FF:10207-103F9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005003 | ||
|accession_numbers=CAGE;DRX008662;DRR009534;DRZ000959;DRZ002344;DRZ012309;DRZ013694 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0007100,UBERON:0000948,UBERON:0002134,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0010313,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0003978,UBERON:0002081,UBERON:0004151,UBERON:0000946,UBERON:0002133,UBERON:0005208,UBERON:0010317,UBERON:0004145,UBERON:0005946,UBERON:0004535,UBERON:0005965,UBERON:0001009,UBERON:0002078 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010207 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/heart%2520-%2520tricuspid%2520valve%252c%2520adult.CNhs12857.10207-103F9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/heart%2520-%2520tricuspid%2520valve%252c%2520adult.CNhs12857.10207-103F9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/heart%2520-%2520tricuspid%2520valve%252c%2520adult.CNhs12857.10207-103F9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/heart%2520-%2520tricuspid%2520valve%252c%2520adult.CNhs12857.10207-103F9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/heart%2520-%2520tricuspid%2520valve%252c%2520adult.CNhs12857.10207-103F9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10207-103F9 | |id=FF:10207-103F9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010207 | ||
|is_obsolete= | |||
|library_id=CNhs12857 | |||
|library_id_phase_based=2:CNhs12857 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10207 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10207 | |||
|name=heart - tricuspid valve, adult | |name=heart - tricuspid valve, adult | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12857,LSID973,release012,COMPLETED | |profile_hcage=CNhs12857,LSID973,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.11749553004925,0,0,0.234991060098501,0,-0.160318030086386,0,0.566307312717669,0.339252900094293,0,0,0,0,0,0,0,0,0.234991060098501,0,0,0,0,-0.153323010348428,0,0,0,0.19331600339248,0,0.400851337376731,0,0,0.528796021096397,0,0,0,0,0,0,0,0,0,0,0.234991060098501,0,0.265535001687216,0.229461022168054,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0.149043853660631,0,0.137998698855896,0,0,0.137647432885404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234991060098501,0,0,0,0,0,0,0.14885007030929,0.0595099933317835,0,0.0709990266910244,0.258300569761898,0.524192308830109,0,0.177260603044837,0.347060320693032,0.565662956127899,0,0.234991060098501,0.11749553004925,0.234991060098501,0.400773882407082,0.42187294903879,0,0,0,0,0,0,0,0,0,0,0.11749553004925,0.234991060098501,0,0,0,0,0,0.0969424094700185,0,0,0,0.266715162944529,0.404716644879456,0,0,0,0.11749553004925,0,0 | |||
|repeat_enrich_byname=0.166646799021133,0,0,0,0.400773882407082,0.234991060098501,0.234991060098501,0,0.234991060098501,0,0.661752610875259,0.386632006784959,0.234991060098501,0.234991060098501,0,0,0.340699501922392,0,0.508839414240592,-0.143515142523472,0,0,0.0091152775670635,0,0,0,0.071094557714882,0.828852141831296,0,0.828852141831296,0.91268588434854,0,0.106871193145936,0,1.19290036975316,0,0,0,0,0.370797585447755,0.356280379976852,0,0.28208488102476,1.11797514565362,0,0,0,0,-0.152745139285074,0,0.11411157630476,0.152270891775084,0.234991060098501,0.0132648904921575,0.188186401206121,0,0,0,0.134022163196837,-0.430500536184932,0,0,0.0715361516406055,0.274993323613611,0,0,1.44904856756601,0,0.16933409563876,-0.248868050382253,0,0,0,0,0.386632006784959,0,0.366900146871645,0.234991060098501,0,0,0.587878377207956,0,0,0.761283763260952,0.0596434101059897,0,0,0.234991060098501,0,0.0212904196444149,0,0,0.609639477036034,-0.0766045772385355,0.045349690831704,0.241333658142009,0,0.196419506634875,0.343268072538642,0.810735144726953,0.347060320693032,0.23923015741382,-0.189981719549847,0.0806574861716388,-0.204056624541639,-0.124520018238752,0.0354995133455122,0.599708881281493,0.139587514815951,0.398374417707688,-0.0113665893380033,0,0,0.309123080305655,0.35555651244194,0.0505828257213299,0.234991060098501,0.338737427354522,0.0403172066853671,0.140216789605593,-0.0177111187698745,-0.0597654008109285,0.0474566848510323,1.3349978859954,0.455249431451946,0.0722183217166152,0.17053531731506,0.0383409442280098,0.498809233644789,0.147239634395778,0.075483671608459,-0.287102873462534,0.0459264376965801,0,0.465246762528038,0.166646799021133,0,0.306928044735929,0.063975155361589,0.386632006784959,0,0.294011498081856,0.234991060098501,0,0,0,0.386632006784959,-0.0892519867456836,0.721269572387316,0.00213549854295611,0,0.156371828816439,0.0555248805669175,-0.103970076960107,0,0.199426343250473,0.169323182086636,0,0.39457312710887,0.0286910121946982,0.191038389735602,0.447030852462769,0.242528387147097,0.302473770424501,-0.0584468268118252,0.283727146745887,0.274544981242275,0.101562811050222,0.802650814038532,0.00834778881232556,0.410682401169501,0.0248290343095355,0.589429829215974,0.935408459340038,0.167154062155247,0.14680364885104,0.18431503549191,0.479140030604619,0.724868575816238,0.090793466738721,0.146032921953245,-0.381156897022082,0.239531313210526,0.766870617448232,-0.089889268118209,0,0.138335954900545,1.84272042372677,0,-0.090334441343664,0.0254549937007469,0.498809233644789,-0.150367083334639,0.214989917835958,0.231070192350284,-0.138989456679195,0,-0.0101150937058906,0.234991060098501,0,0.127638362419641,-0.000484977665887815,0,0.0849146205882211,0.434168102435203,0.492206190035599,0.119019986663567,0.498809233644789,0,0.227088390960543,0.00407784762922123,0,0.055824547057229,0,-0.0319049467506775,0.3345520357212,0,0.575298911491606,0,0,-0.177527765965176,0.234991060098501,0.0726900201726035,0,0,-0.132385766549573,0,0,0.11749553004925,0.498809233644789,-0.00194968716528498,0,0,0.234991060098501,0,0,0,0.10182227933001,0.502504230618374,-0.119842270117947,0,-0.35879841792184,0,0,0,0,0,0.0338875230190234,0.123192863108314,0,0.0374520871751165,0.136556202431826,-0.12301741567642,0,0,0,0.184363712949662,0.170908604231484,-0.203236562094724,0,0.529889904377628,0,0,0,0,0.14885007030929,0,0,0,0,0.177260603044837,-0.07471195697007,0,0,0,0.84374589807758,0,0,0,0.0775637506416726,0.151128014758296,0,0,0,0.0929866774930659,0.264480647261473,0.153409180551659,0,0.179760584965609,-0.689762991599838,-0.295421260126844,0,0,0.721578501202713,0,0.183470544498909,0.00742669501535187,0.0204618881143948,0,0.0701353576384505,0,0,0.11749553004925,0,0.386632006784959,0,0.0206765476987453,0.356981001314101,0,0,0,0.234991060098501,0.386632006784959,0,0,0,0.234991060098501,0,-0.0604483659156398,-0.0922240566585104,0.0641363919722211,0,0,0,0,0.728669093020724,0.234991060098501,0.169209980313576,0.200863431126881,0,0,0.105289924379038,0,0,0,0.11749553004925,0,-0.236434879564741,0.11749553004925,0,0.850820435392282,0.17481338307093,0,0.137998698855896,0,0,0,0.234991060098501,0.678505800188586,0,0,-0.0423710720950131,0,0.205270590449816,0,0,0,0,0,0,0,0,0,0.11749553004925,0,-0.123319086035448,0.566307312717669,0,0.234991060098501,0,0,0,0,0,1.06398796334205,0,0,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,-0.160318030086386,0.234991060098501,0,0,0.11749553004925,0,0.402849826271202,0,0,0,0,0,0,0,0,0,0,0,0,0.19331600339248,0,0,-0.0171017392705157,0.0815296092429672,0.298659631293839,0.178132113935902,0,0,-0.0393123492405624,0,0,0,0,0,0,0.161975579363952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11749553004925,0,0.11749553004925,0.214585562151726,0,0,0,0,0,0,0,0.400851337376731,0,0,0.0254627202487245,0,0,0,0,0,0,0.342404017052031,0.425144859696479,0.213085171327227,0,0,0.386632006784959,0.138930430910024,0,0,0.100381544695118,0,0.521100989789055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234991060098501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.15332301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| |||
|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number=R1234136-10 | |rna_catalog_number=R1234136-10 | ||
| Line 56: | Line 78: | ||
|rna_tube_id=103F9 | |rna_tube_id=103F9 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age=77 | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.93232624300495e-223!GO:0005737;cytoplasm;6.77404705353418e-162!GO:0043226;organelle;1.31003775444431e-140!GO:0043229;intracellular organelle;3.67082493488559e-140!GO:0043227;membrane-bound organelle;1.08147716159237e-124!GO:0043231;intracellular membrane-bound organelle;1.08147716159237e-124!GO:0005515;protein binding;5.28468159353737e-110!GO:0044444;cytoplasmic part;1.13756649498727e-101!GO:0044422;organelle part;3.57426255327522e-85!GO:0044446;intracellular organelle part;7.61377913876988e-84!GO:0032991;macromolecular complex;4.7814970676197e-69!GO:0003723;RNA binding;1.91293108416681e-58!GO:0044238;primary metabolic process;1.99111361058415e-56!GO:0043170;macromolecule metabolic process;2.31512354606157e-56!GO:0030529;ribonucleoprotein complex;6.31439547632865e-55!GO:0044237;cellular metabolic process;3.92928994985122e-54!GO:0043233;organelle lumen;2.55561560791953e-52!GO:0031974;membrane-enclosed lumen;2.55561560791953e-52!GO:0005634;nucleus;3.04398404220907e-50!GO:0044428;nuclear part;3.69924574964793e-50!GO:0016043;cellular component organization and biogenesis;6.19241375827875e-46!GO:0019538;protein metabolic process;1.08182742974908e-42!GO:0044260;cellular macromolecule metabolic process;3.12025471565449e-37!GO:0044267;cellular protein metabolic process;2.48165144103199e-36!GO:0043234;protein complex;4.80182008967885e-36!GO:0005739;mitochondrion;1.07465993319671e-35!GO:0006396;RNA processing;7.37811851034526e-35!GO:0033036;macromolecule localization;1.28559251832432e-34!GO:0031090;organelle membrane;1.44968975475392e-34!GO:0015031;protein transport;3.36659757353534e-33!GO:0031981;nuclear lumen;3.54584288667933e-33!GO:0006412;translation;3.10086937322993e-32!GO:0043283;biopolymer metabolic process;1.65712079096522e-31!GO:0008104;protein localization;2.63794094777706e-31!GO:0045184;establishment of protein localization;2.77098800770414e-31!GO:0010467;gene expression;2.9439371301227e-31!GO:0046907;intracellular transport;8.09123184300041e-31!GO:0016071;mRNA metabolic process;1.35076415224697e-30!GO:0005829;cytosol;1.44494862069831e-30!GO:0005840;ribosome;3.27584931455354e-30!GO:0031967;organelle envelope;7.7682648212067e-29!GO:0031975;envelope;1.30727781604555e-28!GO:0008380;RNA splicing;1.6821262002541e-27!GO:0044429;mitochondrial part;7.11507337895081e-27!GO:0006886;intracellular protein transport;8.15160779114726e-26!GO:0003735;structural constituent of ribosome;1.36560212634571e-25!GO:0000166;nucleotide binding;1.60297589830022e-24!GO:0006397;mRNA processing;1.65782177600809e-24!GO:0033279;ribosomal subunit;8.06863870180818e-24!GO:0009059;macromolecule biosynthetic process;3.48560771476218e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.20044604011316e-22!GO:0044249;cellular biosynthetic process;5.90555642098436e-22!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.2842786574589e-21!GO:0043228;non-membrane-bound organelle;1.87720868299101e-21!GO:0043232;intracellular non-membrane-bound organelle;1.87720868299101e-21!GO:0065003;macromolecular complex assembly;4.10086181961716e-21!GO:0009058;biosynthetic process;1.22070315707251e-20!GO:0022607;cellular component assembly;1.2963335698586e-20!GO:0051649;establishment of cellular localization;3.01453725864267e-20!GO:0005654;nucleoplasm;3.64179950133076e-20!GO:0051641;cellular localization;5.56878885654603e-20!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.7728568128107e-20!GO:0008134;transcription factor binding;1.15094134932819e-19!GO:0005740;mitochondrial envelope;1.19987609118422e-19!GO:0031966;mitochondrial membrane;5.15020998387343e-19!GO:0005681;spliceosome;2.66895089189863e-18!GO:0044445;cytosolic part;4.0752969568702e-18!GO:0006996;organelle organization and biogenesis;4.42288756965408e-18!GO:0048523;negative regulation of cellular process;6.47280570272681e-18!GO:0044451;nucleoplasm part;1.58050593531114e-17!GO:0019866;organelle inner membrane;1.9884365550479e-17!GO:0050789;regulation of biological process;2.33419340517288e-17!GO:0032553;ribonucleotide binding;9.21279947242504e-17!GO:0032555;purine ribonucleotide binding;9.21279947242504e-17!GO:0017076;purine nucleotide binding;1.12179401365242e-16!GO:0048519;negative regulation of biological process;2.55594476345122e-16!GO:0017111;nucleoside-triphosphatase activity;2.84406965435744e-16!GO:0016462;pyrophosphatase activity;3.00865233770017e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.18847247798061e-16!GO:0005743;mitochondrial inner membrane;3.94074618075145e-16!GO:0050794;regulation of cellular process;5.40293172120321e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;5.63417857724122e-16!GO:0008092;cytoskeletal protein binding;5.93105161533053e-16!GO:0006119;oxidative phosphorylation;8.99940791827895e-16!GO:0016070;RNA metabolic process;1.00767234896048e-15!GO:0005730;nucleolus;1.33304880006366e-15!GO:0005794;Golgi apparatus;1.92816433939171e-15!GO:0006457;protein folding;2.60738293566354e-15!GO:0006605;protein targeting;3.13536035812946e-15!GO:0012505;endomembrane system;4.12567835321224e-15!GO:0048770;pigment granule;1.43921662850334e-14!GO:0042470;melanosome;1.43921662850334e-14!GO:0022618;protein-RNA complex assembly;1.62854765263308e-14!GO:0043412;biopolymer modification;2.37098104785511e-14!GO:0016192;vesicle-mediated transport;2.50097451211006e-14!GO:0065007;biological regulation;6.14227367648661e-14!GO:0003676;nucleic acid binding;6.7195655144844e-14!GO:0019941;modification-dependent protein catabolic process;8.92561792775141e-14!GO:0043632;modification-dependent macromolecule catabolic process;8.92561792775141e-14!GO:0006511;ubiquitin-dependent protein catabolic process;9.01417428770753e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.06242341775217e-13!GO:0044265;cellular macromolecule catabolic process;1.14337921908729e-13!GO:0012501;programmed cell death;1.16156258562669e-13!GO:0005783;endoplasmic reticulum;1.30091422597667e-13!GO:0006512;ubiquitin cycle;1.560125015266e-13!GO:0044455;mitochondrial membrane part;1.78115195092012e-13!GO:0016874;ligase activity;1.98049383048567e-13!GO:0006366;transcription from RNA polymerase II promoter;2.34521363104022e-13!GO:0006915;apoptosis;2.5804375879383e-13!GO:0044257;cellular protein catabolic process;2.93262785549416e-13!GO:0005746;mitochondrial respiratory chain;3.17887930864864e-13!GO:0015935;small ribosomal subunit;3.44263700869253e-13!GO:0030029;actin filament-based process;5.48990433235296e-13!GO:0043687;post-translational protein modification;5.55408589310617e-13!GO:0006464;protein modification process;7.08618250284559e-13!GO:0006913;nucleocytoplasmic transport;9.73198012977195e-13!GO:0003712;transcription cofactor activity;1.03812778613898e-12!GO:0008219;cell death;1.06726370247352e-12!GO:0016265;death;1.06726370247352e-12!GO:0008135;translation factor activity, nucleic acid binding;1.07326912603908e-12!GO:0032559;adenyl ribonucleotide binding;1.17240641125431e-12!GO:0030554;adenyl nucleotide binding;1.80806328623609e-12!GO:0005524;ATP binding;2.13758395209382e-12!GO:0051169;nuclear transport;2.30743468691568e-12!GO:0051082;unfolded protein binding;2.99073838464687e-12!GO:0030036;actin cytoskeleton organization and biogenesis;4.24215487106976e-12!GO:0043285;biopolymer catabolic process;5.06321880215434e-12!GO:0016564;transcription repressor activity;7.69848014830749e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.02390502627586e-11!GO:0003954;NADH dehydrogenase activity;1.02390502627586e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.02390502627586e-11!GO:0015934;large ribosomal subunit;1.04203696641742e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.46190090505363e-11!GO:0048193;Golgi vesicle transport;3.98215044960821e-11!GO:0003779;actin binding;6.03427768626275e-11!GO:0006793;phosphorus metabolic process;6.45119104056786e-11!GO:0006796;phosphate metabolic process;6.45119104056786e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.17808850456166e-10!GO:0016604;nuclear body;1.43432230015256e-10!GO:0030163;protein catabolic process;2.40084503169668e-10!GO:0009057;macromolecule catabolic process;3.0094298934197e-10!GO:0006413;translational initiation;3.18163468072952e-10!GO:0006461;protein complex assembly;4.31478286657737e-10!GO:0017038;protein import;4.71655823747381e-10!GO:0005635;nuclear envelope;5.16827700260465e-10!GO:0031965;nuclear membrane;7.00092022987542e-10!GO:0000502;proteasome complex (sensu Eukaryota);7.11500850954967e-10!GO:0044432;endoplasmic reticulum part;7.90494106959758e-10!GO:0003743;translation initiation factor activity;8.58110160363993e-10!GO:0031980;mitochondrial lumen;8.80284811558243e-10!GO:0005759;mitochondrial matrix;8.80284811558243e-10!GO:0030964;NADH dehydrogenase complex (quinone);8.92354879334217e-10!GO:0045271;respiratory chain complex I;8.92354879334217e-10!GO:0005747;mitochondrial respiratory chain complex I;8.92354879334217e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.0393533829544e-09!GO:0042775;organelle ATP synthesis coupled electron transport;1.15287407710779e-09!GO:0042773;ATP synthesis coupled electron transport;1.15287407710779e-09!GO:0031324;negative regulation of cellular metabolic process;1.16020673751071e-09!GO:0006446;regulation of translational initiation;1.16020673751071e-09!GO:0008565;protein transporter activity;1.56529755569393e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.32708814683881e-09!GO:0016310;phosphorylation;2.51024971041936e-09!GO:0009892;negative regulation of metabolic process;3.57763086117736e-09!GO:0008639;small protein conjugating enzyme activity;3.84196005759375e-09!GO:0008361;regulation of cell size;4.29079808166092e-09!GO:0016887;ATPase activity;4.9732196662047e-09!GO:0004842;ubiquitin-protein ligase activity;4.98130833807879e-09!GO:0016607;nuclear speck;5.07830970231534e-09!GO:0015629;actin cytoskeleton;5.30879490837752e-09!GO:0005793;ER-Golgi intermediate compartment;5.64136153520763e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.39959918393181e-09!GO:0003714;transcription corepressor activity;6.62048493846454e-09!GO:0016049;cell growth;7.52774618327424e-09!GO:0006606;protein import into nucleus;1.0462274877944e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;1.10394143326895e-08!GO:0000375;RNA splicing, via transesterification reactions;1.10394143326895e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.10394143326895e-08!GO:0019899;enzyme binding;1.16144383936366e-08!GO:0051246;regulation of protein metabolic process;1.1984742006006e-08!GO:0051170;nuclear import;1.20646029744872e-08!GO:0042254;ribosome biogenesis and assembly;1.59785369724734e-08!GO:0005788;endoplasmic reticulum lumen;1.62735520482043e-08!GO:0016481;negative regulation of transcription;1.8982565570948e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.53501276703481e-08!GO:0044248;cellular catabolic process;3.37086628981781e-08!GO:0007264;small GTPase mediated signal transduction;3.84382191244044e-08!GO:0019787;small conjugating protein ligase activity;4.84137100542361e-08!GO:0042623;ATPase activity, coupled;7.27578209074193e-08!GO:0031252;leading edge;9.07712254466222e-08!GO:0006950;response to stress;1.07284933683834e-07!GO:0042981;regulation of apoptosis;1.15777600742269e-07!GO:0001558;regulation of cell growth;1.19908092771269e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.22791058050937e-07!GO:0044453;nuclear membrane part;1.22946466075877e-07!GO:0043067;regulation of programmed cell death;1.26276015453441e-07!GO:0003924;GTPase activity;2.15606993464521e-07!GO:0051789;response to protein stimulus;3.16202853514947e-07!GO:0006986;response to unfolded protein;3.16202853514947e-07!GO:0004386;helicase activity;3.70665536937821e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.50236935976867e-07!GO:0007243;protein kinase cascade;4.65019158394213e-07!GO:0043069;negative regulation of programmed cell death;5.21488386639634e-07!GO:0007010;cytoskeleton organization and biogenesis;5.43825423198028e-07!GO:0031988;membrane-bound vesicle;5.51437475477512e-07!GO:0005768;endosome;6.9037086404124e-07!GO:0051186;cofactor metabolic process;6.93737807716217e-07!GO:0043066;negative regulation of apoptosis;6.93737807716217e-07!GO:0031982;vesicle;6.98894127612524e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.47291602073145e-07!GO:0005761;mitochondrial ribosome;7.70630265631515e-07!GO:0000313;organellar ribosome;7.70630265631515e-07!GO:0009055;electron carrier activity;7.73670854263924e-07!GO:0005643;nuclear pore;7.99803902816154e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.07027887364027e-07!GO:0009966;regulation of signal transduction;9.22469397196299e-07!GO:0016023;cytoplasmic membrane-bound vesicle;9.61444614030678e-07!GO:0008026;ATP-dependent helicase activity;9.75578173842157e-07!GO:0016044;membrane organization and biogenesis;1.11479573944186e-06!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.23101061678727e-06!GO:0001944;vasculature development;1.38873678808191e-06!GO:0048522;positive regulation of cellular process;1.44970588967248e-06!GO:0031410;cytoplasmic vesicle;1.53723861447281e-06!GO:0007265;Ras protein signal transduction;1.54729091139306e-06!GO:0045786;negative regulation of progression through cell cycle;1.61915377943881e-06!GO:0006403;RNA localization;2.03443402489002e-06!GO:0001568;blood vessel development;2.36827194391889e-06!GO:0016881;acid-amino acid ligase activity;2.37281680121981e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.38531892583252e-06!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.50111512555758e-06!GO:0050657;nucleic acid transport;2.84755003794251e-06!GO:0051236;establishment of RNA localization;2.84755003794251e-06!GO:0050658;RNA transport;2.84755003794251e-06!GO:0045892;negative regulation of transcription, DNA-dependent;2.90261397273713e-06!GO:0006916;anti-apoptosis;3.24040666107965e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.36457003383029e-06!GO:0040008;regulation of growth;3.47967776235147e-06!GO:0005525;GTP binding;3.8581521077904e-06!GO:0007242;intracellular signaling cascade;4.1818611102179e-06!GO:0005667;transcription factor complex;4.59753816006967e-06!GO:0044431;Golgi apparatus part;5.63040243641827e-06!GO:0046930;pore complex;5.81131313570593e-06!GO:0048518;positive regulation of biological process;7.45522443604382e-06!GO:0019222;regulation of metabolic process;8.22196899322857e-06!GO:0006259;DNA metabolic process;8.39352464220891e-06!GO:0045333;cellular respiration;9.12430179615314e-06!GO:0016563;transcription activator activity;9.72029008243318e-06!GO:0005083;small GTPase regulator activity;1.08009789217309e-05!GO:0009060;aerobic respiration;1.22099907348522e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.24842800434406e-05!GO:0006364;rRNA processing;1.37224210630808e-05!GO:0015986;ATP synthesis coupled proton transport;1.38317766128106e-05!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.38317766128106e-05!GO:0006163;purine nucleotide metabolic process;1.56757212544044e-05!GO:0051128;regulation of cellular component organization and biogenesis;1.57355133836881e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.73400475670165e-05!GO:0019829;cation-transporting ATPase activity;1.86604391228095e-05!GO:0003713;transcription coactivator activity;1.95413143053147e-05!GO:0005789;endoplasmic reticulum membrane;2.06030940042304e-05!GO:0065002;intracellular protein transport across a membrane;2.21381056006793e-05!GO:0006732;coenzyme metabolic process;2.28938161079127e-05!GO:0030532;small nuclear ribonucleoprotein complex;2.37199160137761e-05!GO:0008286;insulin receptor signaling pathway;2.43490256876499e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.57081605531194e-05!GO:0004812;aminoacyl-tRNA ligase activity;2.57081605531194e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.57081605531194e-05!GO:0016072;rRNA metabolic process;2.61939648189247e-05!GO:0030695;GTPase regulator activity;2.69881019213477e-05!GO:0009259;ribonucleotide metabolic process;2.82544190385855e-05!GO:0032561;guanyl ribonucleotide binding;2.91128760746186e-05!GO:0019001;guanyl nucleotide binding;2.91128760746186e-05!GO:0045259;proton-transporting ATP synthase complex;3.01225091989061e-05!GO:0009150;purine ribonucleotide metabolic process;3.73176218203645e-05!GO:0007517;muscle development;4.46883357725173e-05!GO:0007266;Rho protein signal transduction;4.50290175453864e-05!GO:0043566;structure-specific DNA binding;5.69245563566961e-05!GO:0006888;ER to Golgi vesicle-mediated transport;5.89972146647736e-05!GO:0048475;coated membrane;5.95910832484177e-05!GO:0030117;membrane coat;5.95910832484177e-05!GO:0043038;amino acid activation;5.95910832484177e-05!GO:0006418;tRNA aminoacylation for protein translation;5.95910832484177e-05!GO:0043039;tRNA aminoacylation;5.95910832484177e-05!GO:0003724;RNA helicase activity;6.01121533184983e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.07255175408964e-05!GO:0051028;mRNA transport;6.2801832706785e-05!GO:0046034;ATP metabolic process;7.12627503535004e-05!GO:0032446;protein modification by small protein conjugation;7.30209519415272e-05!GO:0030027;lamellipodium;7.49598926886321e-05!GO:0016567;protein ubiquitination;8.42716358117801e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.15012612155177e-05!GO:0009199;ribonucleoside triphosphate metabolic process;9.15012612155177e-05!GO:0030120;vesicle coat;9.16508547236379e-05!GO:0030662;coated vesicle membrane;9.16508547236379e-05!GO:0006164;purine nucleotide biosynthetic process;9.52005033827071e-05!GO:0016197;endosome transport;9.61973937244982e-05!GO:0006399;tRNA metabolic process;0.000107302615785583!GO:0009141;nucleoside triphosphate metabolic process;0.000123409540571295!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000123409540571295!GO:0009205;purine ribonucleoside triphosphate metabolic process;0.000126901639470101!GO:0009144;purine nucleoside triphosphate metabolic process;0.000126901639470101!GO:0000139;Golgi membrane;0.000130653061128465!GO:0001525;angiogenesis;0.00013368314778608!GO:0015980;energy derivation by oxidation of organic compounds;0.000138634568245187!GO:0048514;blood vessel morphogenesis;0.000149483328400939!GO:0016568;chromatin modification;0.000150004818382612!GO:0044440;endosomal part;0.000158876157930875!GO:0010008;endosome membrane;0.000158876157930875!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000162468634749191!GO:0006091;generation of precursor metabolites and energy;0.000164400635338598!GO:0045893;positive regulation of transcription, DNA-dependent;0.000165305465552788!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000165735853268796!GO:0006754;ATP biosynthetic process;0.000172580993631954!GO:0006753;nucleoside phosphate metabolic process;0.000172580993631954!GO:0005741;mitochondrial outer membrane;0.000174598473989681!GO:0000245;spliceosome assembly;0.000175529858155591!GO:0009056;catabolic process;0.000176612074712655!GO:0000151;ubiquitin ligase complex;0.000183341007514775!GO:0006402;mRNA catabolic process;0.000213129486636962!GO:0006099;tricarboxylic acid cycle;0.00021727367563095!GO:0046356;acetyl-CoA catabolic process;0.00021727367563095!GO:0001726;ruffle;0.000217463690231511!GO:0006897;endocytosis;0.00021905333210041!GO:0010324;membrane invagination;0.00021905333210041!GO:0009152;purine ribonucleotide biosynthetic process;0.000221479074064439!GO:0005791;rough endoplasmic reticulum;0.000221479074064439!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000230192759894899!GO:0016469;proton-transporting two-sector ATPase complex;0.00023104414419351!GO:0001666;response to hypoxia;0.000231733061129983!GO:0051726;regulation of cell cycle;0.000234373247081052!GO:0000074;regulation of progression through cell cycle;0.000234435891436847!GO:0009142;nucleoside triphosphate biosynthetic process;0.000253608635016818!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000253608635016818!GO:0042802;identical protein binding;0.000270712495154823!GO:0005769;early endosome;0.000310887517966577!GO:0051188;cofactor biosynthetic process;0.000311612762980538!GO:0009260;ribonucleotide biosynthetic process;0.000340799789674143!GO:0048471;perinuclear region of cytoplasm;0.000345981075472299!GO:0006084;acetyl-CoA metabolic process;0.000352569163201993!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000353579833578314!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000353579833578314!GO:0019867;outer membrane;0.00035376966384835!GO:0003697;single-stranded DNA binding;0.00035569539152795!GO:0006613;cotranslational protein targeting to membrane;0.000389024977813316!GO:0005048;signal sequence binding;0.000403149248627935!GO:0030867;rough endoplasmic reticulum membrane;0.00040450064181552!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000405203753668112!GO:0031968;organelle outer membrane;0.000408018954033238!GO:0048468;cell development;0.000431764531691641!GO:0045941;positive regulation of transcription;0.000438585023668623!GO:0005856;cytoskeleton;0.000499440850071842!GO:0008047;enzyme activator activity;0.000516081747587771!GO:0005839;proteasome core complex (sensu Eukaryota);0.000627075045655694!GO:0007049;cell cycle;0.000628524463121601!GO:0051427;hormone receptor binding;0.000646109711945469!GO:0030016;myofibril;0.000651554685350682!GO:0005798;Golgi-associated vesicle;0.000743563580531293!GO:0005912;adherens junction;0.000773011257924091!GO:0051187;cofactor catabolic process;0.000793679818591021!GO:0043292;contractile fiber;0.000806078350591643!GO:0051270;regulation of cell motility;0.000830122728879839!GO:0044449;contractile fiber part;0.00088331352298805!GO:0043623;cellular protein complex assembly;0.000886400060090863!GO:0005770;late endosome;0.000952787993686463!GO:0009109;coenzyme catabolic process;0.000988686007888899!GO:0008307;structural constituent of muscle;0.00100663514902828!GO:0005096;GTPase activator activity;0.00101965259941549!GO:0009108;coenzyme biosynthetic process;0.00103470840908932!GO:0016740;transferase activity;0.00103470840908932!GO:0019843;rRNA binding;0.00105755108273729!GO:0003702;RNA polymerase II transcription factor activity;0.00115453750504677!GO:0003729;mRNA binding;0.0011763860506534!GO:0035257;nuclear hormone receptor binding;0.00122351024899171!GO:0031072;heat shock protein binding;0.0012778079252483!GO:0051168;nuclear export;0.00140419872086137!GO:0008154;actin polymerization and/or depolymerization;0.00144760200057914!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0014732673142061!GO:0006607;NLS-bearing substrate import into nucleus;0.00149050088819242!GO:0009117;nucleotide metabolic process;0.00149386889614898!GO:0007005;mitochondrion organization and biogenesis;0.00151881060739975!GO:0016301;kinase activity;0.0015215668997055!GO:0009967;positive regulation of signal transduction;0.00155317955020766!GO:0030041;actin filament polymerization;0.00160502898785627!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00168470435523068!GO:0033673;negative regulation of kinase activity;0.00176434329341126!GO:0006469;negative regulation of protein kinase activity;0.00176434329341126!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00185818823930286!GO:0031323;regulation of cellular metabolic process;0.00186234338124355!GO:0004298;threonine endopeptidase activity;0.00193449688192837!GO:0045792;negative regulation of cell size;0.00196593512001681!GO:0008139;nuclear localization sequence binding;0.00203169751151978!GO:0006892;post-Golgi vesicle-mediated transport;0.00209471332824071!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00214387486545693!GO:0006414;translational elongation;0.00215600838684486!GO:0030133;transport vesicle;0.00219939867641801!GO:0030308;negative regulation of cell growth;0.00228183451582144!GO:0065009;regulation of a molecular function;0.00230624381223065!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00237642617152512!GO:0008186;RNA-dependent ATPase activity;0.00237963714699465!GO:0035258;steroid hormone receptor binding;0.00248678051968907!GO:0051087;chaperone binding;0.00248678051968907!GO:0040011;locomotion;0.00250202720389425!GO:0030218;erythrocyte differentiation;0.00254462231262982!GO:0043021;ribonucleoprotein binding;0.00262211613188324!GO:0000902;cell morphogenesis;0.0026278077456618!GO:0032989;cellular structure morphogenesis;0.0026278077456618!GO:0060047;heart contraction;0.00266265586106207!GO:0003015;heart process;0.00266265586106207!GO:0005885;Arp2/3 protein complex;0.00268326187542136!GO:0004674;protein serine/threonine kinase activity;0.00270115807651853!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00270167711914895!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00270167711914895!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00270167711914895!GO:0016779;nucleotidyltransferase activity;0.00270988596681178!GO:0022890;inorganic cation transmembrane transporter activity;0.00273602500481507!GO:0006401;RNA catabolic process;0.00275512224342862!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00282650494207706!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00282650494207706!GO:0033043;regulation of organelle organization and biogenesis;0.00282650494207706!GO:0044452;nucleolar part;0.00285462250696661!GO:0019838;growth factor binding;0.00287624416598783!GO:0040012;regulation of locomotion;0.00287955202591365!GO:0000059;protein import into nucleus, docking;0.0030210253722058!GO:0016859;cis-trans isomerase activity;0.00304059447876552!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00311566512113765!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00318870565425435!GO:0015002;heme-copper terminal oxidase activity;0.00318870565425435!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00318870565425435!GO:0004129;cytochrome-c oxidase activity;0.00318870565425435!GO:0007050;cell cycle arrest;0.00335017155879568!GO:0005865;striated muscle thin filament;0.00335665053406979!GO:0005813;centrosome;0.00352355477475255!GO:0030017;sarcomere;0.00395308501536712!GO:0016853;isomerase activity;0.00418507480429021!GO:0048646;anatomical structure formation;0.00420163438624614!GO:0019902;phosphatase binding;0.00429735813654383!GO:0051056;regulation of small GTPase mediated signal transduction;0.0044105691925479!GO:0003690;double-stranded DNA binding;0.00467426089601902!GO:0051348;negative regulation of transferase activity;0.00484777289620565!GO:0051252;regulation of RNA metabolic process;0.00503504503266863!GO:0005100;Rho GTPase activator activity;0.00527444890558651!GO:0006323;DNA packaging;0.00529898000355903!GO:0008250;oligosaccharyl transferase complex;0.00530022801029984!GO:0030880;RNA polymerase complex;0.00551543380779372!GO:0005905;coated pit;0.00554391659805749!GO:0045454;cell redox homeostasis;0.00563447061570108!GO:0043488;regulation of mRNA stability;0.0059600195614673!GO:0043487;regulation of RNA stability;0.0059600195614673!GO:0008287;protein serine/threonine phosphatase complex;0.00598180623232548!GO:0006612;protein targeting to membrane;0.00598180623232548!GO:0051920;peroxiredoxin activity;0.00614504527979263!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00618625213737652!GO:0001725;stress fiber;0.00619073030338401!GO:0032432;actin filament bundle;0.00619073030338401!GO:0004004;ATP-dependent RNA helicase activity;0.00621626176642132!GO:0004576;oligosaccharyl transferase activity;0.00621626176642132!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00673335711054494!GO:0015399;primary active transmembrane transporter activity;0.00673335711054494!GO:0048659;smooth muscle cell proliferation;0.00681110344182441!GO:0017166;vinculin binding;0.00682791202815378!GO:0030518;steroid hormone receptor signaling pathway;0.00686680172614053!GO:0046983;protein dimerization activity;0.00693876292243411!GO:0031589;cell-substrate adhesion;0.00696470161145619!GO:0006350;transcription;0.00702391091135925!GO:0006752;group transfer coenzyme metabolic process;0.00703675251359441!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00716639612011732!GO:0030118;clathrin coat;0.00745248828288267!GO:0006468;protein amino acid phosphorylation;0.00805514934866916!GO:0045926;negative regulation of growth;0.00807982191677168!GO:0005773;vacuole;0.00809707689565266!GO:0005762;mitochondrial large ribosomal subunit;0.0082790802014483!GO:0000315;organellar large ribosomal subunit;0.0082790802014483!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00843434402537135!GO:0001516;prostaglandin biosynthetic process;0.00846842313373876!GO:0046457;prostanoid biosynthetic process;0.00846842313373876!GO:0031901;early endosome membrane;0.00860487737997474!GO:0006974;response to DNA damage stimulus;0.00862994373954092!GO:0045045;secretory pathway;0.00921223347134017!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00933190347156779!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00933190347156779!GO:0046578;regulation of Ras protein signal transduction;0.00957262606990801!GO:0006383;transcription from RNA polymerase III promoter;0.00964769336417818!GO:0033116;ER-Golgi intermediate compartment membrane;0.00975628033885003!GO:0014706;striated muscle development;0.00978479396277403!GO:0003899;DNA-directed RNA polymerase activity;0.00982958752891498!GO:0030521;androgen receptor signaling pathway;0.00987189238100453!GO:0050811;GABA receptor binding;0.0101468612075382!GO:0003746;translation elongation factor activity;0.0101900886563458!GO:0009893;positive regulation of metabolic process;0.0103268982972004!GO:0035023;regulation of Rho protein signal transduction;0.0105493175038844!GO:0051101;regulation of DNA binding;0.0108497214613887!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0113030198760185!GO:0000428;DNA-directed RNA polymerase complex;0.0113030198760185!GO:0043492;ATPase activity, coupled to movement of substances;0.0118189289496377!GO:0019904;protein domain specific binding;0.0120229238123052!GO:0032535;regulation of cellular component size;0.0121588755089314!GO:0008383;manganese superoxide dismutase activity;0.0121796190235104!GO:0001315;age-dependent response to reactive oxygen species;0.0121796190235104!GO:0043681;protein import into mitochondrion;0.0122962592380541!GO:0008016;regulation of heart contraction;0.0123708027410051!GO:0005815;microtubule organizing center;0.0125253886375102!GO:0008654;phospholipid biosynthetic process;0.0126873504075123!GO:0022415;viral reproductive process;0.0126873504075123!GO:0009719;response to endogenous stimulus;0.0127063184291008!GO:0030659;cytoplasmic vesicle membrane;0.0127540674690469!GO:0004721;phosphoprotein phosphatase activity;0.01295180653391!GO:0030832;regulation of actin filament length;0.013531691496368!GO:0012506;vesicle membrane;0.0135539612816793!GO:0043407;negative regulation of MAP kinase activity;0.0135539612816793!GO:0006979;response to oxidative stress;0.0137894033626547!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0140975070911736!GO:0007167;enzyme linked receptor protein signaling pathway;0.0141139829734565!GO:0005099;Ras GTPase activator activity;0.0141804136673366!GO:0051098;regulation of binding;0.0143397801631123!GO:0015630;microtubule cytoskeleton;0.0143397801631123!GO:0030134;ER to Golgi transport vesicle;0.0143397801631123!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.014391108071019!GO:0000314;organellar small ribosomal subunit;0.0146791089641663!GO:0005763;mitochondrial small ribosomal subunit;0.0146791089641663!GO:0010468;regulation of gene expression;0.0147914826227108!GO:0030833;regulation of actin filament polymerization;0.0147914826227108!GO:0032780;negative regulation of ATPase activity;0.0148575406493959!GO:0030132;clathrin coat of coated pit;0.0148661103528966!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0153441613907311!GO:0008283;cell proliferation;0.0155472205026811!GO:0030127;COPII vesicle coat;0.015580612929871!GO:0012507;ER to Golgi transport vesicle membrane;0.015580612929871!GO:0005862;muscle thin filament tropomyosin;0.0156658162764898!GO:0009165;nucleotide biosynthetic process;0.0159189077328102!GO:0016311;dephosphorylation;0.0160877010893056!GO:0016791;phosphoric monoester hydrolase activity;0.0162563631029649!GO:0048487;beta-tubulin binding;0.0162860485189211!GO:0007160;cell-matrix adhesion;0.0164773108898781!GO:0030334;regulation of cell migration;0.0165319736278959!GO:0009266;response to temperature stimulus;0.0165868456092016!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0168756333648472!GO:0016787;hydrolase activity;0.0184238389258256!GO:0048660;regulation of smooth muscle cell proliferation;0.0187494564844892!GO:0006891;intra-Golgi vesicle-mediated transport;0.0190611121618343!GO:0048500;signal recognition particle;0.0196861174691037!GO:0019903;protein phosphatase binding;0.0196861174691037!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.019928454486308!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.019928454486308!GO:0042805;actinin binding;0.0199498405995935!GO:0045098;type III intermediate filament;0.0202337762394568!GO:0044433;cytoplasmic vesicle part;0.0206482386484301!GO:0051540;metal cluster binding;0.0206482386484301!GO:0051536;iron-sulfur cluster binding;0.0206482386484301!GO:0030658;transport vesicle membrane;0.0209879930230122!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0210017844808995!GO:0030099;myeloid cell differentiation;0.0210017844808995!GO:0046822;regulation of nucleocytoplasmic transport;0.0214556160893935!GO:0030055;cell-matrix junction;0.021483172448211!GO:0006693;prostaglandin metabolic process;0.0216455093413563!GO:0006692;prostanoid metabolic process;0.0216455093413563!GO:0005581;collagen;0.0217960715727823!GO:0022402;cell cycle process;0.0219458790297897!GO:0043284;biopolymer biosynthetic process;0.0221354517979771!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0221721227326616!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0221721227326616!GO:0030119;AP-type membrane coat adaptor complex;0.0222346478288916!GO:0042026;protein refolding;0.0225169427325403!GO:0017022;myosin binding;0.0226868102370519!GO:0030522;intracellular receptor-mediated signaling pathway;0.0231592607029305!GO:0048644;muscle morphogenesis;0.023270398064268!GO:0055008;cardiac muscle morphogensis;0.023270398064268!GO:0004722;protein serine/threonine phosphatase activity;0.023270398064268!GO:0045637;regulation of myeloid cell differentiation;0.023270398064268!GO:0032940;secretion by cell;0.023270398064268!GO:0006611;protein export from nucleus;0.023270398064268!GO:0030155;regulation of cell adhesion;0.0233294635840539!GO:0051539;4 iron, 4 sulfur cluster binding;0.0235116768408654!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0242931728646185!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0246244323948847!GO:0050681;androgen receptor binding;0.0247766349659547!GO:0000060;protein import into nucleus, translocation;0.024830648485398!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0249146799069895!GO:0000323;lytic vacuole;0.0252713597940592!GO:0005764;lysosome;0.0252713597940592!GO:0007015;actin filament organization;0.0252713597940592!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.025350303206047!GO:0006595;polyamine metabolic process;0.025849680924931!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0258624019600742!GO:0051248;negative regulation of protein metabolic process;0.0260192684207002!GO:0009615;response to virus;0.0260270134232198!GO:0031674;I band;0.0262996010043692!GO:0005085;guanyl-nucleotide exchange factor activity;0.0266594998254678!GO:0006417;regulation of translation;0.0269337742313507!GO:0006352;transcription initiation;0.0270629763547054!GO:0018196;peptidyl-asparagine modification;0.0270629763547054!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0270629763547054!GO:0005924;cell-substrate adherens junction;0.0270629763547054!GO:0031625;ubiquitin protein ligase binding;0.0277779998559796!GO:0007006;mitochondrial membrane organization and biogenesis;0.0277893666326926!GO:0005913;cell-cell adherens junction;0.0280680302191566!GO:0004672;protein kinase activity;0.0280752908729223!GO:0006260;DNA replication;0.0283999997028749!GO:0030172;troponin C binding;0.0296067845042354!GO:0044262;cellular carbohydrate metabolic process;0.0303346711669928!GO:0043065;positive regulation of apoptosis;0.0308313462757224!GO:0030131;clathrin adaptor complex;0.0312197839307933!GO:0045947;negative regulation of translational initiation;0.0312197839307933!GO:0043353;enucleate erythrocyte differentiation;0.0316195961431456!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0327373278748381!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0327373278748381!GO:0006405;RNA export from nucleus;0.0330985464347461!GO:0043068;positive regulation of programmed cell death;0.0337172464822015!GO:0030865;cortical cytoskeleton organization and biogenesis;0.034188999777072!GO:0051059;NF-kappaB binding;0.034530478534917!GO:0007004;telomere maintenance via telomerase;0.0351237588534539!GO:0000287;magnesium ion binding;0.03515622435974!GO:0016491;oxidoreductase activity;0.0356281360076179!GO:0007162;negative regulation of cell adhesion;0.0357268885176711!GO:0006984;ER-nuclear signaling pathway;0.0359494977294083!GO:0005637;nuclear inner membrane;0.0359494977294083!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0359620633342397!GO:0035035;histone acetyltransferase binding;0.0360080740222802!GO:0017048;Rho GTPase binding;0.0368517795402317!GO:0003817;complement factor D activity;0.0370787104542761!GO:0004111;creatine kinase activity;0.0375958923015671!GO:0022603;regulation of anatomical structure morphogenesis;0.0378836782984827!GO:0008360;regulation of cell shape;0.0378836782984827!GO:0022604;regulation of cell morphogenesis;0.0378836782984827!GO:0051329;interphase of mitotic cell cycle;0.0381099786472744!GO:0030192;Hsp70/Hsc70 protein regulator activity;0.0382143682953725!GO:0030911;TPR domain binding;0.0383149649031461!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0399510806376802!GO:0050790;regulation of catalytic activity;0.0404654291009001!GO:0000339;RNA cap binding;0.0408572615723563!GO:0008234;cysteine-type peptidase activity;0.0417987823124352!GO:0005669;transcription factor TFIID complex;0.0419183262081295!GO:0030031;cell projection biogenesis;0.0419324004350997!GO:0000049;tRNA binding;0.0421939212914065!GO:0006351;transcription, DNA-dependent;0.0422791599679891!GO:0032774;RNA biosynthetic process;0.0422791599679891!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0425247148425855!GO:0045047;protein targeting to ER;0.0425247148425855!GO:0009112;nucleobase metabolic process;0.0425550815531319!GO:0005832;chaperonin-containing T-complex;0.0438348070501205!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.0443587470435706!GO:0019783;small conjugating protein-specific protease activity;0.0461259469106406!GO:0008312;7S RNA binding;0.0468532485862293!GO:0043086;negative regulation of catalytic activity;0.0472483246790971!GO:0004860;protein kinase inhibitor activity;0.0478344764054299!GO:0004843;ubiquitin-specific protease activity;0.0482034668464159!GO:0007507;heart development;0.0482460607845217!GO:0018193;peptidyl-amino acid modification;0.0484570499904827!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0484570499904827!GO:0031272;regulation of pseudopodium formation;0.0484570499904827!GO:0031269;pseudopodium formation;0.0484570499904827!GO:0031344;regulation of cell projection organization and biogenesis;0.0484570499904827!GO:0031268;pseudopodium organization and biogenesis;0.0484570499904827!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0484570499904827!GO:0031274;positive regulation of pseudopodium formation;0.0484570499904827!GO:0030660;Golgi-associated vesicle membrane;0.0485732925561693!GO:0005159;insulin-like growth factor receptor binding;0.0486146642945691!GO:0000159;protein phosphatase type 2A complex;0.0494785714770681!GO:0030032;lamellipodium biogenesis;0.0495204334032602 | |||
|sample_id=10207 | |sample_id=10207 | ||
|sample_note= | |sample_note= | ||
|sample_sex= | |sample_sex=M | ||
|sample_species=Human (Homo sapiens) | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=FOXP1:3.43064010307;FOXL1:3.04754859681;MEF2{A,B,C,D}:2.85607025581;BPTF:2.81994335688;AR:2.4935221358;STAT2,4,6:2.4098432849;ZBTB16:2.25928065342;NFATC1..3:2.00308248881;HBP1_HMGB_SSRP1_UBTF:1.97499441928;IKZF1:1.86829731063;SRF:1.75691625214;HSF1,2:1.68299909204;RBPJ:1.58640827378;EGR1..3:1.55345359046;MED-1{core}:1.54749120933;SOX5:1.43146818249;IKZF2:1.37814032634;MAZ:1.3611887823;TBP:1.35182988494;PATZ1:1.32052045467;EVI1:1.2330214813;PAX6:1.21483965475;TFAP2B:1.19538456012;MAFB:1.15658116466;EP300:1.15240387305;NR1H4:1.12801216718;FOXO1,3,4:1.10283342641;RXR{A,B,G}:1.09934904472;TGIF1:1.09086855356;TEAD1:1.08361456834;NKX2-1,4:1.081961956;MYBL2:1.07522031157;ZNF238:1.0718146417;TLX2:1.03460031528;HOX{A4,D4}:1.02988199628;MZF1:1.02698138335;ESRRA:1.0009985267;TBX4,5:0.996486879849;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.993233153204;GATA4:0.98493096602;ALX1:0.974209786966;HIC1:0.958897532428;GATA6:0.953233594468;ATF2:0.945456387186;ATF6:0.94518769095;HOX{A6,A7,B6,B7}:0.939168965466;PITX1..3:0.935106343858;RXRA_VDR{dimer}:0.898270147814;ZFP161:0.892902864149;TLX1..3_NFIC{dimer}:0.879074039459;PRDM1:0.853823693262;IRF7:0.846884569364;HES1:0.813839569892;GTF2A1,2:0.804440270207;MTF1:0.798585166787;GTF2I:0.795753686838;MTE{core}:0.769634883045;FOXD3:0.768092915214;HMGA1,2:0.742317825414;TFAP2{A,C}:0.741301067002;FOX{D1,D2}:0.73181716782;PAX1,9:0.720335798834;ATF4:0.689114816666;SPZ1:0.683675952099;GCM1,2:0.656977940815;TFAP4:0.614568948704;CUX2:0.612540603177;NR3C1:0.609769695377;GZF1:0.601838233083;SMAD1..7,9:0.578042858089;POU6F1:0.565320555932;GFI1B:0.560864428809;CDC5L:0.541493946376;NKX3-1:0.517005440887;CREB1:0.459747755734;MYFfamily:0.455006609872;DBP:0.427438540987;TFCP2:0.425787786043;CDX1,2,4:0.420484438104;ATF5_CREB3:0.388933817948;TEF:0.377531776497;XBP1:0.375008166665;IRF1,2:0.372513824117;BREu{core}:0.332208036318;FOX{I1,J2}:0.293606704137;XCPE1{core}:0.293301241573;RORA:0.293061481868;RREB1:0.287589235589;ETS1,2:0.277336735149;STAT1,3:0.261227275686;HAND1,2:0.254353980643;SP1:0.25411125215;PAX3,7:0.252083401372;STAT5{A,B}:0.181481480448;PAX4:0.175593825575;ZIC1..3:0.172709071004;NFIX:0.166658604677;NANOG:0.162885111325;FOXN1:0.151240914445;CEBPA,B_DDIT3:0.149749113273;JUN:0.143599572876;FOSL2:0.120850158771;NFE2L1:0.115872234707;FOXP3:0.0989549422055;NFKB1_REL_RELA:0.0818546115379;POU1F1:0.0810499598551;NR5A1,2:0.0796818520824;SOX{8,9,10}:0.0736101338649;NHLH1,2:0.0728597759711;NKX3-2:0.0723241211233;GLI1..3:0.0627227919859;ZNF384:0.0341819224069;TP53:0.0215647081377;SPI1:0.0134906421439;REST:-0.00872212260584;HOXA9_MEIS1:-0.0192469785765;FOXM1:-0.0275848686102;bHLH_family:-0.0622243609335;ELF1,2,4:-0.0639942066103;HNF1A:-0.0836390028016;NKX6-1,2:-0.0932617285761;SPIB:-0.123882803031;AIRE:-0.136629407161;TFDP1:-0.15633935493;TOPORS:-0.160136192314;EN1,2:-0.174982099951;AHR_ARNT_ARNT2:-0.17583728088;ADNP_IRX_SIX_ZHX:-0.176353003371;UFEwm:-0.192809479014;KLF4:-0.220688691968;PAX5:-0.23992153432;HMX1:-0.261827882096;NKX2-2,8:-0.276269815472;FOXA2:-0.277591693932;ARID5B:-0.277616769847;MYOD1:-0.297258775015;PDX1:-0.302519382743;ZNF423:-0.314643559817;SOX17:-0.323559189309;HLF:-0.353674544396;PBX1:-0.356483837434;LHX3,4:-0.369909299754;LEF1_TCF7_TCF7L1,2:-0.394630104869;NFE2:-0.402114900158;HOX{A5,B5}:-0.403740880448;LMO2:-0.415983986323;ESR1:-0.432808863752;NFIL3:-0.436286501566;PRRX1,2:-0.44597401389;HNF4A_NR2F1,2:-0.459905654727;DMAP1_NCOR{1,2}_SMARC:-0.475022207255;ZNF143:-0.480241861208;POU3F1..4:-0.484934547336;FOS_FOS{B,L1}_JUN{B,D}:-0.487479839058;HIF1A:-0.497413116797;FOXQ1:-0.512417387163;ALX4:-0.59468995526;BACH2:-0.601561687526;EBF1:-0.605459233268;ONECUT1,2:-0.627744414027;T:-0.680941849633;SOX2:-0.704355810228;NRF1:-0.817881901508;FOX{F1,F2,J1}:-0.823793774856;RFX2..5_RFXANK_RFXAP:-0.836295351274;PAX2:-0.844525892644;RFX1:-0.869786770222;NFE2L2:-0.881109429262;NR6A1:-0.914152229114;SNAI1..3:-0.931787254052;E2F1..5:-0.942084236687;SREBF1,2:-0.952644806795;ZNF148:-0.956491920531;CRX:-0.975802363688;NKX2-3_NKX2-5:-1.02230827725;RUNX1..3:-1.02257150505;ZEB1:-1.05407505446;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.08844652194;GFI1:-1.13417844518;PPARG:-1.16697731585;ZBTB6:-1.17791131301;MYB:-1.23014794784;POU5F1:-1.28254055039;VSX1,2:-1.29292651247;NFY{A,B,C}:-1.33943935324;POU2F1..3:-1.38106843027;TAL1_TCF{3,4,12}:-1.38797784972;NANOG{mouse}:-1.40827422572;OCT4_SOX2{dimer}:-1.45084612147;ELK1,4_GABP{A,B1}:-1.67451106582;PAX8:-1.80865868647;YY1:-1.83029264211 | |top_motifs=FOXP1:3.43064010307;FOXL1:3.04754859681;MEF2{A,B,C,D}:2.85607025581;BPTF:2.81994335688;AR:2.4935221358;STAT2,4,6:2.4098432849;ZBTB16:2.25928065342;NFATC1..3:2.00308248881;HBP1_HMGB_SSRP1_UBTF:1.97499441928;IKZF1:1.86829731063;SRF:1.75691625214;HSF1,2:1.68299909204;RBPJ:1.58640827378;EGR1..3:1.55345359046;MED-1{core}:1.54749120933;SOX5:1.43146818249;IKZF2:1.37814032634;MAZ:1.3611887823;TBP:1.35182988494;PATZ1:1.32052045467;EVI1:1.2330214813;PAX6:1.21483965475;TFAP2B:1.19538456012;MAFB:1.15658116466;EP300:1.15240387305;NR1H4:1.12801216718;FOXO1,3,4:1.10283342641;RXR{A,B,G}:1.09934904472;TGIF1:1.09086855356;TEAD1:1.08361456834;NKX2-1,4:1.081961956;MYBL2:1.07522031157;ZNF238:1.0718146417;TLX2:1.03460031528;HOX{A4,D4}:1.02988199628;MZF1:1.02698138335;ESRRA:1.0009985267;TBX4,5:0.996486879849;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.993233153204;GATA4:0.98493096602;ALX1:0.974209786966;HIC1:0.958897532428;GATA6:0.953233594468;ATF2:0.945456387186;ATF6:0.94518769095;HOX{A6,A7,B6,B7}:0.939168965466;PITX1..3:0.935106343858;RXRA_VDR{dimer}:0.898270147814;ZFP161:0.892902864149;TLX1..3_NFIC{dimer}:0.879074039459;PRDM1:0.853823693262;IRF7:0.846884569364;HES1:0.813839569892;GTF2A1,2:0.804440270207;MTF1:0.798585166787;GTF2I:0.795753686838;MTE{core}:0.769634883045;FOXD3:0.768092915214;HMGA1,2:0.742317825414;TFAP2{A,C}:0.741301067002;FOX{D1,D2}:0.73181716782;PAX1,9:0.720335798834;ATF4:0.689114816666;SPZ1:0.683675952099;GCM1,2:0.656977940815;TFAP4:0.614568948704;CUX2:0.612540603177;NR3C1:0.609769695377;GZF1:0.601838233083;SMAD1..7,9:0.578042858089;POU6F1:0.565320555932;GFI1B:0.560864428809;CDC5L:0.541493946376;NKX3-1:0.517005440887;CREB1:0.459747755734;MYFfamily:0.455006609872;DBP:0.427438540987;TFCP2:0.425787786043;CDX1,2,4:0.420484438104;ATF5_CREB3:0.388933817948;TEF:0.377531776497;XBP1:0.375008166665;IRF1,2:0.372513824117;BREu{core}:0.332208036318;FOX{I1,J2}:0.293606704137;XCPE1{core}:0.293301241573;RORA:0.293061481868;RREB1:0.287589235589;ETS1,2:0.277336735149;STAT1,3:0.261227275686;HAND1,2:0.254353980643;SP1:0.25411125215;PAX3,7:0.252083401372;STAT5{A,B}:0.181481480448;PAX4:0.175593825575;ZIC1..3:0.172709071004;NFIX:0.166658604677;NANOG:0.162885111325;FOXN1:0.151240914445;CEBPA,B_DDIT3:0.149749113273;JUN:0.143599572876;FOSL2:0.120850158771;NFE2L1:0.115872234707;FOXP3:0.0989549422055;NFKB1_REL_RELA:0.0818546115379;POU1F1:0.0810499598551;NR5A1,2:0.0796818520824;SOX{8,9,10}:0.0736101338649;NHLH1,2:0.0728597759711;NKX3-2:0.0723241211233;GLI1..3:0.0627227919859;ZNF384:0.0341819224069;TP53:0.0215647081377;SPI1:0.0134906421439;REST:-0.00872212260584;HOXA9_MEIS1:-0.0192469785765;FOXM1:-0.0275848686102;bHLH_family:-0.0622243609335;ELF1,2,4:-0.0639942066103;HNF1A:-0.0836390028016;NKX6-1,2:-0.0932617285761;SPIB:-0.123882803031;AIRE:-0.136629407161;TFDP1:-0.15633935493;TOPORS:-0.160136192314;EN1,2:-0.174982099951;AHR_ARNT_ARNT2:-0.17583728088;ADNP_IRX_SIX_ZHX:-0.176353003371;UFEwm:-0.192809479014;KLF4:-0.220688691968;PAX5:-0.23992153432;HMX1:-0.261827882096;NKX2-2,8:-0.276269815472;FOXA2:-0.277591693932;ARID5B:-0.277616769847;MYOD1:-0.297258775015;PDX1:-0.302519382743;ZNF423:-0.314643559817;SOX17:-0.323559189309;HLF:-0.353674544396;PBX1:-0.356483837434;LHX3,4:-0.369909299754;LEF1_TCF7_TCF7L1,2:-0.394630104869;NFE2:-0.402114900158;HOX{A5,B5}:-0.403740880448;LMO2:-0.415983986323;ESR1:-0.432808863752;NFIL3:-0.436286501566;PRRX1,2:-0.44597401389;HNF4A_NR2F1,2:-0.459905654727;DMAP1_NCOR{1,2}_SMARC:-0.475022207255;ZNF143:-0.480241861208;POU3F1..4:-0.484934547336;FOS_FOS{B,L1}_JUN{B,D}:-0.487479839058;HIF1A:-0.497413116797;FOXQ1:-0.512417387163;ALX4:-0.59468995526;BACH2:-0.601561687526;EBF1:-0.605459233268;ONECUT1,2:-0.627744414027;T:-0.680941849633;SOX2:-0.704355810228;NRF1:-0.817881901508;FOX{F1,F2,J1}:-0.823793774856;RFX2..5_RFXANK_RFXAP:-0.836295351274;PAX2:-0.844525892644;RFX1:-0.869786770222;NFE2L2:-0.881109429262;NR6A1:-0.914152229114;SNAI1..3:-0.931787254052;E2F1..5:-0.942084236687;SREBF1,2:-0.952644806795;ZNF148:-0.956491920531;CRX:-0.975802363688;NKX2-3_NKX2-5:-1.02230827725;RUNX1..3:-1.02257150505;ZEB1:-1.05407505446;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.08844652194;GFI1:-1.13417844518;PPARG:-1.16697731585;ZBTB6:-1.17791131301;MYB:-1.23014794784;POU5F1:-1.28254055039;VSX1,2:-1.29292651247;NFY{A,B,C}:-1.33943935324;POU2F1..3:-1.38106843027;TAL1_TCF{3,4,12}:-1.38797784972;NANOG{mouse}:-1.40827422572;OCT4_SOX2{dimer}:-1.45084612147;ELK1,4_GABP{A,B1}:-1.67451106582;PAX8:-1.80865868647;YY1:-1.83029264211 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10207-103F9;search_select_hide=table117:FF:10207-103F9 | |||
}} | }} | ||
Latest revision as of 13:56, 3 June 2020
| Name: | heart - tricuspid valve, adult |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12857 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12857
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12857
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.39 |
| 10 | 10 | 0.23 |
| 100 | 100 | 0.946 |
| 101 | 101 | 0.806 |
| 102 | 102 | 0.207 |
| 103 | 103 | 0.00856 |
| 104 | 104 | 0.465 |
| 105 | 105 | 0.379 |
| 106 | 106 | 0.155 |
| 107 | 107 | 0.043 |
| 108 | 108 | 0.0566 |
| 109 | 109 | 0.00601 |
| 11 | 11 | 0.216 |
| 110 | 110 | 0.185 |
| 111 | 111 | 0.732 |
| 112 | 112 | 0.542 |
| 113 | 113 | 0.0158 |
| 114 | 114 | 0.855 |
| 115 | 115 | 0.17 |
| 116 | 116 | 0.912 |
| 117 | 117 | 0.0331 |
| 118 | 118 | 0.0607 |
| 119 | 119 | 0.192 |
| 12 | 12 | 0.741 |
| 120 | 120 | 0.0853 |
| 121 | 121 | 0.256 |
| 122 | 122 | 0.194 |
| 123 | 123 | 0.035 |
| 124 | 124 | 0.461 |
| 125 | 125 | 0.609 |
| 126 | 126 | 0.998 |
| 127 | 127 | 0.0658 |
| 128 | 128 | 0.141 |
| 129 | 129 | 0.412 |
| 13 | 13 | 0.538 |
| 130 | 130 | 0.286 |
| 131 | 131 | 0.225 |
| 132 | 132 | 0.183 |
| 133 | 133 | 0.27 |
| 134 | 134 | 0.485 |
| 135 | 135 | 0.938 |
| 136 | 136 | 0.0308 |
| 137 | 137 | 0.396 |
| 138 | 138 | 0.724 |
| 139 | 139 | 0.127 |
| 14 | 14 | 0.76 |
| 140 | 140 | 0.0584 |
| 141 | 141 | 0.65 |
| 142 | 142 | 0.704 |
| 143 | 143 | 0.106 |
| 144 | 144 | 0.879 |
| 145 | 145 | 0.339 |
| 146 | 146 | 0.759 |
| 147 | 147 | 0.207 |
| 148 | 148 | 0.861 |
| 149 | 149 | 0.598 |
| 15 | 15 | 0.278 |
| 150 | 150 | 0.806 |
| 151 | 151 | 0.775 |
| 152 | 152 | 0.909 |
| 153 | 153 | 0.0479 |
| 154 | 154 | 0.782 |
| 155 | 155 | 0.363 |
| 156 | 156 | 0.463 |
| 157 | 157 | 0.406 |
| 158 | 158 | 0.294 |
| 159 | 159 | 0.4 |
| 16 | 16 | 0.0104 |
| 160 | 160 | 0.445 |
| 161 | 161 | 0.0558 |
| 162 | 162 | 0.946 |
| 163 | 163 | 0.87 |
| 164 | 164 | 0.478 |
| 165 | 165 | 0.0919 |
| 166 | 166 | 0.581 |
| 167 | 167 | 0.783 |
| 168 | 168 | 0.642 |
| 169 | 169 | 0.308 |
| 17 | 17 | 0.678 |
| 18 | 18 | 0.103 |
| 19 | 19 | 0.902 |
| 2 | 2 | 0.726 |
| 20 | 20 | 0.946 |
| 21 | 21 | 0.538 |
| 22 | 22 | 0.715 |
| 23 | 23 | 0.104 |
| 24 | 24 | 0.0154 |
| 25 | 25 | 0.116 |
| 26 | 26 | 0.721 |
| 27 | 27 | 0.0381 |
| 28 | 28 | 0.998 |
| 29 | 29 | 5.29635e-4 |
| 3 | 3 | 0.378 |
| 30 | 30 | 0.671 |
| 31 | 31 | 0.704 |
| 32 | 32 | 0.0161 |
| 33 | 33 | 0.129 |
| 34 | 34 | 0.365 |
| 35 | 35 | 0.859 |
| 36 | 36 | 0.18 |
| 37 | 37 | 0.249 |
| 38 | 38 | 0.66 |
| 39 | 39 | 0.0723 |
| 4 | 4 | 0.313 |
| 40 | 40 | 0.00583 |
| 41 | 41 | 0.414 |
| 42 | 42 | 0.759 |
| 43 | 43 | 0.579 |
| 44 | 44 | 0.196 |
| 45 | 45 | 0.79 |
| 46 | 46 | 0.633 |
| 47 | 47 | 0.0134 |
| 48 | 48 | 0.135 |
| 49 | 49 | 0.734 |
| 5 | 5 | 0.663 |
| 50 | 50 | 0.278 |
| 51 | 51 | 0.588 |
| 52 | 52 | 0.137 |
| 53 | 53 | 0.289 |
| 54 | 54 | 0.649 |
| 55 | 55 | 0.933 |
| 56 | 56 | 0.41 |
| 57 | 57 | 0.878 |
| 58 | 58 | 0.473 |
| 59 | 59 | 0.0889 |
| 6 | 6 | 0.289 |
| 60 | 60 | 0.468 |
| 61 | 61 | 0.11 |
| 62 | 62 | 0.464 |
| 63 | 63 | 0.471 |
| 64 | 64 | 0.148 |
| 65 | 65 | 0.645 |
| 66 | 66 | 0.0206 |
| 67 | 67 | 0.485 |
| 68 | 68 | 0.378 |
| 69 | 69 | 0.338 |
| 7 | 7 | 0.391 |
| 70 | 70 | 0.356 |
| 71 | 71 | 0.0875 |
| 72 | 72 | 0.709 |
| 73 | 73 | 0.361 |
| 74 | 74 | 0.73 |
| 75 | 75 | 0.0378 |
| 76 | 76 | 0.689 |
| 77 | 77 | 0.655 |
| 78 | 78 | 0.947 |
| 79 | 79 | 0.87 |
| 8 | 8 | 0.209 |
| 80 | 80 | 0.884 |
| 81 | 81 | 0.476 |
| 82 | 82 | 0.88 |
| 83 | 83 | 0.996 |
| 84 | 84 | 0.71 |
| 85 | 85 | 0.088 |
| 86 | 86 | 0.651 |
| 87 | 87 | 2.22422e-5 |
| 88 | 88 | 0.555 |
| 89 | 89 | 0.264 |
| 9 | 9 | 0.995 |
| 90 | 90 | 0.699 |
| 91 | 91 | 0.201 |
| 92 | 92 | 0.297 |
| 93 | 93 | 0.327 |
| 94 | 94 | 0.361 |
| 95 | 95 | 2.93808e-4 |
| 96 | 96 | 0.314 |
| 97 | 97 | 0.574 |
| 98 | 98 | 0.909 |
| 99 | 99 | 0.719 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12857
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010207 human heart, tricuspid valve - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002134 (tricuspid valve)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0010313 (neural crest-derived structure)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0003978 (valve)
0002081 (cardiac atrium)
0004151 (cardiac chamber)
0000946 (cardial valve)
0002133 (atrioventricular valve)
0005208 (right atrium valve)
0010317 (germ layer / neural crest derived structure)
0004145 (outflow tract)
0005946 (outflow tract of atrium)
0004535 (cardiovascular system)
0005965 (outflow part of right atrium)
0001009 (circulatory system)
0002078 (right cardiac atrium)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010207 (human heart, tricuspid valve - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006603 (presumptive mesoderm)
UBERON:0003104 (mesenchyme)
UBERON:0005062 (neural fold)
UBERON:0007284 (presumptive neural plate)
UBERON:0010316 (germ layer / neural crest)
