FF:10508-107D4: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00004974 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL: | |DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00004974 | ||
|ancestors_in_disease_facet=DOID: | |HumanCAGEScanFiles=NCig10062;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep1.NCig10062.10508-107D4.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep1.NCig10062.10508-107D4.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep1.NCig10062.10508-107D4.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep1.NCig10062.10508-107D4.hg19.GCTATA.pairs.bed.gz!NCig10126;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep2.NCig10126.10508-107D4.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep2.NCig10126.10508-107D4.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep2.NCig10126.10508-107D4.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/neuroblastoma%2520cell%2520line%253aCHP-134%252c%2520tech_rep2.NCig10126.10508-107D4.hg19.GCTATA.pairs.bed.gz | ||
|accession_numbers=CAGE;DRX007960;DRR008832;DRZ000257;DRZ001642;DRZ011607;DRZ012992 | |||
|accession_numbers_RNASeq=RNA-Seq;DRX057128;DRR062887;DRZ007963 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000013,UBERON:0004121,UBERON:0011216,UBERON:0002410,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0000010,UBERON:0001016 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000333,CL:0000003,CL:0000548,CL:0002321,CL:0000219,CL:0000255 | |||
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:171,DOID:3095,DOID:2994,DOID:169 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100932,FF:0102989 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0100932 | |fonse_cell_line=FF:0100932 | ||
|fonse_cell_line_closure=FF:0100932 | |fonse_cell_line_closure=FF:0100932 | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aCHP-134.CNhs11276.10508-107D4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aCHP-134.CNhs11276.10508-107D4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aCHP-134.CNhs11276.10508-107D4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aCHP-134.CNhs11276.10508-107D4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aCHP-134.CNhs11276.10508-107D4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10508-107D4 | |id=FF:10508-107D4 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0102989 | ||
|is_obsolete= | |||
|library_id=CNhs11276 | |||
|library_id_phase_based=2:CNhs11276 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10508 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10508 | |||
|name=neuroblastoma cell line:CHP-134 | |name=neuroblastoma cell line:CHP-134 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 63: | ||
|profile_cagescan=NCig10062,,, | |profile_cagescan=NCig10062,,, | ||
|profile_hcage=CNhs11276,LSID759,release008,COMPLETED | |profile_hcage=CNhs11276,LSID759,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=107 | |rna_box=107 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 56: | Line 80: | ||
|rna_tube_id=107D4 | |rna_tube_id=107D4 | ||
|rna_weight_ug=59.164 | |rna_weight_ug=59.164 | ||
|rnaseq_library_id=RDhi10071 | |||
|sample_age= | |sample_age= | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB0487 | |sample_cell_catalog=RCB0487 | ||
|sample_cell_line=CHP-134 | |sample_cell_line=CHP-134 | ||
| Line 69: | Line 95: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.72803680563505e-284!GO:0043231;intracellular membrane-bound organelle;6.73662208781873e-257!GO:0043227;membrane-bound organelle;1.91480426750262e-256!GO:0043226;organelle;4.42626346848446e-256!GO:0043229;intracellular organelle;8.9218944342866e-256!GO:0044422;organelle part;5.44549909136978e-151!GO:0044446;intracellular organelle part;8.06131209792233e-150!GO:0005634;nucleus;1.10655918494962e-146!GO:0005737;cytoplasm;4.25261828528587e-132!GO:0032991;macromolecular complex;6.25522755229376e-110!GO:0043170;macromolecule metabolic process;7.27363396493897e-106!GO:0044237;cellular metabolic process;2.78117106828703e-105!GO:0044238;primary metabolic process;4.2937117631897e-103!GO:0030529;ribonucleoprotein complex;2.75218748412283e-98!GO:0003723;RNA binding;3.61666256221732e-96!GO:0044444;cytoplasmic part;6.91880037350848e-96!GO:0044428;nuclear part;4.62881029730065e-92!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.75700905165568e-88!GO:0010467;gene expression;1.48638719218911e-87!GO:0043283;biopolymer metabolic process;8.06511768919782e-86!GO:0043233;organelle lumen;1.91193338355214e-82!GO:0031974;membrane-enclosed lumen;1.91193338355214e-82!GO:0003676;nucleic acid binding;2.85147991274626e-74!GO:0006396;RNA processing;2.1208623741793e-67!GO:0031981;nuclear lumen;6.91268270183557e-57!GO:0005840;ribosome;1.08976414535557e-55!GO:0016070;RNA metabolic process;1.08976414535557e-55!GO:0005739;mitochondrion;7.34563807837575e-55!GO:0043234;protein complex;4.86589516404801e-54!GO:0016043;cellular component organization and biogenesis;4.48719576401592e-53!GO:0016071;mRNA metabolic process;6.61790505761648e-49!GO:0006412;translation;1.67114036052327e-47!GO:0003735;structural constituent of ribosome;7.3748189407284e-47!GO:0008380;RNA splicing;1.03590721388005e-45!GO:0006259;DNA metabolic process;1.36345828696987e-45!GO:0005515;protein binding;1.80064678823618e-44!GO:0006397;mRNA processing;5.5333902759863e-44!GO:0006996;organelle organization and biogenesis;4.94929875726652e-43!GO:0033279;ribosomal subunit;5.01407639568521e-42!GO:0043228;non-membrane-bound organelle;4.1131732392955e-41!GO:0043232;intracellular non-membrane-bound organelle;4.1131732392955e-41!GO:0033036;macromolecule localization;1.37081966500753e-39!GO:0015031;protein transport;2.61196267229436e-39!GO:0031090;organelle membrane;2.61696686138816e-39!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.84719842805395e-37!GO:0044429;mitochondrial part;4.65404878782671e-37!GO:0008104;protein localization;1.09708176943074e-34!GO:0045184;establishment of protein localization;2.23150744250977e-34!GO:0009059;macromolecule biosynthetic process;2.41401234514771e-34!GO:0005654;nucleoplasm;6.35757677988731e-34!GO:0044249;cellular biosynthetic process;1.67187978396316e-33!GO:0031967;organelle envelope;1.01795662217777e-32!GO:0031975;envelope;1.32208264164046e-32!GO:0009058;biosynthetic process;1.96795603831949e-32!GO:0046907;intracellular transport;3.41575807991734e-32!GO:0065003;macromolecular complex assembly;6.9749177657936e-32!GO:0005681;spliceosome;1.04579188898808e-31!GO:0019538;protein metabolic process;1.42322172645823e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.5167128261231e-31!GO:0000166;nucleotide binding;9.95190641726907e-31!GO:0044267;cellular protein metabolic process;1.05352939874784e-29!GO:0044260;cellular macromolecule metabolic process;1.02480400920733e-28!GO:0022607;cellular component assembly;2.77384238333374e-28!GO:0007049;cell cycle;9.29644243285412e-28!GO:0044451;nucleoplasm part;1.96583383936727e-27!GO:0005694;chromosome;3.65229560406068e-27!GO:0006974;response to DNA damage stimulus;2.93013479343542e-26!GO:0006886;intracellular protein transport;3.64279754762266e-26!GO:0051276;chromosome organization and biogenesis;5.59623817553239e-26!GO:0051649;establishment of cellular localization;2.70856742539836e-25!GO:0044445;cytosolic part;9.39482750650764e-25!GO:0051641;cellular localization;1.21063467215298e-24!GO:0006281;DNA repair;1.66124165907624e-24!GO:0005829;cytosol;3.07233397950342e-24!GO:0005730;nucleolus;8.33365260716228e-24!GO:0019866;organelle inner membrane;5.95300396217405e-23!GO:0016462;pyrophosphatase activity;8.97370415811779e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.05465493893581e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;1.35314428182813e-22!GO:0005740;mitochondrial envelope;1.66217374529246e-22!GO:0017111;nucleoside-triphosphatase activity;2.10255726198519e-22!GO:0044427;chromosomal part;2.48288982639587e-22!GO:0015935;small ribosomal subunit;1.1506710384089e-21!GO:0016874;ligase activity;1.54867357336695e-21!GO:0015934;large ribosomal subunit;2.41111192116801e-21!GO:0022402;cell cycle process;2.61886786083341e-21!GO:0031966;mitochondrial membrane;2.94459927838634e-21!GO:0022618;protein-RNA complex assembly;4.27926089185993e-21!GO:0006325;establishment and/or maintenance of chromatin architecture;6.63662247982628e-21!GO:0005743;mitochondrial inner membrane;7.79172269720576e-21!GO:0006512;ubiquitin cycle;4.7108832295929e-20!GO:0006323;DNA packaging;8.26435228753754e-20!GO:0006457;protein folding;1.42368334323681e-19!GO:0032553;ribonucleotide binding;2.14452446594698e-19!GO:0032555;purine ribonucleotide binding;2.14452446594698e-19!GO:0000278;mitotic cell cycle;4.66976233387069e-19!GO:0006119;oxidative phosphorylation;5.28359215879935e-19!GO:0044455;mitochondrial membrane part;8.1705389086463e-19!GO:0008135;translation factor activity, nucleic acid binding;8.95146048031337e-19!GO:0006350;transcription;2.00844630037373e-18!GO:0017076;purine nucleotide binding;2.63535252826554e-18!GO:0031980;mitochondrial lumen;9.58118651109389e-18!GO:0005759;mitochondrial matrix;9.58118651109389e-18!GO:0019222;regulation of metabolic process;1.08659264722335e-17!GO:0042254;ribosome biogenesis and assembly;7.44129814338657e-17!GO:0004386;helicase activity;1.2468940411918e-16!GO:0009719;response to endogenous stimulus;2.21696429917874e-16!GO:0015630;microtubule cytoskeleton;3.43852297840581e-16!GO:0008134;transcription factor binding;3.43852297840581e-16!GO:0032774;RNA biosynthetic process;4.97651999196024e-16!GO:0012505;endomembrane system;6.3745169579761e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;7.49685678972994e-16!GO:0000375;RNA splicing, via transesterification reactions;7.49685678972994e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.49685678972994e-16!GO:0006351;transcription, DNA-dependent;8.34425998300005e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.25881382048493e-15!GO:0032559;adenyl ribonucleotide binding;1.43259268460716e-15!GO:0006333;chromatin assembly or disassembly;1.4457359071155e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.4457359071155e-15!GO:0005524;ATP binding;1.4797135875848e-15!GO:0022403;cell cycle phase;2.00484704806177e-15!GO:0006260;DNA replication;2.00484704806177e-15!GO:0031323;regulation of cellular metabolic process;3.34958562080826e-15!GO:0051301;cell division;3.50572142137408e-15!GO:0010468;regulation of gene expression;3.81366415329388e-15!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.16727553146556e-15!GO:0005746;mitochondrial respiratory chain;5.00210291868439e-15!GO:0016887;ATPase activity;5.14971886411149e-15!GO:0005761;mitochondrial ribosome;8.69438206610085e-15!GO:0000313;organellar ribosome;8.69438206610085e-15!GO:0000087;M phase of mitotic cell cycle;9.59950526514561e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.02046024061013e-14!GO:0016568;chromatin modification;1.11988941288604e-14!GO:0008026;ATP-dependent helicase activity;1.3904878496476e-14!GO:0042623;ATPase activity, coupled;1.5728978137753e-14!GO:0019941;modification-dependent protein catabolic process;1.78336824835474e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.78336824835474e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.81025017356561e-14!GO:0030554;adenyl nucleotide binding;2.16764440311423e-14!GO:0007067;mitosis;2.39118008406247e-14!GO:0003743;translation initiation factor activity;3.26946335654609e-14!GO:0003677;DNA binding;4.33521593324396e-14!GO:0044257;cellular protein catabolic process;5.34889316513375e-14!GO:0005794;Golgi apparatus;6.035123936265e-14!GO:0045449;regulation of transcription;9.97184522385788e-14!GO:0065004;protein-DNA complex assembly;1.39136578496999e-13!GO:0031965;nuclear membrane;2.01566484143277e-13!GO:0016604;nuclear body;2.34033239434889e-13!GO:0050136;NADH dehydrogenase (quinone) activity;2.51280115629673e-13!GO:0003954;NADH dehydrogenase activity;2.51280115629673e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.51280115629673e-13!GO:0044453;nuclear membrane part;3.8868439405075e-13!GO:0006413;translational initiation;4.15513444062592e-13!GO:0006399;tRNA metabolic process;4.28231858062327e-13!GO:0051082;unfolded protein binding;5.20598141645382e-13!GO:0006403;RNA localization;6.15654678229926e-13!GO:0006605;protein targeting;7.83104661238008e-13!GO:0044265;cellular macromolecule catabolic process;7.93017827153805e-13!GO:0006355;regulation of transcription, DNA-dependent;8.13208426527032e-13!GO:0000785;chromatin;9.86672997024334e-13!GO:0005643;nuclear pore;9.89038951610587e-13!GO:0050657;nucleic acid transport;1.62409597328259e-12!GO:0051236;establishment of RNA localization;1.62409597328259e-12!GO:0050658;RNA transport;1.62409597328259e-12!GO:0000279;M phase;1.66603616317891e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.03069984877974e-12!GO:0043412;biopolymer modification;3.60425261433256e-12!GO:0008565;protein transporter activity;6.66717240755766e-12!GO:0050794;regulation of cellular process;8.23981510750366e-12!GO:0006364;rRNA processing;9.06234762696113e-12!GO:0042775;organelle ATP synthesis coupled electron transport;9.89794426315155e-12!GO:0042773;ATP synthesis coupled electron transport;9.89794426315155e-12!GO:0048193;Golgi vesicle transport;1.43553906998022e-11!GO:0003712;transcription cofactor activity;1.69142493385476e-11!GO:0016072;rRNA metabolic process;2.07189822805694e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.07189822805694e-11!GO:0045271;respiratory chain complex I;2.07189822805694e-11!GO:0005747;mitochondrial respiratory chain complex I;2.07189822805694e-11!GO:0016607;nuclear speck;2.0815196314363e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.32624005139699e-11!GO:0005635;nuclear envelope;7.71298900639477e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.30732761439902e-11!GO:0065002;intracellular protein transport across a membrane;1.05562337134617e-10!GO:0006446;regulation of translational initiation;1.20370121910521e-10!GO:0043285;biopolymer catabolic process;1.27245068857478e-10!GO:0000502;proteasome complex (sensu Eukaryota);1.2997608868269e-10!GO:0051028;mRNA transport;1.34415783703407e-10!GO:0048770;pigment granule;2.27300129733908e-10!GO:0042470;melanosome;2.27300129733908e-10!GO:0051726;regulation of cell cycle;3.02228206272919e-10!GO:0000074;regulation of progression through cell cycle;3.6595920581098e-10!GO:0030163;protein catabolic process;4.35791948819478e-10!GO:0006464;protein modification process;6.21179417153679e-10!GO:0043566;structure-specific DNA binding;7.0565134281969e-10!GO:0006366;transcription from RNA polymerase II promoter;7.10440615568971e-10!GO:0016192;vesicle-mediated transport;7.2685520291157e-10!GO:0006913;nucleocytoplasmic transport;7.4213868809411e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.91342432528908e-10!GO:0004812;aminoacyl-tRNA ligase activity;7.91342432528908e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.91342432528908e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.14089383979312e-10!GO:0008639;small protein conjugating enzyme activity;8.73216959496092e-10!GO:0019787;small conjugating protein ligase activity;1.14994881650534e-09!GO:0046930;pore complex;1.16257105754578e-09!GO:0004842;ubiquitin-protein ligase activity;1.16552434021194e-09!GO:0051169;nuclear transport;1.52696761766305e-09!GO:0006334;nucleosome assembly;1.78015891014894e-09!GO:0043038;amino acid activation;1.87356397634892e-09!GO:0006418;tRNA aminoacylation for protein translation;1.87356397634892e-09!GO:0043039;tRNA aminoacylation;1.87356397634892e-09!GO:0009057;macromolecule catabolic process;2.1256374904001e-09!GO:0031497;chromatin assembly;2.26817292434892e-09!GO:0016881;acid-amino acid ligase activity;2.50336342443188e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.75759387839206e-09!GO:0005813;centrosome;5.7522616780829e-09!GO:0008270;zinc ion binding;7.58272792076171e-09!GO:0003697;single-stranded DNA binding;8.20568696147297e-09!GO:0006163;purine nucleotide metabolic process;9.45199384585897e-09!GO:0005874;microtubule;1.04911320276929e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.19691237401245e-08!GO:0043687;post-translational protein modification;1.26342355184315e-08!GO:0009259;ribonucleotide metabolic process;1.2704076845585e-08!GO:0000775;chromosome, pericentric region;1.28662881223218e-08!GO:0051186;cofactor metabolic process;1.38754916091721e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.70825498383795e-08!GO:0007017;microtubule-based process;2.22413497870538e-08!GO:0005815;microtubule organizing center;2.28484504832731e-08!GO:0044431;Golgi apparatus part;2.53019696410376e-08!GO:0006164;purine nucleotide biosynthetic process;2.8255448044358e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.07906056696462e-08!GO:0044248;cellular catabolic process;3.2219356574577e-08!GO:0044432;endoplasmic reticulum part;4.23582858207738e-08!GO:0005819;spindle;4.49091282181238e-08!GO:0000245;spliceosome assembly;5.10923265601281e-08!GO:0009150;purine ribonucleotide metabolic process;7.62260415686605e-08!GO:0017038;protein import;1.0099098353026e-07!GO:0050789;regulation of biological process;1.0099098353026e-07!GO:0009260;ribonucleotide biosynthetic process;1.1995963654481e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.31683494412251e-07!GO:0005783;endoplasmic reticulum;1.33722466407991e-07!GO:0006261;DNA-dependent DNA replication;1.46081677427839e-07!GO:0019829;cation-transporting ATPase activity;1.81290124737888e-07!GO:0032446;protein modification by small protein conjugation;2.1430280896322e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.30282351794045e-07!GO:0016741;transferase activity, transferring one-carbon groups;2.39804738331046e-07!GO:0045045;secretory pathway;2.39805815447238e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.49169803396276e-07!GO:0006732;coenzyme metabolic process;2.68305860320005e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.50870221845663e-07!GO:0008168;methyltransferase activity;3.78185113712811e-07!GO:0045333;cellular respiration;5.3586281676694e-07!GO:0003724;RNA helicase activity;6.32389695615716e-07!GO:0016567;protein ubiquitination;6.32913266507034e-07!GO:0005667;transcription factor complex;6.6638759850057e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.65514023095324e-07!GO:0015986;ATP synthesis coupled proton transport;8.16771186376286e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.16771186376286e-07!GO:0015631;tubulin binding;8.32161626818691e-07!GO:0043623;cellular protein complex assembly;8.32161626818691e-07!GO:0016779;nucleotidyltransferase activity;9.19504393393334e-07!GO:0009141;nucleoside triphosphate metabolic process;1.07607590916877e-06!GO:0000139;Golgi membrane;1.29839883746853e-06!GO:0051427;hormone receptor binding;1.36608567473401e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.40154657001193e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.40154657001193e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.46189803758531e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.46189803758531e-06!GO:0008094;DNA-dependent ATPase activity;1.52431586236646e-06!GO:0046914;transition metal ion binding;1.62460705432768e-06!GO:0009060;aerobic respiration;1.84951834104118e-06!GO:0000151;ubiquitin ligase complex;1.86391000225789e-06!GO:0016363;nuclear matrix;1.87903795952673e-06!GO:0003713;transcription coactivator activity;2.04479781328478e-06!GO:0051329;interphase of mitotic cell cycle;2.48822186384433e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.67828509619915e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.67828509619915e-06!GO:0003899;DNA-directed RNA polymerase activity;2.72813791653913e-06!GO:0003690;double-stranded DNA binding;2.78475396683553e-06!GO:0003682;chromatin binding;2.80694414007751e-06!GO:0045259;proton-transporting ATP synthase complex;3.01604390194056e-06!GO:0035257;nuclear hormone receptor binding;3.20723264006085e-06!GO:0007051;spindle organization and biogenesis;4.82550861164519e-06!GO:0046034;ATP metabolic process;5.19612003999695e-06!GO:0006613;cotranslational protein targeting to membrane;5.84026358700028e-06!GO:0005793;ER-Golgi intermediate compartment;6.10665184361704e-06!GO:0051188;cofactor biosynthetic process;8.35843108613054e-06!GO:0006461;protein complex assembly;8.39836964964845e-06!GO:0006754;ATP biosynthetic process;8.57176460731309e-06!GO:0006753;nucleoside phosphate metabolic process;8.57176460731309e-06!GO:0031988;membrane-bound vesicle;1.01748880947272e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.07846826610284e-05!GO:0016740;transferase activity;1.08013320947097e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.14499880859575e-05!GO:0005762;mitochondrial large ribosomal subunit;1.16815115718748e-05!GO:0000315;organellar large ribosomal subunit;1.16815115718748e-05!GO:0000776;kinetochore;1.25195904360794e-05!GO:0051325;interphase;1.38608876765972e-05!GO:0048475;coated membrane;1.38966861595594e-05!GO:0030117;membrane coat;1.38966861595594e-05!GO:0000075;cell cycle checkpoint;1.44961113688973e-05!GO:0003924;GTPase activity;1.57332274658249e-05!GO:0007005;mitochondrion organization and biogenesis;1.59962601329813e-05!GO:0051168;nuclear export;1.62574848551606e-05!GO:0006752;group transfer coenzyme metabolic process;1.69747920724811e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.70480425736785e-05!GO:0005789;endoplasmic reticulum membrane;1.71990196591323e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.71990196591323e-05!GO:0003729;mRNA binding;1.71990196591323e-05!GO:0007059;chromosome segregation;1.74031519485458e-05!GO:0006302;double-strand break repair;1.90969877246643e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.07949373211097e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;2.50215901630907e-05!GO:0005657;replication fork;2.62600223446263e-05!GO:0003684;damaged DNA binding;2.69831938107145e-05!GO:0044452;nucleolar part;3.01590697609386e-05!GO:0016564;transcription repressor activity;3.06975519681531e-05!GO:0005525;GTP binding;3.2751864046612e-05!GO:0000314;organellar small ribosomal subunit;3.65196284590871e-05!GO:0005763;mitochondrial small ribosomal subunit;3.65196284590871e-05!GO:0008033;tRNA processing;3.65692514312769e-05!GO:0003678;DNA helicase activity;3.91420196605242e-05!GO:0043681;protein import into mitochondrion;4.02034753588046e-05!GO:0008017;microtubule binding;4.09023306950321e-05!GO:0009108;coenzyme biosynthetic process;4.11884327376871e-05!GO:0016853;isomerase activity;4.36092640444593e-05!GO:0009055;electron carrier activity;4.7112970924375e-05!GO:0043021;ribonucleoprotein binding;4.8022081953219e-05!GO:0006383;transcription from RNA polymerase III promoter;4.83025052904647e-05!GO:0008186;RNA-dependent ATPase activity;4.94451724950373e-05!GO:0031982;vesicle;6.25165983571425e-05!GO:0008654;phospholipid biosynthetic process;6.65876659295757e-05!GO:0044440;endosomal part;7.20090986513445e-05!GO:0010008;endosome membrane;7.20090986513445e-05!GO:0031410;cytoplasmic vesicle;7.26154247546448e-05!GO:0006352;transcription initiation;7.26154247546448e-05!GO:0045786;negative regulation of progression through cell cycle;8.92672719970495e-05!GO:0006310;DNA recombination;0.000112111023715818!GO:0000059;protein import into nucleus, docking;0.000119459753937249!GO:0000786;nucleosome;0.000125417102961696!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000126372378046746!GO:0006606;protein import into nucleus;0.000150172580363055!GO:0000049;tRNA binding;0.000157596295769099!GO:0007010;cytoskeleton organization and biogenesis;0.000161406120435323!GO:0004004;ATP-dependent RNA helicase activity;0.000161406120435323!GO:0032561;guanyl ribonucleotide binding;0.00016419744860426!GO:0019001;guanyl nucleotide binding;0.00016419744860426!GO:0051087;chaperone binding;0.00016795532061252!GO:0006099;tricarboxylic acid cycle;0.000171835457265243!GO:0046356;acetyl-CoA catabolic process;0.000171835457265243!GO:0005876;spindle microtubule;0.000190827366901325!GO:0046474;glycerophospholipid biosynthetic process;0.000193537263088761!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000204897909354041!GO:0003714;transcription corepressor activity;0.000210690551572838!GO:0009109;coenzyme catabolic process;0.000215162482310604!GO:0016251;general RNA polymerase II transcription factor activity;0.000216272597502381!GO:0016563;transcription activator activity;0.000220615819534752!GO:0051170;nuclear import;0.000230183499063698!GO:0006338;chromatin remodeling;0.000233979330583782!GO:0030521;androgen receptor signaling pathway;0.000237845505582155!GO:0008276;protein methyltransferase activity;0.000241874551450837!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000249419352134521!GO:0009117;nucleotide metabolic process;0.000269873963729244!GO:0016859;cis-trans isomerase activity;0.000286553850157248!GO:0030120;vesicle coat;0.000298092813726911!GO:0030662;coated vesicle membrane;0.000298092813726911!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000314809992980579!GO:0006414;translational elongation;0.000319367427572755!GO:0005768;endosome;0.000320267371454026!GO:0000228;nuclear chromosome;0.000328821181653496!GO:0000792;heterochromatin;0.000329645422571339!GO:0006084;acetyl-CoA metabolic process;0.000350450372335226!GO:0005798;Golgi-associated vesicle;0.000375877937334009!GO:0048471;perinuclear region of cytoplasm;0.000402996415504513!GO:0005875;microtubule associated complex;0.000414273602152396!GO:0035258;steroid hormone receptor binding;0.000428054421866926!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.000429032711828662!GO:0031072;heat shock protein binding;0.000505950143088983!GO:0030880;RNA polymerase complex;0.000523433662341439!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000528154224294433!GO:0032940;secretion by cell;0.000578633070754037!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000578633070754037!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000604058111340199!GO:0051187;cofactor catabolic process;0.000644256136530375!GO:0005788;endoplasmic reticulum lumen;0.000649445601066285!GO:0032508;DNA duplex unwinding;0.000663015249871675!GO:0032392;DNA geometric change;0.000663015249871675!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000725327270130468!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000736037744588119!GO:0006891;intra-Golgi vesicle-mediated transport;0.000757231732556611!GO:0008250;oligosaccharyl transferase complex;0.00076507032560712!GO:0048500;signal recognition particle;0.000787898648192603!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000821906853444431!GO:0006612;protein targeting to membrane;0.000830186854712403!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000830186854712403!GO:0032259;methylation;0.000848114387784726!GO:0007052;mitotic spindle organization and biogenesis;0.000923992622127518!GO:0003711;transcription elongation regulator activity;0.000954735754006734!GO:0046489;phosphoinositide biosynthetic process;0.000965508477227397!GO:0031324;negative regulation of cellular metabolic process;0.000972887827124461!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00101101171337725!GO:0032200;telomere organization and biogenesis;0.00101101171337725!GO:0000723;telomere maintenance;0.00101101171337725!GO:0004576;oligosaccharyl transferase activity;0.00102769648823216!GO:0006626;protein targeting to mitochondrion;0.00114684841626585!GO:0003746;translation elongation factor activity;0.00120093441093449!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0012027147259635!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00120428972216036!GO:0000428;DNA-directed RNA polymerase complex;0.00120428972216036!GO:0006405;RNA export from nucleus;0.00127807016339322!GO:0007006;mitochondrial membrane organization and biogenesis;0.00128350348010974!GO:0006793;phosphorus metabolic process;0.00130397805689891!GO:0006796;phosphate metabolic process;0.00130397805689891!GO:0009892;negative regulation of metabolic process;0.00131784615028523!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0014445093473152!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0014445093473152!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0014445093473152!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00148523643009334!GO:0005770;late endosome;0.00149913701318838!GO:0005684;U2-dependent spliceosome;0.00151308105146721!GO:0004527;exonuclease activity;0.00152656016567993!GO:0046467;membrane lipid biosynthetic process;0.00153275157128029!GO:0044450;microtubule organizing center part;0.00160183847091949!GO:0051052;regulation of DNA metabolic process;0.00160925309497322!GO:0007004;telomere maintenance via telomerase;0.00162521133998672!GO:0008022;protein C-terminus binding;0.00163491570788094!GO:0008312;7S RNA binding;0.00165042625665535!GO:0030384;phosphoinositide metabolic process;0.00167364771749684!GO:0019783;small conjugating protein-specific protease activity;0.00173757781641189!GO:0008287;protein serine/threonine phosphatase complex;0.00174256106732226!GO:0016481;negative regulation of transcription;0.00191997324429657!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0020319398505144!GO:0051246;regulation of protein metabolic process;0.00206870443369864!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00212894515190599!GO:0006268;DNA unwinding during replication;0.00215372195892979!GO:0006289;nucleotide-excision repair;0.00247304185266699!GO:0004843;ubiquitin-specific protease activity;0.0025507010931246!GO:0005048;signal sequence binding;0.00259327438177683!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0026593651440134!GO:0045047;protein targeting to ER;0.0026593651440134!GO:0006650;glycerophospholipid metabolic process;0.00277670238598557!GO:0051920;peroxiredoxin activity;0.0027991078824657!GO:0007093;mitotic cell cycle checkpoint;0.0028363173743827!GO:0005637;nuclear inner membrane;0.00291658888207838!GO:0018196;peptidyl-asparagine modification;0.00295701574329632!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00295701574329632!GO:0030518;steroid hormone receptor signaling pathway;0.00295701574329632!GO:0004221;ubiquitin thiolesterase activity;0.00295701574329632!GO:0000209;protein polyubiquitination;0.00295701574329632!GO:0006378;mRNA polyadenylation;0.00298065285073517!GO:0016584;nucleosome positioning;0.00304922147979175!GO:0016272;prefoldin complex;0.00312626646663054!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00314601552709179!GO:0000082;G1/S transition of mitotic cell cycle;0.00314603461285317!GO:0009165;nucleotide biosynthetic process;0.00320636554891051!GO:0045454;cell redox homeostasis;0.00322228248139898!GO:0033116;ER-Golgi intermediate compartment membrane;0.00347758313211798!GO:0031124;mRNA 3'-end processing;0.0034793220446745!GO:0004674;protein serine/threonine kinase activity;0.00350342972757244!GO:0009116;nucleoside metabolic process;0.00350342972757244!GO:0006839;mitochondrial transport;0.00354635973764977!GO:0006284;base-excision repair;0.00358067060401647!GO:0008139;nuclear localization sequence binding;0.00360982627199333!GO:0006400;tRNA modification;0.00376611077523278!GO:0006611;protein export from nucleus;0.00382620577191773!GO:0042054;histone methyltransferase activity;0.00382620577191773!GO:0009056;catabolic process;0.0038802343363173!GO:0016279;protein-lysine N-methyltransferase activity;0.00390228802408415!GO:0018024;histone-lysine N-methyltransferase activity;0.00390228802408415!GO:0016278;lysine N-methyltransferase activity;0.00390228802408415!GO:0030176;integral to endoplasmic reticulum membrane;0.00391849063262281!GO:0050681;androgen receptor binding;0.0039401427595929!GO:0008652;amino acid biosynthetic process;0.00413397787031765!GO:0004003;ATP-dependent DNA helicase activity;0.00414851423336835!GO:0030134;ER to Golgi transport vesicle;0.00422120323452782!GO:0007018;microtubule-based movement;0.0044478641534854!GO:0043414;biopolymer methylation;0.00483080107808579!GO:0000910;cytokinesis;0.0049062326126779!GO:0006505;GPI anchor metabolic process;0.00492387816054055!GO:0006278;RNA-dependent DNA replication;0.00500544929216355!GO:0005669;transcription factor TFIID complex;0.00504111122253226!GO:0007019;microtubule depolymerization;0.00523068760620492!GO:0005839;proteasome core complex (sensu Eukaryota);0.00540274286479939!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00546079990651363!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00546079990651363!GO:0004518;nuclease activity;0.00547655361708282!GO:0000339;RNA cap binding;0.00562287843088511!GO:0051789;response to protein stimulus;0.00572410472279461!GO:0006986;response to unfolded protein;0.00572410472279461!GO:0031123;RNA 3'-end processing;0.00586231881475933!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00601986364603314!GO:0016790;thiolester hydrolase activity;0.00608906746799081!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00624511427648103!GO:0000725;recombinational repair;0.00625437573581275!GO:0000724;double-strand break repair via homologous recombination;0.00625437573581275!GO:0016310;phosphorylation;0.00625437573581275!GO:0030135;coated vesicle;0.00632506727357427!GO:0000096;sulfur amino acid metabolic process;0.00658759187624329!GO:0065007;biological regulation;0.00659738882420319!GO:0019843;rRNA binding;0.00659825920396918!GO:0031570;DNA integrity checkpoint;0.00680817785919448!GO:0000922;spindle pole;0.00680817785919448!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00684727927825707!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00684727927825707!GO:0015399;primary active transmembrane transporter activity;0.00684727927825707!GO:0030663;COPI coated vesicle membrane;0.00684727927825707!GO:0030126;COPI vesicle coat;0.00684727927825707!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00685082938240479!GO:0015002;heme-copper terminal oxidase activity;0.00685082938240479!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00685082938240479!GO:0004129;cytochrome-c oxidase activity;0.00685082938240479!GO:0005758;mitochondrial intermembrane space;0.00688255124108641!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0069759173639504!GO:0030127;COPII vesicle coat;0.00710432757672867!GO:0012507;ER to Golgi transport vesicle membrane;0.00710432757672867!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00713154964208203!GO:0006984;ER-nuclear signaling pathway;0.00721000704828308!GO:0040029;regulation of gene expression, epigenetic;0.00738100200758701!GO:0000781;chromosome, telomeric region;0.00738100200758701!GO:0030137;COPI-coated vesicle;0.0074372025107313!GO:0008170;N-methyltransferase activity;0.00749456921855432!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00777210408660158!GO:0006506;GPI anchor biosynthetic process;0.00798201758752305!GO:0009451;RNA modification;0.00802879602452353!GO:0048487;beta-tubulin binding;0.00839764458216903!GO:0008097;5S rRNA binding;0.00846441440528267!GO:0005832;chaperonin-containing T-complex;0.00849738499325656!GO:0005869;dynactin complex;0.00855401561859102!GO:0051539;4 iron, 4 sulfur cluster binding;0.0086109840049095!GO:0003702;RNA polymerase II transcription factor activity;0.00871083629803439!GO:0008180;signalosome;0.0087141377252208!GO:0043022;ribosome binding;0.00926081359341773!GO:0006402;mRNA catabolic process;0.00960535194585444!GO:0006607;NLS-bearing substrate import into nucleus;0.00972397406858375!GO:0003730;mRNA 3'-UTR binding;0.00992490740803039!GO:0044454;nuclear chromosome part;0.0102201826794844!GO:0000287;magnesium ion binding;0.0102903028020544!GO:0005769;early endosome;0.0105122773125676!GO:0006376;mRNA splice site selection;0.0105949388143927!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0105949388143927!GO:0031902;late endosome membrane;0.0106047099896909!GO:0007088;regulation of mitosis;0.0106102771352039!GO:0031970;organelle envelope lumen;0.0106459620191499!GO:0006595;polyamine metabolic process;0.0107692536691419!GO:0006730;one-carbon compound metabolic process;0.0108682238406447!GO:0004298;threonine endopeptidase activity;0.0111024554305784!GO:0015980;energy derivation by oxidation of organic compounds;0.0113101488254839!GO:0046966;thyroid hormone receptor binding;0.0115043256111532!GO:0019887;protein kinase regulator activity;0.011683880939631!GO:0000097;sulfur amino acid biosynthetic process;0.0119120510394676!GO:0000152;nuclear ubiquitin ligase complex;0.0124198941666991!GO:0007569;cell aging;0.0124198941666991!GO:0030496;midbody;0.0127288474302987!GO:0046128;purine ribonucleoside metabolic process;0.0128261906937204!GO:0042278;purine nucleoside metabolic process;0.0128261906937204!GO:0016585;chromatin remodeling complex;0.0130742825763362!GO:0004722;protein serine/threonine phosphatase activity;0.0131426767867661!GO:0043631;RNA polyadenylation;0.0132630648366058!GO:0030867;rough endoplasmic reticulum membrane;0.0133865584814703!GO:0005881;cytoplasmic microtubule;0.0135108954093926!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0137540675122538!GO:0006144;purine base metabolic process;0.0141260770483605!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.014784844070413!GO:0000123;histone acetyltransferase complex;0.0149921211489297!GO:0043189;H4/H2A histone acetyltransferase complex;0.015014596325602!GO:0031301;integral to organelle membrane;0.015284904024449!GO:0004532;exoribonuclease activity;0.0152908264547243!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0152908264547243!GO:0030145;manganese ion binding;0.0154871578197625!GO:0031114;regulation of microtubule depolymerization;0.0154871578197625!GO:0007026;negative regulation of microtubule depolymerization;0.0154871578197625!GO:0042393;histone binding;0.0157059207541678!GO:0006301;postreplication repair;0.0157777626801964!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0158014561183545!GO:0045039;protein import into mitochondrial inner membrane;0.0158014561183545!GO:0000790;nuclear chromatin;0.015888951441997!GO:0006497;protein amino acid lipidation;0.0159488571672236!GO:0005853;eukaryotic translation elongation factor 1 complex;0.016185272888286!GO:0030522;intracellular receptor-mediated signaling pathway;0.0168267588060468!GO:0007021;tubulin folding;0.0171234121590556!GO:0019899;enzyme binding;0.0173603002244411!GO:0000178;exosome (RNase complex);0.0174528431406763!GO:0006270;DNA replication initiation;0.0177403521167374!GO:0000726;non-recombinational repair;0.0179037567876449!GO:0015992;proton transport;0.0182050149388522!GO:0005741;mitochondrial outer membrane;0.0183387254434977!GO:0051540;metal cluster binding;0.0183387254434977!GO:0051536;iron-sulfur cluster binding;0.0183387254434977!GO:0045892;negative regulation of transcription, DNA-dependent;0.0186020953833753!GO:0006401;RNA catabolic process;0.0186743648456179!GO:0016569;covalent chromatin modification;0.0187865352816629!GO:0005720;nuclear heterochromatin;0.0188515713884581!GO:0051287;NAD binding;0.0194743247152765!GO:0006818;hydrogen transport;0.0203557218615454!GO:0042809;vitamin D receptor binding;0.020699227211071!GO:0000819;sister chromatid segregation;0.0207080954958422!GO:0000118;histone deacetylase complex;0.0208334048792865!GO:0006220;pyrimidine nucleotide metabolic process;0.021008686432479!GO:0035267;NuA4 histone acetyltransferase complex;0.021305526897345!GO:0051128;regulation of cellular component organization and biogenesis;0.0217590274272369!GO:0000930;gamma-tubulin complex;0.0219790004031451!GO:0042770;DNA damage response, signal transduction;0.022218444146616!GO:0004523;ribonuclease H activity;0.0223749467478451!GO:0003756;protein disulfide isomerase activity;0.0234050031115476!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0234050031115476!GO:0043596;nuclear replication fork;0.0237015949272066!GO:0043284;biopolymer biosynthetic process;0.0239793341224504!GO:0009070;serine family amino acid biosynthetic process;0.024339211839634!GO:0000077;DNA damage checkpoint;0.0248207827981117!GO:0005784;translocon complex;0.0258199416956583!GO:0030118;clathrin coat;0.0268291977453357!GO:0008213;protein amino acid alkylation;0.0269317321936101!GO:0006479;protein amino acid methylation;0.0269317321936101!GO:0019867;outer membrane;0.0274798524210469!GO:0042585;germinal vesicle;0.0277715037815428!GO:0031901;early endosome membrane;0.0290628754684428!GO:0043624;cellular protein complex disassembly;0.0295164058300784!GO:0005905;coated pit;0.0307979184323479!GO:0016787;hydrolase activity;0.0314515560270678!GO:0019207;kinase regulator activity;0.0317345225286692!GO:0006406;mRNA export from nucleus;0.031873180475326!GO:0000070;mitotic sister chromatid segregation;0.0319020739251642!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0319443444633385!GO:0032984;macromolecular complex disassembly;0.0324056874157394!GO:0031968;organelle outer membrane;0.0326838351269493!GO:0031371;ubiquitin conjugating enzyme complex;0.0332983767961343!GO:0045947;negative regulation of translational initiation;0.034971336155078!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0351351122724986!GO:0016311;dephosphorylation;0.0352267887870105!GO:0022884;macromolecule transmembrane transporter activity;0.0361419368575119!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0361419368575119!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0364140720353568!GO:0005844;polysome;0.0382589063449038!GO:0007050;cell cycle arrest;0.038389765728218!GO:0045502;dynein binding;0.0384856905595094!GO:0000805;X chromosome;0.0389784904175782!GO:0001740;Barr body;0.0389784904175782!GO:0030658;transport vesicle membrane;0.0396503337794206!GO:0005680;anaphase-promoting complex;0.0402580258400269!GO:0017134;fibroblast growth factor binding;0.0404369162251536!GO:0009112;nucleobase metabolic process;0.0406744640680675!GO:0008320;protein transmembrane transporter activity;0.0413451276767719!GO:0032039;integrator complex;0.0416624623223206!GO:0017119;Golgi transport complex;0.0417649130335094!GO:0051297;centrosome organization and biogenesis;0.0425863957184271!GO:0031023;microtubule organizing center organization and biogenesis;0.0425863957184271!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0437459538216149!GO:0048489;synaptic vesicle transport;0.0437459538216149!GO:0050773;regulation of dendrite development;0.0441398091190957!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0444350733665288!GO:0030983;mismatched DNA binding;0.044549184856952!GO:0000793;condensed chromosome;0.0445572380296865!GO:0030742;GTP-dependent protein binding;0.0446767340856585!GO:0009303;rRNA transcription;0.0447071216215393!GO:0043492;ATPase activity, coupled to movement of substances;0.0448206014784129!GO:0006564;L-serine biosynthetic process;0.0454635167316118!GO:0016570;histone modification;0.045635250476082!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0472209453245853!GO:0010257;NADH dehydrogenase complex assembly;0.0472209453245853!GO:0033108;mitochondrial respiratory chain complex assembly;0.0472209453245853!GO:0048523;negative regulation of cellular process;0.0472411811612772!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0477350635135644!GO:0005732;small nucleolar ribonucleoprotein complex;0.0477350635135644!GO:0042158;lipoprotein biosynthetic process;0.0482049179022556!GO:0005851;eukaryotic translation initiation factor 2B complex;0.0491058087089217!GO:0022406;membrane docking;0.0494123530214103!GO:0048278;vesicle docking;0.0494123530214103!GO:0008408;3'-5' exonuclease activity;0.0496694720748015!GO:0004239;methionyl aminopeptidase activity;0.0499412607828914 | |||
|sample_id=10508 | |sample_id=10508 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 103: | ||
|sample_tissue=adrenal gland | |sample_tissue=adrenal gland | ||
|top_motifs=NANOG:3.28189506867;AHR_ARNT_ARNT2:2.84583300352;YY1:2.53935277457;BREu{core}:2.22815425639;POU6F1:2.21516437614;POU1F1:2.13093653615;FOXM1:2.05223480301;ZNF143:1.99906029401;STAT1,3:1.92970435234;PITX1..3:1.92274490106;LHX3,4:1.89962262085;PRRX1,2:1.89924766956;FOXP1:1.89632669697;ADNP_IRX_SIX_ZHX:1.8913665302;NRF1:1.88237086039;ELK1,4_GABP{A,B1}:1.85184774936;LEF1_TCF7_TCF7L1,2:1.84076983831;NKX6-1,2:1.72792726903;CDC5L:1.63178778191;NFY{A,B,C}:1.62016651912;PATZ1:1.61486912814;CRX:1.53077110486;CUX2:1.52524585891;GFI1:1.51075615073;SOX17:1.49881433202;FOX{I1,J2}:1.41947663102;NHLH1,2:1.40730533163;ZFP161:1.38770109017;SOX2:1.37150247076;OCT4_SOX2{dimer}:1.34763953815;TFDP1:1.34008303657;TOPORS:1.28719110893;E2F1..5:1.2823161337;MED-1{core}:1.25575921686;SOX{8,9,10}:1.24132448529;ARID5B:1.22029243298;MZF1:1.20622764795;AIRE:1.19227185332;NKX2-3_NKX2-5:1.12395560669;bHLH_family:1.11513470701;FOXA2:1.10838714905;RREB1:1.10773215398;ZIC1..3:1.07609318691;PAX3,7:1.04605801596;PAX4:1.0303212575;PAX5:1.00676536343;JUN:0.981632043962;RFX1:0.950924146551;RFX2..5_RFXANK_RFXAP:0.950862476668;REST:0.94005597358;VSX1,2:0.938144143518;TAL1_TCF{3,4,12}:0.921958616244;POU3F1..4:0.919319937258;HOXA9_MEIS1:0.897194622995;NKX2-1,4:0.879177496499;MTE{core}:0.878213013424;CREB1:0.850034018604;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.798643835174;TFAP2B:0.788109385586;GTF2I:0.763290374898;EVI1:0.723213958275;EGR1..3:0.713190023045;RBPJ:0.687386567627;ATF2:0.679090191485;RORA:0.672293181307;NR1H4:0.654174617559;ONECUT1,2:0.580041210481;MYB:0.545427600848;ATF4:0.540835904489;HIC1:0.511828955013;CDX1,2,4:0.49183434999;ATF5_CREB3:0.490408857936;GFI1B:0.479498071779;PAX6:0.477421847163;EN1,2:0.470225533491;TGIF1:0.462590820245;ZBTB16:0.46225970839;PAX1,9:0.460766263921;SOX5:0.451048312304;MYFfamily:0.434900579795;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.383614059801;BPTF:0.344995724887;PRDM1:0.34449098719;CEBPA,B_DDIT3:0.282978942265;MAZ:0.253488877032;PDX1:0.243431326717;GATA6:0.227906575016;ZNF384:0.182384633734;PBX1:0.174178591751;DBP:0.173110022533;ESRRA:0.159145808025;RXR{A,B,G}:0.142775856914;FOXD3:0.102409711878;POU2F1..3:0.0641839032569;TEF:0.0565475472658;HAND1,2:0.0531189383593;GATA4:0.0399218813271;MYOD1:0.0363091503404;HOX{A5,B5}:0.0343899054768;NR6A1:0.0255729976406;ZBTB6:0.0209554227928;HNF1A:-0.0132496604133;ZNF423:-0.0220952114417;PPARG:-0.0965398342734;MEF2{A,B,C,D}:-0.12227302406;HOX{A6,A7,B6,B7}:-0.122495677343;MYBL2:-0.12481474422;FOXL1:-0.133650601053;GTF2A1,2:-0.165890640926;FOXN1:-0.178033181417;HOX{A4,D4}:-0.182365186094;HIF1A:-0.190508216998;PAX8:-0.193958813961;KLF4:-0.200987915332;HBP1_HMGB_SSRP1_UBTF:-0.214890588217;SREBF1,2:-0.225693666435;FOXP3:-0.24388928509;POU5F1:-0.245745013214;HLF:-0.256730649443;TP53:-0.27498321889;ZEB1:-0.315417381523;STAT5{A,B}:-0.316713136703;NKX3-1:-0.341682778814;XCPE1{core}:-0.360970498519;LMO2:-0.379158268343;FOX{F1,F2,J1}:-0.380182329394;SMAD1..7,9:-0.381730709945;ALX1:-0.398284334101;AR:-0.406175622946;NR3C1:-0.420118544873;FOSL2:-0.421931047157;ELF1,2,4:-0.438076042644;NFIX:-0.447338779862;MTF1:-0.465902488245;NANOG{mouse}:-0.49316927708;NKX2-2,8:-0.504809722961;TBX4,5:-0.505520553121;PAX2:-0.508492982973;HMGA1,2:-0.533183431963;FOXQ1:-0.575923400416;SNAI1..3:-0.602200219119;NFIL3:-0.634302545173;IKZF2:-0.672207468766;NR5A1,2:-0.675150841274;NFKB1_REL_RELA:-0.683759788753;EP300:-0.687681572652;FOS_FOS{B,L1}_JUN{B,D}:-0.708165457188;UFEwm:-0.714068295594;HES1:-0.717080776056;NFE2:-0.720843639285;TLX1..3_NFIC{dimer}:-0.727533766935;DMAP1_NCOR{1,2}_SMARC:-0.729535812462;SPIB:-0.750416319112;BACH2:-0.767288535197;GZF1:-0.769869173983;HNF4A_NR2F1,2:-0.782638624189;ZNF148:-0.784954946448;T:-0.785559546372;NFE2L2:-0.795830062798;XBP1:-0.800066468367;RUNX1..3:-0.80202523952;SPI1:-0.853975335608;ATF6:-0.856371854416;FOX{D1,D2}:-0.901822345069;TFAP2{A,C}:-0.919938049036;NFE2L1:-0.951863556822;ETS1,2:-1.01834555481;NKX3-2:-1.03100151098;MAFB:-1.06698887245;TEAD1:-1.09769773781;ZNF238:-1.13670107806;TBP:-1.17607771183;NFATC1..3:-1.18827033177;SP1:-1.21388167455;IKZF1:-1.28676163872;FOXO1,3,4:-1.37618894968;IRF1,2:-1.41814709549;EBF1:-1.45674322666;TFAP4:-1.46254509387;IRF7:-1.47962293385;ESR1:-1.57088342769;TLX2:-1.57438551072;GCM1,2:-1.58017462112;HMX1:-1.60965014857;SPZ1:-1.62134890823;GLI1..3:-1.62206108778;ALX4:-1.68883745755;SRF:-1.82022966594;HSF1,2:-1.96491822015;TFCP2:-1.98502961508;STAT2,4,6:-2.03557153708;RXRA_VDR{dimer}:-2.0744041141 | |top_motifs=NANOG:3.28189506867;AHR_ARNT_ARNT2:2.84583300352;YY1:2.53935277457;BREu{core}:2.22815425639;POU6F1:2.21516437614;POU1F1:2.13093653615;FOXM1:2.05223480301;ZNF143:1.99906029401;STAT1,3:1.92970435234;PITX1..3:1.92274490106;LHX3,4:1.89962262085;PRRX1,2:1.89924766956;FOXP1:1.89632669697;ADNP_IRX_SIX_ZHX:1.8913665302;NRF1:1.88237086039;ELK1,4_GABP{A,B1}:1.85184774936;LEF1_TCF7_TCF7L1,2:1.84076983831;NKX6-1,2:1.72792726903;CDC5L:1.63178778191;NFY{A,B,C}:1.62016651912;PATZ1:1.61486912814;CRX:1.53077110486;CUX2:1.52524585891;GFI1:1.51075615073;SOX17:1.49881433202;FOX{I1,J2}:1.41947663102;NHLH1,2:1.40730533163;ZFP161:1.38770109017;SOX2:1.37150247076;OCT4_SOX2{dimer}:1.34763953815;TFDP1:1.34008303657;TOPORS:1.28719110893;E2F1..5:1.2823161337;MED-1{core}:1.25575921686;SOX{8,9,10}:1.24132448529;ARID5B:1.22029243298;MZF1:1.20622764795;AIRE:1.19227185332;NKX2-3_NKX2-5:1.12395560669;bHLH_family:1.11513470701;FOXA2:1.10838714905;RREB1:1.10773215398;ZIC1..3:1.07609318691;PAX3,7:1.04605801596;PAX4:1.0303212575;PAX5:1.00676536343;JUN:0.981632043962;RFX1:0.950924146551;RFX2..5_RFXANK_RFXAP:0.950862476668;REST:0.94005597358;VSX1,2:0.938144143518;TAL1_TCF{3,4,12}:0.921958616244;POU3F1..4:0.919319937258;HOXA9_MEIS1:0.897194622995;NKX2-1,4:0.879177496499;MTE{core}:0.878213013424;CREB1:0.850034018604;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.798643835174;TFAP2B:0.788109385586;GTF2I:0.763290374898;EVI1:0.723213958275;EGR1..3:0.713190023045;RBPJ:0.687386567627;ATF2:0.679090191485;RORA:0.672293181307;NR1H4:0.654174617559;ONECUT1,2:0.580041210481;MYB:0.545427600848;ATF4:0.540835904489;HIC1:0.511828955013;CDX1,2,4:0.49183434999;ATF5_CREB3:0.490408857936;GFI1B:0.479498071779;PAX6:0.477421847163;EN1,2:0.470225533491;TGIF1:0.462590820245;ZBTB16:0.46225970839;PAX1,9:0.460766263921;SOX5:0.451048312304;MYFfamily:0.434900579795;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.383614059801;BPTF:0.344995724887;PRDM1:0.34449098719;CEBPA,B_DDIT3:0.282978942265;MAZ:0.253488877032;PDX1:0.243431326717;GATA6:0.227906575016;ZNF384:0.182384633734;PBX1:0.174178591751;DBP:0.173110022533;ESRRA:0.159145808025;RXR{A,B,G}:0.142775856914;FOXD3:0.102409711878;POU2F1..3:0.0641839032569;TEF:0.0565475472658;HAND1,2:0.0531189383593;GATA4:0.0399218813271;MYOD1:0.0363091503404;HOX{A5,B5}:0.0343899054768;NR6A1:0.0255729976406;ZBTB6:0.0209554227928;HNF1A:-0.0132496604133;ZNF423:-0.0220952114417;PPARG:-0.0965398342734;MEF2{A,B,C,D}:-0.12227302406;HOX{A6,A7,B6,B7}:-0.122495677343;MYBL2:-0.12481474422;FOXL1:-0.133650601053;GTF2A1,2:-0.165890640926;FOXN1:-0.178033181417;HOX{A4,D4}:-0.182365186094;HIF1A:-0.190508216998;PAX8:-0.193958813961;KLF4:-0.200987915332;HBP1_HMGB_SSRP1_UBTF:-0.214890588217;SREBF1,2:-0.225693666435;FOXP3:-0.24388928509;POU5F1:-0.245745013214;HLF:-0.256730649443;TP53:-0.27498321889;ZEB1:-0.315417381523;STAT5{A,B}:-0.316713136703;NKX3-1:-0.341682778814;XCPE1{core}:-0.360970498519;LMO2:-0.379158268343;FOX{F1,F2,J1}:-0.380182329394;SMAD1..7,9:-0.381730709945;ALX1:-0.398284334101;AR:-0.406175622946;NR3C1:-0.420118544873;FOSL2:-0.421931047157;ELF1,2,4:-0.438076042644;NFIX:-0.447338779862;MTF1:-0.465902488245;NANOG{mouse}:-0.49316927708;NKX2-2,8:-0.504809722961;TBX4,5:-0.505520553121;PAX2:-0.508492982973;HMGA1,2:-0.533183431963;FOXQ1:-0.575923400416;SNAI1..3:-0.602200219119;NFIL3:-0.634302545173;IKZF2:-0.672207468766;NR5A1,2:-0.675150841274;NFKB1_REL_RELA:-0.683759788753;EP300:-0.687681572652;FOS_FOS{B,L1}_JUN{B,D}:-0.708165457188;UFEwm:-0.714068295594;HES1:-0.717080776056;NFE2:-0.720843639285;TLX1..3_NFIC{dimer}:-0.727533766935;DMAP1_NCOR{1,2}_SMARC:-0.729535812462;SPIB:-0.750416319112;BACH2:-0.767288535197;GZF1:-0.769869173983;HNF4A_NR2F1,2:-0.782638624189;ZNF148:-0.784954946448;T:-0.785559546372;NFE2L2:-0.795830062798;XBP1:-0.800066468367;RUNX1..3:-0.80202523952;SPI1:-0.853975335608;ATF6:-0.856371854416;FOX{D1,D2}:-0.901822345069;TFAP2{A,C}:-0.919938049036;NFE2L1:-0.951863556822;ETS1,2:-1.01834555481;NKX3-2:-1.03100151098;MAFB:-1.06698887245;TEAD1:-1.09769773781;ZNF238:-1.13670107806;TBP:-1.17607771183;NFATC1..3:-1.18827033177;SP1:-1.21388167455;IKZF1:-1.28676163872;FOXO1,3,4:-1.37618894968;IRF1,2:-1.41814709549;EBF1:-1.45674322666;TFAP4:-1.46254509387;IRF7:-1.47962293385;ESR1:-1.57088342769;TLX2:-1.57438551072;GCM1,2:-1.58017462112;HMX1:-1.60965014857;SPZ1:-1.62134890823;GLI1..3:-1.62206108778;ALX4:-1.68883745755;SRF:-1.82022966594;HSF1,2:-1.96491822015;TFCP2:-1.98502961508;STAT2,4,6:-2.03557153708;RXRA_VDR{dimer}:-2.0744041141 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10508-107D4;search_select_hide=table117:FF:10508-107D4 | |||
}} | }} | ||
Latest revision as of 14:27, 3 June 2020
| Name: | neuroblastoma cell line:CHP-134 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11276 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| HumanCAGEScan Download raw sequence, BAM & CTSS | |||||||||||||||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11276
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11276
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.302 |
| 10 | 10 | 0.216 |
| 100 | 100 | 0.929 |
| 101 | 101 | 0.991 |
| 102 | 102 | 0.599 |
| 103 | 103 | 0.0844 |
| 104 | 104 | 0.39 |
| 105 | 105 | 0.661 |
| 106 | 106 | 0.00314 |
| 107 | 107 | 0.00565 |
| 108 | 108 | 0.66 |
| 109 | 109 | 0.0191 |
| 11 | 11 | 0.12 |
| 110 | 110 | 0.301 |
| 111 | 111 | 0.723 |
| 112 | 112 | 0.0655 |
| 113 | 113 | 0.78 |
| 114 | 114 | 0.0327 |
| 115 | 115 | 0.222 |
| 116 | 116 | 0.342 |
| 117 | 117 | 0.241 |
| 118 | 118 | 0.39 |
| 119 | 119 | 0.318 |
| 12 | 12 | 0.468 |
| 120 | 120 | 0.0551 |
| 121 | 121 | 0.906 |
| 122 | 122 | 0.604 |
| 123 | 123 | 0.0548 |
| 124 | 124 | 0.24 |
| 125 | 125 | 0.974 |
| 126 | 126 | 0.117 |
| 127 | 127 | 0.352 |
| 128 | 128 | 0.0336 |
| 129 | 129 | 0.261 |
| 13 | 13 | 0.0898 |
| 130 | 130 | 0.833 |
| 131 | 131 | 0.399 |
| 132 | 132 | 0.727 |
| 133 | 133 | 0.897 |
| 134 | 134 | 0.619 |
| 135 | 135 | 0.275 |
| 136 | 136 | 0.227 |
| 137 | 137 | 0.289 |
| 138 | 138 | 0.771 |
| 139 | 139 | 0.391 |
| 14 | 14 | 0.605 |
| 140 | 140 | 0.245 |
| 141 | 141 | 0.467 |
| 142 | 142 | 0.841 |
| 143 | 143 | 0.165 |
| 144 | 144 | 0.561 |
| 145 | 145 | 0.121 |
| 146 | 146 | 0.733 |
| 147 | 147 | 0.331 |
| 148 | 148 | 0.0339 |
| 149 | 149 | 0.0695 |
| 15 | 15 | 0.211 |
| 150 | 150 | 0.233 |
| 151 | 151 | 0.429 |
| 152 | 152 | 0.0554 |
| 153 | 153 | 0.777 |
| 154 | 154 | 0.952 |
| 155 | 155 | 0.736 |
| 156 | 156 | 0.818 |
| 157 | 157 | 0.236 |
| 158 | 158 | 0.419 |
| 159 | 159 | 0.0934 |
| 16 | 16 | 0.0996 |
| 160 | 160 | 0.12 |
| 161 | 161 | 0.71 |
| 162 | 162 | 0.741 |
| 163 | 163 | 0.16 |
| 164 | 164 | 0.0731 |
| 165 | 165 | 0.289 |
| 166 | 166 | 0.43 |
| 167 | 167 | 0.741 |
| 168 | 168 | 0.0281 |
| 169 | 169 | 0.0147 |
| 17 | 17 | 0.141 |
| 18 | 18 | 0.552 |
| 19 | 19 | 0.0798 |
| 2 | 2 | 0.246 |
| 20 | 20 | 0.962 |
| 21 | 21 | 0.533 |
| 22 | 22 | 0.0888 |
| 23 | 23 | 0.00223 |
| 24 | 24 | 0.162 |
| 25 | 25 | 0.662 |
| 26 | 26 | 0.06 |
| 27 | 27 | 0.265 |
| 28 | 28 | 0.902 |
| 29 | 29 | 0.148 |
| 3 | 3 | 0.141 |
| 30 | 30 | 0.311 |
| 31 | 31 | 0.485 |
| 32 | 32 | 0.00605 |
| 33 | 33 | 0.198 |
| 34 | 34 | 0.551 |
| 35 | 35 | 0.944 |
| 36 | 36 | 0.653 |
| 37 | 37 | 0.126 |
| 38 | 38 | 0.231 |
| 39 | 39 | 0.071 |
| 4 | 4 | 0.364 |
| 40 | 40 | 0.234 |
| 41 | 41 | 0.292 |
| 42 | 42 | 0.73 |
| 43 | 43 | 0.142 |
| 44 | 44 | 0.0662 |
| 45 | 45 | 0.376 |
| 46 | 46 | 0.209 |
| 47 | 47 | 0.525 |
| 48 | 48 | 0.313 |
| 49 | 49 | 0.405 |
| 5 | 5 | 0.161 |
| 50 | 50 | 0.45 |
| 51 | 51 | 0.456 |
| 52 | 52 | 0.0976 |
| 53 | 53 | 0.839 |
| 54 | 54 | 0.31 |
| 55 | 55 | 0.127 |
| 56 | 56 | 0.484 |
| 57 | 57 | 0.834 |
| 58 | 58 | 0.212 |
| 59 | 59 | 0.0309 |
| 6 | 6 | 0.927 |
| 60 | 60 | 0.0105 |
| 61 | 61 | 0.336 |
| 62 | 62 | 0.0945 |
| 63 | 63 | 0.153 |
| 64 | 64 | 0.836 |
| 65 | 65 | 0.13 |
| 66 | 66 | 0.171 |
| 67 | 67 | 0.63 |
| 68 | 68 | 0.75 |
| 69 | 69 | 0.567 |
| 7 | 7 | 0.226 |
| 70 | 70 | 0.0153 |
| 71 | 71 | 0.0734 |
| 72 | 72 | 0.124 |
| 73 | 73 | 0.0288 |
| 74 | 74 | 0.709 |
| 75 | 75 | 0.312 |
| 76 | 76 | 0.963 |
| 77 | 77 | 0.0391 |
| 78 | 78 | 0.125 |
| 79 | 79 | 0.0889 |
| 8 | 8 | 0.153 |
| 80 | 80 | 0.142 |
| 81 | 81 | 0.385 |
| 82 | 82 | 0.0989 |
| 83 | 83 | 0.155 |
| 84 | 84 | 0.435 |
| 85 | 85 | 0.0341 |
| 86 | 86 | 0.567 |
| 87 | 87 | 0.185 |
| 88 | 88 | 0.705 |
| 89 | 89 | 0.0258 |
| 9 | 9 | 0.183 |
| 90 | 90 | 0.701 |
| 91 | 91 | 0.34 |
| 92 | 92 | 0.082 |
| 93 | 93 | 0.873 |
| 94 | 94 | 0.29 |
| 95 | 95 | 0.0952 |
| 96 | 96 | 0.418 |
| 97 | 97 | 0.737 |
| 98 | 98 | 0.339 |
| 99 | 99 | 0.241 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11276
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102989 CHP-134 cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000333 (migratory neural crest cell)
0000003 (native cell)
0000548 (animal cell)
0002321 (embryonic cell)
0000219 (motile cell)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
171 (neuroectodermal tumor)
3095 (germ cell and embryonal cancer)
2994 (germ cell cancer)
169 (neuroendocrine tumor)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000013 (sympathetic nervous system)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0002410 (autonomic nervous system)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0000010 (peripheral nervous system)
0001016 (nervous system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100932 (neuroblastoma cell line sample)
0102989 (CHP-134 cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)
