FF:10539-107G8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005629 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL: | |accession_numbers=CAGE;DRX007961;DRR008833;DRZ000258;DRZ001643;DRZ011608;DRZ012993 | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000013,UBERON:0004121,UBERON:0011216,UBERON:0002410,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0000010,UBERON:0001016 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000333,CL:0000003,CL:0000548,CL:0002321,CL:0000219,CL:0000255 | |||
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:171,DOID:3095,DOID:2994,DOID:169 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100932 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0100932 | |fonse_cell_line=FF:0100932 | ||
|fonse_cell_line_closure=FF:0100932 | |fonse_cell_line_closure=FF:0100932 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aNB-1.CNhs11284.10539-107G8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aNB-1.CNhs11284.10539-107G8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aNB-1.CNhs11284.10539-107G8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aNB-1.CNhs11284.10539-107G8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aNB-1.CNhs11284.10539-107G8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10539-107G8 | |id=FF:10539-107G8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0100932 | ||
|is_obsolete= | |||
|library_id=CNhs11284 | |||
|library_id_phase_based=2:CNhs11284 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10539 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10539 | |||
|name=neuroblastoma cell line:NB-1 | |name=neuroblastoma cell line:NB-1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11284,LSID759,release008,COMPLETED | |profile_hcage=CNhs11284,LSID759,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=107 | |rna_box=107 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=42.70945 | |rna_weight_ug=42.70945 | ||
|sample_age=2 | |sample_age=2 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB1953 | |sample_cell_catalog=RCB1953 | ||
|sample_cell_line=NB-1 | |sample_cell_line=NB-1 | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.20590902909324e-289!GO:0043226;organelle;1.0243024026478e-248!GO:0043229;intracellular organelle;4.57804574776079e-248!GO:0043231;intracellular membrane-bound organelle;3.45378100567322e-244!GO:0043227;membrane-bound organelle;5.6387755080011e-244!GO:0044422;organelle part;7.47298767883955e-166!GO:0044446;intracellular organelle part;1.4627963410178e-164!GO:0005737;cytoplasm;2.5906847175705e-156!GO:0005634;nucleus;5.12293900588708e-128!GO:0032991;macromolecular complex;9.60528349460476e-117!GO:0044444;cytoplasmic part;1.57551969384936e-113!GO:0044237;cellular metabolic process;3.97798424109099e-98!GO:0044238;primary metabolic process;1.84586173387112e-95!GO:0043170;macromolecule metabolic process;1.0689119616457e-93!GO:0030529;ribonucleoprotein complex;1.51125923929845e-92!GO:0044428;nuclear part;1.79429977908695e-91!GO:0043233;organelle lumen;3.83554693538198e-85!GO:0031974;membrane-enclosed lumen;3.83554693538198e-85!GO:0003723;RNA binding;3.2479908674018e-82!GO:0043283;biopolymer metabolic process;4.35370859294421e-71!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.7779530461839e-71!GO:0005739;mitochondrion;7.42464904220975e-66!GO:0010467;gene expression;2.59712444739503e-65!GO:0005515;protein binding;4.19378554425792e-61!GO:0043234;protein complex;1.39576959690289e-60!GO:0006396;RNA processing;2.06380314502774e-58!GO:0031981;nuclear lumen;3.74982310767119e-55!GO:0016043;cellular component organization and biogenesis;1.50906762808381e-54!GO:0003676;nucleic acid binding;1.55833274481433e-54!GO:0005840;ribosome;7.25233801906574e-51!GO:0044429;mitochondrial part;2.48917812295123e-47!GO:0006259;DNA metabolic process;4.08130856471285e-47!GO:0016071;mRNA metabolic process;6.10517142836167e-46!GO:0043228;non-membrane-bound organelle;1.57145601410861e-44!GO:0043232;intracellular non-membrane-bound organelle;1.57145601410861e-44!GO:0006996;organelle organization and biogenesis;2.92328999635558e-44!GO:0031090;organelle membrane;4.44048269128519e-44!GO:0033036;macromolecule localization;1.97127237449623e-43!GO:0003735;structural constituent of ribosome;2.80166376487543e-43!GO:0015031;protein transport;1.01798993689785e-42!GO:0008380;RNA splicing;2.52023147023739e-42!GO:0031967;organelle envelope;3.27236421647283e-42!GO:0031975;envelope;3.30802053276939e-42!GO:0006397;mRNA processing;1.5956080539626e-41!GO:0016070;RNA metabolic process;8.6705360555132e-40!GO:0006412;translation;8.6705360555132e-40!GO:0008104;protein localization;5.80126848582781e-39!GO:0045184;establishment of protein localization;2.4378532240855e-38!GO:0033279;ribosomal subunit;2.47408753821127e-36!GO:0046907;intracellular transport;1.04590658088963e-34!GO:0005654;nucleoplasm;6.13372376768213e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.25532630826896e-32!GO:0009058;biosynthetic process;4.77743984176651e-32!GO:0019538;protein metabolic process;6.585007947208e-31!GO:0044249;cellular biosynthetic process;7.17337795173655e-31!GO:0007049;cell cycle;8.48101368091591e-31!GO:0005681;spliceosome;6.46062834074184e-30!GO:0000166;nucleotide binding;6.72420648398009e-30!GO:0005740;mitochondrial envelope;3.87340433863645e-29!GO:0009059;macromolecule biosynthetic process;3.87698863205462e-29!GO:0065003;macromolecular complex assembly;6.78705103294168e-29!GO:0044267;cellular protein metabolic process;8.0136233518657e-29!GO:0005829;cytosol;8.0136233518657e-29!GO:0006974;response to DNA damage stimulus;8.77954150762588e-29!GO:0006886;intracellular protein transport;1.41417694015099e-28!GO:0044260;cellular macromolecule metabolic process;1.68516779925236e-28!GO:0005694;chromosome;2.94078276399975e-28!GO:0031966;mitochondrial membrane;1.8825135095844e-27!GO:0051649;establishment of cellular localization;2.25412642377364e-26!GO:0051641;cellular localization;4.29909872866845e-26!GO:0022607;cellular component assembly;5.38596026396575e-26!GO:0019866;organelle inner membrane;5.75014411228203e-26!GO:0044451;nucleoplasm part;1.53485318046793e-25!GO:0044427;chromosomal part;4.35326257994675e-25!GO:0006281;DNA repair;5.29003371247286e-25!GO:0000278;mitotic cell cycle;5.79234105042582e-25!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.2302378537277e-24!GO:0005743;mitochondrial inner membrane;6.23523565353367e-24!GO:0051276;chromosome organization and biogenesis;1.3958787271156e-23!GO:0016462;pyrophosphatase activity;2.13004866727761e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.35725483771015e-23!GO:0006119;oxidative phosphorylation;2.47642969171335e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;3.12477243791832e-23!GO:0017111;nucleoside-triphosphatase activity;3.9149471657228e-23!GO:0022402;cell cycle process;4.30850274157993e-23!GO:0005730;nucleolus;1.76588623181706e-22!GO:0044455;mitochondrial membrane part;1.50930176007322e-21!GO:0031980;mitochondrial lumen;2.20759785967244e-21!GO:0005759;mitochondrial matrix;2.20759785967244e-21!GO:0044445;cytosolic part;2.31098697797895e-21!GO:0032553;ribonucleotide binding;6.01976506361101e-21!GO:0032555;purine ribonucleotide binding;6.01976506361101e-21!GO:0006457;protein folding;1.35696795104246e-20!GO:0051301;cell division;2.38762615765281e-20!GO:0000087;M phase of mitotic cell cycle;2.8558181052691e-20!GO:0007067;mitosis;6.39762936796076e-20!GO:0017076;purine nucleotide binding;1.86714859243402e-19!GO:0015935;small ribosomal subunit;1.99627021303303e-19!GO:0006512;ubiquitin cycle;3.31862652263969e-19!GO:0006260;DNA replication;5.31890324792413e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;8.56290740322962e-19!GO:0016874;ligase activity;1.83706739780319e-18!GO:0022403;cell cycle phase;2.11965141412567e-18!GO:0005524;ATP binding;5.42584374421722e-18!GO:0006323;DNA packaging;5.66240910168249e-18!GO:0009719;response to endogenous stimulus;6.39385945331197e-18!GO:0015934;large ribosomal subunit;6.572303885803e-18!GO:0012505;endomembrane system;6.93184389006566e-18!GO:0022618;protein-RNA complex assembly;7.13113800962912e-18!GO:0032559;adenyl ribonucleotide binding;7.77897464653056e-18!GO:0005746;mitochondrial respiratory chain;1.24094477953317e-17!GO:0042623;ATPase activity, coupled;3.14205891708936e-17!GO:0016887;ATPase activity;9.62633603663033e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.52045859407543e-16!GO:0015630;microtubule cytoskeleton;2.90550901684354e-16!GO:0050136;NADH dehydrogenase (quinone) activity;3.60212568117685e-16!GO:0003954;NADH dehydrogenase activity;3.60212568117685e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.60212568117685e-16!GO:0030554;adenyl nucleotide binding;3.64637339742598e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;5.20672749747773e-16!GO:0000375;RNA splicing, via transesterification reactions;5.20672749747773e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.20672749747773e-16!GO:0000279;M phase;9.85528498687992e-16!GO:0005761;mitochondrial ribosome;1.03786011048158e-15!GO:0000313;organellar ribosome;1.03786011048158e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.16575134301116e-15!GO:0019941;modification-dependent protein catabolic process;1.55550450768273e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.55550450768273e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.63483942694556e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.74878290587617e-15!GO:0008135;translation factor activity, nucleic acid binding;1.99092722653633e-15!GO:0044257;cellular protein catabolic process;3.22393230478657e-15!GO:0042254;ribosome biogenesis and assembly;1.23166740450595e-14!GO:0006605;protein targeting;2.33929530202951e-14!GO:0042775;organelle ATP synthesis coupled electron transport;3.01405301335614e-14!GO:0042773;ATP synthesis coupled electron transport;3.01405301335614e-14!GO:0044265;cellular macromolecule catabolic process;3.18695035518171e-14!GO:0004386;helicase activity;3.2911701398944e-14!GO:0031965;nuclear membrane;3.40872132604401e-14!GO:0008134;transcription factor binding;4.74776306263529e-14!GO:0030964;NADH dehydrogenase complex (quinone);5.23882419337552e-14!GO:0045271;respiratory chain complex I;5.23882419337552e-14!GO:0005747;mitochondrial respiratory chain complex I;5.23882419337552e-14!GO:0000785;chromatin;6.10659054760858e-14!GO:0005635;nuclear envelope;6.95552029181863e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.58062234902089e-13!GO:0016604;nuclear body;4.66171772804138e-13!GO:0044453;nuclear membrane part;4.67761811625297e-13!GO:0006333;chromatin assembly or disassembly;6.0181164206922e-13!GO:0016568;chromatin modification;8.46573457870171e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.88202718467894e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.20865471779882e-12!GO:0005794;Golgi apparatus;2.27790978080086e-12!GO:0065004;protein-DNA complex assembly;3.35732618862247e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.39229831299092e-12!GO:0051082;unfolded protein binding;4.66083885274836e-12!GO:0005643;nuclear pore;5.52167236590687e-12!GO:0048770;pigment granule;5.77431699879107e-12!GO:0042470;melanosome;5.77431699879107e-12!GO:0008026;ATP-dependent helicase activity;7.06894182777286e-12!GO:0000775;chromosome, pericentric region;9.90106878384189e-12!GO:0006403;RNA localization;1.04647204141174e-11!GO:0019222;regulation of metabolic process;1.20968800706374e-11!GO:0050657;nucleic acid transport;1.20968800706374e-11!GO:0051236;establishment of RNA localization;1.20968800706374e-11!GO:0050658;RNA transport;1.20968800706374e-11!GO:0043285;biopolymer catabolic process;1.98102539346126e-11!GO:0043412;biopolymer modification;2.1670011112037e-11!GO:0008565;protein transporter activity;2.25891080052998e-11!GO:0051186;cofactor metabolic process;3.78742744988668e-11!GO:0006163;purine nucleotide metabolic process;3.96257666472724e-11!GO:0043566;structure-specific DNA binding;4.18729309186235e-11!GO:0044432;endoplasmic reticulum part;4.18729309186235e-11!GO:0009259;ribonucleotide metabolic process;5.34398158351357e-11!GO:0044248;cellular catabolic process;5.34398158351357e-11!GO:0006350;transcription;5.83906055775625e-11!GO:0006913;nucleocytoplasmic transport;5.93518489796636e-11!GO:0005783;endoplasmic reticulum;6.0655810178002e-11!GO:0006366;transcription from RNA polymerase II promoter;6.14954959282552e-11!GO:0006399;tRNA metabolic process;7.26007585993303e-11!GO:0006413;translational initiation;7.90233846491376e-11!GO:0030163;protein catabolic process;8.29167897812434e-11!GO:0050794;regulation of cellular process;1.01928939850897e-10!GO:0019829;cation-transporting ATPase activity;1.28494272246807e-10!GO:0006364;rRNA processing;1.35903718694413e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.40533791421338e-10!GO:0051169;nuclear transport;1.41648601549687e-10!GO:0003743;translation initiation factor activity;1.42019930366503e-10!GO:0009057;macromolecule catabolic process;1.44105480049149e-10!GO:0003697;single-stranded DNA binding;2.0290000134542e-10!GO:0016607;nuclear speck;2.67086131465437e-10!GO:0005819;spindle;2.78292882453593e-10!GO:0016192;vesicle-mediated transport;2.88712961625277e-10!GO:0006446;regulation of translational initiation;3.03726402768065e-10!GO:0006164;purine nucleotide biosynthetic process;3.03726402768065e-10!GO:0016072;rRNA metabolic process;3.8465626890713e-10!GO:0051726;regulation of cell cycle;4.86149314363911e-10!GO:0000074;regulation of progression through cell cycle;5.77768071274969e-10!GO:0009150;purine ribonucleotide metabolic process;6.00515156277834e-10!GO:0003712;transcription cofactor activity;9.42964901197497e-10!GO:0051028;mRNA transport;1.02660683977728e-09!GO:0065002;intracellular protein transport across a membrane;1.02660683977728e-09!GO:0009260;ribonucleotide biosynthetic process;1.4827675347505e-09!GO:0031323;regulation of cellular metabolic process;1.87283107149435e-09!GO:0046930;pore complex;2.1045088088972e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.15281228210626e-09!GO:0048193;Golgi vesicle transport;2.38601457247789e-09!GO:0006261;DNA-dependent DNA replication;2.52033506855349e-09!GO:0032774;RNA biosynthetic process;2.52033506855349e-09!GO:0006464;protein modification process;2.5873966537356e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.92280458139554e-09!GO:0006351;transcription, DNA-dependent;3.31194595527512e-09!GO:0006334;nucleosome assembly;3.39692827519642e-09!GO:0009141;nucleoside triphosphate metabolic process;4.38210537768562e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.68832570764077e-09!GO:0009199;ribonucleoside triphosphate metabolic process;4.97876327696688e-09!GO:0045333;cellular respiration;5.15476459798851e-09!GO:0005874;microtubule;5.32512660275887e-09!GO:0003677;DNA binding;6.62723715300848e-09!GO:0031497;chromatin assembly;7.28239496435581e-09!GO:0009060;aerobic respiration;7.71540801150164e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.9589506887599e-09!GO:0009144;purine nucleoside triphosphate metabolic process;8.9589506887599e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.15643906362861e-08!GO:0004812;aminoacyl-tRNA ligase activity;1.15643906362861e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.15643906362861e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.15643906362861e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.17313403956147e-08!GO:0006732;coenzyme metabolic process;1.39223364370556e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.46672860902886e-08!GO:0007017;microtubule-based process;1.61011184080253e-08!GO:0043038;amino acid activation;1.67202283952019e-08!GO:0006418;tRNA aminoacylation for protein translation;1.67202283952019e-08!GO:0043039;tRNA aminoacylation;1.67202283952019e-08!GO:0005813;centrosome;1.78920310776599e-08!GO:0015986;ATP synthesis coupled proton transport;1.86276419532821e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.86276419532821e-08!GO:0008639;small protein conjugating enzyme activity;1.86554506011043e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.2420386725485e-08!GO:0046034;ATP metabolic process;2.33670646779476e-08!GO:0043687;post-translational protein modification;3.18827428971215e-08!GO:0004842;ubiquitin-protein ligase activity;3.2716676889798e-08!GO:0015078;hydrogen ion transmembrane transporter activity;3.98489368563094e-08!GO:0010468;regulation of gene expression;4.28157989505246e-08!GO:0005815;microtubule organizing center;4.46263273757665e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.57760253067178e-08!GO:0009142;nucleoside triphosphate biosynthetic process;4.81955565250256e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.81955565250256e-08!GO:0019787;small conjugating protein ligase activity;6.67899215021934e-08!GO:0007051;spindle organization and biogenesis;7.70978180417406e-08!GO:0005789;endoplasmic reticulum membrane;7.86596370286949e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.63311903260399e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.63311903260399e-08!GO:0016469;proton-transporting two-sector ATPase complex;1.22334208590643e-07!GO:0000245;spliceosome assembly;1.43404450861634e-07!GO:0017038;protein import;1.46078191138812e-07!GO:0050789;regulation of biological process;1.49775421992908e-07!GO:0006754;ATP biosynthetic process;1.94589212522276e-07!GO:0006753;nucleoside phosphate metabolic process;1.94589212522276e-07!GO:0045449;regulation of transcription;2.11266465441799e-07!GO:0009055;electron carrier activity;2.94117040886681e-07!GO:0005793;ER-Golgi intermediate compartment;3.86238482879352e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.96123937137315e-07!GO:0045259;proton-transporting ATP synthase complex;5.01248693010454e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;5.03749067455703e-07!GO:0006099;tricarboxylic acid cycle;6.23955331864596e-07!GO:0046356;acetyl-CoA catabolic process;6.23955331864596e-07!GO:0016881;acid-amino acid ligase activity;6.75641505275897e-07!GO:0006355;regulation of transcription, DNA-dependent;7.5264637362413e-07!GO:0000226;microtubule cytoskeleton organization and biogenesis;7.99322569875378e-07!GO:0000776;kinetochore;8.55531502760094e-07!GO:0016779;nucleotidyltransferase activity;9.05523318898986e-07!GO:0008094;DNA-dependent ATPase activity;9.77025578955666e-07!GO:0051188;cofactor biosynthetic process;1.04567939792423e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.06190408422195e-06!GO:0048475;coated membrane;1.22522402338014e-06!GO:0030117;membrane coat;1.22522402338014e-06!GO:0043623;cellular protein complex assembly;1.30099607866059e-06!GO:0006084;acetyl-CoA metabolic process;1.32514576231784e-06!GO:0007005;mitochondrion organization and biogenesis;1.33241979036972e-06!GO:0006752;group transfer coenzyme metabolic process;1.34379186795767e-06!GO:0005667;transcription factor complex;1.60180890495391e-06!GO:0000075;cell cycle checkpoint;1.88581119168387e-06!GO:0003690;double-stranded DNA binding;2.01793084330094e-06!GO:0007010;cytoskeleton organization and biogenesis;2.30400624595106e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.33699023557008e-06!GO:0005839;proteasome core complex (sensu Eukaryota);2.44496083628917e-06!GO:0051329;interphase of mitotic cell cycle;2.45569996507754e-06!GO:0003724;RNA helicase activity;3.11005403479736e-06!GO:0044431;Golgi apparatus part;3.17266607904802e-06!GO:0009109;coenzyme catabolic process;3.17822231865167e-06!GO:0000151;ubiquitin ligase complex;3.55795723239768e-06!GO:0032446;protein modification by small protein conjugation;3.73458629786262e-06!GO:0051325;interphase;4.17381196624967e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.56196529393526e-06!GO:0031988;membrane-bound vesicle;4.6835086532463e-06!GO:0015631;tubulin binding;5.92524492314467e-06!GO:0003682;chromatin binding;6.30442623407834e-06!GO:0016023;cytoplasmic membrane-bound vesicle;6.60653215009285e-06!GO:0003899;DNA-directed RNA polymerase activity;6.66617477487093e-06!GO:0031982;vesicle;6.70251403116132e-06!GO:0016567;protein ubiquitination;8.02106569719813e-06!GO:0051427;hormone receptor binding;8.49989106315554e-06!GO:0016363;nuclear matrix;8.8786287225278e-06!GO:0051187;cofactor catabolic process;8.98412746089201e-06!GO:0006613;cotranslational protein targeting to membrane;9.31747806783808e-06!GO:0006461;protein complex assembly;1.04772988680498e-05!GO:0016740;transferase activity;1.05769855901067e-05!GO:0031410;cytoplasmic vesicle;1.16613503927095e-05!GO:0004298;threonine endopeptidase activity;1.2946241770704e-05!GO:0005657;replication fork;1.35215623639672e-05!GO:0000314;organellar small ribosomal subunit;1.42521509304923e-05!GO:0005763;mitochondrial small ribosomal subunit;1.42521509304923e-05!GO:0003684;damaged DNA binding;1.48205879162883e-05!GO:0008168;methyltransferase activity;1.53177206054419e-05!GO:0016741;transferase activity, transferring one-carbon groups;1.65613420669798e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.77787032701549e-05!GO:0015399;primary active transmembrane transporter activity;1.77787032701549e-05!GO:0006302;double-strand break repair;1.78265362929206e-05!GO:0003713;transcription coactivator activity;1.83507237151229e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.89609104870209e-05!GO:0035257;nuclear hormone receptor binding;1.92542181902755e-05!GO:0048471;perinuclear region of cytoplasm;2.08389522456565e-05!GO:0051168;nuclear export;2.21389606875065e-05!GO:0009117;nucleotide metabolic process;2.28395389285943e-05!GO:0009108;coenzyme biosynthetic process;2.29198629988505e-05!GO:0007059;chromosome segregation;2.29246734851683e-05!GO:0030120;vesicle coat;2.6560010469197e-05!GO:0030662;coated vesicle membrane;2.6560010469197e-05!GO:0016859;cis-trans isomerase activity;2.72948021556062e-05!GO:0006606;protein import into nucleus;2.79163123942005e-05!GO:0005768;endosome;2.88613757346734e-05!GO:0005525;GTP binding;3.41712618494776e-05!GO:0051170;nuclear import;3.44459222498531e-05!GO:0008654;phospholipid biosynthetic process;3.66210683630677e-05!GO:0006383;transcription from RNA polymerase III promoter;3.75989470820343e-05!GO:0016853;isomerase activity;3.78781866021174e-05!GO:0005762;mitochondrial large ribosomal subunit;3.93292824743814e-05!GO:0000315;organellar large ribosomal subunit;3.93292824743814e-05!GO:0003924;GTPase activity;4.34293779345834e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;4.5557864009518e-05!GO:0005788;endoplasmic reticulum lumen;4.63940447286845e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.45434461610011e-05!GO:0006414;translational elongation;6.15517130929092e-05!GO:0003729;mRNA binding;6.21336501618226e-05!GO:0016563;transcription activator activity;7.14133966102382e-05!GO:0005798;Golgi-associated vesicle;8.01704500799113e-05!GO:0031324;negative regulation of cellular metabolic process;9.49839480978787e-05!GO:0008186;RNA-dependent ATPase activity;9.58929348149024e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.97578505846451e-05!GO:0009056;catabolic process;0.000101911707213828!GO:0007052;mitotic spindle organization and biogenesis;0.000113833571083678!GO:0000786;nucleosome;0.000114314386157332!GO:0030880;RNA polymerase complex;0.00011452068768343!GO:0008017;microtubule binding;0.000135795948826818!GO:0005876;spindle microtubule;0.000150550450573015!GO:0000059;protein import into nucleus, docking;0.000163125924649709!GO:0000792;heterochromatin;0.0001694688258663!GO:0000139;Golgi membrane;0.000180949276773075!GO:0009892;negative regulation of metabolic process;0.000186133116039175!GO:0006310;DNA recombination;0.000190004448303323!GO:0046474;glycerophospholipid biosynthetic process;0.000200538175019286!GO:0003678;DNA helicase activity;0.000202369454149867!GO:0022890;inorganic cation transmembrane transporter activity;0.0002044831609401!GO:0043681;protein import into mitochondrion;0.000212988719270657!GO:0051052;regulation of DNA metabolic process;0.000224285006649329!GO:0043492;ATPase activity, coupled to movement of substances;0.000231775311983266!GO:0044452;nucleolar part;0.00023281228880597!GO:0012501;programmed cell death;0.000240447929250988!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000244682281531946!GO:0044440;endosomal part;0.000246958889740198!GO:0010008;endosome membrane;0.000246958889740198!GO:0005770;late endosome;0.000257386886802756!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000277483046049424!GO:0032561;guanyl ribonucleotide binding;0.000278870502056504!GO:0019001;guanyl nucleotide binding;0.000278870502056504!GO:0006915;apoptosis;0.000280254579761065!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000280586999425385!GO:0000428;DNA-directed RNA polymerase complex;0.000280586999425385!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000294395170119375!GO:0004004;ATP-dependent RNA helicase activity;0.000294431585692699!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000309734803630016!GO:0043021;ribonucleoprotein binding;0.000310124457277746!GO:0032508;DNA duplex unwinding;0.000321848874661273!GO:0032392;DNA geometric change;0.000321848874661273!GO:0009165;nucleotide biosynthetic process;0.000332798562470871!GO:0005875;microtubule associated complex;0.00034839179126944!GO:0016564;transcription repressor activity;0.000356193711012582!GO:0015980;energy derivation by oxidation of organic compounds;0.000357710602379464!GO:0006793;phosphorus metabolic process;0.000360193558650023!GO:0006796;phosphate metabolic process;0.000360193558650023!GO:0051087;chaperone binding;0.000392018830024259!GO:0006338;chromatin remodeling;0.000405403437150126!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000406001160795305!GO:0005741;mitochondrial outer membrane;0.000408771290105584!GO:0045454;cell redox homeostasis;0.0004209277868934!GO:0016251;general RNA polymerase II transcription factor activity;0.000430266272301374!GO:0006626;protein targeting to mitochondrion;0.000430354218564543!GO:0045786;negative regulation of progression through cell cycle;0.000432324681717962!GO:0046489;phosphoinositide biosynthetic process;0.000504050273233341!GO:0031968;organelle outer membrane;0.000521036984218013!GO:0045045;secretory pathway;0.000560761514289564!GO:0016481;negative regulation of transcription;0.000579107667754208!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000583745255913553!GO:0019867;outer membrane;0.000584887893688689!GO:0006839;mitochondrial transport;0.000596728263484598!GO:0008033;tRNA processing;0.000625439752589573!GO:0006612;protein targeting to membrane;0.000630145972441055!GO:0008250;oligosaccharyl transferase complex;0.000677188703321163!GO:0051920;peroxiredoxin activity;0.000690550647963956!GO:0030176;integral to endoplasmic reticulum membrane;0.000762758437016193!GO:0006352;transcription initiation;0.000785521392503243!GO:0016310;phosphorylation;0.000793769567543856!GO:0007006;mitochondrial membrane organization and biogenesis;0.000798681164475388!GO:0000910;cytokinesis;0.000818861519557176!GO:0006268;DNA unwinding during replication;0.000839051492204359!GO:0030521;androgen receptor signaling pathway;0.000955005732926214!GO:0031124;mRNA 3'-end processing;0.000969176865434143!GO:0048500;signal recognition particle;0.000980971457896779!GO:0006611;protein export from nucleus;0.000982681422447564!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000987081202963331!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000987081202963331!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000987081202963331!GO:0007093;mitotic cell cycle checkpoint;0.00104096491400916!GO:0046467;membrane lipid biosynthetic process;0.00107468085054695!GO:0003746;translation elongation factor activity;0.00110602133375338!GO:0003714;transcription corepressor activity;0.00112692431948171!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00115460439000664!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00115460439000664!GO:0008219;cell death;0.00115650062247245!GO:0016265;death;0.00115650062247245!GO:0004576;oligosaccharyl transferase activity;0.0011802329500135!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00122173426099462!GO:0006284;base-excision repair;0.00126416976904377!GO:0006378;mRNA polyadenylation;0.0014490231825132!GO:0031072;heat shock protein binding;0.00146331233810779!GO:0015992;proton transport;0.00146987327297465!GO:0000049;tRNA binding;0.00149473371971475!GO:0005048;signal sequence binding;0.00150600122729972!GO:0006818;hydrogen transport;0.00160303982623512!GO:0006405;RNA export from nucleus;0.0016326689457823!GO:0006289;nucleotide-excision repair;0.00175587068203755!GO:0048487;beta-tubulin binding;0.0018297395386208!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00193558748876775!GO:0005684;U2-dependent spliceosome;0.00193607948528542!GO:0008312;7S RNA binding;0.0019457273583783!GO:0030867;rough endoplasmic reticulum membrane;0.00199682393270996!GO:0032259;methylation;0.00200136796452269!GO:0005885;Arp2/3 protein complex;0.00202775716317679!GO:0008276;protein methyltransferase activity;0.00212873055633142!GO:0018196;peptidyl-asparagine modification;0.00222850511755809!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00222850511755809!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0022393321217096!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0022393321217096!GO:0031123;RNA 3'-end processing;0.00230121448250647!GO:0008022;protein C-terminus binding;0.00232314086706181!GO:0005905;coated pit;0.00249770287236712!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00249770287236712!GO:0042770;DNA damage response, signal transduction;0.00256323781327613!GO:0000922;spindle pole;0.00268014868201553!GO:0000228;nuclear chromosome;0.00268014868201553!GO:0004527;exonuclease activity;0.00273435856305356!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00275933568788655!GO:0045047;protein targeting to ER;0.00275933568788655!GO:0030496;midbody;0.00277825224386427!GO:0009116;nucleoside metabolic process;0.002859269180315!GO:0065007;biological regulation;0.00285940608628111!GO:0008180;signalosome;0.00287373574943968!GO:0035258;steroid hormone receptor binding;0.00287373574943968!GO:0003702;RNA polymerase II transcription factor activity;0.00290770062648945!GO:0042393;histone binding;0.00290960406461161!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00293946913341398!GO:0006650;glycerophospholipid metabolic process;0.00302932796671744!GO:0051246;regulation of protein metabolic process;0.00306741130478902!GO:0030384;phosphoinositide metabolic process;0.00316215980934244!GO:0007569;cell aging;0.00330821771264009!GO:0048523;negative regulation of cellular process;0.00338939673537279!GO:0000082;G1/S transition of mitotic cell cycle;0.00340395247249019!GO:0016126;sterol biosynthetic process;0.00342935113885609!GO:0000819;sister chromatid segregation;0.00345990643694046!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00368612241122451!GO:0051789;response to protein stimulus;0.00369750855588536!GO:0006986;response to unfolded protein;0.00369750855588536!GO:0007088;regulation of mitosis;0.00372429275644396!GO:0016787;hydrolase activity;0.00376046900689147!GO:0030137;COPI-coated vesicle;0.00400301349043391!GO:0043284;biopolymer biosynthetic process;0.00402604412626538!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00406171468217245!GO:0006891;intra-Golgi vesicle-mediated transport;0.00423481849885664!GO:0051287;NAD binding;0.00425002879447865!GO:0032200;telomere organization and biogenesis;0.00434051636801472!GO:0000723;telomere maintenance;0.00434051636801472!GO:0051539;4 iron, 4 sulfur cluster binding;0.00463748349758002!GO:0019899;enzyme binding;0.00466443122038325!GO:0005637;nuclear inner membrane;0.0047016944743764!GO:0016584;nucleosome positioning;0.00480134821543611!GO:0030118;clathrin coat;0.00485036098117336!GO:0000070;mitotic sister chromatid segregation;0.00496531612871846!GO:0030135;coated vesicle;0.00504421752884125!GO:0006275;regulation of DNA replication;0.00528189550473975!GO:0000339;RNA cap binding;0.00538962693566478!GO:0000152;nuclear ubiquitin ligase complex;0.00544176011031999!GO:0003711;transcription elongation regulator activity;0.00549841623774719!GO:0005869;dynactin complex;0.00551083723261468!GO:0031570;DNA integrity checkpoint;0.00552723139313917!GO:0000725;recombinational repair;0.00555044265854753!GO:0000724;double-strand break repair via homologous recombination;0.00555044265854753!GO:0008287;protein serine/threonine phosphatase complex;0.0058450346533855!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0058973043010629!GO:0009112;nucleobase metabolic process;0.00603603311451464!GO:0005881;cytoplasmic microtubule;0.00618539277293313!GO:0030134;ER to Golgi transport vesicle;0.00646800757915096!GO:0030518;steroid hormone receptor signaling pathway;0.00646800757915096!GO:0006695;cholesterol biosynthetic process;0.00665965144927219!GO:0006505;GPI anchor metabolic process;0.00673752205975059!GO:0007018;microtubule-based movement;0.00675337933133313!GO:0008629;induction of apoptosis by intracellular signals;0.00698044252109663!GO:0006144;purine base metabolic process;0.00705599939318952!GO:0030127;COPII vesicle coat;0.00772530607804477!GO:0012507;ER to Golgi transport vesicle membrane;0.00772530607804477!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00776287228245415!GO:0015002;heme-copper terminal oxidase activity;0.00776287228245415!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00776287228245415!GO:0004129;cytochrome-c oxidase activity;0.00776287228245415!GO:0033116;ER-Golgi intermediate compartment membrane;0.00796805959160121!GO:0030663;COPI coated vesicle membrane;0.00825766993554444!GO:0030126;COPI vesicle coat;0.00825766993554444!GO:0043414;biopolymer methylation;0.00835812529322097!GO:0016272;prefoldin complex;0.00859983938999311!GO:0006916;anti-apoptosis;0.00992334166076383!GO:0000781;chromosome, telomeric region;0.01037320624763!GO:0007021;tubulin folding;0.0104926794590943!GO:0005832;chaperonin-containing T-complex;0.0105391461813449!GO:0045892;negative regulation of transcription, DNA-dependent;0.010729324778703!GO:0000178;exosome (RNase complex);0.0108124687901282!GO:0043631;RNA polyadenylation;0.0110351016202337!GO:0031252;leading edge;0.0110606437683905!GO:0043067;regulation of programmed cell death;0.0113563797450252!GO:0000209;protein polyubiquitination;0.0114042054309444!GO:0006506;GPI anchor biosynthetic process;0.011532027618923!GO:0008139;nuclear localization sequence binding;0.0115660037825982!GO:0042981;regulation of apoptosis;0.0119446634243859!GO:0000790;nuclear chromatin;0.0125083620344615!GO:0006091;generation of precursor metabolites and energy;0.012633305294281!GO:0046112;nucleobase biosynthetic process;0.0128784852177133!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0128892288685323!GO:0006730;one-carbon compound metabolic process;0.0130646870352594!GO:0006220;pyrimidine nucleotide metabolic process;0.0130830752061796!GO:0004518;nuclease activity;0.0131118479889769!GO:0006595;polyamine metabolic process;0.0133247296464932!GO:0004674;protein serine/threonine kinase activity;0.0134992857826291!GO:0005758;mitochondrial intermembrane space;0.0136717038502786!GO:0043069;negative regulation of programmed cell death;0.014033892504833!GO:0031301;integral to organelle membrane;0.014033892504833!GO:0000077;DNA damage checkpoint;0.0141259359027199!GO:0006497;protein amino acid lipidation;0.0141738393630984!GO:0008408;3'-5' exonuclease activity;0.0142024136417712!GO:0005663;DNA replication factor C complex;0.0149154382774928!GO:0008652;amino acid biosynthetic process;0.0153536364250119!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.015514806926951!GO:0043407;negative regulation of MAP kinase activity;0.0155256736023468!GO:0004003;ATP-dependent DNA helicase activity;0.0155789134144481!GO:0007004;telomere maintenance via telomerase;0.0159020473762001!GO:0043066;negative regulation of apoptosis;0.015932063360865!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0159475029295141!GO:0016585;chromatin remodeling complex;0.016532701654172!GO:0031902;late endosome membrane;0.0165799685410418!GO:0005720;nuclear heterochromatin;0.0167742470132603!GO:0050681;androgen receptor binding;0.0170644679181529!GO:0006270;DNA replication initiation;0.0171115959512072!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0173360419856995!GO:0004722;protein serine/threonine phosphatase activity;0.0174792435261751!GO:0006402;mRNA catabolic process;0.0175167937381008!GO:0009451;RNA modification;0.0175921364351028!GO:0045893;positive regulation of transcription, DNA-dependent;0.0180395849335347!GO:0016279;protein-lysine N-methyltransferase activity;0.0182439516677324!GO:0018024;histone-lysine N-methyltransferase activity;0.0182439516677324!GO:0016278;lysine N-methyltransferase activity;0.0182439516677324!GO:0051540;metal cluster binding;0.0182439516677324!GO:0051536;iron-sulfur cluster binding;0.0182439516677324!GO:0030658;transport vesicle membrane;0.0188560113132412!GO:0042054;histone methyltransferase activity;0.0189595932967618!GO:0044450;microtubule organizing center part;0.0190783248451456!GO:0007264;small GTPase mediated signal transduction;0.0193626125322153!GO:0006376;mRNA splice site selection;0.0193634796210264!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0193634796210264!GO:0040029;regulation of gene expression, epigenetic;0.0194179017144507!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0195287509158326!GO:0019783;small conjugating protein-specific protease activity;0.0197957008371775!GO:0004532;exoribonuclease activity;0.0198671526927992!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0198671526927992!GO:0005669;transcription factor TFIID complex;0.0200519889446816!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0201356989257566!GO:0055083;monovalent inorganic anion homeostasis;0.0201356989257566!GO:0055064;chloride ion homeostasis;0.0201356989257566!GO:0030644;cellular chloride ion homeostasis;0.0201356989257566!GO:0004843;ubiquitin-specific protease activity;0.0202739625849116!GO:0031970;organelle envelope lumen;0.0202921009937889!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0203434680558247!GO:0007019;microtubule depolymerization;0.0208471641287146!GO:0009303;rRNA transcription;0.0218722450495818!GO:0043022;ribosome binding;0.021996885182768!GO:0000118;histone deacetylase complex;0.022091697292124!GO:0000096;sulfur amino acid metabolic process;0.0222321844471913!GO:0016044;membrane organization and biogenesis;0.0226436878262441!GO:0031577;spindle checkpoint;0.0227358850804477!GO:0043624;cellular protein complex disassembly;0.0227503083528223!GO:0008270;zinc ion binding;0.022928880481149!GO:0006301;postreplication repair;0.0234491213873188!GO:0033673;negative regulation of kinase activity;0.0236772747756579!GO:0006469;negative regulation of protein kinase activity;0.0236772747756579!GO:0006400;tRNA modification;0.023838531600591!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0239183579486434!GO:0046128;purine ribonucleoside metabolic process;0.0243784421125688!GO:0042278;purine nucleoside metabolic process;0.0243784421125688!GO:0008610;lipid biosynthetic process;0.0243871334135373!GO:0043130;ubiquitin binding;0.0248806005231225!GO:0032182;small conjugating protein binding;0.0248806005231225!GO:0046483;heterocycle metabolic process;0.02502534604862!GO:0048519;negative regulation of biological process;0.0254258200398062!GO:0019206;nucleoside kinase activity;0.025481712667466!GO:0005791;rough endoplasmic reticulum;0.0259038768659329!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0259569215127823!GO:0050773;regulation of dendrite development;0.0266033145949363!GO:0045941;positive regulation of transcription;0.0266181673119132!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0274331874749964!GO:0008536;Ran GTPase binding;0.027644957681884!GO:0030133;transport vesicle;0.0276734707584801!GO:0005769;early endosome;0.0278330435031741!GO:0004221;ubiquitin thiolesterase activity;0.0285275572995022!GO:0004523;ribonuclease H activity;0.029004376020681!GO:0016790;thiolester hydrolase activity;0.029118437374378!GO:0051348;negative regulation of transferase activity;0.0292969937169524!GO:0043596;nuclear replication fork;0.0293634702654014!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0293634702654014!GO:0044454;nuclear chromosome part;0.0294047848544919!GO:0006278;RNA-dependent DNA replication;0.0295218072238886!GO:0005680;anaphase-promoting complex;0.0303943273268448!GO:0017134;fibroblast growth factor binding;0.0304435781859501!GO:0046982;protein heterodimerization activity;0.0305248480054599!GO:0000287;magnesium ion binding;0.030540355153!GO:0042026;protein refolding;0.0309323657739947!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0309559034790502!GO:0042158;lipoprotein biosynthetic process;0.031122527861531!GO:0006096;glycolysis;0.031447644684107!GO:0005784;translocon complex;0.0317850410636293!GO:0032940;secretion by cell;0.0318842875171112!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.03197831338963!GO:0001725;stress fiber;0.03197831338963!GO:0032432;actin filament bundle;0.03197831338963!GO:0030522;intracellular receptor-mediated signaling pathway;0.033043833672553!GO:0004680;casein kinase activity;0.0331988498574272!GO:0031371;ubiquitin conjugating enzyme complex;0.0333424360413868!GO:0030660;Golgi-associated vesicle membrane;0.03384855178695!GO:0000726;non-recombinational repair;0.03384855178695!GO:0006401;RNA catabolic process;0.0344247772564516!GO:0019843;rRNA binding;0.0346089758512037!GO:0030508;thiol-disulfide exchange intermediate activity;0.0348540086645397!GO:0000805;X chromosome;0.0353468888696167!GO:0001740;Barr body;0.0353468888696167!GO:0046966;thyroid hormone receptor binding;0.0358718531363171!GO:0032984;macromolecular complex disassembly;0.0361816078766001!GO:0045502;dynein binding;0.0362196973296831!GO:0008538;proteasome activator activity;0.0362196973296831!GO:0003730;mRNA 3'-UTR binding;0.0366460460984751!GO:0043189;H4/H2A histone acetyltransferase complex;0.0379923022890137!GO:0006541;glutamine metabolic process;0.0388360804760766!GO:0006007;glucose catabolic process;0.0388385303655493!GO:0030911;TPR domain binding;0.0388385303655493!GO:0035267;NuA4 histone acetyltransferase complex;0.0388604642341945!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0389111302985354!GO:0006661;phosphatidylinositol biosynthetic process;0.0389612722500168!GO:0051318;G1 phase;0.0398031763912784!GO:0042791;5S class rRNA transcription;0.04003008710023!GO:0000127;transcription factor TFIIIC complex;0.04003008710023!GO:0042797;tRNA transcription from RNA polymerase III promoter;0.04003008710023!GO:0051128;regulation of cellular component organization and biogenesis;0.04003008710023!GO:0042585;germinal vesicle;0.04003008710023!GO:0005871;kinesin complex;0.04003008710023!GO:0003725;double-stranded RNA binding;0.0400679206148501!GO:0030119;AP-type membrane coat adaptor complex;0.0404269653957414!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0411434786634909!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0413931891540623!GO:0008601;protein phosphatase type 2A regulator activity;0.0417296136530959!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0427606908637972!GO:0000123;histone acetyltransferase complex;0.042849213762261!GO:0032981;mitochondrial respiratory chain complex I assembly;0.042849213762261!GO:0010257;NADH dehydrogenase complex assembly;0.042849213762261!GO:0033108;mitochondrial respiratory chain complex assembly;0.042849213762261!GO:0051053;negative regulation of DNA metabolic process;0.0435612128373036!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0437586091210214!GO:0006266;DNA ligation;0.0444518904227822!GO:0033170;DNA-protein loading ATPase activity;0.0444518904227822!GO:0003689;DNA clamp loader activity;0.0444518904227822!GO:0008097;5S rRNA binding;0.0447774751829175!GO:0006672;ceramide metabolic process;0.0447774751829175!GO:0005851;eukaryotic translation initiation factor 2B complex;0.0459949000184906!GO:0016579;protein deubiquitination;0.046759552963798!GO:0008092;cytoskeletal protein binding;0.0473448673856089!GO:0005083;small GTPase regulator activity;0.0484341233208375!GO:0009066;aspartate family amino acid metabolic process;0.0484918933991411!GO:0050000;chromosome localization;0.0484918933991411!GO:0051303;establishment of chromosome localization;0.0484918933991411!GO:0016491;oxidoreductase activity;0.0490886813888904!GO:0009113;purine base biosynthetic process;0.0494177813943288!GO:0030131;clathrin adaptor complex;0.0494177813943288 | |||
|sample_id=10539 | |sample_id=10539 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=adrenal gland | |sample_tissue=adrenal gland | ||
|top_motifs=NANOG:3.80652404284;FOXM1:2.39321908116;TFDP1:2.36259522134;AHR_ARNT_ARNT2:1.98830525964;GFI1:1.90952179435;NFY{A,B,C}:1.85661534419;SOX2:1.80863601583;NRF1:1.8039124736;FOX{I1,J2}:1.76430559927;YY1:1.68868958113;CDC5L:1.66719959593;PAX5:1.57436126997;PAX6:1.55536063205;SOX{8,9,10}:1.5538597947;E2F1..5:1.53449551427;NKX2-1,4:1.486280169;NKX2-3_NKX2-5:1.43823987753;PAX3,7:1.38752047848;PDX1:1.37141736471;ZNF143:1.37007755486;PATZ1:1.35515880698;NKX6-1,2:1.33346781658;BREu{core}:1.30454554511;MED-1{core}:1.30101092911;STAT1,3:1.26228273281;SOX17:1.26104841755;ZFP161:1.245016465;POU6F1:1.23597522945;LEF1_TCF7_TCF7L1,2:1.20317263912;ATF4:1.15013334662;ADNP_IRX_SIX_ZHX:1.12623724304;ONECUT1,2:1.07644199774;ARID5B:1.02000117503;PRRX1,2:1.00002116917;RORA:0.981279333285;ELK1,4_GABP{A,B1}:0.962508860797;ZIC1..3:0.957812528784;RBPJ:0.935580508727;POU1F1:0.919413146566;OCT4_SOX2{dimer}:0.881242887327;RREB1:0.876555299563;ZNF423:0.867019497594;JUN:0.860254049582;FOXP1:0.84459187766;EVI1:0.830932709077;HOXA9_MEIS1:0.822654692198;PITX1..3:0.803823093472;VSX1,2:0.803791124815;DBP:0.800035475016;HOX{A6,A7,B6,B7}:0.794443875556;EN1,2:0.78415529217;RFX2..5_RFXANK_RFXAP:0.77321301854;LHX3,4:0.769660165299;ATF2:0.752898418365;GFI1B:0.734540137569;REST:0.730336493025;NHLH1,2:0.715338914882;CDX1,2,4:0.697391714666;POU5F1:0.696773819849;ESRRA:0.694413396446;PAX8:0.623443444393;CRX:0.592155920817;FOXD3:0.575080650122;ZNF384:0.565380845579;TAL1_TCF{3,4,12}:0.560118287865;IKZF1:0.558814302843;EGR1..3:0.534344286037;TFAP2B:0.499025618824;MYFfamily:0.485740051145;GTF2I:0.474102635594;RFX1:0.460629551862;TGIF1:0.440970305377;NR1H4:0.423078271912;HIC1:0.419525275236;FOXQ1:0.418432493006;PAX4:0.417119341123;PAX1,9:0.408469660106;MYB:0.407063051883;PBX1:0.40531686275;CUX2:0.39286560302;HOX{A4,D4}:0.392057890489;BPTF:0.382345377098;HAND1,2:0.372594299444;CREB1:0.362219940971;MZF1:0.342846832248;T:0.330414694394;TOPORS:0.304261075877;PRDM1:0.299209308095;AIRE:0.29567480315;ATF5_CREB3:0.294045818571;SOX5:0.28120224318;KLF4:0.25775793419;MAZ:0.252394929464;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.245844654948;ZBTB6:0.243712298534;SMAD1..7,9:0.235180777105;MYBL2:0.222361928033;GATA4:0.188903856869;HBP1_HMGB_SSRP1_UBTF:0.183950959702;POU3F1..4:0.182110865347;NR3C1:0.146913087695;GATA6:0.108855811399;MEF2{A,B,C,D}:0.0881488647851;HNF1A:0.0219096026648;POU2F1..3:-0.00975179462661;bHLH_family:-0.0247822615416;AR:-0.0485327169087;SREBF1,2:-0.0693826442481;MTE{core}:-0.0778183077353;GTF2A1,2:-0.0815223715507;FOXA2:-0.105000321224;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.113091457905;HSF1,2:-0.11582849286;FOSL2:-0.16788600755;STAT5{A,B}:-0.168474306896;NFIL3:-0.178771222218;ZBTB16:-0.182843634512;DMAP1_NCOR{1,2}_SMARC:-0.189036703112;PPARG:-0.205532875426;GCM1,2:-0.209426847176;TBX4,5:-0.221570579863;HOX{A5,B5}:-0.228689109871;FOXL1:-0.233271462136;ELF1,2,4:-0.241692788232;XCPE1{core}:-0.256790799395;TFCP2:-0.280787234937;EP300:-0.289873539874;IKZF2:-0.299794217555;FOXN1:-0.310491122791;HLF:-0.335242089175;MTF1:-0.340021743174;NFE2L1:-0.353450197222;NFE2L2:-0.357308619978;PAX2:-0.359131350325;HES1:-0.369559514503;UFEwm:-0.376567925379;NANOG{mouse}:-0.37716758753;TLX1..3_NFIC{dimer}:-0.412435925644;RXR{A,B,G}:-0.435445671056;NFATC1..3:-0.442115922459;SPI1:-0.459689081315;TP53:-0.464014240598;NR5A1,2:-0.473721270551;BACH2:-0.491181750527;NFIX:-0.505317628855;HNF4A_NR2F1,2:-0.507074118407;NFKB1_REL_RELA:-0.528997337093;ESR1:-0.535309617571;FOX{F1,F2,J1}:-0.54587292921;SNAI1..3:-0.550949934341;NKX2-2,8:-0.554468028109;RUNX1..3:-0.579971853087;FOXP3:-0.57998803777;FOX{D1,D2}:-0.585677349144;TFAP4:-0.602346194206;TEF:-0.610823084472;TFAP2{A,C}:-0.612319115386;NFE2:-0.633665157852;MAFB:-0.636417746016;SPIB:-0.637123349102;FOS_FOS{B,L1}_JUN{B,D}:-0.638135618348;LMO2:-0.65736334656;CEBPA,B_DDIT3:-0.674788321355;HIF1A:-0.692805544528;NKX3-1:-0.699961272742;EBF1:-0.708532590432;XBP1:-0.735489630939;GZF1:-0.75622643812;IRF7:-0.813288399441;ETS1,2:-0.831899706414;ZNF238:-0.837651428327;ZEB1:-0.843890625784;IRF1,2:-0.84926944577;ZNF148:-0.911609042904;TBP:-0.952697886324;SP1:-0.995452301235;ATF6:-1.02311816104;NR6A1:-1.02548486878;ALX4:-1.03734842786;FOXO1,3,4:-1.037433431;TLX2:-1.04127193472;ALX1:-1.08073818069;GLI1..3:-1.13634823366;NKX3-2:-1.15915068975;TEAD1:-1.21053547985;SRF:-1.2646285614;MYOD1:-1.28358979459;HMGA1,2:-1.3054965041;STAT2,4,6:-1.43230161237;HMX1:-1.54682728154;RXRA_VDR{dimer}:-1.64220318277;SPZ1:-1.951317722 | |top_motifs=NANOG:3.80652404284;FOXM1:2.39321908116;TFDP1:2.36259522134;AHR_ARNT_ARNT2:1.98830525964;GFI1:1.90952179435;NFY{A,B,C}:1.85661534419;SOX2:1.80863601583;NRF1:1.8039124736;FOX{I1,J2}:1.76430559927;YY1:1.68868958113;CDC5L:1.66719959593;PAX5:1.57436126997;PAX6:1.55536063205;SOX{8,9,10}:1.5538597947;E2F1..5:1.53449551427;NKX2-1,4:1.486280169;NKX2-3_NKX2-5:1.43823987753;PAX3,7:1.38752047848;PDX1:1.37141736471;ZNF143:1.37007755486;PATZ1:1.35515880698;NKX6-1,2:1.33346781658;BREu{core}:1.30454554511;MED-1{core}:1.30101092911;STAT1,3:1.26228273281;SOX17:1.26104841755;ZFP161:1.245016465;POU6F1:1.23597522945;LEF1_TCF7_TCF7L1,2:1.20317263912;ATF4:1.15013334662;ADNP_IRX_SIX_ZHX:1.12623724304;ONECUT1,2:1.07644199774;ARID5B:1.02000117503;PRRX1,2:1.00002116917;RORA:0.981279333285;ELK1,4_GABP{A,B1}:0.962508860797;ZIC1..3:0.957812528784;RBPJ:0.935580508727;POU1F1:0.919413146566;OCT4_SOX2{dimer}:0.881242887327;RREB1:0.876555299563;ZNF423:0.867019497594;JUN:0.860254049582;FOXP1:0.84459187766;EVI1:0.830932709077;HOXA9_MEIS1:0.822654692198;PITX1..3:0.803823093472;VSX1,2:0.803791124815;DBP:0.800035475016;HOX{A6,A7,B6,B7}:0.794443875556;EN1,2:0.78415529217;RFX2..5_RFXANK_RFXAP:0.77321301854;LHX3,4:0.769660165299;ATF2:0.752898418365;GFI1B:0.734540137569;REST:0.730336493025;NHLH1,2:0.715338914882;CDX1,2,4:0.697391714666;POU5F1:0.696773819849;ESRRA:0.694413396446;PAX8:0.623443444393;CRX:0.592155920817;FOXD3:0.575080650122;ZNF384:0.565380845579;TAL1_TCF{3,4,12}:0.560118287865;IKZF1:0.558814302843;EGR1..3:0.534344286037;TFAP2B:0.499025618824;MYFfamily:0.485740051145;GTF2I:0.474102635594;RFX1:0.460629551862;TGIF1:0.440970305377;NR1H4:0.423078271912;HIC1:0.419525275236;FOXQ1:0.418432493006;PAX4:0.417119341123;PAX1,9:0.408469660106;MYB:0.407063051883;PBX1:0.40531686275;CUX2:0.39286560302;HOX{A4,D4}:0.392057890489;BPTF:0.382345377098;HAND1,2:0.372594299444;CREB1:0.362219940971;MZF1:0.342846832248;T:0.330414694394;TOPORS:0.304261075877;PRDM1:0.299209308095;AIRE:0.29567480315;ATF5_CREB3:0.294045818571;SOX5:0.28120224318;KLF4:0.25775793419;MAZ:0.252394929464;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.245844654948;ZBTB6:0.243712298534;SMAD1..7,9:0.235180777105;MYBL2:0.222361928033;GATA4:0.188903856869;HBP1_HMGB_SSRP1_UBTF:0.183950959702;POU3F1..4:0.182110865347;NR3C1:0.146913087695;GATA6:0.108855811399;MEF2{A,B,C,D}:0.0881488647851;HNF1A:0.0219096026648;POU2F1..3:-0.00975179462661;bHLH_family:-0.0247822615416;AR:-0.0485327169087;SREBF1,2:-0.0693826442481;MTE{core}:-0.0778183077353;GTF2A1,2:-0.0815223715507;FOXA2:-0.105000321224;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.113091457905;HSF1,2:-0.11582849286;FOSL2:-0.16788600755;STAT5{A,B}:-0.168474306896;NFIL3:-0.178771222218;ZBTB16:-0.182843634512;DMAP1_NCOR{1,2}_SMARC:-0.189036703112;PPARG:-0.205532875426;GCM1,2:-0.209426847176;TBX4,5:-0.221570579863;HOX{A5,B5}:-0.228689109871;FOXL1:-0.233271462136;ELF1,2,4:-0.241692788232;XCPE1{core}:-0.256790799395;TFCP2:-0.280787234937;EP300:-0.289873539874;IKZF2:-0.299794217555;FOXN1:-0.310491122791;HLF:-0.335242089175;MTF1:-0.340021743174;NFE2L1:-0.353450197222;NFE2L2:-0.357308619978;PAX2:-0.359131350325;HES1:-0.369559514503;UFEwm:-0.376567925379;NANOG{mouse}:-0.37716758753;TLX1..3_NFIC{dimer}:-0.412435925644;RXR{A,B,G}:-0.435445671056;NFATC1..3:-0.442115922459;SPI1:-0.459689081315;TP53:-0.464014240598;NR5A1,2:-0.473721270551;BACH2:-0.491181750527;NFIX:-0.505317628855;HNF4A_NR2F1,2:-0.507074118407;NFKB1_REL_RELA:-0.528997337093;ESR1:-0.535309617571;FOX{F1,F2,J1}:-0.54587292921;SNAI1..3:-0.550949934341;NKX2-2,8:-0.554468028109;RUNX1..3:-0.579971853087;FOXP3:-0.57998803777;FOX{D1,D2}:-0.585677349144;TFAP4:-0.602346194206;TEF:-0.610823084472;TFAP2{A,C}:-0.612319115386;NFE2:-0.633665157852;MAFB:-0.636417746016;SPIB:-0.637123349102;FOS_FOS{B,L1}_JUN{B,D}:-0.638135618348;LMO2:-0.65736334656;CEBPA,B_DDIT3:-0.674788321355;HIF1A:-0.692805544528;NKX3-1:-0.699961272742;EBF1:-0.708532590432;XBP1:-0.735489630939;GZF1:-0.75622643812;IRF7:-0.813288399441;ETS1,2:-0.831899706414;ZNF238:-0.837651428327;ZEB1:-0.843890625784;IRF1,2:-0.84926944577;ZNF148:-0.911609042904;TBP:-0.952697886324;SP1:-0.995452301235;ATF6:-1.02311816104;NR6A1:-1.02548486878;ALX4:-1.03734842786;FOXO1,3,4:-1.037433431;TLX2:-1.04127193472;ALX1:-1.08073818069;GLI1..3:-1.13634823366;NKX3-2:-1.15915068975;TEAD1:-1.21053547985;SRF:-1.2646285614;MYOD1:-1.28358979459;HMGA1,2:-1.3054965041;STAT2,4,6:-1.43230161237;HMX1:-1.54682728154;RXRA_VDR{dimer}:-1.64220318277;SPZ1:-1.951317722 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10539-107G8;search_select_hide=table117:FF:10539-107G8 | |||
}} | }} | ||
Latest revision as of 14:28, 3 June 2020
| Name: | neuroblastoma cell line:NB-1 |
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| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11284 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11284
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11284
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.216 |
| 10 | 10 | 0.24 |
| 100 | 100 | 0.77 |
| 101 | 101 | 0.864 |
| 102 | 102 | 0.571 |
| 103 | 103 | 0.0221 |
| 104 | 104 | 0.317 |
| 105 | 105 | 0.594 |
| 106 | 106 | 8.45173e-4 |
| 107 | 107 | 0.0234 |
| 108 | 108 | 0.724 |
| 109 | 109 | 0.0491 |
| 11 | 11 | 0.112 |
| 110 | 110 | 0.258 |
| 111 | 111 | 0.226 |
| 112 | 112 | 0.0783 |
| 113 | 113 | 0.24 |
| 114 | 114 | 0.0218 |
| 115 | 115 | 0.52 |
| 116 | 116 | 0.298 |
| 117 | 117 | 0.1 |
| 118 | 118 | 0.362 |
| 119 | 119 | 0.383 |
| 12 | 12 | 0.806 |
| 120 | 120 | 0.206 |
| 121 | 121 | 0.983 |
| 122 | 122 | 0.638 |
| 123 | 123 | 0.663 |
| 124 | 124 | 0.146 |
| 125 | 125 | 0.967 |
| 126 | 126 | 0.142 |
| 127 | 127 | 0.127 |
| 128 | 128 | 0.0162 |
| 129 | 129 | 0.0554 |
| 13 | 13 | 0.0228 |
| 130 | 130 | 0.0135 |
| 131 | 131 | 0.55 |
| 132 | 132 | 0.929 |
| 133 | 133 | 0.86 |
| 134 | 134 | 0.993 |
| 135 | 135 | 0.965 |
| 136 | 136 | 0.643 |
| 137 | 137 | 0.285 |
| 138 | 138 | 0.432 |
| 139 | 139 | 0.0952 |
| 14 | 14 | 0.651 |
| 140 | 140 | 0.0307 |
| 141 | 141 | 0.399 |
| 142 | 142 | 0.717 |
| 143 | 143 | 0.0986 |
| 144 | 144 | 0.65 |
| 145 | 145 | 0.231 |
| 146 | 146 | 0.959 |
| 147 | 147 | 0.609 |
| 148 | 148 | 0.0328 |
| 149 | 149 | 0.104 |
| 15 | 15 | 0.122 |
| 150 | 150 | 0.284 |
| 151 | 151 | 0.403 |
| 152 | 152 | 0.0171 |
| 153 | 153 | 0.705 |
| 154 | 154 | 0.791 |
| 155 | 155 | 0.574 |
| 156 | 156 | 0.628 |
| 157 | 157 | 0.643 |
| 158 | 158 | 0.927 |
| 159 | 159 | 0.179 |
| 16 | 16 | 0.0936 |
| 160 | 160 | 0.0739 |
| 161 | 161 | 0.271 |
| 162 | 162 | 0.619 |
| 163 | 163 | 0.896 |
| 164 | 164 | 0.0144 |
| 165 | 165 | 0.0774 |
| 166 | 166 | 0.964 |
| 167 | 167 | 0.311 |
| 168 | 168 | 0.0306 |
| 169 | 169 | 0.0149 |
| 17 | 17 | 0.218 |
| 18 | 18 | 0.291 |
| 19 | 19 | 0.0814 |
| 2 | 2 | 0.354 |
| 20 | 20 | 0.535 |
| 21 | 21 | 0.392 |
| 22 | 22 | 0.15 |
| 23 | 23 | 0.0207 |
| 24 | 24 | 0.249 |
| 25 | 25 | 0.789 |
| 26 | 26 | 0.0225 |
| 27 | 27 | 0.324 |
| 28 | 28 | 0.617 |
| 29 | 29 | 0.234 |
| 3 | 3 | 0.0493 |
| 30 | 30 | 0.618 |
| 31 | 31 | 0.6 |
| 32 | 32 | 0.00102 |
| 33 | 33 | 0.367 |
| 34 | 34 | 0.593 |
| 35 | 35 | 0.614 |
| 36 | 36 | 0.959 |
| 37 | 37 | 0.159 |
| 38 | 38 | 0.189 |
| 39 | 39 | 0.253 |
| 4 | 4 | 0.525 |
| 40 | 40 | 0.385 |
| 41 | 41 | 0.208 |
| 42 | 42 | 0.271 |
| 43 | 43 | 0.0948 |
| 44 | 44 | 0.249 |
| 45 | 45 | 0.365 |
| 46 | 46 | 0.141 |
| 47 | 47 | 0.326 |
| 48 | 48 | 0.177 |
| 49 | 49 | 0.18 |
| 5 | 5 | 0.306 |
| 50 | 50 | 0.455 |
| 51 | 51 | 0.56 |
| 52 | 52 | 0.11 |
| 53 | 53 | 0.852 |
| 54 | 54 | 0.467 |
| 55 | 55 | 0.0188 |
| 56 | 56 | 0.276 |
| 57 | 57 | 0.853 |
| 58 | 58 | 0.275 |
| 59 | 59 | 0.0333 |
| 6 | 6 | 0.714 |
| 60 | 60 | 0.0151 |
| 61 | 61 | 0.415 |
| 62 | 62 | 0.163 |
| 63 | 63 | 0.109 |
| 64 | 64 | 0.691 |
| 65 | 65 | 0.0928 |
| 66 | 66 | 0.64 |
| 67 | 67 | 0.292 |
| 68 | 68 | 0.316 |
| 69 | 69 | 0.144 |
| 7 | 7 | 0.197 |
| 70 | 70 | 0.00687 |
| 71 | 71 | 0.0494 |
| 72 | 72 | 0.278 |
| 73 | 73 | 0.0229 |
| 74 | 74 | 0.303 |
| 75 | 75 | 0.211 |
| 76 | 76 | 0.466 |
| 77 | 77 | 0.0806 |
| 78 | 78 | 0.123 |
| 79 | 79 | 0.372 |
| 8 | 8 | 0.0771 |
| 80 | 80 | 0.145 |
| 81 | 81 | 0.49 |
| 82 | 82 | 0.151 |
| 83 | 83 | 0.0192 |
| 84 | 84 | 0.429 |
| 85 | 85 | 0.0573 |
| 86 | 86 | 0.67 |
| 87 | 87 | 0.227 |
| 88 | 88 | 0.431 |
| 89 | 89 | 0.151 |
| 9 | 9 | 0.279 |
| 90 | 90 | 0.432 |
| 91 | 91 | 0.0215 |
| 92 | 92 | 0.063 |
| 93 | 93 | 0.29 |
| 94 | 94 | 0.107 |
| 95 | 95 | 0.0282 |
| 96 | 96 | 0.507 |
| 97 | 97 | 0.894 |
| 98 | 98 | 0.509 |
| 99 | 99 | 0.426 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11284
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100932 neuroblastoma cell line sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000333 (migratory neural crest cell)
0000003 (native cell)
0000548 (animal cell)
0002321 (embryonic cell)
0000219 (motile cell)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
171 (neuroectodermal tumor)
3095 (germ cell and embryonal cancer)
2994 (germ cell cancer)
169 (neuroendocrine tumor)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000013 (sympathetic nervous system)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0002410 (autonomic nervous system)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0000010 (peripheral nervous system)
0001016 (nervous system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100932 (neuroblastoma cell line sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)
