FF:10444-106F3: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (7 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|CNhs11248= | |CNhs11248= | ||
|DRA_sample_Accession=CAGE@SAMD00005163 | |DRA_sample_Accession=CAGE@SAMD00005163 | ||
|accession_numbers=CAGE;DRX007897;DRR008769;DRZ000194;DRZ001579!CAGE;DRX007898;DRR008770;DRZ000195;DRZ001580 | |HumanCAGEScanFiles=NCig10059;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/glioblastoma%2520cell%2520line%253aA172.NCig10059.10444-106F3.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/glioblastoma%2520cell%2520line%253aA172.NCig10059.10444-106F3.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/glioblastoma%2520cell%2520line%253aA172.NCig10059.10444-106F3.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/glioblastoma%2520cell%2520line%253aA172.NCig10059.10444-106F3.hg19.GCTATA.pairs.bed.gz | ||
|accession_numbers=CAGE;DRX007897;DRR008769;DRZ000194;DRZ001579;DRZ011544;DRZ012929!CAGE;DRX007898;DRR008770;DRZ000195;DRZ001580;DRZ011545;DRZ012930 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000955,UBERON:0004121,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0001017,UBERON:0001016 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000955,UBERON:0004121,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0001017,UBERON:0001016 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000095,CL:0000243,CL:0000125,CL:0000255 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000095,CL:0000243,CL:0000125,CL:0000255 | ||
| Line 42: | Line 43: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/glioblastoma%2520cell%2520line%253aA172%252c%2520tech_rep2.CNhs11248.10444-106F3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/glioblastoma%2520cell%2520line%253aA172%252c%2520tech_rep2.CNhs11248.10444-106F3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/glioblastoma%2520cell%2520line%253aA172%252c%2520tech_rep2.CNhs11248.10444-106F3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/glioblastoma%2520cell%2520line%253aA172%252c%2520tech_rep2.CNhs11248.10444-106F3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/glioblastoma%2520cell%2520line%253aA172%252c%2520tech_rep2.CNhs11248.10444-106F3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10444-106F3 | |id=FF:10444-106F3 | ||
|is_a=EFO:0002091;;FF:0000210;;FF:0100016 | |is_a=EFO:0002091;;FF:0000210;;FF:0100016 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11248 | |library_id=CNhs11248!CNhs11185 | ||
|library_id_phase_based=2:CNhs11248 | |library_id_phase_based=2:CNhs11248 | ||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10444 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10444 | |||
|name=glioblastoma cell line:A172 | |name=glioblastoma cell line:A172 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 54: | Line 64: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.0216030789840009,0,0.213551915039506,0,0,-0.117111872118384,0,-0.189206101350065,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0.063993701415957,0.483390479738179,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.152290603994904,0,0,0,0,0,0,0,0,0.0350510189794052,0,0,0,0,0,0.065794482596777,0.0432061579680018,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0184382055811747,0.0412500915278073,0,0,0,0,0.00767490382307046,0.0432061579680018,0,0,0,0.188393196305576,0.2284967981363,0,0.0825001830556145,0,0.353191640346941,-0.0548291932697047,-0.116874121816894,0,0,0,0.118532080184479,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0335204234106527,0.0432061579680018,0,0,-0.0530984638575231,-0.17132770826406,0,0,0,0,0,0 | |repeat_enrich_byfamily=0,0,0.0216030789840009,0,0.213551915039506,0,0,-0.117111872118384,0,-0.189206101350065,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0.063993701415957,0.483390479738179,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.152290603994904,0,0,0,0,0,0,0,0,0.0350510189794052,0,0,0,0,0,0.065794482596777,0.0432061579680018,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0184382055811747,0.0412500915278073,0,0,0,0,0.00767490382307046,0.0432061579680018,0,0,0,0.188393196305576,0.2284967981363,0,0.0825001830556145,0,0.353191640346941,-0.0548291932697047,-0.116874121816894,0,0,0,0.118532080184479,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0335204234106527,0.0432061579680018,0,0,-0.0530984638575231,-0.17132770826406,0,0,0,0,0,0 | ||
|repeat_enrich_byname=0,0,0,0,-0.0548291932697047,0,0.353191640346941,0.151802208584906,0,0.0825001830556145,0,0,0,0.0825001830556145,0,0,0.196592195639305,0.0592660400922395,0.435094911912006,-0.0610149594678574,0,0,0.345193981768887,0,0,0,0,0.0432061579680018,0,0.0432061579680018,0.0432061579680018,0,0.225071773394376,0,0.0681195285951641,0,0,0,0,0.120197117842589,0.184775249990577,0,-0.0301976832622671,-0.0251381031093664,0,0,0,0,0.0514981482384834,0,-0.0776733258257389,-0.0827201683234173,0.0424556664568762,-0.266450048371738,0.0267876862744326,0,0,0,-0.47880338016716,-0.0185594096830227,0,0,-0.100176772767873,0.0621389958857765,0,0,-0.391044581551635,0,-0.356007026544581,0.0698303226948037,0,0.0652324005467585,0,0,0.0432061579680018,0,0,0,0,0,0.0825001830556145,0,0,-0.0358903878374357,0.0827827251475278,0,0.0432061579680018,0.151802208584906,0,0.227292059015012,0.0432061579680018,0.0373054650788971,-0.290785972900952,0.0184887792896246,0.181677223326039,0.126998991099773,0.00252630038304782,0.0704922795405045,-0.038212189856532,0.113848162173917,-0.137874703678767,-0.147401849371139,0.0486213100467051,0.058950049822244,0.0157978144844607,0.170587966776234,0.231344085278818,-0.010901174959278,0.120178399833037,0.109443320007791,0.316732391905209,0,0.0432061579680018,0.0212768103507592,-0.0332876349688779,0,0.0621607570518241,0.000132766412210938,0.0461239604398637,-0.0381506343800856,-0.0473920016933843,0.200341540846695,0.121012427447513,-0.0395325284566706,-0.0476651310700981,0.100516131620047,0.291707928015539,0.00767490382307046,0,0,0.0363564676445133,0.288856661490007,0.0118149466158918,0.0432061579680018,-0.483977461810981,-0.0683442610773682,0.0216030789840009,-0.340921017362894,-0.0946811513296424,0.0432061579680018,0,-0.118954999195675,0,0,0.161351775597662,0,0.0432061579680018,0.149521599851628,-0.251371387255681,0.00574746804100762,0,-0.146967406000462,0.0216030789840009,0.226487309214416,0,0.107869448829172,0.214557022986365,-0.0340068978016094,-0.111759575929097,0,-0.125044593383857,0.00916003673363475,-0.044556408880931,0.413787438304599,0.713605840419913,-0.320700611949234,-0.0398922666125153,0.188393196305576,0.667656183671908,0,0.402120648413697,0,0.431697701626264,-0.085229400809097,0.00250382133755456,-0.0215854552954665,0.0432061579680018,0.153533110494419,0,-0.0437796617096975,0,0.213515449662438,-0.54043375147324,-0.175222120021003,-0.101858114228558,0.0240929622179001,-0.238909496438742,-0.29788345688499,0,0.200596874515764,0,0.211552238067171,0.00143512525026659,0.145060648622843,-0.190047348880588,0.104499157767241,0,0.00441780900483701,0,0,-0.100109337675397,-0.0239237996972173,0,0.0314492031763138,0.0184382055811747,0.0234250785992763,-0.0727649154669323,0,0,-0.357579582218239,0,0,0.0527030033701028,0.185077429690516,0.754943355343169,0.0575853295762955,0.0432061579680018,0.0576601725870265,0,0,-0.0950275829095611,0.0432061579680018,0.113293298063782,0,0.0432061579680018,0.0607804833480102,0,0,0.0216030789840009,0.238603029596552,0.0216030789840009,0.0432061579680018,-0.0157503530173544,0,0,0,0,0.0432061579680018,-0.0597612673753267,0.177394158717733,0,0.12638427014222,0,0,0,0,0,0,0,0.931020555792757,0.543674279581808,0.0186866978067187,-0.12301741567642,0.0592660400922395,0,0,0,-0.13322321949786,0.0353664675018286,0,0.0199395020872742,0,0.0216030789840009,0.118532080184479,0,0.0965629717607663,0,0,0,0.075901104292453,-0.0145242990856622,-0.0743945462531388,0,0,0,-0.27695440160179,0,0,0,0.0086395420633454,0.0338865309807601,0,0.0538911130477687,0.0432061579680018,0,-0.0573146363508392,0.2716097608001,0.0083546933475575,-0.0127498906301336,0.178954902041748,0.622973663659653,0,0,0.321202192782583,0,0.0432061579680018,0.23780870298739,0,0.0432061579680018,0.0203253155816903,0,0,0,0,0.211552238067171,0,-0.0957824322152766,0.0432061579680018,0,0,0,0,0.0825001830556145,0,0,0,0,0,-0.0611729891169803,0.0595781519263955,0,0,0,0,0,0,0,-0.0241060230789031,-0.105918687414882,0.0216030789840009,0,0,0,0,0,0,0,0.122842791149185,0,0,0,0,0,-0.0969923612426051,0,0.0432061579680018,0,0.0432061579680018,-0.564807121153884,0,0,0.0107586235809714,0,0.0392884761865658,0,0,0,0,0,0,0,0,0,0,0,0.0593848755145299,-0.189206101350065,0,0.0432061579680018,0,0,0,0,0,-0.231627140238089,0,0,0,0,-0.0706782157409754,0.427103830079012,0,0,0.0779075767608212,0,-0.117111872118384,0,0,0,0,0,0.0432061579680018,0.0412500915278073,0.0216030789840009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535510337801671,0,-0.104503554422932,0.043128935258242,0,0,0.0197198552802358,0,0,0,0,0,0,0.0445606802639259,0,0,0,0,0,0,0,0.0216030789840009,0,0,0,0,0,0,0,0,0,0,0.0432061579680018,0,0,0,0,0,0.091351980774989,0.0389411730946893,0,0,0,0,0.459822231675737,0,0,-0.0979578962680575,0,0,-0.0704297308165253,0,0.00333849716269018,0,0.0144774565047815,0,0,0.0606067921723165,0.840402127962742,0.1212400664085,0,0,0,-0.0131354809546477,0,0,0.0769427226637887,0.0432061579680018,0.0850248211660046,0,0,0,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0,0,0,0.0432061579680018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0,0,0,0,0.0412500915278073,0,0.0592660400922395,0,0,0,0,0,0,0.0412500915278073,0,0,0,0,0,0,0,0,0,0,0,0.0432061579680018,0,0,0,0.098022264004425,0.211552238067171,0,0.118532080184479,0,0,0,0,0.118532080184479,0,0,0,0,0,0,0,0,0.0432061579680018,0,0,0,0,0,-0.0800184682686384,0,0,0,0.262215008823201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0825001830556145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.117308111175909,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,-0.0411704742620254,0,0,0,0,0,0,0,0,0,0.0432061579680018,0,0,0,0,0,0.288120755774485,-0.468003859460098,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,0.0183476212317326,0,0,0.0825001830556145,0,0,0,0,0,0,0,0,0,0,-0.171110425232891,0,0,-0.274822320754953,0,0.0432061579680018,0,0,0,0,0,0,0,0,0.0365712358164816,0,0.0572119010343526,0,0,0,0,0,0,0,0,0,0,0.0701020379588103,0,0,0,0,0,0,0,0,0.211552238067171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0598059666632653,-0.17132770826406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0.0412500915278073,0.752412584500739,0,0,0,0,0,0,0,0,0,0,0,0,-0.00181312326652433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0.0115531691551315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0.0268106583394921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0592660400922395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966780959476357,0,0,0,0,0.443771070924869,0,0,0,0,0,0,0,0.0432061579680018,0,0,0,0,0,0.127987402831914,0,0,0,0,0,0,0,0,0.264067254559683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0441411718978029,0,0,0,0,0,0,0,0,0,0,0,0.0825001830556145,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.14954102987692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0,0,0,0,0,0,0,0.075901104292453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0017805787549815,0,0,0,0,0,0,0,0.165424758777485,0,0,0,0.0216030789840009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0955617312807145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0441845182440697,0,0,0.372882006550418,0,0,0,0,0,0,0.787144342542686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105776119033585,0,0,0,-0.0797419986649781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.097343627213097,0,0.0592660400922395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238603029596552,0,0,0,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0412500915278073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0093280575706531,0.0216030789840009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0,0,0,0,0,0,0,0,-0.282605174369094,0,0.0216030789840009,0.140416493072862,0,-0.0479242454616798,0.0323970718997283,0,0,0,0,0,0.0152052783783281,0,0,0,0,0,0,0,0.582152183694415,0,0,0.00312991024347021,0,0,0.0597895973846802,0,0,0,0,0,0,0.0825001830556145,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0,0,0,0,0,0.0308395757400853,0,-0.0391314215868488,0.0300291415569975,0,0,-0.290357550765998,0,0,-0.0367311208382308,0,0,-0.174992895090299,0.105944709636311,0.182703961549978,0,0,0,0.288120755774485,0,0.448917637478908,0,0,0,0,0,0,0,0.0846127101203785,0.0825001830556145,0.0825001830556145,0.0432061579680018,-0.0568589461625992,-0.269475635594569,0,0.179280595866392,0,0,0.00208672271277432,0,0.0216030789840009,0,-0.0134592243179723 | |repeat_enrich_byname=0,0,0,0,-0.0548291932697047,0,0.353191640346941,0.151802208584906,0,0.0825001830556145,0,0,0,0.0825001830556145,0,0,0.196592195639305,0.0592660400922395,0.435094911912006,-0.0610149594678574,0,0,0.345193981768887,0,0,0,0,0.0432061579680018,0,0.0432061579680018,0.0432061579680018,0,0.225071773394376,0,0.0681195285951641,0,0,0,0,0.120197117842589,0.184775249990577,0,-0.0301976832622671,-0.0251381031093664,0,0,0,0,0.0514981482384834,0,-0.0776733258257389,-0.0827201683234173,0.0424556664568762,-0.266450048371738,0.0267876862744326,0,0,0,-0.47880338016716,-0.0185594096830227,0,0,-0.100176772767873,0.0621389958857765,0,0,-0.391044581551635,0,-0.356007026544581,0.0698303226948037,0,0.0652324005467585,0,0,0.0432061579680018,0,0,0,0,0,0.0825001830556145,0,0,-0.0358903878374357,0.0827827251475278,0,0.0432061579680018,0.151802208584906,0,0.227292059015012,0.0432061579680018,0.0373054650788971,-0.290785972900952,0.0184887792896246,0.181677223326039,0.126998991099773,0.00252630038304782,0.0704922795405045,-0.038212189856532,0.113848162173917,-0.137874703678767,-0.147401849371139,0.0486213100467051,0.058950049822244,0.0157978144844607,0.170587966776234,0.231344085278818,-0.010901174959278,0.120178399833037,0.109443320007791,0.316732391905209,0,0.0432061579680018,0.0212768103507592,-0.0332876349688779,0,0.0621607570518241,0.000132766412210938,0.0461239604398637,-0.0381506343800856,-0.0473920016933843,0.200341540846695,0.121012427447513,-0.0395325284566706,-0.0476651310700981,0.100516131620047,0.291707928015539,0.00767490382307046,0,0,0.0363564676445133,0.288856661490007,0.0118149466158918,0.0432061579680018,-0.483977461810981,-0.0683442610773682,0.0216030789840009,-0.340921017362894,-0.0946811513296424,0.0432061579680018,0,-0.118954999195675,0,0,0.161351775597662,0,0.0432061579680018,0.149521599851628,-0.251371387255681,0.00574746804100762,0,-0.146967406000462,0.0216030789840009,0.226487309214416,0,0.107869448829172,0.214557022986365,-0.0340068978016094,-0.111759575929097,0,-0.125044593383857,0.00916003673363475,-0.044556408880931,0.413787438304599,0.713605840419913,-0.320700611949234,-0.0398922666125153,0.188393196305576,0.667656183671908,0,0.402120648413697,0,0.431697701626264,-0.085229400809097,0.00250382133755456,-0.0215854552954665,0.0432061579680018,0.153533110494419,0,-0.0437796617096975,0,0.213515449662438,-0.54043375147324,-0.175222120021003,-0.101858114228558,0.0240929622179001,-0.238909496438742,-0.29788345688499,0,0.200596874515764,0,0.211552238067171,0.00143512525026659,0.145060648622843,-0.190047348880588,0.104499157767241,0,0.00441780900483701,0,0,-0.100109337675397,-0.0239237996972173,0,0.0314492031763138,0.0184382055811747,0.0234250785992763,-0.0727649154669323,0,0,-0.357579582218239,0,0,0.0527030033701028,0.185077429690516,0.754943355343169,0.0575853295762955,0.0432061579680018,0.0576601725870265,0,0,-0.0950275829095611,0.0432061579680018,0.113293298063782,0,0.0432061579680018,0.0607804833480102,0,0,0.0216030789840009,0.238603029596552,0.0216030789840009,0.0432061579680018,-0.0157503530173544,0,0,0,0,0.0432061579680018,-0.0597612673753267,0.177394158717733,0,0.12638427014222,0,0,0,0,0,0,0,0.931020555792757,0.543674279581808,0.0186866978067187,-0.12301741567642,0.0592660400922395,0,0,0,-0.13322321949786,0.0353664675018286,0,0.0199395020872742,0,0.0216030789840009,0.118532080184479,0,0.0965629717607663,0,0,0,0.075901104292453,-0.0145242990856622,-0.0743945462531388,0,0,0,-0.27695440160179,0,0,0,0.0086395420633454,0.0338865309807601,0,0.0538911130477687,0.0432061579680018,0,-0.0573146363508392,0.2716097608001,0.0083546933475575,-0.0127498906301336,0.178954902041748,0.622973663659653,0,0,0.321202192782583,0,0.0432061579680018,0.23780870298739,0,0.0432061579680018,0.0203253155816903,0,0,0,0,0.211552238067171,0,-0.0957824322152766,0.0432061579680018,0,0,0,0,0.0825001830556145,0,0,0,0,0,-0.0611729891169803,0.0595781519263955,0,0,0,0,0,0,0,-0.0241060230789031,-0.105918687414882,0.0216030789840009,0,0,0,0,0,0,0,0.122842791149185,0,0,0,0,0,-0.0969923612426051,0,0.0432061579680018,0,0.0432061579680018,-0.564807121153884,0,0,0.0107586235809714,0,0.0392884761865658,0,0,0,0,0,0,0,0,0,0,0,0.0593848755145299,-0.189206101350065,0,0.0432061579680018,0,0,0,0,0,-0.231627140238089,0,0,0,0,-0.0706782157409754,0.427103830079012,0,0,0.0779075767608212,0,-0.117111872118384,0,0,0,0,0,0.0432061579680018,0.0412500915278073,0.0216030789840009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535510337801671,0,-0.104503554422932,0.043128935258242,0,0,0.0197198552802358,0,0,0,0,0,0,0.0445606802639259,0,0,0,0,0,0,0,0.0216030789840009,0,0,0,0,0,0,0,0,0,0,0.0432061579680018,0,0,0,0,0,0.091351980774989,0.0389411730946893,0,0,0,0,0.459822231675737,0,0,-0.0979578962680575,0,0,-0.0704297308165253,0,0.00333849716269018,0,0.0144774565047815,0,0,0.0606067921723165,0.840402127962742,0.1212400664085,0,0,0,-0.0131354809546477,0,0,0.0769427226637887,0.0432061579680018,0.0850248211660046,0,0,0,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0,0,0,0.0432061579680018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0,0,0,0,0.0412500915278073,0,0.0592660400922395,0,0,0,0,0,0,0.0412500915278073,0,0,0,0,0,0,0,0,0,0,0,0.0432061579680018,0,0,0,0.098022264004425,0.211552238067171,0,0.118532080184479,0,0,0,0,0.118532080184479,0,0,0,0,0,0,0,0,0.0432061579680018,0,0,0,0,0,-0.0800184682686384,0,0,0,0.262215008823201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0825001830556145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.117308111175909,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,-0.0411704742620254,0,0,0,0,0,0,0,0,0,0.0432061579680018,0,0,0,0,0,0.288120755774485,-0.468003859460098,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,0.0183476212317326,0,0,0.0825001830556145,0,0,0,0,0,0,0,0,0,0,-0.171110425232891,0,0,-0.274822320754953,0,0.0432061579680018,0,0,0,0,0,0,0,0,0.0365712358164816,0,0.0572119010343526,0,0,0,0,0,0,0,0,0,0,0.0701020379588103,0,0,0,0,0,0,0,0,0.211552238067171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0598059666632653,-0.17132770826406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0.0412500915278073,0.752412584500739,0,0,0,0,0,0,0,0,0,0,0,0,-0.00181312326652433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0.0115531691551315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0.0268106583394921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0592660400922395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966780959476357,0,0,0,0,0.443771070924869,0,0,0,0,0,0,0,0.0432061579680018,0,0,0,0,0,0.127987402831914,0,0,0,0,0,0,0,0,0.264067254559683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0441411718978029,0,0,0,0,0,0,0,0,0,0,0,0.0825001830556145,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.14954102987692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0,0,0,0,0,0,0,0.075901104292453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0017805787549815,0,0,0,0,0,0,0,0.165424758777485,0,0,0,0.0216030789840009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0955617312807145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0441845182440697,0,0,0.372882006550418,0,0,0,0,0,0,0.787144342542686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105776119033585,0,0,0,-0.0797419986649781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.097343627213097,0,0.0592660400922395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238603029596552,0,0,0,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0412500915278073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0093280575706531,0.0216030789840009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0,0,0,0,0,0,0,0,-0.282605174369094,0,0.0216030789840009,0.140416493072862,0,-0.0479242454616798,0.0323970718997283,0,0,0,0,0,0.0152052783783281,0,0,0,0,0,0,0,0.582152183694415,0,0,0.00312991024347021,0,0,0.0597895973846802,0,0,0,0,0,0,0.0825001830556145,0,0,0,0,0,0,0,0,0.0216030789840009,0,0,0,0,0,0,0,0.0308395757400853,0,-0.0391314215868488,0.0300291415569975,0,0,-0.290357550765998,0,0,-0.0367311208382308,0,0,-0.174992895090299,0.105944709636311,0.182703961549978,0,0,0,0.288120755774485,0,0.448917637478908,0,0,0,0,0,0,0,0.0846127101203785,0.0825001830556145,0.0825001830556145,0.0432061579680018,-0.0568589461625992,-0.269475635594569,0,0.179280595866392,0,0,0.00208672271277432,0,0.0216030789840009,0,-0.0134592243179723 | ||
| Line 91: | Line 102: | ||
|top_motifs=HOXA9_MEIS1:2.0308510814;TFDP1:1.44560807399;ZNF384:1.36614042134;POU3F1..4:1.25559179789;GFI1:1.09541412181;EN1,2:1.07886127724;E2F1..5:0.967869148778;ADNP_IRX_SIX_ZHX:0.952054189441;PRRX1,2:0.931765634854;ZIC1..3:0.922927369268;PITX1..3:0.888587914613;XCPE1{core}:0.881394195531;NKX3-1:0.868990008005;TLX1..3_NFIC{dimer}:0.802716541321;NRF1:0.7910783973;ZNF143:0.768209080049;NR3C1:0.754449678431;FOXD3:0.751589364447;ARID5B:0.715545644575;NKX6-1,2:0.660975253586;TEAD1:0.65553060343;NFY{A,B,C}:0.650179334209;SOX2:0.609913936407;PDX1:0.609425933543;NKX2-3_NKX2-5:0.594701126518;STAT5{A,B}:0.593419573554;RXRA_VDR{dimer}:0.590701989259;ZNF238:0.568399161521;EGR1..3:0.564417093265;HBP1_HMGB_SSRP1_UBTF:0.549603889316;SOX17:0.542425314538;MZF1:0.541425590102;PAX8:0.535867777999;AIRE:0.531134701026;GTF2A1,2:0.519452463096;PAX4:0.511173887506;GTF2I:0.495718733122;ZNF148:0.489063498472;FOXP1:0.483187887044;ELK1,4_GABP{A,B1}:0.461008643907;RFX1:0.453804666063;NFE2:0.438699540418;ALX4:0.435261396517;TLX2:0.422536756978;FOXM1:0.411709208258;OCT4_SOX2{dimer}:0.409684461156;NFE2L2:0.405630186171;EBF1:0.396847707841;ONECUT1,2:0.396174585578;BACH2:0.38565888224;GFI1B:0.37001753252;EVI1:0.34819202133;TP53:0.343779734831;ZBTB6:0.333979081191;CUX2:0.332363152851;TFAP2{A,C}:0.331354913544;TAL1_TCF{3,4,12}:0.318217691099;MYBL2:0.316271498654;NR1H4:0.310933755309;PBX1:0.310745004025;TFAP2B:0.257119779175;POU2F1..3:0.246612876637;PATZ1:0.246514686035;HIC1:0.245112576757;FOS_FOS{B,L1}_JUN{B,D}:0.228858462175;HOX{A5,B5}:0.21348235133;HSF1,2:0.206959074936;LEF1_TCF7_TCF7L1,2:0.199174380805;SP1:0.192825354775;CRX:0.185901023484;RREB1:0.181220641838;NANOG:0.180211535044;STAT1,3:0.175744416685;KLF4:0.164338893035;CDC5L:0.148642986637;PRDM1:0.140617159071;PAX5:0.130611199099;NFIX:0.125199881823;IKZF1:0.120197503694;HOX{A6,A7,B6,B7}:0.11363439129;RBPJ:0.1093573636;bHLH_family:0.108706916478;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.103776825436;TEF:0.1000939963;POU5F1:0.085957420229;LHX3,4:0.0812181152581;MYB:0.0728936171304;FOXQ1:0.0677384756117;FOSL2:0.0644909283157;EP300:0.0635807305397;FOX{I1,J2}:0.0556109948412;TBX4,5:0.0496294956253;GCM1,2:0.0252935781697;YY1:0.00785358288823;GATA4:-0.0144103114764;MEF2{A,B,C,D}:-0.0150541943603;MAZ:-0.0153335901001;CDX1,2,4:-0.0170800475802;ZFP161:-0.0191598101563;FOX{F1,F2,J1}:-0.033116065773;RXR{A,B,G}:-0.0635582853244;MTE{core}:-0.0734782786996;FOXA2:-0.0847933466878;POU1F1:-0.0961003282527;MYOD1:-0.0967704082586;NKX3-2:-0.112012812012;HNF1A:-0.118257621388;BREu{core}:-0.125436066833;PAX1,9:-0.131211589904;IRF1,2:-0.132238232741;PPARG:-0.132910553981;ELF1,2,4:-0.133399763355;IRF7:-0.140218263089;IKZF2:-0.142101911517;MED-1{core}:-0.157008827783;STAT2,4,6:-0.158073854574;NFATC1..3:-0.15962008775;DBP:-0.180337332654;SMAD1..7,9:-0.182834495893;RUNX1..3:-0.192969036119;TOPORS:-0.192987222319;NR6A1:-0.193243903967;TFCP2:-0.196320218433;DMAP1_NCOR{1,2}_SMARC:-0.20864539805;SREBF1,2:-0.213257344232;HLF:-0.216669229126;SOX{8,9,10}:-0.228112327822;ZBTB16:-0.232189307755;MYFfamily:-0.246464780575;GATA6:-0.247218309394;HOX{A4,D4}:-0.251881268046;HNF4A_NR2F1,2:-0.261781049149;PAX3,7:-0.263409909553;UFEwm:-0.265190863809;RORA:-0.271571748854;SRF:-0.277683006477;NFKB1_REL_RELA:-0.278765054559;ATF2:-0.281229261349;LMO2:-0.292335370856;ETS1,2:-0.299320028685;RFX2..5_RFXANK_RFXAP:-0.303726459801;PAX6:-0.31372852823;XBP1:-0.327174131894;FOXO1,3,4:-0.349288712364;FOXN1:-0.358508783565;SNAI1..3:-0.387231895152;REST:-0.40319522783;CEBPA,B_DDIT3:-0.405816071365;CREB1:-0.413296228401;GZF1:-0.419899109939;SPIB:-0.422731285586;VSX1,2:-0.42318298893;HMGA1,2:-0.45578221579;JUN:-0.464680084453;FOXP3:-0.492596705842;TGIF1:-0.496466722919;ATF5_CREB3:-0.504491830844;ALX1:-0.52129987078;TFAP4:-0.52503641612;SPI1:-0.529304045129;NR5A1,2:-0.586895590424;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.595174465073;ESRRA:-0.596713503804;NKX2-2,8:-0.59766547025;ATF4:-0.603733081887;SOX5:-0.6154507639;NFIL3:-0.616672524116;POU6F1:-0.621474689629;FOX{D1,D2}:-0.624958182379;NFE2L1:-0.658373806944;HAND1,2:-0.660697170104;BPTF:-0.666705976034;FOXL1:-0.706653019182;T:-0.712345062373;SPZ1:-0.715503908595;AHR_ARNT_ARNT2:-0.74944265521;ZNF423:-0.749966252093;HES1:-0.758936245558;NHLH1,2:-0.759679488131;NKX2-1,4:-0.787933336538;PAX2:-0.796134735369;HMX1:-0.842171053837;ZEB1:-0.920020065438;MAFB:-0.949567198456;GLI1..3:-0.973031800126;NANOG{mouse}:-0.974287181741;ATF6:-1.00971840022;MTF1:-1.01441224337;TBP:-1.02453780208;AR:-1.17451334092;ESR1:-1.23409759281;HIF1A:-1.44653644786HOXA9_MEIS1:1.56891988048;ZNF384:1.50429374809;TFDP1:1.48315412703;POU3F1..4:1.28353871852;FOXD3:1.15739213951;GFI1:1.09682925119;ZIC1..3:1.00548160803;PRRX1,2:0.987949829276;XCPE1{core}:0.946020048246;ADNP_IRX_SIX_ZHX:0.916756218003;E2F1..5:0.912049446247;NKX2-3_NKX2-5:0.897542744393;NKX6-1,2:0.869410711027;NR3C1:0.861893142482;ZNF143:0.838769432062;EN1,2:0.833327232514;NRF1:0.817646622573;PITX1..3:0.80014656972;EVI1:0.782884243858;TLX1..3_NFIC{dimer}:0.760301678428;PAX4:0.727914137584;ARID5B:0.726601756758;STAT5{A,B}:0.724040308376;NFY{A,B,C}:0.708599381552;NKX3-1:0.704302365479;TEAD1:0.682307687602;FOXM1:0.668689159644;HBP1_HMGB_SSRP1_UBTF:0.650089253339;OCT4_SOX2{dimer}:0.554838880731;EGR1..3:0.543722264576;ALX4:0.54301582737;SOX2:0.537297085458;SOX17:0.529742096863;ELK1,4_GABP{A,B1}:0.524237296128;AIRE:0.4922945392;MZF1:0.467499332397;RFX1:0.464430303252;ZNF148:0.456877837395;GTF2I:0.439649537783;GTF2A1,2:0.433937649855;TLX2:0.430857691968;HOX{A6,A7,B6,B7}:0.423264982165;GFI1B:0.409704372625;PDX1:0.403395697911;ONECUT1,2:0.403311650471;MYBL2:0.40138079277;TEF:0.395779604734;TFAP2{A,C}:0.395212660146;TAL1_TCF{3,4,12}:0.392795959431;ZNF238:0.387396615103;NFE2:0.375837715522;HOX{A5,B5}:0.365501924496;NFIX:0.364927391797;BACH2:0.353355051367;NFE2L2:0.347210665671;FOXQ1:0.346445790501;PBX1:0.343020842105;IKZF2:0.334434171323;LHX3,4:0.300315595916;KLF4:0.294401232163;SP1:0.29234147276;GATA4:0.29126086062;EBF1:0.289518596668;TP53:0.284037939544;RBPJ:0.279940551118;HIC1:0.26694633634;RXRA_VDR{dimer}:0.256985529281;TFAP2B:0.252086297802;HSF1,2:0.241762064107;CDX1,2,4:0.224294686574;PRDM1:0.223697517975;CUX2:0.220153261232;PAX8:0.215699228713;STAT1,3:0.208315610608;FOS_FOS{B,L1}_JUN{B,D}:0.199582572243;LEF1_TCF7_TCF7L1,2:0.173709422215;FOX{F1,F2,J1}:0.172074405678;PATZ1:0.171400607961;CRX:0.156051289983;POU2F1..3:0.135119918285;ZBTB6:0.126281320493;RREB1:0.115636995867;FOXP1:0.107248936749;ZFP161:0.0962191048444;NR1H4:0.0898864719947;DBP:0.076687927317;HMGA1,2:0.0702330893517;POU5F1:0.0700515352699;PPARG:0.0644075938692;GCM1,2:0.054776104111;FOX{I1,J2}:0.0529976597621;MEF2{A,B,C,D}:0.0324850790642;MYB:0.0279756868478;FOXA2:0.0226085639019;NANOG:0.0210490830619;bHLH_family:0.0169237731466;PAX5:0.0165510444121;ZBTB16:0.00969705596414;FOSL2:0.000419134560721;CDC5L:-0.003791170842;PAX6:-0.016037677669;MAZ:-0.0291300535691;PAX3,7:-0.036916662813;IRF7:-0.0547088789851;POU1F1:-0.0573929669937;HNF1A:-0.0612811437156;MED-1{core}:-0.0621975045573;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.0654864281347;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0744799394941;MTE{core}:-0.0835281754505;YY1:-0.096011907499;IRF1,2:-0.0965854553695;NFATC1..3:-0.131682678989;RXR{A,B,G}:-0.140749958487;BREu{core}:-0.169341066623;RUNX1..3:-0.174194242764;EP300:-0.179671100097;DMAP1_NCOR{1,2}_SMARC:-0.179753538878;ELF1,2,4:-0.182568858764;PAX1,9:-0.187757660664;STAT2,4,6:-0.204777133229;NKX3-2:-0.210036102811;FOXO1,3,4:-0.217311066637;HOX{A4,D4}:-0.217843938571;BPTF:-0.218574937013;TFCP2:-0.223777731752;FOXN1:-0.224914110654;HNF4A_NR2F1,2:-0.226866237077;SMAD1..7,9:-0.228302755109;UFEwm:-0.242797136038;IKZF1:-0.243773743414;SOX{8,9,10}:-0.247985797887;HLF:-0.251087879993;GATA6:-0.252600918913;SRF:-0.267698329311;MYFfamily:-0.278950239244;LMO2:-0.28492400918;MYOD1:-0.295078764939;SREBF1,2:-0.295376442915;NFKB1_REL_RELA:-0.298840253187;VSX1,2:-0.319010117347;TBX4,5:-0.3195608387;POU6F1:-0.323295326704;RORA:-0.326324102292;T:-0.337013705788;ETS1,2:-0.341808504568;NR6A1:-0.346700623035;XBP1:-0.347971395184;SNAI1..3:-0.381954753957;CEBPA,B_DDIT3:-0.384772828434;SOX5:-0.386033407687;ATF2:-0.417313391185;TGIF1:-0.43231836085;SPIB:-0.435029987979;FOXP3:-0.445680947049;REST:-0.450385534166;FOXL1:-0.463835183603;SPI1:-0.491033514912;ATF4:-0.491639242431;GZF1:-0.504421677372;ATF5_CREB3:-0.512056098113;TOPORS:-0.523925803734;JUN:-0.539785820423;TFAP4:-0.546592761034;RFX2..5_RFXANK_RFXAP:-0.563323257556;NKX2-1,4:-0.584514308746;NFIL3:-0.587545586975;CREB1:-0.598143438596;ESRRA:-0.646185228617;ZNF423:-0.68744848675;ALX1:-0.699007194503;SPZ1:-0.699294522183;GLI1..3:-0.710422105591;PAX2:-0.713463081882;HAND1,2:-0.714351002054;NR5A1,2:-0.718276199324;NFE2L1:-0.726355184719;NHLH1,2:-0.740298406838;FOX{D1,D2}:-0.806806231106;AHR_ARNT_ARNT2:-0.807773028169;HES1:-0.843751799549;MTF1:-0.857129175993;NKX2-2,8:-0.871206911279;HMX1:-0.871478569741;ZEB1:-0.890338797116;ATF6:-1.00401389868;MAFB:-1.06034076665;TBP:-1.07851206176;AR:-1.09445392476;NANOG{mouse}:-1.10226740796;ESR1:-1.20572312277;HIF1A:-1.34887487836 | |top_motifs=HOXA9_MEIS1:2.0308510814;TFDP1:1.44560807399;ZNF384:1.36614042134;POU3F1..4:1.25559179789;GFI1:1.09541412181;EN1,2:1.07886127724;E2F1..5:0.967869148778;ADNP_IRX_SIX_ZHX:0.952054189441;PRRX1,2:0.931765634854;ZIC1..3:0.922927369268;PITX1..3:0.888587914613;XCPE1{core}:0.881394195531;NKX3-1:0.868990008005;TLX1..3_NFIC{dimer}:0.802716541321;NRF1:0.7910783973;ZNF143:0.768209080049;NR3C1:0.754449678431;FOXD3:0.751589364447;ARID5B:0.715545644575;NKX6-1,2:0.660975253586;TEAD1:0.65553060343;NFY{A,B,C}:0.650179334209;SOX2:0.609913936407;PDX1:0.609425933543;NKX2-3_NKX2-5:0.594701126518;STAT5{A,B}:0.593419573554;RXRA_VDR{dimer}:0.590701989259;ZNF238:0.568399161521;EGR1..3:0.564417093265;HBP1_HMGB_SSRP1_UBTF:0.549603889316;SOX17:0.542425314538;MZF1:0.541425590102;PAX8:0.535867777999;AIRE:0.531134701026;GTF2A1,2:0.519452463096;PAX4:0.511173887506;GTF2I:0.495718733122;ZNF148:0.489063498472;FOXP1:0.483187887044;ELK1,4_GABP{A,B1}:0.461008643907;RFX1:0.453804666063;NFE2:0.438699540418;ALX4:0.435261396517;TLX2:0.422536756978;FOXM1:0.411709208258;OCT4_SOX2{dimer}:0.409684461156;NFE2L2:0.405630186171;EBF1:0.396847707841;ONECUT1,2:0.396174585578;BACH2:0.38565888224;GFI1B:0.37001753252;EVI1:0.34819202133;TP53:0.343779734831;ZBTB6:0.333979081191;CUX2:0.332363152851;TFAP2{A,C}:0.331354913544;TAL1_TCF{3,4,12}:0.318217691099;MYBL2:0.316271498654;NR1H4:0.310933755309;PBX1:0.310745004025;TFAP2B:0.257119779175;POU2F1..3:0.246612876637;PATZ1:0.246514686035;HIC1:0.245112576757;FOS_FOS{B,L1}_JUN{B,D}:0.228858462175;HOX{A5,B5}:0.21348235133;HSF1,2:0.206959074936;LEF1_TCF7_TCF7L1,2:0.199174380805;SP1:0.192825354775;CRX:0.185901023484;RREB1:0.181220641838;NANOG:0.180211535044;STAT1,3:0.175744416685;KLF4:0.164338893035;CDC5L:0.148642986637;PRDM1:0.140617159071;PAX5:0.130611199099;NFIX:0.125199881823;IKZF1:0.120197503694;HOX{A6,A7,B6,B7}:0.11363439129;RBPJ:0.1093573636;bHLH_family:0.108706916478;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.103776825436;TEF:0.1000939963;POU5F1:0.085957420229;LHX3,4:0.0812181152581;MYB:0.0728936171304;FOXQ1:0.0677384756117;FOSL2:0.0644909283157;EP300:0.0635807305397;FOX{I1,J2}:0.0556109948412;TBX4,5:0.0496294956253;GCM1,2:0.0252935781697;YY1:0.00785358288823;GATA4:-0.0144103114764;MEF2{A,B,C,D}:-0.0150541943603;MAZ:-0.0153335901001;CDX1,2,4:-0.0170800475802;ZFP161:-0.0191598101563;FOX{F1,F2,J1}:-0.033116065773;RXR{A,B,G}:-0.0635582853244;MTE{core}:-0.0734782786996;FOXA2:-0.0847933466878;POU1F1:-0.0961003282527;MYOD1:-0.0967704082586;NKX3-2:-0.112012812012;HNF1A:-0.118257621388;BREu{core}:-0.125436066833;PAX1,9:-0.131211589904;IRF1,2:-0.132238232741;PPARG:-0.132910553981;ELF1,2,4:-0.133399763355;IRF7:-0.140218263089;IKZF2:-0.142101911517;MED-1{core}:-0.157008827783;STAT2,4,6:-0.158073854574;NFATC1..3:-0.15962008775;DBP:-0.180337332654;SMAD1..7,9:-0.182834495893;RUNX1..3:-0.192969036119;TOPORS:-0.192987222319;NR6A1:-0.193243903967;TFCP2:-0.196320218433;DMAP1_NCOR{1,2}_SMARC:-0.20864539805;SREBF1,2:-0.213257344232;HLF:-0.216669229126;SOX{8,9,10}:-0.228112327822;ZBTB16:-0.232189307755;MYFfamily:-0.246464780575;GATA6:-0.247218309394;HOX{A4,D4}:-0.251881268046;HNF4A_NR2F1,2:-0.261781049149;PAX3,7:-0.263409909553;UFEwm:-0.265190863809;RORA:-0.271571748854;SRF:-0.277683006477;NFKB1_REL_RELA:-0.278765054559;ATF2:-0.281229261349;LMO2:-0.292335370856;ETS1,2:-0.299320028685;RFX2..5_RFXANK_RFXAP:-0.303726459801;PAX6:-0.31372852823;XBP1:-0.327174131894;FOXO1,3,4:-0.349288712364;FOXN1:-0.358508783565;SNAI1..3:-0.387231895152;REST:-0.40319522783;CEBPA,B_DDIT3:-0.405816071365;CREB1:-0.413296228401;GZF1:-0.419899109939;SPIB:-0.422731285586;VSX1,2:-0.42318298893;HMGA1,2:-0.45578221579;JUN:-0.464680084453;FOXP3:-0.492596705842;TGIF1:-0.496466722919;ATF5_CREB3:-0.504491830844;ALX1:-0.52129987078;TFAP4:-0.52503641612;SPI1:-0.529304045129;NR5A1,2:-0.586895590424;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.595174465073;ESRRA:-0.596713503804;NKX2-2,8:-0.59766547025;ATF4:-0.603733081887;SOX5:-0.6154507639;NFIL3:-0.616672524116;POU6F1:-0.621474689629;FOX{D1,D2}:-0.624958182379;NFE2L1:-0.658373806944;HAND1,2:-0.660697170104;BPTF:-0.666705976034;FOXL1:-0.706653019182;T:-0.712345062373;SPZ1:-0.715503908595;AHR_ARNT_ARNT2:-0.74944265521;ZNF423:-0.749966252093;HES1:-0.758936245558;NHLH1,2:-0.759679488131;NKX2-1,4:-0.787933336538;PAX2:-0.796134735369;HMX1:-0.842171053837;ZEB1:-0.920020065438;MAFB:-0.949567198456;GLI1..3:-0.973031800126;NANOG{mouse}:-0.974287181741;ATF6:-1.00971840022;MTF1:-1.01441224337;TBP:-1.02453780208;AR:-1.17451334092;ESR1:-1.23409759281;HIF1A:-1.44653644786HOXA9_MEIS1:1.56891988048;ZNF384:1.50429374809;TFDP1:1.48315412703;POU3F1..4:1.28353871852;FOXD3:1.15739213951;GFI1:1.09682925119;ZIC1..3:1.00548160803;PRRX1,2:0.987949829276;XCPE1{core}:0.946020048246;ADNP_IRX_SIX_ZHX:0.916756218003;E2F1..5:0.912049446247;NKX2-3_NKX2-5:0.897542744393;NKX6-1,2:0.869410711027;NR3C1:0.861893142482;ZNF143:0.838769432062;EN1,2:0.833327232514;NRF1:0.817646622573;PITX1..3:0.80014656972;EVI1:0.782884243858;TLX1..3_NFIC{dimer}:0.760301678428;PAX4:0.727914137584;ARID5B:0.726601756758;STAT5{A,B}:0.724040308376;NFY{A,B,C}:0.708599381552;NKX3-1:0.704302365479;TEAD1:0.682307687602;FOXM1:0.668689159644;HBP1_HMGB_SSRP1_UBTF:0.650089253339;OCT4_SOX2{dimer}:0.554838880731;EGR1..3:0.543722264576;ALX4:0.54301582737;SOX2:0.537297085458;SOX17:0.529742096863;ELK1,4_GABP{A,B1}:0.524237296128;AIRE:0.4922945392;MZF1:0.467499332397;RFX1:0.464430303252;ZNF148:0.456877837395;GTF2I:0.439649537783;GTF2A1,2:0.433937649855;TLX2:0.430857691968;HOX{A6,A7,B6,B7}:0.423264982165;GFI1B:0.409704372625;PDX1:0.403395697911;ONECUT1,2:0.403311650471;MYBL2:0.40138079277;TEF:0.395779604734;TFAP2{A,C}:0.395212660146;TAL1_TCF{3,4,12}:0.392795959431;ZNF238:0.387396615103;NFE2:0.375837715522;HOX{A5,B5}:0.365501924496;NFIX:0.364927391797;BACH2:0.353355051367;NFE2L2:0.347210665671;FOXQ1:0.346445790501;PBX1:0.343020842105;IKZF2:0.334434171323;LHX3,4:0.300315595916;KLF4:0.294401232163;SP1:0.29234147276;GATA4:0.29126086062;EBF1:0.289518596668;TP53:0.284037939544;RBPJ:0.279940551118;HIC1:0.26694633634;RXRA_VDR{dimer}:0.256985529281;TFAP2B:0.252086297802;HSF1,2:0.241762064107;CDX1,2,4:0.224294686574;PRDM1:0.223697517975;CUX2:0.220153261232;PAX8:0.215699228713;STAT1,3:0.208315610608;FOS_FOS{B,L1}_JUN{B,D}:0.199582572243;LEF1_TCF7_TCF7L1,2:0.173709422215;FOX{F1,F2,J1}:0.172074405678;PATZ1:0.171400607961;CRX:0.156051289983;POU2F1..3:0.135119918285;ZBTB6:0.126281320493;RREB1:0.115636995867;FOXP1:0.107248936749;ZFP161:0.0962191048444;NR1H4:0.0898864719947;DBP:0.076687927317;HMGA1,2:0.0702330893517;POU5F1:0.0700515352699;PPARG:0.0644075938692;GCM1,2:0.054776104111;FOX{I1,J2}:0.0529976597621;MEF2{A,B,C,D}:0.0324850790642;MYB:0.0279756868478;FOXA2:0.0226085639019;NANOG:0.0210490830619;bHLH_family:0.0169237731466;PAX5:0.0165510444121;ZBTB16:0.00969705596414;FOSL2:0.000419134560721;CDC5L:-0.003791170842;PAX6:-0.016037677669;MAZ:-0.0291300535691;PAX3,7:-0.036916662813;IRF7:-0.0547088789851;POU1F1:-0.0573929669937;HNF1A:-0.0612811437156;MED-1{core}:-0.0621975045573;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.0654864281347;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0744799394941;MTE{core}:-0.0835281754505;YY1:-0.096011907499;IRF1,2:-0.0965854553695;NFATC1..3:-0.131682678989;RXR{A,B,G}:-0.140749958487;BREu{core}:-0.169341066623;RUNX1..3:-0.174194242764;EP300:-0.179671100097;DMAP1_NCOR{1,2}_SMARC:-0.179753538878;ELF1,2,4:-0.182568858764;PAX1,9:-0.187757660664;STAT2,4,6:-0.204777133229;NKX3-2:-0.210036102811;FOXO1,3,4:-0.217311066637;HOX{A4,D4}:-0.217843938571;BPTF:-0.218574937013;TFCP2:-0.223777731752;FOXN1:-0.224914110654;HNF4A_NR2F1,2:-0.226866237077;SMAD1..7,9:-0.228302755109;UFEwm:-0.242797136038;IKZF1:-0.243773743414;SOX{8,9,10}:-0.247985797887;HLF:-0.251087879993;GATA6:-0.252600918913;SRF:-0.267698329311;MYFfamily:-0.278950239244;LMO2:-0.28492400918;MYOD1:-0.295078764939;SREBF1,2:-0.295376442915;NFKB1_REL_RELA:-0.298840253187;VSX1,2:-0.319010117347;TBX4,5:-0.3195608387;POU6F1:-0.323295326704;RORA:-0.326324102292;T:-0.337013705788;ETS1,2:-0.341808504568;NR6A1:-0.346700623035;XBP1:-0.347971395184;SNAI1..3:-0.381954753957;CEBPA,B_DDIT3:-0.384772828434;SOX5:-0.386033407687;ATF2:-0.417313391185;TGIF1:-0.43231836085;SPIB:-0.435029987979;FOXP3:-0.445680947049;REST:-0.450385534166;FOXL1:-0.463835183603;SPI1:-0.491033514912;ATF4:-0.491639242431;GZF1:-0.504421677372;ATF5_CREB3:-0.512056098113;TOPORS:-0.523925803734;JUN:-0.539785820423;TFAP4:-0.546592761034;RFX2..5_RFXANK_RFXAP:-0.563323257556;NKX2-1,4:-0.584514308746;NFIL3:-0.587545586975;CREB1:-0.598143438596;ESRRA:-0.646185228617;ZNF423:-0.68744848675;ALX1:-0.699007194503;SPZ1:-0.699294522183;GLI1..3:-0.710422105591;PAX2:-0.713463081882;HAND1,2:-0.714351002054;NR5A1,2:-0.718276199324;NFE2L1:-0.726355184719;NHLH1,2:-0.740298406838;FOX{D1,D2}:-0.806806231106;AHR_ARNT_ARNT2:-0.807773028169;HES1:-0.843751799549;MTF1:-0.857129175993;NKX2-2,8:-0.871206911279;HMX1:-0.871478569741;ZEB1:-0.890338797116;ATF6:-1.00401389868;MAFB:-1.06034076665;TBP:-1.07851206176;AR:-1.09445392476;NANOG{mouse}:-1.10226740796;ESR1:-1.20572312277;HIF1A:-1.34887487836 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10444-106F3;search_select_hide=table117:FF:10444-106F3 | |||
}} | }} | ||
Latest revision as of 14:02, 3 June 2020
| Name: | glioblastoma cell line:A172 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11248,CNhs11185 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
|
| CAGE Accession numbers | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| HumanCAGEScan Download raw sequence, BAM & CTSS | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11248
library id: CNhs11185
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11248
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.611 |
| 10 | 10 | 0.277 |
| 100 | 100 | 0.944 |
| 101 | 101 | 0.422 |
| 102 | 102 | 0.484 |
| 103 | 103 | 0.624 |
| 104 | 104 | 0.624 |
| 105 | 105 | 0.771 |
| 106 | 106 | 3.11104e-4 |
| 107 | 107 | 0.38 |
| 108 | 108 | 0.561 |
| 109 | 109 | 0.378 |
| 11 | 11 | 0.321 |
| 110 | 110 | 0.698 |
| 111 | 111 | 0.374 |
| 112 | 112 | 0.0136 |
| 113 | 113 | 0.207 |
| 114 | 114 | 0.209 |
| 115 | 115 | 0.35 |
| 116 | 116 | 0.952 |
| 117 | 117 | 0.929 |
| 118 | 118 | 0.963 |
| 119 | 119 | 0.819 |
| 12 | 12 | 0.274 |
| 120 | 120 | 0.693 |
| 121 | 121 | 0.763 |
| 122 | 122 | 0.809 |
| 123 | 123 | 0.31 |
| 124 | 124 | 0.214 |
| 125 | 125 | 0.96 |
| 126 | 126 | 0.11 |
| 127 | 127 | 0.528 |
| 128 | 128 | 0.00968 |
| 129 | 129 | 0.434 |
| 13 | 13 | 0.0968 |
| 130 | 130 | 0.0775 |
| 131 | 131 | 0.229 |
| 132 | 132 | 0.632 |
| 133 | 133 | 0.402 |
| 134 | 134 | 0.478 |
| 135 | 135 | 0.0744 |
| 136 | 136 | 0.117 |
| 137 | 137 | 0.0176 |
| 138 | 138 | 0.211 |
| 139 | 139 | 0.00206 |
| 14 | 14 | 0.852 |
| 140 | 140 | 0.707 |
| 141 | 141 | 0.549 |
| 142 | 142 | 0.0452 |
| 143 | 143 | 0.445 |
| 144 | 144 | 0.622 |
| 145 | 145 | 0.624 |
| 146 | 146 | 0.671 |
| 147 | 147 | 0.46 |
| 148 | 148 | 0.204 |
| 149 | 149 | 0.257 |
| 15 | 15 | 0.67 |
| 150 | 150 | 0.834 |
| 151 | 151 | 0.534 |
| 152 | 152 | 0.33 |
| 153 | 153 | 0.166 |
| 154 | 154 | 0.456 |
| 155 | 155 | 0.262 |
| 156 | 156 | 0.707 |
| 157 | 157 | 0.757 |
| 158 | 158 | 0.685 |
| 159 | 159 | 0.651 |
| 16 | 16 | 0.172 |
| 160 | 160 | 0.349 |
| 161 | 161 | 0.589 |
| 162 | 162 | 0.892 |
| 163 | 163 | 0.108 |
| 164 | 164 | 0.271 |
| 165 | 165 | 0.55 |
| 166 | 166 | 0.604 |
| 167 | 167 | 0.252 |
| 168 | 168 | 0.552 |
| 169 | 169 | 0.43 |
| 17 | 17 | 0.541 |
| 18 | 18 | 0.353 |
| 19 | 19 | 0.373 |
| 2 | 2 | 0.61 |
| 20 | 20 | 0.827 |
| 21 | 21 | 0.599 |
| 22 | 22 | 0.733 |
| 23 | 23 | 0.37 |
| 24 | 24 | 0.633 |
| 25 | 25 | 0.26 |
| 26 | 26 | 0.442 |
| 27 | 27 | 0.132 |
| 28 | 28 | 0.326 |
| 29 | 29 | 0.331 |
| 3 | 3 | 0.371 |
| 30 | 30 | 0.66 |
| 31 | 31 | 0.962 |
| 32 | 32 | 0.00542 |
| 33 | 33 | 0.448 |
| 34 | 34 | 0.328 |
| 35 | 35 | 0.116 |
| 36 | 36 | 0.0219 |
| 37 | 37 | 0.517 |
| 38 | 38 | 0.593 |
| 39 | 39 | 0.235 |
| 4 | 4 | 0.832 |
| 40 | 40 | 0.128 |
| 41 | 41 | 0.424 |
| 42 | 42 | 0.925 |
| 43 | 43 | 0.109 |
| 44 | 44 | 0.189 |
| 45 | 45 | 0.911 |
| 46 | 46 | 0.239 |
| 47 | 47 | 0.837 |
| 48 | 48 | 0.735 |
| 49 | 49 | 0.0642 |
| 5 | 5 | 0.0718 |
| 50 | 50 | 0.936 |
| 51 | 51 | 0.671 |
| 52 | 52 | 0.107 |
| 53 | 53 | 0.873 |
| 54 | 54 | 0.958 |
| 55 | 55 | 0.798 |
| 56 | 56 | 0.545 |
| 57 | 57 | 0.622 |
| 58 | 58 | 0.0507 |
| 59 | 59 | 0.16 |
| 6 | 6 | 0.229 |
| 60 | 60 | 0.00448 |
| 61 | 61 | 0.806 |
| 62 | 62 | 0.0944 |
| 63 | 63 | 0.229 |
| 64 | 64 | 0.374 |
| 65 | 65 | 0.0847 |
| 66 | 66 | 6.33585e-4 |
| 67 | 67 | 0.807 |
| 68 | 68 | 0.741 |
| 69 | 69 | 0.459 |
| 7 | 7 | 0.0322 |
| 70 | 70 | 0.00331 |
| 71 | 71 | 0.476 |
| 72 | 72 | 0.26 |
| 73 | 73 | 0.314 |
| 74 | 74 | 0.888 |
| 75 | 75 | 0.219 |
| 76 | 76 | 0.0569 |
| 77 | 77 | 0.345 |
| 78 | 78 | 0.466 |
| 79 | 79 | 0.0943 |
| 8 | 8 | 0.799 |
| 80 | 80 | 0.773 |
| 81 | 81 | 0.483 |
| 82 | 82 | 0.381 |
| 83 | 83 | 0.851 |
| 84 | 84 | 0.701 |
| 85 | 85 | 0.00462 |
| 86 | 86 | 0.419 |
| 87 | 87 | 0.711 |
| 88 | 88 | 0.555 |
| 89 | 89 | 0.0335 |
| 9 | 9 | 0.114 |
| 90 | 90 | 0.761 |
| 91 | 91 | 0.0888 |
| 92 | 92 | 0.178 |
| 93 | 93 | 0.754 |
| 94 | 94 | 0.364 |
| 95 | 95 | 0.0995 |
| 96 | 96 | 0.167 |
| 97 | 97 | 0.0954 |
| 98 | 98 | 0.00431 |
| 99 | 99 | 0.583 |
library id: CNhs11185
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.643 |
| 10 | 10 | 0.359 |
| 100 | 100 | 0.99 |
| 101 | 101 | 0.762 |
| 102 | 102 | 0.219 |
| 103 | 103 | 0.439 |
| 104 | 104 | 0.633 |
| 105 | 105 | 0.551 |
| 106 | 106 | 5.4886e-4 |
| 107 | 107 | 0.397 |
| 108 | 108 | 0.557 |
| 109 | 109 | 0.396 |
| 11 | 11 | 0.319 |
| 110 | 110 | 0.666 |
| 111 | 111 | 0.509 |
| 112 | 112 | 0.00791 |
| 113 | 113 | 0.23 |
| 114 | 114 | 0.301 |
| 115 | 115 | 0.396 |
| 116 | 116 | 0.831 |
| 117 | 117 | 0.963 |
| 118 | 118 | 0.657 |
| 119 | 119 | 0.934 |
| 12 | 12 | 0.379 |
| 120 | 120 | 0.578 |
| 121 | 121 | 0.844 |
| 122 | 122 | 0.785 |
| 123 | 123 | 0.862 |
| 124 | 124 | 0.273 |
| 125 | 125 | 0.736 |
| 126 | 126 | 0.0342 |
| 127 | 127 | 0.689 |
| 128 | 128 | 0.00681 |
| 129 | 129 | 0.408 |
| 13 | 13 | 0.0756 |
| 130 | 130 | 0.0755 |
| 131 | 131 | 0.0761 |
| 132 | 132 | 0.479 |
| 133 | 133 | 0.577 |
| 134 | 134 | 0.671 |
| 135 | 135 | 0.122 |
| 136 | 136 | 0.121 |
| 137 | 137 | 0.00945 |
| 138 | 138 | 0.275 |
| 139 | 139 | 0.00813 |
| 14 | 14 | 0.943 |
| 140 | 140 | 0.591 |
| 141 | 141 | 0.603 |
| 142 | 142 | 0.0192 |
| 143 | 143 | 0.329 |
| 144 | 144 | 0.984 |
| 145 | 145 | 0.76 |
| 146 | 146 | 0.753 |
| 147 | 147 | 0.449 |
| 148 | 148 | 0.42 |
| 149 | 149 | 0.37 |
| 15 | 15 | 0.744 |
| 150 | 150 | 0.893 |
| 151 | 151 | 0.629 |
| 152 | 152 | 0.256 |
| 153 | 153 | 0.34 |
| 154 | 154 | 0.585 |
| 155 | 155 | 0.372 |
| 156 | 156 | 0.891 |
| 157 | 157 | 0.885 |
| 158 | 158 | 0.469 |
| 159 | 159 | 0.793 |
| 16 | 16 | 0.284 |
| 160 | 160 | 0.324 |
| 161 | 161 | 0.654 |
| 162 | 162 | 0.866 |
| 163 | 163 | 0.337 |
| 164 | 164 | 0.148 |
| 165 | 165 | 0.556 |
| 166 | 166 | 0.751 |
| 167 | 167 | 0.235 |
| 168 | 168 | 0.751 |
| 169 | 169 | 0.477 |
| 17 | 17 | 0.489 |
| 18 | 18 | 0.481 |
| 19 | 19 | 0.456 |
| 2 | 2 | 0.749 |
| 20 | 20 | 0.946 |
| 21 | 21 | 0.733 |
| 22 | 22 | 0.824 |
| 23 | 23 | 0.355 |
| 24 | 24 | 0.523 |
| 25 | 25 | 0.244 |
| 26 | 26 | 0.396 |
| 27 | 27 | 0.234 |
| 28 | 28 | 0.262 |
| 29 | 29 | 0.21 |
| 3 | 3 | 0.626 |
| 30 | 30 | 0.657 |
| 31 | 31 | 0.904 |
| 32 | 32 | 0.00719 |
| 33 | 33 | 0.395 |
| 34 | 34 | 0.24 |
| 35 | 35 | 0.137 |
| 36 | 36 | 0.0152 |
| 37 | 37 | 0.504 |
| 38 | 38 | 0.843 |
| 39 | 39 | 0.186 |
| 4 | 4 | 0.847 |
| 40 | 40 | 0.0351 |
| 41 | 41 | 0.43 |
| 42 | 42 | 0.756 |
| 43 | 43 | 0.0766 |
| 44 | 44 | 0.0649 |
| 45 | 45 | 0.917 |
| 46 | 46 | 0.241 |
| 47 | 47 | 0.919 |
| 48 | 48 | 0.872 |
| 49 | 49 | 0.0676 |
| 5 | 5 | 0.0484 |
| 50 | 50 | 0.992 |
| 51 | 51 | 0.623 |
| 52 | 52 | 0.0769 |
| 53 | 53 | 0.43 |
| 54 | 54 | 0.798 |
| 55 | 55 | 0.786 |
| 56 | 56 | 0.223 |
| 57 | 57 | 0.476 |
| 58 | 58 | 0.0269 |
| 59 | 59 | 0.15 |
| 6 | 6 | 0.372 |
| 60 | 60 | 0.00246 |
| 61 | 61 | 0.969 |
| 62 | 62 | 0.0783 |
| 63 | 63 | 0.303 |
| 64 | 64 | 0.391 |
| 65 | 65 | 0.121 |
| 66 | 66 | 8.6527e-4 |
| 67 | 67 | 0.934 |
| 68 | 68 | 0.914 |
| 69 | 69 | 0.444 |
| 7 | 7 | 0.0407 |
| 70 | 70 | 0.0296 |
| 71 | 71 | 0.539 |
| 72 | 72 | 0.13 |
| 73 | 73 | 0.199 |
| 74 | 74 | 0.888 |
| 75 | 75 | 0.275 |
| 76 | 76 | 0.0324 |
| 77 | 77 | 0.656 |
| 78 | 78 | 0.515 |
| 79 | 79 | 0.164 |
| 8 | 8 | 0.748 |
| 80 | 80 | 0.915 |
| 81 | 81 | 0.522 |
| 82 | 82 | 0.527 |
| 83 | 83 | 0.875 |
| 84 | 84 | 0.838 |
| 85 | 85 | 0.00404 |
| 86 | 86 | 0.367 |
| 87 | 87 | 0.502 |
| 88 | 88 | 0.736 |
| 89 | 89 | 0.0855 |
| 9 | 9 | 0.0637 |
| 90 | 90 | 0.478 |
| 91 | 91 | 0.0965 |
| 92 | 92 | 0.271 |
| 93 | 93 | 0.555 |
| 94 | 94 | 0.173 |
| 95 | 95 | 0.124 |
| 96 | 96 | 0.118 |
| 97 | 97 | 0.143 |
| 98 | 98 | 0.0123 |
| 99 | 99 | 0.503 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11248
library id: CNhs11185
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100016 A-172 cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000095 (neuron associated cell)
0000243 (glial cell (sensu Vertebrata))
0000125 (glial cell)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
3093 (nervous system cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000955 (brain)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0101530 (glioblastoma cell line sample)
0100711 (glioma cell line sample)
0100255 (brain cell line sample)
0100690 (brain cancer cell line sample)
0101531 (glial cell line sample)
0100016 (A-172 cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000339 (glioblast (sensu Vertebrata))
CL:0000221 (ectodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006238 (future brain)
UBERON:0010316 (germ layer / neural crest)
