e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.38531892583252e-06!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.50111512555758e-06!GO:0050657;nucleic acid transport;2.84755003794251e-06!GO:0051236;establishment of RNA localization;2.84755003794251e-06!GO:0050658;RNA transport;2.84755003794251e-06!GO:0045892;negative regulation of transcription, DNA-dependent;2.90261397273713e-06!GO:0006916;anti-apoptosis;3.24040666107965e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.36457003383029e-06!GO:0040008;regulation of growth;3.47967776235147e-06!GO:0005525;GTP binding;3.8581521077904e-06!GO:0007242;intracellular signaling cascade;4.1818611102179e-06!GO:0005667;transcription factor complex;4.59753816006967e-06!GO:0044431;Golgi apparatus part;5.63040243641827e-06!GO:0046930;pore complex;5.81131313570593e-06!GO:0048518;positive regulation of biological process;7.45522443604382e-06!GO:0019222;regulation of metabolic process;8.22196899322857e-06!GO:0006259;DNA metabolic process;8.39352464220891e-06!GO:0045333;cellular respiration;9.12430179615314e-06!GO:0016563;transcription activator activity;9.72029008243318e-06!GO:0005083;small GTPase regulator activity;1.08009789217309e-05!GO:0009060;aerobic respiration;1.22099907348522e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.24842800434406e-05!GO:0006364;rRNA processing;1.37224210630808e-05!GO:0015986;ATP synthesis coupled proton transport;1.38317766128106e-05!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.38317766128106e-05!GO:0006163;purine nucleotide metabolic process;1.56757212544044e-05!GO:0051128;regulation of cellular component organization and biogenesis;1.57355133836881e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.73400475670165e-05!GO:0019829;cation-transporting ATPase activity;1.86604391228095e-05!GO:0003713;transcription coactivator activity;1.95413143053147e-05!GO:0005789;endoplasmic reticulum membrane;2.06030940042304e-05!GO:0065002;intracellular protein transport across a membrane;2.21381056006793e-05!GO:0006732;coenzyme metabolic process;2.28938161079127e-05!GO:0030532;small nuclear ribonucleoprotein complex;2.37199160137761e-05!GO:0008286;insulin receptor signaling pathway;2.43490256876499e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.57081605531194e-05!GO:0004812;aminoacyl-tRNA ligase activity;2.57081605531194e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.57081605531194e-05!GO:0016072;rRNA metabolic process;2.61939648189247e-05!GO:0030695;GTPase regulator activity;2.69881019213477e-05!GO:0009259;ribonucleotide metabolic process;2.82544190385855e-05!GO:0032561;guanyl ribonucleotide binding;2.91128760746186e-05!GO:0019001;guanyl nucleotide binding;2.91128760746186e-05!GO:0045259;proton-transporting ATP synthase complex;3.01225091989061e-05!GO:0009150;purine ribonucleotide metabolic process;3.73176218203645e-05!GO:0007517;muscle development;4.46883357725173e-05!GO:0007266;Rho protein signal transduction;4.50290175453864e-05!GO:0043566;structure-specific DNA binding;5.69245563566961e-05!GO:0006888;ER to Golgi vesicle-mediated transport;5.89972146647736e-05!GO:0048475;coated membrane;5.95910832484177e-05!GO:0030117;membrane coat;5.95910832484177e-05!GO:0043038;amino acid activation;5.95910832484177e-05!GO:0006418;tRNA aminoacylation for protein translation;5.95910832484177e-05!GO:0043039;tRNA aminoacylation;5.95910832484177e-05!GO:0003724;RNA helicase activity;6.01121533184983e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.07255175408964e-05!GO:0051028;mRNA transport;6.2801832706785e-05!GO:0046034;ATP metabolic process;7.12627503535004e-05!GO:0032446;protein modification by small protein conjugation;7.30209519415272e-05!GO:0030027;lamellipodium;7.49598926886321e-05!GO:0016567;protein ubiquitination;8.42716358117801e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.15012612155177e-05!GO:0009199;ribonucleoside triphosphate metabolic process;9.15012612155177e-05!GO:0030120;vesicle coat;9.16508547236379e-05!GO:0030662;coated vesicle membrane;9.16508547236379e-05!GO:0006164;purine nucleotide biosynthetic process;9.52005033827071e-05!GO:0016197;endosome transport;9.61973937244982e-05!GO:0006399;tRNA metabolic process;0.000107302615785583!GO:0009141;nucleoside triphosphate metabolic process;0.000123409540571295!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000123409540571295!GO:0009205;purine ribonucleoside triphosphate metabolic process;0.000126901639470101!GO:0009144;purine nucleoside triphosphate metabolic process;0.000126901639470101!GO:0000139;Golgi membrane;0.000130653061128465!GO:0001525;angiogenesis;0.00013368314778608!GO:0015980;energy derivation by oxidation of organic compounds;0.000138634568245187!GO:0048514;blood vessel morphogenesis;0.000149483328400939!GO:0016568;chromatin modification;0.000150004818382612!GO:0044440;endosomal part;0.000158876157930875!GO:0010008;endosome membrane;0.000158876157930875!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000162468634749191!GO:0006091;generation of precursor metabolites and energy;0.000164400635338598!GO:0045893;positive regulation of transcription, DNA-dependent;0.000165305465552788!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000165735853268796!GO:0006754;ATP biosynthetic process;0.000172580993631954!GO:0006753;nucleoside phosphate metabolic process;0.000172580993631954!GO:0005741;mitochondrial outer membrane;0.000174598473989681!GO:0000245;spliceosome assembly;0.000175529858155591!GO:0009056;catabolic process;0.000176612074712655!GO:0000151;ubiquitin ligase complex;0.000183341007514775!GO:0006402;mRNA catabolic process;0.000213129486636962!GO:0006099;tricarboxylic acid cycle;0.00021727367563095!GO:0046356;acetyl-CoA catabolic process;0.00021727367563095!GO:0001726;ruffle;0.000217463690231511!GO:0006897;endocytosis;0.00021905333210041!GO:0010324;membrane invagination;0.00021905333210041!GO:0009152;purine ribonucleotide biosynthetic process;0.000221479074064439!GO:0005791;rough endoplasmic reticulum;0.000221479074064439!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000230192759894899!GO:0016469;proton-transporting two-sector ATPase complex;0.00023104414419351!GO:0001666;response to hypoxia;0.000231733061129983!GO:0051726;regulation of cell cycle;0.000234373247081052!GO:0000074;regulation of progression through cell cycle;0.000234435891436847!GO:0009142;nucleoside triphosphate biosynthetic process;0.000253608635016818!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000253608635016818!GO:0042802;identical protein binding;0.000270712495154823!GO:0005769;early endosome;0.000310887517966577!GO:0051188;cofactor biosynthetic process;0.000311612762980538!GO:0009260;ribonucleotide biosynthetic process;0.000340799789674143!GO:0048471;perinuclear region of cytoplasm;0.000345981075472299!GO:0006084;acetyl-CoA metabolic process;0.000352569163201993!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000353579833578314!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000353579833578314!GO:0019867;outer membrane;0.00035376966384835!GO:0003697;single-stranded DNA binding;0.00035569539152795!GO:0006613;cotranslational protein targeting to membrane;0.000389024977813316!GO:0005048;signal sequence binding;0.000403149248627935!GO:0030867;rough endoplasmic reticulum membrane;0.00040450064181552!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000405203753668112!GO:0031968;organelle outer membrane;0.000408018954033238!GO:0048468;cell development;0.000431764531691641!GO:0045941;positive regulation of transcription;0.000438585023668623!GO:0005856;cytoskeleton;0.000499440850071842!GO:0008047;enzyme activator activity;0.000516081747587771!GO:0005839;proteasome core complex (sensu Eukaryota);0.000627075045655694!GO:0007049;cell cycle;0.000628524463121601!GO:0051427;hormone receptor binding;0.000646109711945469!GO:0030016;myofibril;0.000651554685350682!GO:0005798;Golgi-associated vesicle;0.000743563580531293!GO:0005912;adherens junction;0.000773011257924091!GO:0051187;cofactor catabolic process;0.000793679818591021!GO:0043292;contractile fiber;0.000806078350591643!GO:0051270;regulation of cell motility;0.000830122728879839!GO:0044449;contractile fiber part;0.00088331352298805!GO:0043623;cellular protein complex assembly;0.000886400060090863!GO:0005770;late endosome;0.000952787993686463!GO:0009109;coenzyme catabolic process;0.000988686007888899!GO:0008307;structural constituent of muscle;0.00100663514902828!GO:0005096;GTPase activator activity;0.00101965259941549!GO:0009108;coenzyme biosynthetic process;0.00103470840908932!GO:0016740;transferase activity;0.00103470840908932!GO:0019843;rRNA binding;0.00105755108273729!GO:0003702;RNA polymerase II transcription factor activity;0.00115453750504677!GO:0003729;mRNA binding;0.0011763860506534!GO:0035257;nuclear hormone receptor binding;0.00122351024899171!GO:0031072;heat shock protein binding;0.0012778079252483!GO:0051168;nuclear export;0.00140419872086137!GO:0008154;actin polymerization and/or depolymerization;0.00144760200057914!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0014732673142061!GO:0006607;NLS-bearing substrate import into nucleus;0.00149050088819242!GO:0009117;nucleotide metabolic process;0.00149386889614898!GO:0007005;mitochondrion organization and biogenesis;0.00151881060739975!GO:0016301;kinase activity;0.0015215668997055!GO:0009967;positive regulation of signal transduction;0.00155317955020766!GO:0030041;actin filament polymerization;0.00160502898785627!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00168470435523068!GO:0033673;negative regulation of kinase activity;0.00176434329341126!GO:0006469;negative regulation of protein kinase activity;0.00176434329341126!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00185818823930286!GO:0031323;regulation of cellular metabolic process;0.00186234338124355!GO:0004298;threonine endopeptidase activity;0.00193449688192837!GO:0045792;negative regulation of cell size;0.00196593512001681!GO:0008139;nuclear localization sequence binding;0.00203169751151978!GO:0006892;post-Golgi vesicle-mediated transport;0.00209471332824071!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00214387486545693!GO:0006414;translational elongation;0.00215600838684486!GO:0030133;transport vesicle;0.00219939867641801!GO:0030308;negative regulation of cell growth;0.00228183451582144!GO:0065009;regulation of a molecular function;0.00230624381223065!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00237642617152512!GO:0008186;RNA-dependent ATPase activity;0.00237963714699465!GO:0035258;steroid hormone receptor binding;0.00248678051968907!GO:0051087;chaperone binding;0.00248678051968907!GO:0040011;locomotion;0.00250202720389425!GO:0030218;erythrocyte differentiation;0.00254462231262982!GO:0043021;ribonucleoprotein binding;0.00262211613188324!GO:0000902;cell morphogenesis;0.0026278077456618!GO:0032989;cellular structure morphogenesis;0.0026278077456618!GO:0060047;heart contraction;0.00266265586106207!GO:0003015;heart process;0.00266265586106207!GO:0005885;Arp2/3 protein complex;0.00268326187542136!GO:0004674;protein serine/threonine kinase activity;0.00270115807651853!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00270167711914895!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00270167711914895!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00270167711914895!GO:0016779;nucleotidyltransferase activity;0.00270988596681178!GO:0022890;inorganic cation transmembrane transporter activity;0.00273602500481507!GO:0006401;RNA catabolic process;0.00275512224342862!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00282650494207706!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00282650494207706!GO:0033043;regulation of organelle organization and biogenesis;0.00282650494207706!GO:0044452;nucleolar part;0.00285462250696661!GO:0019838;growth factor binding;0.00287624416598783!GO:0040012;regulation of locomotion;0.00287955202591365!GO:0000059;protein import into nucleus, docking;0.0030210253722058!GO:0016859;cis-trans isomerase activity;0.00304059447876552!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00311566512113765!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00318870565425435!GO:0015002;heme-copper terminal oxidase activity;0.00318870565425435!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00318870565425435!GO:0004129;cytochrome-c oxidase activity;0.00318870565425435!GO:0007050;cell cycle arrest;0.00335017155879568!GO:0005865;striated muscle thin filament;0.00335665053406979!GO:0005813;centrosome;0.00352355477475255!GO:0030017;sarcomere;0.00395308501536712!GO:0016853;isomerase activity;0.00418507480429021!GO:0048646;anatomical structure formation;0.00420163438624614!GO:0019902;phosphatase binding;0.00429735813654383!GO:0051056;regulation of small GTPase mediated signal transduction;0.0044105691925479!GO:0003690;double-stranded DNA binding;0.00467426089601902!GO:0051348;negative regulation of transferase activity;0.00484777289620565!GO:0051252;regulation of RNA metabolic process;0.00503504503266863!GO:0005100;Rho GTPase activator activity;0.00527444890558651!GO:0006323;DNA packaging;0.00529898000355903!GO:0008250;oligosaccharyl transferase complex;0.00530022801029984!GO:0030880;RNA polymerase complex;0.00551543380779372!GO:0005905;coated pit;0.00554391659805749!GO:0045454;cell redox homeostasis;0.00563447061570108!GO:0043488;regulation of mRNA stability;0.0059600195614673!GO:0043487;regulation of RNA stability;0.0059600195614673!GO:0008287;protein serine/threonine phosphatase complex;0.00598180623232548!GO:0006612;protein targeting to membrane;0.00598180623232548!GO:0051920;peroxiredoxin activity;0.00614504527979263!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00618625213737652!GO:0001725;stress fiber;0.00619073030338401!GO:0032432;actin filament bundle;0.00619073030338401!GO:0004004;ATP-dependent RNA helicase activity;0.00621626176642132!GO:0004576;oligosaccharyl transferase activity;0.00621626176642132!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00673335711054494!GO:0015399;primary active transmembrane transporter activity;0.00673335711054494!GO:0048659;smooth muscle cell proliferation;0.00681110344182441!GO:0017166;vinculin binding;0.00682791202815378!GO:0030518;steroid hormone receptor signaling pathway;0.00686680172614053!GO:0046983;protein dimerization activity;0.00693876292243411!GO:0031589;cell-substrate adhesion;0.00696470161145619!GO:0006350;transcription;0.00702391091135925!GO:0006752;group transfer coenzyme metabolic process;0.00703675251359441!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00716639612011732!GO:0030118;clathrin coat;0.00745248828288267!GO:0006468;protein amino acid phosphorylation;0.00805514934866916!GO:0045926;negative regulation of growth;0.00807982191677168!GO:0005773;vacuole;0.00809707689565266!GO:0005762;mitochondrial large ribosomal subunit;0.0082790802014483!GO:0000315;organellar large ribosomal subunit;0.0082790802014483!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00843434402537135!GO:0001516;prostaglandin biosynthetic process;0.00846842313373876!GO:0046457;prostanoid biosynthetic process;0.00846842313373876!GO:0031901;early endosome membrane;0.00860487737997474!GO:0006974;response to DNA damage stimulus;0.00862994373954092!GO:0045045;secretory pathway;0.00921223347134017!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00933190347156779!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00933190347156779!GO:0046578;regulation of Ras protein signal transduction;0.00957262606990801!GO:0006383;transcription from RNA polymerase III promoter;0.00964769336417818!GO:0033116;ER-Golgi intermediate compartment membrane;0.00975628033885003!GO:0014706;striated muscle development;0.00978479396277403!GO:0003899;DNA-directed RNA polymerase activity;0.00982958752891498!GO:0030521;androgen receptor signaling pathway;0.00987189238100453!GO:0050811;GABA receptor binding;0.0101468612075382!GO:0003746;translation elongation factor activity;0.0101900886563458!GO:0009893;positive regulation of metabolic process;0.0103268982972004!GO:0035023;regulation of Rho protein signal transduction;0.0105493175038844!GO:0051101;regulation of DNA binding;0.0108497214613887!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0113030198760185!GO:0000428;DNA-directed RNA polymerase complex;0.0113030198760185!GO:0043492;ATPase activity, coupled to movement of substances;0.0118189289496377!GO:0019904;protein domain specific binding;0.0120229238123052!GO:0032535;regulation of cellular component size;0.0121588755089314!GO:0008383;manganese superoxide dismutase activity;0.0121796190235104!GO:0001315;age-dependent response to reactive oxygen species;0.0121796190235104!GO:0043681;protein import into mitochondrion;0.0122962592380541!GO:0008016;regulation of heart contraction;0.0123708027410051!GO:0005815;microtubule organizing center;0.0125253886375102!GO:0008654;phospholipid biosynthetic process;0.0126873504075123!GO:0022415;viral reproductive process;0.0126873504075123!GO:0009719;response to endogenous stimulus;0.0127063184291008!GO:0030659;cytoplasmic vesicle membrane;0.0127540674690469!GO:0004721;phosphoprotein phosphatase activity;0.01295180653391!GO:0030832;regulation of actin filament length;0.013531691496368!GO:0012506;vesicle membrane;0.0135539612816793!GO:0043407;negative regulation of MAP kinase activity;0.0135539612816793!GO:0006979;response to oxidative stress;0.0137894033626547!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0140975070911736!GO:0007167;enzyme linked receptor protein signaling pathway;0.0141139829734565!GO:0005099;Ras GTPase activator activity;0.0141804136673366!GO:0051098;regulation of binding;0.0143397801631123!GO:0015630;microtubule cytoskeleton;0.0143397801631123!GO:0030134;ER to Golgi transport vesicle;0.0143397801631123!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.014391108071019!GO:0000314;organellar small ribosomal subunit;0.0146791089641663!GO:0005763;mitochondrial small ribosomal subunit;0.0146791089641663!GO:0010468;regulation of gene expression;0.0147914826227108!GO:0030833;regulation of actin filament polymerization;0.0147914826227108!GO:0032780;negative regulation of ATPase activity;0.0148575406493959!GO:0030132;clathrin coat of coated pit;0.0148661103528966!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0153441613907311!GO:0008283;cell proliferation;0.0155472205026811!GO:0030127;COPII vesicle coat;0.015580612929871!GO:0012507;ER to Golgi transport vesicle membrane;0.015580612929871!GO:0005862;muscle thin filament tropomyosin;0.0156658162764898!GO:0009165;nucleotide biosynthetic process;0.0159189077328102!GO:0016311;dephosphorylation;0.0160877010893056!GO:0016791;phosphoric monoester hydrolase activity;0.0162563631029649!GO:0048487;beta-tubulin binding;0.0162860485189211!GO:0007160;cell-matrix adhesion;0.0164773108898781!GO:0030334;regulation of cell migration;0.0165319736278959!GO:0009266;response to temperature stimulus;0.0165868456092016!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0168756333648472!GO:0016787;hydrolase activity;0.0184238389258256!GO:0048660;regulation of smooth muscle cell proliferation;0.0187494564844892!GO:0006891;intra-Golgi vesicle-mediated transport;0.0190611121618343!GO:0048500;signal recognition particle;0.0196861174691037!GO:0019903;protein phosphatase binding;0.0196861174691037!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.019928454486308!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.019928454486308!GO:0042805;actinin binding;0.0199498405995935!GO:0045098;type III intermediate filament;0.0202337762394568!GO:0044433;cytoplasmic vesicle part;0.0206482386484301!GO:0051540;metal cluster binding;0.0206482386484301!GO:0051536;iron-sulfur cluster binding;0.0206482386484301!GO:0030658;transport vesicle membrane;0.0209879930230122!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0210017844808995!GO:0030099;myeloid cell differentiation;0.0210017844808995!GO:0046822;regulation of nucleocytoplasmic transport;0.0214556160893935!GO:0030055;cell-matrix junction;0.021483172448211!GO:0006693;prostaglandin metabolic process;0.0216455093413563!GO:0006692;prostanoid metabolic process;0.0216455093413563!GO:0005581;collagen;0.0217960715727823!GO:0022402;cell cycle process;0.0219458790297897!GO:0043284;biopolymer biosynthetic process;0.0221354517979771!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0221721227326616!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0221721227326616!GO:0030119;AP-type membrane coat adaptor complex;0.0222346478288916!GO:0042026;protein refolding;0.0225169427325403!GO:0017022;myosin binding;0.0226868102370519!GO:0030522;intracellular receptor-mediated signaling pathway;0.0231592607029305!GO:0048644;muscle morphogenesis;0.023270398064268!GO:0055008;cardiac muscle morphogensis;0.023270398064268!GO:0004722;protein serine/threonine phosphatase activity;0.023270398064268!GO:0045637;regulation of myeloid cell differentiation;0.023270398064268!GO:0032940;secretion by cell;0.023270398064268!GO:0006611;protein export from nucleus;0.023270398064268!GO:0030155;regulation of cell adhesion;0.0233294635840539!GO:0051539;4 iron, 4 sulfur cluster binding;0.0235116768408654!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0242931728646185!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0246244323948847!GO:0050681;androgen receptor binding;0.0247766349659547!GO:0000060;protein import into nucleus, translocation;0.024830648485398!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0249146799069895!GO:0000323;lytic vacuole;0.0252713597940592!GO:0005764;lysosome;0.0252713597940592!GO:0007015;actin filament organization;0.0252713597940592!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.025350303206047!GO:0006595;polyamine metabolic process;0.025849680924931!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0258624019600742!GO:0051248;negative regulation of protein metabolic process;0.0260192684207002!GO:0009615;response to virus;0.0260270134232198!GO:0031674;I band;0.0262996010043692!GO:0005085;guanyl-nucleotide exchange factor activity;0.0266594998254678!GO:0006417;regulation of translation;0.0269337742313507!GO:0006352;transcription initiation;0.0270629763547054!GO:0018196;peptidyl-asparagine modification;0.0270629763547054!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0270629763547054!GO:0005924;cell-substrate adherens junction;0.0270629763547054!GO:0031625;ubiquitin protein ligase binding;0.0277779998559796!GO:0007006;mitochondrial membrane organization and biogenesis;0.0277893666326926!GO:0005913;cell-cell adherens junction;0.0280680302191566!GO:0004672;protein kinase activity;0.0280752908729223!GO:0006260;DNA replication;0.0283999997028749!GO:0030172;troponin C binding;0.0296067845042354!GO:0044262;cellular carbohydrate metabolic process;0.0303346711669928!GO:0043065;positive regulation of apoptosis;0.0308313462757224!GO:0030131;clathrin adaptor complex;0.0312197839307933!GO:0045947;negative regulation of translational initiation;0.0312197839307933!GO:0043353;enucleate erythrocyte differentiation;0.0316195961431456!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0327373278748381!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0327373278748381!GO:0006405;RNA export from nucleus;0.0330985464347461!GO:0043068;positive regulation of programmed cell death;0.0337172464822015!GO:0030865;cortical cytoskeleton organization and biogenesis;0.034188999777072!GO:0051059;NF-kappaB binding;0.034530478534917!GO:0007004;telomere maintenance via telomerase;0.0351237588534539!GO:0000287;magnesium ion binding;0.03515622435974!GO:0016491;oxidoreductase activity;0.0356281360076179!GO:0007162;negative regulation of cell adhesion;0.0357268885176711!GO:0006984;ER-nuclear signaling pathway;0.0359494977294083!GO:0005637;nuclear inner membrane;0.0359494977294083!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0359620633342397!GO:0035035;histone acetyltransferase binding;0.0360080740222802!GO:0017048;Rho GTPase binding;0.0368517795402317!GO:0003817;complement factor D activity;0.0370787104542761!GO:0004111;creatine kinase activity;0.0375958923015671!GO:0022603;regulation of anatomical structure morphogenesis;0.0378836782984827!GO:0008360;regulation of cell shape;0.0378836782984827!GO:0022604;regulation of cell morphogenesis;0.0378836782984827!GO:0051329;interphase of mitotic cell cycle;0.0381099786472744!GO:0030192;Hsp70/Hsc70 protein regulator activity;0.0382143682953725!GO:0030911;TPR domain binding;0.0383149649031461!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0399510806376802!GO:0050790;regulation of catalytic activity;0.0404654291009001!GO:0000339;RNA cap binding;0.0408572615723563!GO:0008234;cysteine-type peptidase activity;0.0417987823124352!GO:0005669;transcription factor TFIID complex;0.0419183262081295!GO:0030031;cell projection biogenesis;0.0419324004350997!GO:0000049;tRNA binding;0.0421939212914065!GO:0006351;transcription, DNA-dependent;0.0422791599679891!GO:0032774;RNA biosynthetic process;0.0422791599679891!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0425247148425855!GO:0045047;protein targeting to ER;0.0425247148425855!GO:0009112;nucleobase metabolic process;0.0425550815531319!GO:0005832;chaperonin-containing T-complex;0.0438348070501205!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.0443587470435706!GO:0019783;small conjugating protein-specific protease activity;0.0461259469106406!GO:0008312;7S RNA binding;0.0468532485862293!GO:0043086;negative regulation of catalytic activity;0.0472483246790971!GO:0004860;protein kinase inhibitor activity;0.0478344764054299!GO:0004843;ubiquitin-specific protease activity;0.0482034668464159!GO:0007507;heart development;0.0482460607845217!GO:0018193;peptidyl-amino acid modification;0.0484570499904827!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0484570499904827!GO:0031272;regulation of pseudopodium formation;0.0484570499904827!GO:0031269;pseudopodium formation;0.0484570499904827!GO:0031344;regulation of cell projection organization and biogenesis;0.0484570499904827!GO:0031268;pseudopodium organization and biogenesis;0.0484570499904827!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0484570499904827!GO:0031274;positive regulation of pseudopodium formation;0.0484570499904827!GO:0030660;Golgi-associated vesicle membrane;0.0485732925561693!GO:0005159;insulin-like growth factor receptor binding;0.0486146642945691!GO:0000159;protein phosphatase type 2A complex;0.0494785714770681!GO:0030032;lamellipodium biogenesis;0.0495204334032602
|sample_id=10207
|sample_note=
|sample_sex=M
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
|top_motifs=FOXP1:3.43064010307;FOXL1:3.04754859681;MEF2{A,B,C,D}:2.85607025581;BPTF:2.81994335688;AR:2.4935221358;STAT2,4,6:2.4098432849;ZBTB16:2.25928065342;NFATC1..3:2.00308248881;HBP1_HMGB_SSRP1_UBTF:1.97499441928;IKZF1:1.86829731063;SRF:1.75691625214;HSF1,2:1.68299909204;RBPJ:1.58640827378;EGR1..3:1.55345359046;MED-1{core}:1.54749120933;SOX5:1.43146818249;IKZF2:1.37814032634;MAZ:1.3611887823;TBP:1.35182988494;PATZ1:1.32052045467;EVI1:1.2330214813;PAX6:1.21483965475;TFAP2B:1.19538456012;MAFB:1.15658116466;EP300:1.15240387305;NR1H4:1.12801216718;FOXO1,3,4:1.10283342641;RXR{A,B,G}:1.09934904472;TGIF1:1.09086855356;TEAD1:1.08361456834;NKX2-1,4:1.081961956;MYBL2:1.07522031157;ZNF238:1.0718146417;TLX2:1.03460031528;HOX{A4,D4}:1.02988199628;MZF1:1.02698138335;ESRRA:1.0009985267;TBX4,5:0.996486879849;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.993233153204;GATA4:0.98493096602;ALX1:0.974209786966;HIC1:0.958897532428;GATA6:0.953233594468;ATF2:0.945456387186;ATF6:0.94518769095;HOX{A6,A7,B6,B7}:0.939168965466;PITX1..3:0.935106343858;RXRA_VDR{dimer}:0.898270147814;ZFP161:0.892902864149;TLX1..3_NFIC{dimer}:0.879074039459;PRDM1:0.853823693262;IRF7:0.846884569364;HES1:0.813839569892;GTF2A1,2:0.804440270207;MTF1:0.798585166787;GTF2I:0.795753686838;MTE{core}:0.769634883045;FOXD3:0.768092915214;HMGA1,2:0.742317825414;TFAP2{A,C}:0.741301067002;FOX{D1,D2}:0.73181716782;PAX1,9:0.720335798834;ATF4:0.689114816666;SPZ1:0.683675952099;GCM1,2:0.656977940815;TFAP4:0.614568948704;CUX2:0.612540603177;NR3C1:0.609769695377;GZF1:0.601838233083;SMAD1..7,9:0.578042858089;POU6F1:0.565320555932;GFI1B:0.560864428809;CDC5L:0.541493946376;NKX3-1:0.517005440887;CREB1:0.459747755734;MYFfamily:0.455006609872;DBP:0.427438540987;TFCP2:0.425787786043;CDX1,2,4:0.420484438104;ATF5_CREB3:0.388933817948;TEF:0.377531776497;XBP1:0.375008166665;IRF1,2:0.372513824117;BREu{core}:0.332208036318;FOX{I1,J2}:0.293606704137;XCPE1{core}:0.293301241573;RORA:0.293061481868;RREB1:0.287589235589;ETS1,2:0.277336735149;STAT1,3:0.261227275686;HAND1,2:0.254353980643;SP1:0.25411125215;PAX3,7:0.252083401372;STAT5{A,B}:0.181481480448;PAX4:0.175593825575;ZIC1..3:0.172709071004;NFIX:0.166658604677;NANOG:0.162885111325;FOXN1:0.151240914445;CEBPA,B_DDIT3:0.149749113273;JUN:0.143599572876;FOSL2:0.120850158771;NFE2L1:0.115872234707;FOXP3:0.0989549422055;NFKB1_REL_RELA:0.0818546115379;POU1F1:0.0810499598551;NR5A1,2:0.0796818520824;SOX{8,9,10}:0.0736101338649;NHLH1,2:0.0728597759711;NKX3-2:0.0723241211233;GLI1..3:0.0627227919859;ZNF384:0.0341819224069;TP53:0.0215647081377;SPI1:0.0134906421439;REST:-0.00872212260584;HOXA9_MEIS1:-0.0192469785765;FOXM1:-0.0275848686102;bHLH_family:-0.0622243609335;ELF1,2,4:-0.0639942066103;HNF1A:-0.0836390028016;NKX6-1,2:-0.0932617285761;SPIB:-0.123882803031;AIRE:-0.136629407161;TFDP1:-0.15633935493;TOPORS:-0.160136192314;EN1,2:-0.174982099951;AHR_ARNT_ARNT2:-0.17583728088;ADNP_IRX_SIX_ZHX:-0.176353003371;UFEwm:-0.192809479014;KLF4:-0.220688691968;PAX5:-0.23992153432;HMX1:-0.261827882096;NKX2-2,8:-0.276269815472;FOXA2:-0.277591693932;ARID5B:-0.277616769847;MYOD1:-0.297258775015;PDX1:-0.302519382743;ZNF423:-0.314643559817;SOX17:-0.323559189309;HLF:-0.353674544396;PBX1:-0.356483837434;LHX3,4:-0.369909299754;LEF1_TCF7_TCF7L1,2:-0.394630104869;NFE2:-0.402114900158;HOX{A5,B5}:-0.403740880448;LMO2:-0.415983986323;ESR1:-0.432808863752;NFIL3:-0.436286501566;PRRX1,2:-0.44597401389;HNF4A_NR2F1,2:-0.459905654727;DMAP1_NCOR{1,2}_SMARC:-0.475022207255;ZNF143:-0.480241861208;POU3F1..4:-0.484934547336;FOS_FOS{B,L1}_JUN{B,D}:-0.487479839058;HIF1A:-0.497413116797;FOXQ1:-0.512417387163;ALX4:-0.59468995526;BACH2:-0.601561687526;EBF1:-0.605459233268;ONECUT1,2:-0.627744414027;T:-0.680941849633;SOX2:-0.704355810228;NRF1:-0.817881901508;FOX{F1,F2,J1}:-0.823793774856;RFX2..5_RFXANK_RFXAP:-0.836295351274;PAX2:-0.844525892644;RFX1:-0.869786770222;NFE2L2:-0.881109429262;NR6A1:-0.914152229114;SNAI1..3:-0.931787254052;E2F1..5:-0.942084236687;SREBF1,2:-0.952644806795;ZNF148:-0.956491920531;CRX:-0.975802363688;NKX2-3_NKX2-5:-1.02230827725;RUNX1..3:-1.02257150505;ZEB1:-1.05407505446;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.08844652194;GFI1:-1.13417844518;PPARG:-1.16697731585;ZBTB6:-1.17791131301;MYB:-1.23014794784;POU5F1:-1.28254055039;VSX1,2:-1.29292651247;NFY{A,B,C}:-1.33943935324;POU2F1..3:-1.38106843027;TAL1_TCF{3,4,12}:-1.38797784972;NANOG{mouse}:-1.40827422572;OCT4_SOX2{dimer}:-1.45084612147;ELK1,4_GABP{A,B1}:-1.67451106582;PAX8:-1.80865868647;YY1:-1.83029264211
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10207-103F9;search_select_hide=table117:FF:10207-103F9
}}
}}

Latest revision as of 13:56, 3 June 2020

Name:heart - tricuspid valve, adult
Species:Human (Homo sapiens)
Library ID:CNhs12857
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexM
age77
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyBiochain
collaborationNA
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberR1234136-10
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005003
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12857 CAGE DRX008662 DRR009534
Accession ID Hg19

Library idBAMCTSS
CNhs12857 DRZ000959 DRZ002344
Accession ID Hg38

Library idBAMCTSS
CNhs12857 DRZ012309 DRZ013694
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis1.13
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.362
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.725
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.235
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.235
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0115
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.275
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle1.221
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0.235
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0.235
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.324
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.282
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.958
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.235
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.199
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.235
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0716
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.63
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.387
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.387
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.122
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.235
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0.311
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12857

Jaspar motifP-value
MA0002.20.00454
MA0003.10.574
MA0004.10.111
MA0006.10.922
MA0007.10.682
MA0009.10.218
MA0014.10.0958
MA0017.10.333
MA0018.20.247
MA0019.10.949
MA0024.10.00222
MA0025.10.147
MA0027.10.916
MA0028.18.74207e-7
MA0029.10.981
MA0030.10.786
MA0031.10.844
MA0035.20.606
MA0038.10.00848
MA0039.20.00614
MA0040.10.517
MA0041.10.54
MA0042.10.851
MA0043.10.701
MA0046.10.0558
MA0047.20.634
MA0048.10.543
MA0050.10.731
MA0051.10.875
MA0052.18.02048e-8
MA0055.10.153
MA0057.10.72
MA0058.10.0143
MA0059.10.124
MA0060.12.93549e-8
MA0061.10.481
MA0062.21.70683e-11
MA0065.20.0308
MA0066.10.156
MA0067.10.791
MA0068.10.124
MA0069.10.506
MA0070.10.293
MA0071.10.298
MA0072.10.229
MA0073.10.967
MA0074.10.97
MA0076.11.44707e-10
MA0077.10.374
MA0078.10.8
MA0079.20.556
MA0080.20.00924
MA0081.10.117
MA0083.10.00755
MA0084.10.388
MA0087.10.339
MA0088.10.0424
MA0090.10.00308
MA0091.10.451
MA0092.10.208
MA0093.10.053
MA0099.29.34849e-10
MA0100.10.0146
MA0101.10.301
MA0102.20.0437
MA0103.15.79785e-4
MA0104.20.146
MA0105.10.0228
MA0106.10.912
MA0107.10.131
MA0108.24.93993e-14
MA0111.10.393
MA0112.20.23
MA0113.10.0169
MA0114.10.0488
MA0115.10.556
MA0116.10.00478
MA0117.10.836
MA0119.10.199
MA0122.10.523
MA0124.10.584
MA0125.10.174
MA0131.10.722
MA0135.10.111
MA0136.16.81433e-4
MA0137.21.74782e-5
MA0138.20.479
MA0139.11.97769e-4
MA0140.10.338
MA0141.10.661
MA0142.10.0408
MA0143.10.558
MA0144.10.00687
MA0145.10.66
MA0146.10.0675
MA0147.10.324
MA0148.10.782
MA0149.10.588
MA0150.10.0831
MA0152.10.116
MA0153.10.256
MA0154.10.267
MA0155.10.396
MA0156.11.14343e-5
MA0157.10.514
MA0159.10.302
MA0160.10.871
MA0162.10.206
MA0163.10.00158
MA0164.10.974
MA0258.10.599
MA0259.10.539



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12857

Novel motifP-value
10.39
100.23
1000.946
1010.806
1020.207
1030.00856
1040.465
1050.379
1060.155
1070.043
1080.0566
1090.00601
110.216
1100.185
1110.732
1120.542
1130.0158
1140.855
1150.17
1160.912
1170.0331
1180.0607
1190.192
120.741
1200.0853
1210.256
1220.194
1230.035
1240.461
1250.609
1260.998
1270.0658
1280.141
1290.412
130.538
1300.286
1310.225
1320.183
1330.27
1340.485
1350.938
1360.0308
1370.396
1380.724
1390.127
140.76
1400.0584
1410.65
1420.704
1430.106
1440.879
1450.339
1460.759
1470.207
1480.861
1490.598
150.278
1500.806
1510.775
1520.909
1530.0479
1540.782
1550.363
1560.463
1570.406
1580.294
1590.4
160.0104
1600.445
1610.0558
1620.946
1630.87
1640.478
1650.0919
1660.581
1670.783
1680.642
1690.308
170.678
180.103
190.902
20.726
200.946
210.538
220.715
230.104
240.0154
250.116
260.721
270.0381
280.998
295.29635e-4
30.378
300.671
310.704
320.0161
330.129
340.365
350.859
360.18
370.249
380.66
390.0723
40.313
400.00583
410.414
420.759
430.579
440.196
450.79
460.633
470.0134
480.135
490.734
50.663
500.278
510.588
520.137
530.289
540.649
550.933
560.41
570.878
580.473
590.0889
60.289
600.468
610.11
620.464
630.471
640.148
650.645
660.0206
670.485
680.378
690.338
70.391
700.356
710.0875
720.709
730.361
740.73
750.0378
760.689
770.655
780.947
790.87
80.209
800.884
810.476
820.88
830.996
840.71
850.088
860.651
872.22422e-5
880.555
890.264
90.995
900.699
910.201
920.297
930.327
940.361
952.93808e-4
960.314
970.574
980.909
990.719



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12857


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002134 (tricuspid valve)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0010313 (neural crest-derived structure)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0003978 (valve)
0002081 (cardiac atrium)
0004151 (cardiac chamber)
0000946 (cardial valve)
0002133 (atrioventricular valve)
0005208 (right atrium valve)
0010317 (germ layer / neural crest derived structure)
0004145 (outflow tract)
0005946 (outflow tract of atrium)
0004535 (cardiovascular system)
0005965 (outflow part of right atrium)
0001009 (circulatory system)
0002078 (right cardiac atrium)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010207 (human heart, tricuspid valve - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006603 (presumptive mesoderm)
UBERON:0003104 (mesenchyme)
UBERON:0005062 (neural fold)
UBERON:0007284 (presumptive neural plate)
UBERON:0010316 (germ layer / neural crest)

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