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{{f5samples
{{f5samples
|id=FF:11605-120I3
|DRA_sample_Accession=CAGE@SAMD00004909
|name=Cardiac Myocyte, donor2
|accession_numbers=CAGE;DRX008199;DRR009071;DRZ000496;DRZ001881;DRZ011846;DRZ013231
|sample_id=11605
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009
|rna_tube_id=120I3
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0000393,CL:0000183,CL:0000187,CL:0000211,CL:0000255,CL:0002494,CL:0000737,CL:0000746
|rna_box=120
|rna_position=I3
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Sciencell/3H
|rna_lot_number=
|rna_catalog_number=SC6205
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=heart
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=cardiac muscle cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_weight_ug=10
|rna_concentration=0.626
|sample_note=
|profile_hcage=CNhs12350,LSID913,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000056,CL:0000144,CL:0000183,CL:0000187,CL:0000211,CL:0000220,CL:0000222,CL:0000255,CL:0000355,CL:0000393,CL:0000513,CL:0000548,CL:0000680,CL:0000723,CL:0000737,CL:0000746,CL:0002321,CL:0002371,CL:0002494
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000061,UBERON:0000062,UBERON:0000119,UBERON:0000383,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000486,UBERON:0000490,UBERON:0000914,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000948,UBERON:0001009,UBERON:0001015,UBERON:0001048,UBERON:0001062,UBERON:0001134,UBERON:0002036,UBERON:0002050,UBERON:0002204,UBERON:0002329,UBERON:0002385,UBERON:0002532,UBERON:0003059,UBERON:0003077,UBERON:0003081,UBERON:0003082,UBERON:0003084,UBERON:0003104,UBERON:0003914,UBERON:0004120,UBERON:0004140,UBERON:0004141,UBERON:0004290,UBERON:0004291,UBERON:0004535,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0005498,UBERON:0007005,UBERON:0007100,UBERON:0009142
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000118
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!2.31!203.22!TCF21;;chr8:11561684..11561751,+!p1@GATA4!1.85!69.08!GATA4;;chr7:35293685..35293718,-!p1@TBX20!1.71!50.30!TBX20;;chr6:85474299..85474324,-!p1@TBX18!1.68!81.15!TBX18;;chr17:1959369..1959388,+!p2@HIC1!1.66!114.02!HIC1;;chr4:174451370..174451387,-!p1@HAND2!1.66!44.94!HAND2;;chr11:61520075..61520136,+!p1@C11orf9!1.44!55.67!C11orf9;;chr18:19749386..19749404,+!p2@GATA6!1.42!36.22!GATA6;;chr11:32457075..32457095,-!p1@WT1!1.28!18.11!WT1;;chr8:55370487..55370503,+!p1@SOX17!1.27!17.44!SOX17;;chr18:19749541..19749557,+!p1@GATA6!1.26!53.66!GATA6;;chr7:19157248..19157268,-!p1@TWIST1!1.25!45.61!TWIST1;;chr15:67430351..67430366,+!p10@SMAD3!1.22!15.43!SMAD3;;chr2:19558373..19558392,-!p1@OSR1!1.21!41.58!OSR1;;chr17:70117153..70117174,+!p1@SOX9!1.16!138.16!SOX9;;chr15:57511609..57511651,+!p2@TCF12!1.16!22.80!TCF12;;chr11:47279504..47279563,+!p1@NR1H3!1.15!29.51!NR1H3;;chr17:1958388..1958404,+!p1@HIC1!1.12!77.80!HIC1;;chr6:19837592..19837621,+!p1@ID4!1.07!66.40!ID4;;chr20:30193083..30193098,+!p1@ID1!1.06!847.10!ID1;;chr3:141087393..141087426,+!p3@ZBTB38!1.05!41.58!ZBTB38;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.04!10.06!PEG3;;chr6:126240380..126240430,+!p2@NCOA7!1.01!24.15!NCOA7;;chr3:25469724..25469773,+!p1@RARB!0.99!12.74!RARB;;chr8:10588010..10588030,-!p1@SOX7!0.99!8.72!SOX7;;chr16:85932760..85932775,+!p1@IRF8!0.99!8.72!IRF8;;chr10:64576105..64576133,-!p1@EGR2!0.98!18.11!EGR2;;chr5:92918919..92918942,+!p1@NR2F1!0.95!36.89!NR2F1;;chr9:73029219..73029289,-!p2@KLF9!0.94!24.15!KLF9;;chr6:85473156..85473210,-!p2@TBX18!0.94!9.39!TBX18;;chr1:164528410..164528428,+!p1@PBX1!0.93!58.35!PBX1;;chr20:48599506..48599526,+!p1@SNAI1!0.93!49.63!SNAI1;;chr14:62162285..62162296,+!p3@HIF1A!0.93!40.91!HIF1A;;chr20:62680984..62680999,-!p1@SOX18!0.93!10.06!SOX18;;chr21:39870339..39870443,-!p1@ERG!0.92!7.38!ERG;;chr8:48650715..48650735,-!p1@CEBPD!0.91!943.01!CEBPD;;chr14:62162258..62162269,+!p2@HIF1A!0.91!71.09!HIF1A;;chr1:158969752..158969780,+!p6@IFI16!0.91!12.74!IFI16;;chr18:19749517..19749531,+!p3@GATA6!0.90!12.74!GATA6;;chr18:19749353..19749367,+!p4@GATA6!0.89!6.71!GATA6;;chr1:158975744..158975769,+!p10@IFI16!0.89!6.71!IFI16;;chr1:164528942..164528964,+!p11@PBX1!0.89!6.71!PBX1;;chr1:40105299..40105326,-!p1@HEYL!0.89!6.71!HEYL;;chr4:174450089..174450153,-!p2@HAND2!0.89!6.71!HAND2;;chr10:131762504..131762555,-!p1@EBF3!0.89!6.71!EBF3;;chr20:50179368..50179392,-!p2@NFATC2!0.88!8.72!NFATC2;;chr1:164528384..164528409,+!p3@PBX1!0.87!20.79!PBX1;;chr1:23885981..23886002,-!p1@ID3!0.86!1168.36!ID3;;chr1:170633348..170633399,+!p2@PRRX1!0.86!8.72!PRRX1;;chr19:46801639..46801699,+!p1@HIF3A!0.85!6.04!HIF3A;;chr3:25469815..25469866,+!p3@RARB!0.85!6.04!RARB;;chrY:21906594..21906622,-!p1@KDM5D!0.85!6.04!KDM5D;;chr11:46299199..46299233,+!p1@CREB3L1!0.84!32.86!CREB3L1;;chr1:23696348..23696363,-!p4@ZNF436!0.84!6.71!ZNF436;;chr16:8962202..8962222,-!p3@CARHSP1!0.83!10.73!CARHSP1;;chr5:92918894..92918912,+!p2@NR2F1!0.82!19.45!NR2F1;;chr1:164528911..164528940,+!p7@PBX1!0.82!8.72!PBX1;;chr19:45260775..45260838,+!p5@BCL3!0.82!7.38!BCL3;;chr7:149470540..149470596,-!p2@ZNF467!0.81!7.38!ZNF467;;chr16:88519743..88519754,+!p2@ZFPM1!0.81!6.04!ZFPM1;;chr18:53068911..53068935,-!p4@TCF4!0.80!6.04!TCF4;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.80!5.37!SEBOX;;chr20:61051039..61051057,-!p1@GATA5!0.80!5.37!GATA5;;chr11:32457413..32457431,-!p2@WT1!0.80!5.37!WT1;;chr3:25470156..25470227,+!p2@RARB!0.80!5.37!RARB;;chr15:67418047..67418093,+!p4@SMAD3!0.79!6.71!SMAD3;;chr8:49833948..49833973,-!p2@SNAI2!0.77!34.21!SNAI2;;chr19:13134772..13134822,+!p2@NFIX!0.77!7.38!NFIX;;chr14:62162224..62162254,+!p1@HIF1A!0.76!762.59!HIF1A;;chr8:49833978..49833996,-!p1@SNAI2!0.76!109.32!SNAI2;;chr1:23696308..23696339,-!p2@ZNF436!0.76!10.73!ZNF436;;chr2:85980951..85981004,+!p1@ATOH8!0.76!8.05!ATOH8;;chrX:131545273..131545287,-!p17@MBNL3!0.76!4.69!MBNL3;;chr6:85473227..85473243,-!p5@TBX18!0.76!4.69!TBX18;;chr8:11561453..11561466,+!p2@GATA4!0.76!4.69!GATA4;;chr15:67430381..67430396,+!p21@SMAD3!0.76!4.69!SMAD3;;chr19:13213399..13213414,-!p6@LYL1!0.76!4.69!LYL1;;chr1:170632285..170632309,+!p1@PRRX1!0.75!5.37!PRRX1;;chr14:62203749..62203798,+!p5@HIF1A!0.74!7.38!HIF1A;;chr2:66662281..66662308,+!p1@MEIS1!0.73!16.77!MEIS1;;chr3:157823517..157823562,-!p1@SHOX2!0.73!4.69!SHOX2;;chr1:23696448..23696453,-!p5@ZNF436!0.72!5.37!ZNF436;;chr1:170632959..170632987,+!p4@PRRX1!0.72!4.69!PRRX1;;chr5:92918956..92918969,+!p4@NR2F1!0.72!4.69!NR2F1;;chr5:92919375..92919438,+!p6@NR2F1!0.72!4.69!NR2F1;;chr10:51572408..51572454,+!p3@NCOA4!0.71!26.83!NCOA4;;chr7:19157043..19157088,-!p2@TWIST1!0.71!11.40!TWIST1;;chr19:45971246..45971265,+!p1@FOSB!0.70!85.85!FOSB;;chr17:38498402..38498445,+!p3@RARA!0.70!16.10!RARA;;chr6:45296048..45296082,+!p1@RUNX2!0.70!4.69!RUNX2;;chr6:85474198..85474212,-!p3@TBX18!0.70!4.02!TBX18;;chr7:27170359..27170381,-!p1@HOXA4!0.70!4.02!HOXA4;;chr1:170632250..170632277,+!p7@PRRX1!0.70!4.02!PRRX1;;chr20:590944..590960,-!p1@TCF15!0.70!4.02!TCF15;;chr11:125034605..125034636,+!p2@PKNOX2!0.70!4.02!PKNOX2;;chr2:85981027..85981047,+!p8@ATOH8!0.70!4.02!ATOH8;;chr15:67418177..67418204,+!p9@SMAD3!0.70!4.02!SMAD3;;chr17:6926362..6926377,+!p1@BCL6B!0.70!4.02!BCL6B;;chr10:22292591..22292606,-!p2@DNAJC1!0.69!6.71!DNAJC1;;chr12:57504975..57505019,-!p2@STAT6!0.68!17.44!STAT6;;chr17:41622925..41622976,-!p3@ETV4!0.68!6.04!ETV4;;chr14:62203595..62203676,+!p4@HIF1A!0.67!7.38!HIF1A;;chr3:126076242..126076257,-!p1@KLF15!0.67!4.69!KLF15;;chr3:141087339..141087387,+!p2@ZBTB38!0.66!42.92!ZBTB38;;chr15:37392724..37392757,-!p1@MEIS2!0.66!18.78!MEIS2;;chr17:38498594..38498661,+!p2@RARA!0.66!13.41!RARA;;chr1:164528616..164528660,+!p5@PBX1!0.66!8.05!PBX1;;chr14:62213827..62213853,+!p6@HIF1A!0.66!5.37!HIF1A;;chr8:116681108..116681120,-!p9@TRPS1!0.66!4.69!TRPS1;;chr5:92918860..92918871,+!p10@NR2F1!0.66!4.02!NR2F1;;chr15:67418119..67418162,+!p5@SMAD3!0.66!4.02!SMAD3;;chr16:8962853..8962878,-!p1@CARHSP1!0.65!239.44!CARHSP1;;chr2:239756671..239756732,+!p1@TWIST2!0.65!12.74!TWIST2;;chr12:66218212..66218244,+!p5@HMGA2!0.65!5.37!HMGA2;;chr3:128206762..128206781,-!p2@GATA2!0.64!24.15!GATA2;;chr21:47063625..47063658,+!p1@PCBP3!0.64!16.77!PCBP3;;chr10:35484804..35484902,+!p2@CREM!0.64!14.76!CREM;;chr1:164528445..164528459,+!p2@PBX1!0.64!12.07!PBX1;;chr8:22550982..22550999,-!p1@EGR3!0.64!10.73!EGR3;;chr1:170632115..170632136,+!p9@PRRX1!0.64!3.35!PRRX1;;chr15:37386163..37386175,-!p52@MEIS2!0.64!3.35!MEIS2;;chr4:174451350..174451363,-!p3@HAND2!0.64!3.35!HAND2;;chr11:32456954..32456965,-!p4@WT1!0.64!3.35!WT1;;chr9:132427883..132427951,+!p2@PRRX2!0.64!3.35!PRRX2;;chr16:88519669..88519726,+!p1@ZFPM1!0.62!33.54!ZFPM1;;chr8:72756667..72756736,-!p2@MSC!0.62!5.37!MSC;;chr11:128563948..128564003,+!p1@FLI1!0.61!44.27!FLI1;;chr8:48650982..48651023,-!p3@CEBPD!0.61!8.72!CEBPD;;chr19:35455110..35455149,-!p1@ZNF792!0.61!6.71!ZNF792;;chr19:58987786..58987805,+!p3@ZNF446!0.61!4.69!ZNF446;;chr6:21593973..21593988,+!p1@SOX4!0.60!131.46!SOX4;;chr8:72756267..72756296,-!p4@MSC!0.60!4.69!MSC;;chr14:62213758..62213774,+!p8@HIF1A!0.60!4.02!HIF1A;;chr14:75745523..75745537,+!p1@FOS!0.59!430.59!FOS;;chr19:45251943..45252006,+!p1@BCL3!0.59!93.23!BCL3;;chr7:149470641..149470694,-!p1@ZNF467!0.59!15.43!ZNF467;;chr12:104532004..104532033,-!p4@NFYB!0.59!9.39!NFYB;;chr10:51572339..51572376,+!p4@NCOA4!0.59!7.38!NCOA4;;chr2:145282041..145282092,-!p8@ZEB2!0.59!4.69!ZEB2;;chr8:72756637..72756664,-!p3@MSC!0.59!3.35!MSC;;chr11:47279248..47279264,+!p3@NR1H3!0.59!3.35!NR1H3;;chr9:14083467..14083483,-!p4@NFIB!0.58!8.05!NFIB;;chr8:116681123..116681143,-!p4@TRPS1!0.58!6.04!TRPS1;;chr2:28618532..28618610,+!p4@FOSL2!0.58!5.37!FOSL2;;chr17:46622114..46622138,-!p4@HOXB2!0.58!4.69!HOXB2;;chr12:53614115..53614154,-!p1@RARG!0.57!17.44!RARG;;chr20:42543441..42543497,+!p1@TOX2!0.57!14.76!TOX2;;chr19:13134457..13134462,+!p5@NFIX!0.57!5.37!NFIX;;chr7:100076723..100076737,-!p3@TSC22D4!0.57!4.69!TSC22D4;;chr17:46621279..46621297,-!p13@HOXB2!0.57!2.68!HOXB2;;chr2:85980768..85980783,+!p10@ATOH8!0.57!2.68!ATOH8;;chr19:47523058..47523114,+!p1@NPAS1!0.57!2.68!NPAS1;;chr19:58545454..58545498,+!p1@ZSCAN1!0.57!2.68!ZSCAN1;;chr1:217262933..217262968,-!p3@ESRRG!0.57!2.68!ESRRG;;chr1:44513995..44514031,+!p1@KLF17!0.57!2.68!KLF17;;chr13:37494275..37494304,-!p2@SMAD9!0.57!2.68!SMAD9;;chr14:62214151..62214164,+!p11@HIF1A!0.57!2.68!HIF1A;;chr9:16705069..16705086,-!p3@BNC2!0.57!2.68!BNC2;;chr12:66218598..66218645,+!p2@HMGA2!0.56!14.76!HMGA2;;chr20:42543506..42543549,+!p2@TOX2!0.56!7.38!TOX2;;chr1:61924375..61924380,+!p6@NFIA!0.56!4.02!NFIA;;chr4:146436110..146436135,+!p6@SMAD1!0.56!4.02!SMAD1;;chr9:73028814..73028895,-!p1@KLF9!0.55!31.52!KLF9;;chr19:46272462..46272562,-!p1@SIX5!0.55!12.74!SIX5;;chr18:56532100..56532130,+!p1@ZNF532!0.55!5.37!ZNF532;;chr9:14082760..14082775,-!p6@NFIB!0.55!4.69!NFIB;;chr3:168864315..168864339,-!p2@MECOM!0.55!4.69!MECOM;;chr20:6748325..6748352,+!p1@BMP2!0.55!4.02!BMP2;;chr15:37392094..37392116,-!p6@MEIS2!0.55!3.35!MEIS2;;chr6:144329384..144329405,-!p1@PLAGL1!0.54!36.22!PLAGL1;;chr12:66218183..66218209,+!p4@HMGA2!0.54!5.37!HMGA2;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.54!4.69!MEIS3P1;;chr2:166326200..166326216,+!p1@CSRNP3!0.54!4.02!CSRNP3;;chr6:21597431..21597447,+!p8@SOX4!0.54!3.35!SOX4;;chr5:176738887..176738934,-!p1@MXD3!0.53!20.12!MXD3;;chr12:3069037..3069119,+!p2@TEAD4!0.53!10.06!TEAD4;;chr14:24837368..24837401,+!p1@NFATC4!0.53!6.71!NFATC4;;chr3:168865194..168865245,-!p3@MECOM!0.53!3.35!MECOM;;chr15:37392534..37392562,-!p10@MEIS2!0.53!2.68!MEIS2;;chr19:13213511..13213545,-!p2@LYL1!0.53!2.68!LYL1;;chr12:66218836..66218888,+!p1@HMGA2!0.52!27.50!HMGA2;;chr4:146402795..146402816,+!p7@SMAD1!0.52!3.35!SMAD1;;chr1:23886132..23886156,-!p2@ID3!0.52!2.68!ID3;;chr12:104531945..104531996,-!p1@NFYB!0.51!40.24!NFYB;;chr19:49865646..49865718,-!p1@TEAD2!0.51!24.82!TEAD2;;chr19:46272106..46272115,-!p3@SIX5!0.51!7.38!SIX5;;chr5:158526917..158526932,-!p1@EBF1!0.51!6.71!EBF1;;chr3:12329397..12329433,+!p2@PPARG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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000056;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000187;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000513;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000737;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002494;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000948;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002385;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007100
|ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000513
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor2.CNhs12350.11605-120I3.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor2.CNhs12350.11605-120I3.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor2.CNhs12350.11605-120I3.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor2.CNhs12350.11605-120I3.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Cardiac%2520Myocyte%252c%2520donor2.CNhs12350.11605-120I3.hg38.nobarcode.ctss.bed.gz
|id=FF:11605-120I3
|is_a=EFO:0002091;;FF:0000118
|is_obsolete=
|library_id=CNhs12350
|library_id_phase_based=2:CNhs12350
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11605
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11605
|name=Cardiac Myocyte, donor2
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs12350,LSID913,release011,COMPLETED
|profile_rnaseq=
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|rna_box=120
|rna_catalog_number=SC6205
|rna_concentration=0.626
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=
|rna_od260/230=
|rna_od260/280=
|rna_position=I3
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=120I3
|rna_weight_ug=10
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=cardiac muscle cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.41034485225487e-230!GO:0005737;cytoplasm;1.73392783204449e-203!GO:0043231;intracellular membrane-bound organelle;1.20409388299889e-179!GO:0043227;membrane-bound organelle;2.48411243912056e-179!GO:0043226;organelle;2.64849486486117e-178!GO:0043229;intracellular organelle;5.70574609386679e-178!GO:0044444;cytoplasmic part;1.13114808879196e-152!GO:0044422;organelle part;4.1406060930819e-135!GO:0044446;intracellular organelle part;1.08428585608502e-133!GO:0032991;macromolecular complex;1.16000073738014e-89!GO:0044237;cellular metabolic process;1.6359789280518e-88!GO:0044238;primary metabolic process;1.00944990117524e-86!GO:0030529;ribonucleoprotein complex;5.2304709024607e-86!GO:0005739;mitochondrion;6.60617373118517e-78!GO:0005515;protein binding;3.7617942778397e-75!GO:0043170;macromolecule metabolic process;5.03448191688291e-74!GO:0043233;organelle lumen;5.96509193523948e-69!GO:0031974;membrane-enclosed lumen;5.96509193523948e-69!GO:0003723;RNA binding;7.85103622704545e-63!GO:0044428;nuclear part;3.34676581363755e-60!GO:0005840;ribosome;1.12147216013814e-56!GO:0005634;nucleus;2.71577931280975e-56!GO:0031090;organelle membrane;3.1728080423645e-54!GO:0019538;protein metabolic process;4.12982284137939e-53!GO:0006412;translation;7.18018749499993e-52!GO:0044429;mitochondrial part;2.7921332826491e-50!GO:0009058;biosynthetic process;1.69849976674896e-49!GO:0003735;structural constituent of ribosome;2.23073927965315e-49!GO:0044260;cellular macromolecule metabolic process;3.27688083089637e-48!GO:0044267;cellular protein metabolic process;3.1515374953419e-47!GO:0044249;cellular biosynthetic process;3.35914369044988e-45!GO:0005829;cytosol;1.77514803144068e-43!GO:0033279;ribosomal subunit;2.33191791552265e-43!GO:0043234;protein complex;3.98757245840523e-43!GO:0009059;macromolecule biosynthetic process;9.43637594342805e-43!GO:0016043;cellular component organization and biogenesis;1.35196284674239e-42!GO:0006396;RNA processing;8.38744281171205e-42!GO:0031967;organelle envelope;3.09334100092549e-41!GO:0031975;envelope;7.4498800859153e-41!GO:0033036;macromolecule localization;2.1628287108793e-39!GO:0015031;protein transport;9.76994960767667e-39!GO:0008104;protein localization;1.51992370821282e-36!GO:0045184;establishment of protein localization;3.04181793221609e-36!GO:0031981;nuclear lumen;1.41563444037485e-35!GO:0016071;mRNA metabolic process;5.16619990421525e-34!GO:0043283;biopolymer metabolic process;3.46563196816621e-33!GO:0010467;gene expression;1.02329342090628e-32!GO:0005740;mitochondrial envelope;8.9179939381001e-32!GO:0008380;RNA splicing;9.58751517212395e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.01427495391178e-30!GO:0046907;intracellular transport;2.6885607812725e-30!GO:0065003;macromolecular complex assembly;4.18358512694634e-30!GO:0031966;mitochondrial membrane;1.041340563155e-29!GO:0019866;organelle inner membrane;5.03793401850839e-29!GO:0006397;mRNA processing;5.33979082363813e-29!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.04743951306243e-27!GO:0006886;intracellular protein transport;1.49922761898472e-27!GO:0005743;mitochondrial inner membrane;2.45321650493365e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.10457297026294e-27!GO:0006996;organelle organization and biogenesis;4.28500145122116e-27!GO:0022607;cellular component assembly;1.70073622237062e-26!GO:0043228;non-membrane-bound organelle;3.19109109770618e-26!GO:0043232;intracellular non-membrane-bound organelle;3.19109109770618e-26!GO:0005783;endoplasmic reticulum;9.27732373854311e-25!GO:0006119;oxidative phosphorylation;3.00578847363048e-24!GO:0044445;cytosolic part;3.71848439054796e-24!GO:0031980;mitochondrial lumen;2.54458238205885e-23!GO:0005759;mitochondrial matrix;2.54458238205885e-23!GO:0012505;endomembrane system;4.79908358426443e-23!GO:0015935;small ribosomal subunit;2.95048647503354e-22!GO:0015934;large ribosomal subunit;3.48677248022346e-22!GO:0044455;mitochondrial membrane part;5.59270646804711e-22!GO:0005681;spliceosome;1.99521527347847e-21!GO:0005654;nucleoplasm;2.12446182105629e-21!GO:0044432;endoplasmic reticulum part;6.33616177167687e-21!GO:0006457;protein folding;1.47740596015973e-20!GO:0005746;mitochondrial respiratory chain;1.48031898864569e-19!GO:0006259;DNA metabolic process;1.82955689802009e-19!GO:0051649;establishment of cellular localization;5.72647704544356e-19!GO:0051641;cellular localization;1.04116966008541e-18!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.10753581345185e-18!GO:0048770;pigment granule;1.0555176838631e-17!GO:0042470;melanosome;1.0555176838631e-17!GO:0000166;nucleotide binding;1.10198451204115e-17!GO:0050136;NADH dehydrogenase (quinone) activity;1.96324778475983e-17!GO:0003954;NADH dehydrogenase activity;1.96324778475983e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.96324778475983e-17!GO:0016462;pyrophosphatase activity;2.16339354495796e-17!GO:0051186;cofactor metabolic process;2.64877080257057e-17!GO:0007049;cell cycle;2.68584426980695e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.373754255656e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;4.17846832191762e-17!GO:0044451;nucleoplasm part;4.2538798197372e-17!GO:0022618;protein-RNA complex assembly;4.51326131571758e-17!GO:0005761;mitochondrial ribosome;7.95688607760424e-17!GO:0000313;organellar ribosome;7.95688607760424e-17!GO:0005794;Golgi apparatus;9.97444073978756e-17!GO:0017111;nucleoside-triphosphatase activity;1.23783045261565e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.50356223931506e-16!GO:0000502;proteasome complex (sensu Eukaryota);3.00900948647527e-16!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.74238875092682e-15!GO:0008134;transcription factor binding;2.36938373919686e-15!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.37454220228047e-15!GO:0005730;nucleolus;2.56083390555806e-15!GO:0030964;NADH dehydrogenase complex (quinone);2.59720867203968e-15!GO:0045271;respiratory chain complex I;2.59720867203968e-15!GO:0005747;mitochondrial respiratory chain complex I;2.59720867203968e-15!GO:0042775;organelle ATP synthesis coupled electron transport;2.59720867203968e-15!GO:0042773;ATP synthesis coupled electron transport;2.59720867203968e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.01393850852233e-15!GO:0006605;protein targeting;5.03967407280514e-15!GO:0005789;endoplasmic reticulum membrane;6.06859294403812e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.6757754710558e-15!GO:0016874;ligase activity;1.2110311481602e-14!GO:0008135;translation factor activity, nucleic acid binding;2.01583536685577e-14!GO:0003676;nucleic acid binding;4.20932458140311e-14!GO:0044265;cellular macromolecule catabolic process;6.68802765797698e-14!GO:0044248;cellular catabolic process;6.94513720132131e-14!GO:0022402;cell cycle process;1.53279052596117e-13!GO:0006732;coenzyme metabolic process;1.87524133835222e-13!GO:0043285;biopolymer catabolic process;1.96853235443477e-13!GO:0051082;unfolded protein binding;2.78876575132344e-13!GO:0009055;electron carrier activity;5.41766553016842e-13!GO:0009057;macromolecule catabolic process;5.59017827206081e-13!GO:0016491;oxidoreductase activity;1.1146167599543e-12!GO:0006512;ubiquitin cycle;1.2271271819746e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;2.29860191535654e-12!GO:0000375;RNA splicing, via transesterification reactions;2.29860191535654e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.29860191535654e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;2.43125581370528e-12!GO:0017076;purine nucleotide binding;2.80500818632762e-12!GO:0048193;Golgi vesicle transport;3.11186307602705e-12!GO:0012501;programmed cell death;4.21383180939536e-12!GO:0019941;modification-dependent protein catabolic process;4.61839153634942e-12!GO:0043632;modification-dependent macromolecule catabolic process;4.61839153634942e-12!GO:0000278;mitotic cell cycle;4.75059204736935e-12!GO:0048523;negative regulation of cellular process;4.81831579127724e-12!GO:0044257;cellular protein catabolic process;6.17387512465569e-12!GO:0006511;ubiquitin-dependent protein catabolic process;7.58892186122175e-12!GO:0032553;ribonucleotide binding;8.25336087107492e-12!GO:0032555;purine ribonucleotide binding;8.25336087107492e-12!GO:0016192;vesicle-mediated transport;8.77688048032723e-12!GO:0005793;ER-Golgi intermediate compartment;1.20372037577444e-11!GO:0006915;apoptosis;1.32819399264145e-11!GO:0016070;RNA metabolic process;2.55092614333123e-11!GO:0008219;cell death;3.01415921119166e-11!GO:0016265;death;3.01415921119166e-11!GO:0003743;translation initiation factor activity;3.01415921119166e-11!GO:0006413;translational initiation;3.62010238261464e-11!GO:0030163;protein catabolic process;4.69352518574053e-11!GO:0042254;ribosome biogenesis and assembly;7.36307352937204e-11!GO:0043412;biopolymer modification;9.10533029868554e-11!GO:0005635;nuclear envelope;1.18742817511519e-10!GO:0048519;negative regulation of biological process;4.36377121847074e-10!GO:0003712;transcription cofactor activity;5.04623505449402e-10!GO:0006913;nucleocytoplasmic transport;5.22961032941249e-10!GO:0006446;regulation of translational initiation;5.95520926783217e-10!GO:0009259;ribonucleotide metabolic process;6.49556131251518e-10!GO:0006163;purine nucleotide metabolic process;6.64649150610466e-10!GO:0000074;regulation of progression through cell cycle;8.90640553910715e-10!GO:0009150;purine ribonucleotide metabolic process;8.98170844128992e-10!GO:0006464;protein modification process;9.07585771856244e-10!GO:0051276;chromosome organization and biogenesis;9.83512140530829e-10!GO:0051726;regulation of cell cycle;1.07566030008772e-09!GO:0051169;nuclear transport;1.17810903137936e-09!GO:0008565;protein transporter activity;1.19226945431101e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.50835528932417e-09!GO:0006974;response to DNA damage stimulus;1.75700952216161e-09!GO:0030554;adenyl nucleotide binding;1.84291425045861e-09!GO:0006164;purine nucleotide biosynthetic process;2.88982322075212e-09!GO:0016604;nuclear body;3.03447377777639e-09!GO:0005694;chromosome;3.03447377777639e-09!GO:0005524;ATP binding;3.50511519776068e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.69392793238555e-09!GO:0065004;protein-DNA complex assembly;3.91472025015474e-09!GO:0032559;adenyl ribonucleotide binding;3.97818779532498e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.299689577972e-09!GO:0009060;aerobic respiration;4.46198578965523e-09!GO:0016887;ATPase activity;5.51409799625402e-09!GO:0006366;transcription from RNA polymerase II promoter;6.17353042507047e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.21625817659438e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;6.39788316551924e-09!GO:0009056;catabolic process;8.1234335637475e-09!GO:0009260;ribonucleotide biosynthetic process;8.83826619738398e-09!GO:0031965;nuclear membrane;9.16248854465358e-09!GO:0044427;chromosomal part;9.40477657022446e-09!GO:0042623;ATPase activity, coupled;1.11978558051362e-08!GO:0017038;protein import;1.12778840321277e-08!GO:0044453;nuclear membrane part;1.22754576853408e-08!GO:0051188;cofactor biosynthetic process;1.24174650951835e-08!GO:0006399;tRNA metabolic process;1.3723865440931e-08!GO:0045333;cellular respiration;1.73225660499038e-08!GO:0009141;nucleoside triphosphate metabolic process;1.86896087444439e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.9011167058992e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.9011167058992e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.94899255877164e-08!GO:0006323;DNA packaging;1.98432483366996e-08!GO:0015986;ATP synthesis coupled proton transport;2.51103687538652e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.51103687538652e-08!GO:0005788;endoplasmic reticulum lumen;3.8115416931031e-08!GO:0006091;generation of precursor metabolites and energy;3.91019253819474e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.16458980356497e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.16458980356497e-08!GO:0000087;M phase of mitotic cell cycle;4.29953440054636e-08!GO:0009142;nucleoside triphosphate biosynthetic process;4.36980849314627e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.36980849314627e-08!GO:0006461;protein complex assembly;5.31133545598046e-08!GO:0007067;mitosis;5.36622189944219e-08!GO:0016853;isomerase activity;6.45294399786517e-08!GO:0019829;cation-transporting ATPase activity;7.35020844841417e-08!GO:0043687;post-translational protein modification;9.90405269488385e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.10746417044546e-07!GO:0043067;regulation of programmed cell death;1.21158060815423e-07!GO:0022403;cell cycle phase;1.24301417432104e-07!GO:0048475;coated membrane;1.31620674191553e-07!GO:0030117;membrane coat;1.31620674191553e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.33598901948578e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.33598901948578e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.33598901948578e-07!GO:0006099;tricarboxylic acid cycle;1.33598901948578e-07!GO:0046356;acetyl-CoA catabolic process;1.33598901948578e-07!GO:0006333;chromatin assembly or disassembly;1.33958669342134e-07!GO:0042981;regulation of apoptosis;1.35634597231252e-07!GO:0009719;response to endogenous stimulus;1.38101068102562e-07!GO:0009117;nucleotide metabolic process;1.54464885504935e-07!GO:0005839;proteasome core complex (sensu Eukaryota);1.55310989688672e-07!GO:0051301;cell division;1.82298956523865e-07!GO:0008639;small protein conjugating enzyme activity;1.86881215625182e-07!GO:0006364;rRNA processing;2.16360592407551e-07!GO:0006888;ER to Golgi vesicle-mediated transport;2.16502889843868e-07!GO:0046034;ATP metabolic process;2.40046684750863e-07!GO:0051187;cofactor catabolic process;2.66270746664516e-07!GO:0006084;acetyl-CoA metabolic process;2.83910782262274e-07!GO:0043038;amino acid activation;3.00492275760239e-07!GO:0006418;tRNA aminoacylation for protein translation;3.00492275760239e-07!GO:0043039;tRNA aminoacylation;3.00492275760239e-07!GO:0030120;vesicle coat;3.07140515528146e-07!GO:0030662;coated vesicle membrane;3.07140515528146e-07!GO:0015078;hydrogen ion transmembrane transporter activity;3.19830699884446e-07!GO:0016607;nuclear speck;3.41931753174554e-07!GO:0016072;rRNA metabolic process;3.46522890376214e-07!GO:0065002;intracellular protein transport across a membrane;3.5513453194902e-07!GO:0004842;ubiquitin-protein ligase activity;3.58715939549394e-07!GO:0006281;DNA repair;3.95117414363647e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.14807678500857e-07!GO:0006754;ATP biosynthetic process;4.39760349248133e-07!GO:0006753;nucleoside phosphate metabolic process;4.39760349248133e-07!GO:0000785;chromatin;4.40491352909821e-07!GO:0003924;GTPase activity;4.59928135525585e-07!GO:0045786;negative regulation of progression through cell cycle;5.02643993234219e-07!GO:0051246;regulation of protein metabolic process;5.66796753237253e-07!GO:0009109;coenzyme catabolic process;5.75820978061043e-07!GO:0043069;negative regulation of programmed cell death;6.51811035425564e-07!GO:0016787;hydrolase activity;8.23788170890646e-07!GO:0044431;Golgi apparatus part;8.94203277772014e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.55111465018212e-07!GO:0006334;nucleosome assembly;1.0103509653704e-06!GO:0050794;regulation of cellular process;1.08573851642501e-06!GO:0004298;threonine endopeptidase activity;1.09272189098104e-06!GO:0019787;small conjugating protein ligase activity;1.29606664308685e-06!GO:0009108;coenzyme biosynthetic process;1.30272373148138e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.35081059038319e-06!GO:0005762;mitochondrial large ribosomal subunit;1.45073484644684e-06!GO:0000315;organellar large ribosomal subunit;1.45073484644684e-06!GO:0005643;nuclear pore;1.4564415289063e-06!GO:0043066;negative regulation of apoptosis;1.62385468578826e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.65146459112705e-06!GO:0005773;vacuole;1.7544835929123e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.82430278019117e-06!GO:0031988;membrane-bound vesicle;1.82683503920932e-06!GO:0046930;pore complex;1.99263909621396e-06!GO:0006260;DNA replication;2.32070390841729e-06!GO:0004386;helicase activity;2.34025853515017e-06!GO:0031252;leading edge;2.39544417154077e-06!GO:0045259;proton-transporting ATP synthase complex;2.68787546225136e-06!GO:0031497;chromatin assembly;2.90676984188556e-06!GO:0016859;cis-trans isomerase activity;3.01509233491676e-06!GO:0008026;ATP-dependent helicase activity;3.81855586593e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;3.85772236241206e-06!GO:0051170;nuclear import;4.14347451104248e-06!GO:0005768;endosome;5.00765173015788e-06!GO:0016740;transferase activity;5.2815466640588e-06!GO:0031324;negative regulation of cellular metabolic process;5.44939597632424e-06!GO:0005667;transcription factor complex;5.47398914165476e-06!GO:0006916;anti-apoptosis;6.34625465801359e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.84737552415248e-06!GO:0031982;vesicle;8.09435528555896e-06!GO:0008654;phospholipid biosynthetic process;8.13398266228671e-06!GO:0031410;cytoplasmic vesicle;8.74700011335765e-06!GO:0043566;structure-specific DNA binding;8.8772138692471e-06!GO:0016563;transcription activator activity;9.11069592645293e-06!GO:0007005;mitochondrion organization and biogenesis;9.11525054904743e-06!GO:0003714;transcription corepressor activity;9.18263337165184e-06!GO:0000245;spliceosome assembly;9.3544092205473e-06!GO:0006606;protein import into nucleus;9.62947628006179e-06!GO:0006752;group transfer coenzyme metabolic process;9.67380835667706e-06!GO:0016881;acid-amino acid ligase activity;1.26952836709885e-05!GO:0003697;single-stranded DNA binding;1.29204706871609e-05!GO:0006793;phosphorus metabolic process;1.29846074396216e-05!GO:0006796;phosphate metabolic process;1.29846074396216e-05!GO:0006403;RNA localization;1.30511981616342e-05!GO:0045454;cell redox homeostasis;1.34800035674814e-05!GO:0050657;nucleic acid transport;1.52657054617192e-05!GO:0051236;establishment of RNA localization;1.52657054617192e-05!GO:0050658;RNA transport;1.52657054617192e-05!GO:0000279;M phase;1.57297043573744e-05!GO:0016310;phosphorylation;1.64379759234115e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.64379759234115e-05!GO:0000323;lytic vacuole;1.64379759234115e-05!GO:0005764;lysosome;1.64379759234115e-05!GO:0006613;cotranslational protein targeting to membrane;1.80158663599279e-05!GO:0048522;positive regulation of cellular process;1.84243841373067e-05!GO:0016049;cell growth;2.06034328017875e-05!GO:0008361;regulation of cell size;2.0862904068042e-05!GO:0019843;rRNA binding;2.22857167932211e-05!GO:0030867;rough endoplasmic reticulum membrane;3.44156996871506e-05!GO:0003713;transcription coactivator activity;3.4691006621592e-05!GO:0000314;organellar small ribosomal subunit;3.52534643035433e-05!GO:0005763;mitochondrial small ribosomal subunit;3.52534643035433e-05!GO:0032446;protein modification by small protein conjugation;3.66266527540704e-05!GO:0016564;transcription repressor activity;3.66266527540704e-05!GO:0000151;ubiquitin ligase complex;3.8546467977552e-05!GO:0000139;Golgi membrane;3.9144724984381e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.18750015229463e-05!GO:0031968;organelle outer membrane;4.41066420670373e-05!GO:0015980;energy derivation by oxidation of organic compounds;4.52319635197765e-05!GO:0016567;protein ubiquitination;4.80252268745835e-05!GO:0005770;late endosome;4.88931531278475e-05!GO:0005525;GTP binding;5.25934420344014e-05!GO:0015630;microtubule cytoskeleton;5.31279947435795e-05!GO:0008610;lipid biosynthetic process;5.61687719675004e-05!GO:0019867;outer membrane;5.77325406908212e-05!GO:0001558;regulation of cell growth;6.24434695878945e-05!GO:0016568;chromatin modification;6.86170995812282e-05!GO:0009892;negative regulation of metabolic process;6.96036346209174e-05!GO:0005798;Golgi-associated vesicle;7.89172108840725e-05!GO:0030036;actin cytoskeleton organization and biogenesis;8.02771573962931e-05!GO:0043021;ribonucleoprotein binding;8.62035926180859e-05!GO:0006612;protein targeting to membrane;9.30424960197065e-05!GO:0003724;RNA helicase activity;9.94760662892526e-05!GO:0043623;cellular protein complex assembly;0.000108516094462969!GO:0009165;nucleotide biosynthetic process;0.00011622045907354!GO:0044262;cellular carbohydrate metabolic process;0.000123998961082039!GO:0050789;regulation of biological process;0.000137020607919499!GO:0005741;mitochondrial outer membrane;0.000148116400964307!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000149250015965798!GO:0005791;rough endoplasmic reticulum;0.000156334639324629!GO:0044440;endosomal part;0.000177099418812466!GO:0010008;endosome membrane;0.000177099418812466!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000190034183561997!GO:0006082;organic acid metabolic process;0.000199701186962416!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000202710780554191!GO:0016126;sterol biosynthetic process;0.000207185030060043!GO:0006118;electron transport;0.000224585267956234!GO:0019752;carboxylic acid metabolic process;0.000224851784250326!GO:0032561;guanyl ribonucleotide binding;0.000233423091482265!GO:0019001;guanyl nucleotide binding;0.000233423091482265!GO:0051028;mRNA transport;0.000243854273046332!GO:0016779;nucleotidyltransferase activity;0.000262209218665237!GO:0050662;coenzyme binding;0.000263040166650595!GO:0033116;ER-Golgi intermediate compartment membrane;0.000271974460446!GO:0007243;protein kinase cascade;0.0002901624023386!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000295502959013874!GO:0051427;hormone receptor binding;0.000295502959013874!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000302796241143742!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000342692726481365!GO:0016481;negative regulation of transcription;0.000369487440800809!GO:0051789;response to protein stimulus;0.000390047440509112!GO:0006986;response to unfolded protein;0.000390047440509112!GO:0008250;oligosaccharyl transferase complex;0.000393480291443891!GO:0046474;glycerophospholipid biosynthetic process;0.000400971730954276!GO:0030176;integral to endoplasmic reticulum membrane;0.000424185532274438!GO:0051329;interphase of mitotic cell cycle;0.000424959372008169!GO:0005885;Arp2/3 protein complex;0.00048072264937326!GO:0004576;oligosaccharyl transferase activity;0.000483694074133364!GO:0005813;centrosome;0.000488723303171532!GO:0030133;transport vesicle;0.000539414983361069!GO:0048518;positive regulation of biological process;0.00055114224116326!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000559450421182229!GO:0035257;nuclear hormone receptor binding;0.000582051180162015!GO:0030029;actin filament-based process;0.000583544916733023!GO:0043681;protein import into mitochondrion;0.000609966605349959!GO:0005048;signal sequence binding;0.000618207654449399!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000628591573065426!GO:0000786;nucleosome;0.000639957058072802!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000649535241028084!GO:0019899;enzyme binding;0.000685108360289846!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000694541456627346!GO:0005905;coated pit;0.000713426351180783!GO:0051920;peroxiredoxin activity;0.000743367902612494!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00076760508796582!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000860751200925621!GO:0015399;primary active transmembrane transporter activity;0.000860751200925621!GO:0051325;interphase;0.000921759085439189!GO:0018196;peptidyl-asparagine modification;0.000944549272414866!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000944549272414866!GO:0016044;membrane organization and biogenesis;0.000955147011590503!GO:0005815;microtubule organizing center;0.000974001615798928!GO:0030663;COPI coated vesicle membrane;0.00100112737988058!GO:0030126;COPI vesicle coat;0.00100112737988058!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00100691085744465!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00100691085744465!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00100691085744465!GO:0030027;lamellipodium;0.00101816364030031!GO:0006414;translational elongation;0.00111549340404316!GO:0008186;RNA-dependent ATPase activity;0.00118627503096579!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00135009819517131!GO:0003899;DNA-directed RNA polymerase activity;0.00136888246115542!GO:0007050;cell cycle arrest;0.00145413164994684!GO:0006979;response to oxidative stress;0.00162472064913367!GO:0046467;membrane lipid biosynthetic process;0.00162718647283726!GO:0007010;cytoskeleton organization and biogenesis;0.00174869105261088!GO:0030118;clathrin coat;0.00179667160988122!GO:0030137;COPI-coated vesicle;0.00182137702284423!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00183845700914315!GO:0015002;heme-copper terminal oxidase activity;0.00183845700914315!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00183845700914315!GO:0004129;cytochrome-c oxidase activity;0.00183845700914315!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00186725866562529!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00186725866562529!GO:0006695;cholesterol biosynthetic process;0.00189985948767649!GO:0003729;mRNA binding;0.00191495073402383!GO:0051087;chaperone binding;0.00191784510438666!GO:0051287;NAD binding;0.00191784510438666!GO:0005819;spindle;0.00194487985448585!GO:0044255;cellular lipid metabolic process;0.00196071552629407!GO:0043488;regulation of mRNA stability;0.00201167086961711!GO:0043487;regulation of RNA stability;0.00201167086961711!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0020255048035729!GO:0051252;regulation of RNA metabolic process;0.00206665332554698!GO:0048037;cofactor binding;0.00215000674905905!GO:0006950;response to stress;0.00221724661329556!GO:0008632;apoptotic program;0.00222148607734419!GO:0005769;early endosome;0.00224596183587183!GO:0031072;heat shock protein binding;0.00237979258998466!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00255317715172609!GO:0007006;mitochondrial membrane organization and biogenesis;0.00261779247594702!GO:0030659;cytoplasmic vesicle membrane;0.00277253944168077!GO:0046489;phosphoinositide biosynthetic process;0.00277446554280977!GO:0006626;protein targeting to mitochondrion;0.00280166405829137!GO:0007040;lysosome organization and biogenesis;0.0029225225756031!GO:0004004;ATP-dependent RNA helicase activity;0.00303100800651275!GO:0051101;regulation of DNA binding;0.00313102375323353!GO:0043284;biopolymer biosynthetic process;0.00315857645275583!GO:0003690;double-stranded DNA binding;0.00323616215302229!GO:0040008;regulation of growth;0.00331578079116322!GO:0006509;membrane protein ectodomain proteolysis;0.0033958978565024!GO:0033619;membrane protein proteolysis;0.0033958978565024!GO:0048500;signal recognition particle;0.00366804431313472!GO:0016363;nuclear matrix;0.0037732589904051!GO:0007051;spindle organization and biogenesis;0.00394291824410649!GO:0016860;intramolecular oxidoreductase activity;0.00402627387876038!GO:0004177;aminopeptidase activity;0.00426840136279809!GO:0022890;inorganic cation transmembrane transporter activity;0.00442930111200633!GO:0006740;NADPH regeneration;0.00448564768148623!GO:0006098;pentose-phosphate shunt;0.00448564768148623!GO:0031301;integral to organelle membrane;0.00449276565819536!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00455962462879576!GO:0008180;signalosome;0.00470991879172266!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00472386222677898!GO:0046483;heterocycle metabolic process;0.00480993640465388!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00483653215728551!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00483653215728551!GO:0051539;4 iron, 4 sulfur cluster binding;0.00491862482757729!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00498418060127767!GO:0030658;transport vesicle membrane;0.00500899566892787!GO:0051168;nuclear export;0.00504247557087835!GO:0006402;mRNA catabolic process;0.00514193393407423!GO:0006352;transcription initiation;0.00517375461602715!GO:0015992;proton transport;0.00540707419681495!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00541674837989693!GO:0030119;AP-type membrane coat adaptor complex;0.00542569164845462!GO:0042802;identical protein binding;0.00542569164845462!GO:0003746;translation elongation factor activity;0.00547264994597734!GO:0045941;positive regulation of transcription;0.00549255116856272!GO:0065009;regulation of a molecular function;0.00557328643787824!GO:0043492;ATPase activity, coupled to movement of substances;0.00590041437784529!GO:0005684;U2-dependent spliceosome;0.00592965407915859!GO:0006818;hydrogen transport;0.00597495285922152!GO:0006778;porphyrin metabolic process;0.00599684195038801!GO:0033013;tetrapyrrole metabolic process;0.00599684195038801!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00629097439190098!GO:0006790;sulfur metabolic process;0.00666700736270666!GO:0008139;nuclear localization sequence binding;0.006688175203692!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00683833819010904!GO:0017166;vinculin binding;0.0069801428178859!GO:0008033;tRNA processing;0.00702287419019244!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00734517438736989!GO:0006383;transcription from RNA polymerase III promoter;0.00745828053697319!GO:0035258;steroid hormone receptor binding;0.00746393874633469!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00746393874633469!GO:0006643;membrane lipid metabolic process;0.00754100387926561!GO:0006650;glycerophospholipid metabolic process;0.00773436634392726!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00780260965215006!GO:0045047;protein targeting to ER;0.00780260965215006!GO:0007033;vacuole organization and biogenesis;0.00787788890705307!GO:0016408;C-acyltransferase activity;0.00796732171487721!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00796732171487721!GO:0048468;cell development;0.00797398502361071!GO:0045893;positive regulation of transcription, DNA-dependent;0.00835303792466605!GO:0006520;amino acid metabolic process;0.00852417334966003!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00862071317773443!GO:0030132;clathrin coat of coated pit;0.0086245593137343!GO:0048487;beta-tubulin binding;0.00874416070301018!GO:0003711;transcription elongation regulator activity;0.00877516550349007!GO:0030131;clathrin adaptor complex;0.00879174897064408!GO:0005774;vacuolar membrane;0.00887159238494029!GO:0030134;ER to Golgi transport vesicle;0.00887874537611658!GO:0015631;tubulin binding;0.00889258195715155!GO:0008312;7S RNA binding;0.00902070993559916!GO:0001726;ruffle;0.00902605661886172!GO:0044433;cytoplasmic vesicle part;0.0098852661407838!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0100705014940238!GO:0045792;negative regulation of cell size;0.0101162069961394!GO:0000096;sulfur amino acid metabolic process;0.0101162069961394!GO:0016272;prefoldin complex;0.0101952165055683!GO:0031272;regulation of pseudopodium formation;0.0103983265901857!GO:0031269;pseudopodium formation;0.0103983265901857!GO:0031344;regulation of cell projection organization and biogenesis;0.0103983265901857!GO:0031268;pseudopodium organization and biogenesis;0.0103983265901857!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0103983265901857!GO:0031274;positive regulation of pseudopodium formation;0.0103983265901857!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0107509690491647!GO:0005869;dynactin complex;0.0107847428931934!GO:0009967;positive regulation of signal transduction;0.0108760316545733!GO:0030308;negative regulation of cell growth;0.0109808488699794!GO:0000059;protein import into nucleus, docking;0.0111428662087646!GO:0006401;RNA catabolic process;0.0112106899135109!GO:0030127;COPII vesicle coat;0.0112106899135109!GO:0012507;ER to Golgi transport vesicle membrane;0.0112106899135109!GO:0065007;biological regulation;0.0120446336805604!GO:0006839;mitochondrial transport;0.0120463470171511!GO:0006891;intra-Golgi vesicle-mediated transport;0.0122894652782411!GO:0006595;polyamine metabolic process;0.0123187002580829!GO:0022415;viral reproductive process;0.0124184012266508!GO:0030660;Golgi-associated vesicle membrane;0.0126445603060109!GO:0006807;nitrogen compound metabolic process;0.0129737889580969!GO:0031902;late endosome membrane;0.0132399826644571!GO:0030041;actin filament polymerization;0.013514821448774!GO:0030521;androgen receptor signaling pathway;0.013559712985741!GO:0043022;ribosome binding;0.0135872932175908!GO:0043065;positive regulation of apoptosis;0.0135872932175908!GO:0045892;negative regulation of transcription, DNA-dependent;0.0136939971531212!GO:0015036;disulfide oxidoreductase activity;0.0139250891652402!GO:0005637;nuclear inner membrane;0.0143324934330348!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0145140828298201!GO:0030384;phosphoinositide metabolic process;0.0147089933969522!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0149652181268328!GO:0008168;methyltransferase activity;0.0152234623341308!GO:0030569;chymotrypsin inhibitor activity;0.0153463992382142!GO:0006739;NADP metabolic process;0.0154967969352578!GO:0044452;nucleolar part;0.0159505467441488!GO:0043068;positive regulation of programmed cell death;0.0160629989801111!GO:0006779;porphyrin biosynthetic process;0.0160629989801111!GO:0033014;tetrapyrrole biosynthetic process;0.0160629989801111!GO:0009081;branched chain family amino acid metabolic process;0.0161195429464062!GO:0006417;regulation of translation;0.0164713792695826!GO:0042168;heme metabolic process;0.0164713792695826!GO:0015248;sterol transporter activity;0.0168696086335382!GO:0006635;fatty acid beta-oxidation;0.0171450358157758!GO:0016125;sterol metabolic process;0.0173262323738581!GO:0006629;lipid metabolic process;0.0173987024298675!GO:0005832;chaperonin-containing T-complex;0.0174734377680575!GO:0030518;steroid hormone receptor signaling pathway;0.0175864089385469!GO:0016741;transferase activity, transferring one-carbon groups;0.0176672624856587!GO:0030031;cell projection biogenesis;0.0180039849826241!GO:0044438;microbody part;0.0180594798769498!GO:0044439;peroxisomal part;0.0180594798769498!GO:0008629;induction of apoptosis by intracellular signals;0.0180612252005622!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0180612252005622!GO:0051540;metal cluster binding;0.0182341338042799!GO:0051536;iron-sulfur cluster binding;0.0182341338042799!GO:0031529;ruffle organization and biogenesis;0.0186663917691712!GO:0012506;vesicle membrane;0.0188474998750053!GO:0046822;regulation of nucleocytoplasmic transport;0.0189399254139886!GO:0043407;negative regulation of MAP kinase activity;0.0191360976198985!GO:0030145;manganese ion binding;0.0193505425816786!GO:0044437;vacuolar part;0.0194930580371886!GO:0051098;regulation of binding;0.0199299860387236!GO:0000339;RNA cap binding;0.0205557535644934!GO:0016584;nucleosome positioning;0.0206786829360477!GO:0006261;DNA-dependent DNA replication;0.0206786829360477!GO:0046519;sphingoid metabolic process;0.0207476331289842!GO:0019222;regulation of metabolic process;0.0207929695156407!GO:0009116;nucleoside metabolic process;0.0209422427445949!GO:0005765;lysosomal membrane;0.0212929936812396!GO:0003684;damaged DNA binding;0.0219072663863782!GO:0033673;negative regulation of kinase activity;0.0221520902986001!GO:0006469;negative regulation of protein kinase activity;0.0221520902986001!GO:0031124;mRNA 3'-end processing;0.0223314070970929!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0226809772991637!GO:0000775;chromosome, pericentric region;0.0227182057259075!GO:0030880;RNA polymerase complex;0.0227182057259075!GO:0003682;chromatin binding;0.023050516294139!GO:0006733;oxidoreduction coenzyme metabolic process;0.0237254040250985!GO:0006066;alcohol metabolic process;0.0240357616084635!GO:0031903;microbody membrane;0.0243492145898793!GO:0005778;peroxisomal membrane;0.0243492145898793!GO:0031418;L-ascorbic acid binding;0.0245608792687666!GO:0006644;phospholipid metabolic process;0.0246632253504011!GO:0008147;structural constituent of bone;0.0247812198839331!GO:0007346;regulation of progression through mitotic cell cycle;0.0248931744790822!GO:0016197;endosome transport;0.0248931744790822!GO:0003756;protein disulfide isomerase activity;0.0252481211360435!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0252481211360435!GO:0031625;ubiquitin protein ligase binding;0.0254982035609907!GO:0009308;amine metabolic process;0.026017093554341!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0264259740878031!GO:0006720;isoprenoid metabolic process;0.0265465349442956!GO:0006302;double-strand break repair;0.026811569259468!GO:0030833;regulation of actin filament polymerization;0.026811569259468!GO:0005777;peroxisome;0.0274584054646204!GO:0042579;microbody;0.0274584054646204!GO:0001666;response to hypoxia;0.0275887648572134!GO:0031300;intrinsic to organelle membrane;0.0275887648572134!GO:0000082;G1/S transition of mitotic cell cycle;0.0277260011973643!GO:0006897;endocytosis;0.0279594176411806!GO:0010324;membrane invagination;0.0279594176411806!GO:0050178;phenylpyruvate tautomerase activity;0.0282014001471015!GO:0006672;ceramide metabolic process;0.0283231464476613!GO:0007021;tubulin folding;0.0290263911072955!GO:0051128;regulation of cellular component organization and biogenesis;0.0290263911072955!GO:0030032;lamellipodium biogenesis;0.0292372295514128!GO:0031543;peptidyl-proline dioxygenase activity;0.0292626383544477!GO:0005862;muscle thin filament tropomyosin;0.0293840042918303!GO:0006289;nucleotide-excision repair;0.0294630896150959!GO:0050681;androgen receptor binding;0.0299819830562738!GO:0003702;RNA polymerase II transcription factor activity;0.0301918825898224!GO:0047485;protein N-terminus binding;0.0304777140729914!GO:0051348;negative regulation of transferase activity;0.030903913122256!GO:0005586;collagen type III;0.0312848367395923!GO:0006506;GPI anchor biosynthetic process;0.0318890601324204!GO:0030125;clathrin vesicle coat;0.0318890601324204!GO:0030665;clathrin coated vesicle membrane;0.0318890601324204!GO:0032507;maintenance of cellular protein localization;0.0319508946542731!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.03201393880098!GO:0008154;actin polymerization and/or depolymerization;0.0321168125209668!GO:0006007;glucose catabolic process;0.0321168125209668!GO:0048144;fibroblast proliferation;0.0321991920614409!GO:0048145;regulation of fibroblast proliferation;0.0321991920614409!GO:0005758;mitochondrial intermembrane space;0.0328585296971832!GO:0008538;proteasome activator activity;0.0329822192256448!GO:0008047;enzyme activator activity;0.0329823692913785!GO:0006607;NLS-bearing substrate import into nucleus;0.0332916762366745!GO:0043433;negative regulation of transcription factor activity;0.0336670787590467!GO:0004448;isocitrate dehydrogenase activity;0.0337045704078223!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0340639333468024!GO:0005657;replication fork;0.0343475381988425!GO:0035035;histone acetyltransferase binding;0.0343882751154098!GO:0006693;prostaglandin metabolic process;0.03480442302232!GO:0006692;prostanoid metabolic process;0.03480442302232!GO:0007034;vacuolar transport;0.0349952964301329!GO:0007162;negative regulation of cell adhesion;0.0355754413366864!GO:0006505;GPI anchor metabolic process;0.035626730165094!GO:0000075;cell cycle checkpoint;0.0360244799063005!GO:0051235;maintenance of localization;0.0360444076617859!GO:0009112;nucleobase metabolic process;0.0363518188092823!GO:0048146;positive regulation of fibroblast proliferation;0.0363573040457217!GO:0000049;tRNA binding;0.036423896415087!GO:0048471;perinuclear region of cytoplasm;0.0364726180611233!GO:0022408;negative regulation of cell-cell adhesion;0.0364726180611233!GO:0030522;intracellular receptor-mediated signaling pathway;0.036731440037181!GO:0009303;rRNA transcription;0.0368825744591106!GO:0006354;RNA elongation;0.0368872179131987!GO:0051270;regulation of cell motility;0.0368872179131987!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0371369709835378!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0376252643602335!GO:0032906;transforming growth factor-beta2 production;0.0376252643602335!GO:0032909;regulation of transforming growth factor-beta2 production;0.0376252643602335!GO:0031970;organelle envelope lumen;0.038047278956407!GO:0006518;peptide metabolic process;0.0387762959195875!GO:0009889;regulation of biosynthetic process;0.0388300042280122!GO:0005784;translocon complex;0.03909443467722!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0398799090558175!GO:0030508;thiol-disulfide exchange intermediate activity;0.0399900001037914!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0410151954058747!GO:0006769;nicotinamide metabolic process;0.0410210793583318!GO:0017127;cholesterol transporter activity;0.0414842298884356!GO:0006338;chromatin remodeling;0.0415191799547835!GO:0031901;early endosome membrane;0.0416183014636493!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0416183014636493!GO:0010257;NADH dehydrogenase complex assembly;0.0416183014636493!GO:0033108;mitochondrial respiratory chain complex assembly;0.0416183014636493!GO:0045926;negative regulation of growth;0.0417626796305944!GO:0003678;DNA helicase activity;0.0419567863937938!GO:0008092;cytoskeletal protein binding;0.0420606571900181!GO:0006783;heme biosynthetic process;0.0425291986354308!GO:0030100;regulation of endocytosis;0.0427359352197981!GO:0016407;acetyltransferase activity;0.0428932471776398!GO:0045185;maintenance of protein localization;0.0433152211895633!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0436644521563987!GO:0000428;DNA-directed RNA polymerase complex;0.0436644521563987!GO:0019798;procollagen-proline dioxygenase activity;0.0445889167625797!GO:0016251;general RNA polymerase II transcription factor activity;0.0454521260486779!GO:0004518;nuclease activity;0.0460999283151139!GO:0005975;carbohydrate metabolic process;0.0463788314178689!GO:0030149;sphingolipid catabolic process;0.0464929483063532!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0464929483063532!GO:0000776;kinetochore;0.0468305642713146!GO:0008637;apoptotic mitochondrial changes;0.0472113440390288!GO:0004300;enoyl-CoA hydratase activity;0.047696955294554!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0477793964695534!GO:0006767;water-soluble vitamin metabolic process;0.0478098764630483!GO:0006405;RNA export from nucleus;0.048231888847207!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0485882059692312!GO:0042158;lipoprotein biosynthetic process;0.0486170961950261!GO:0006497;protein amino acid lipidation;0.0496999817057435!GO:0030433;ER-associated protein catabolic process;0.0496999817057435!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0496999817057435
|sample_id=11605
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=heart
|top_motifs=RXR{A,B,G}:2.23493134038;IKZF1:1.78430268538;GLI1..3:1.546699879;RXRA_VDR{dimer}:1.44698037016;NR1H4:1.36844524021;NR6A1:1.32922538232;HOX{A5,B5}:1.29585919961;TFAP4:1.12565044916;ZNF238:1.0483507953;EN1,2:1.04234675105;SMAD1..7,9:1.02637338162;NKX2-1,4:0.995234650863;AR:0.986181507388;UFEwm:0.973222684154;CRX:0.955894571712;EBF1:0.861792831391;CDC5L:0.851733036196;FOXP3:0.81820245924;TLX1..3_NFIC{dimer}:0.815445070353;GTF2A1,2:0.813917818847;MYBL2:0.807637186923;NKX2-2,8:0.766233273467;EVI1:0.754432004036;STAT5{A,B}:0.751840863959;TEF:0.73703563523;XBP1:0.723471604062;LHX3,4:0.702493460893;NANOG{mouse}:0.697481218055;NKX3-1:0.691864403864;PAX5:0.655859855701;SOX17:0.607084989418;SRF:0.601199251603;ZIC1..3:0.583298312945;TFCP2:0.5720629131;ALX4:0.554843320664;KLF4:0.549442833866;GZF1:0.547175856982;STAT2,4,6:0.543859560819;HSF1,2:0.542436842939;GFI1B:0.537750860166;NFATC1..3:0.527817800367;NR3C1:0.511225294162;ESR1:0.486432374052;PBX1:0.479643948527;TEAD1:0.463782263796;DBP:0.45015395973;PATZ1:0.449831488376;NR5A1,2:0.440266739956;ESRRA:0.438311109028;GFI1:0.435033943917;GATA6:0.431884911527;GTF2I:0.424618548612;ONECUT1,2:0.415547984111;ATF6:0.401183720092;TBP:0.389410668228;PAX8:0.373221871668;FOXD3:0.36668128164;HOX{A4,D4}:0.354391215476;T:0.315312390524;TAL1_TCF{3,4,12}:0.310235133746;NFE2L2:0.301665046208;FOXO1,3,4:0.30044617254;SOX2:0.300245977954;ZNF423:0.292219016057;STAT1,3:0.245250501161;HNF4A_NR2F1,2:0.23893557884;SPZ1:0.23869434954;XCPE1{core}:0.237223285666;ZNF148:0.221072161065;VSX1,2:0.21432027547;SOX5:0.195238810769;MAZ:0.186522380675;PAX1,9:0.168567237161;ZNF384:0.160971947893;NKX6-1,2:0.152172567319;ZBTB6:0.125689029806;SOX{8,9,10}:0.0951876782167;LEF1_TCF7_TCF7L1,2:0.0925985098532;TOPORS:0.0807262596398;TP53:0.077922413605;CEBPA,B_DDIT3:0.0664215043111;RFX1:0.0486146873881;HAND1,2:0.0429365361361;HNF1A:0.0393360518777;FOX{F1,F2,J1}:0.0379282260488;RBPJ:0.0377853402725;REST:0.0376897211125;CDX1,2,4:-0.0080621461319;GATA4:-0.0143314839131;NFE2:-0.0200380479424;HIC1:-0.0259020273169;MAFB:-0.0281802184261;ARID5B:-0.0398558922284;POU2F1..3:-0.0405263248855;NFIX:-0.0450562519949;MYFfamily:-0.0672760474916;NHLH1,2:-0.067828086099;AIRE:-0.0725948488768;HOXA9_MEIS1:-0.0764922838191;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0769577848966;HES1:-0.0899458534545;MZF1:-0.0991995573888;HBP1_HMGB_SSRP1_UBTF:-0.107750715205;E2F1..5:-0.12370907083;HLF:-0.125157518846;FOXA2:-0.125299775218;TLX2:-0.125613534324;FOXM1:-0.13696748048;PRRX1,2:-0.142537813872;EGR1..3:-0.143647378077;HMGA1,2:-0.162186656797;ZNF143:-0.162627164565;NFE2L1:-0.168822528407;NFY{A,B,C}:-0.170703362352;PRDM1:-0.176941032864;SP1:-0.18373885534;MEF2{A,B,C,D}:-0.184561260375;DMAP1_NCOR{1,2}_SMARC:-0.188377784155;ETS1,2:-0.191180992152;NFKB1_REL_RELA:-0.193326395853;BACH2:-0.195106304226;TFAP2{A,C}:-0.202474782264;NANOG:-0.208649149794;SPIB:-0.221364902214;NKX3-2:-0.224192540949;PAX3,7:-0.224463300627;ZBTB16:-0.225619809705;FOXQ1:-0.225970572183;YY1:-0.227605793477;AHR_ARNT_ARNT2:-0.246998772247;IRF7:-0.248873424517;TFDP1:-0.257258525129;FOS_FOS{B,L1}_JUN{B,D}:-0.266203200528;IRF1,2:-0.278123072761;PPARG:-0.278310646576;POU5F1:-0.279282269017;bHLH_family:-0.28128240167;EP300:-0.288202930491;POU3F1..4:-0.299762718069;ALX1:-0.303057795192;RREB1:-0.31014743959;RUNX1..3:-0.311729063101;ELK1,4_GABP{A,B1}:-0.316239416148;FOX{I1,J2}:-0.331639132265;FOSL2:-0.343173587809;SPI1:-0.35489296889;MTE{core}:-0.357868970906;MED-1{core}:-0.359895372758;ZFP161:-0.37550060836;FOX{D1,D2}:-0.383589222806;POU6F1:-0.418035999519;ELF1,2,4:-0.421774745877;HIF1A:-0.44226701421;JUN:-0.447254925423;MTF1:-0.457293229197;HMX1:-0.464142667604;BPTF:-0.475633226058;PAX6:-0.505364173553;PAX2:-0.533588474154;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.543477210043;TBX4,5:-0.549894244743;POU1F1:-0.577742688991;NFIL3:-0.583678227305;ATF4:-0.589396133952;TFAP2B:-0.591362556521;IKZF2:-0.597671205102;FOXL1:-0.61091274257;CUX2:-0.622693779831;RORA:-0.623111467775;ATF5_CREB3:-0.629692855571;NKX2-3_NKX2-5:-0.644870336055;NRF1:-0.648355543864;GCM1,2:-0.667330925474;MYB:-0.667593403051;BREu{core}:-0.66788831609;TGIF1:-0.738490909864;SREBF1,2:-0.756306352374;FOXP1:-0.759940504655;PAX4:-0.764316619552;OCT4_SOX2{dimer}:-0.766183665847;ZEB1:-0.798865667946;RFX2..5_RFXANK_RFXAP:-0.821984811836;SNAI1..3:-0.847988063031;CREB1:-0.864106493799;LMO2:-0.888083286487;ADNP_IRX_SIX_ZHX:-0.925754271195;ATF2:-1.00576950853;FOXN1:-1.08285956845;MYOD1:-1.1569258687;PITX1..3:-1.21762779031;PDX1:-1.30409188932;HOX{A6,A7,B6,B7}:-2.24404779627
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11605-120I3;search_select_hide=table117:FF:11605-120I3
}}
}}

Latest revision as of 18:11, 4 June 2020

Name:Cardiac Myocyte, donor2
Species:Human (Homo sapiens)
Library ID:CNhs12350
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueheart
dev stageNA
sexNA
ageNA
cell typecardiac muscle cell
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberSC6205
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004909
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12350 CAGE DRX008199 DRR009071
Accession ID Hg19

Library idBAMCTSS
CNhs12350 DRZ000496 DRZ001881
Accession ID Hg38

Library idBAMCTSS
CNhs12350 DRZ011846 DRZ013231
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0934
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.0363
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.223
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0584
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.219
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.141
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.223
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0818
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.00758
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.286
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0385
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.00628
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0699
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.523
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.524
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.223
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.479
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.89
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12350

Jaspar motifP-value
MA0002.20.304
MA0003.10.288
MA0004.10.324
MA0006.10.057
MA0007.10.0965
MA0009.10.568
MA0014.10.828
MA0017.10.224
MA0018.21.46322e-5
MA0019.10.495
MA0024.10.0445
MA0025.16.5233e-4
MA0027.10.508
MA0028.10.366
MA0029.10.53
MA0030.10.767
MA0031.10.818
MA0035.25.39776e-4
MA0038.10.809
MA0039.20.512
MA0040.10.446
MA0041.10.255
MA0042.10.629
MA0043.14.95109e-4
MA0046.10.37
MA0047.20.96
MA0048.10.712
MA0050.10.252
MA0051.10.3
MA0052.10.0351
MA0055.10.535
MA0057.10.429
MA0058.10.063
MA0059.10.768
MA0060.10.286
MA0061.10.698
MA0062.21.72894e-4
MA0065.20.062
MA0066.10.0296
MA0067.10.0369
MA0068.10.292
MA0069.10.713
MA0070.10.422
MA0071.10.349
MA0072.10.785
MA0073.10.917
MA0074.10.181
MA0076.10.0331
MA0077.10.68
MA0078.10.116
MA0079.20.223
MA0080.21.38207e-5
MA0081.10.0333
MA0083.10.00338
MA0084.10.144
MA0087.10.155
MA0088.10.565
MA0090.10.0119
MA0091.10.142
MA0092.10.291
MA0093.10.258
MA0099.20.0733
MA0100.10.216
MA0101.10.51
MA0102.20.787
MA0103.10.00422
MA0104.20.331
MA0105.10.0641
MA0106.10.389
MA0107.10.329
MA0108.20.00278
MA0111.10.985
MA0112.20.00251
MA0113.10.0235
MA0114.10.383
MA0115.10.582
MA0116.10.0268
MA0117.10.521
MA0119.10.237
MA0122.10.8
MA0124.10.885
MA0125.10.811
MA0131.10.0568
MA0135.10.139
MA0136.11.31225e-7
MA0137.20.00717
MA0138.20.419
MA0139.10.547
MA0140.10.014
MA0141.10.0312
MA0142.10.775
MA0143.10.655
MA0144.10.015
MA0145.10.241
MA0146.10.276
MA0147.10.377
MA0148.10.682
MA0149.10.555
MA0150.10.151
MA0152.10.0223
MA0153.10.918
MA0154.10.0506
MA0155.10.137
MA0156.14.04058e-4
MA0157.10.971
MA0159.10.00684
MA0160.10.407
MA0162.10.194
MA0163.10.00505
MA0164.10.279
MA0258.10.0709
MA0259.10.292



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12350

Novel motifP-value
10.4
100.862
1000.748
1010.604
1020.175
1030.162
1040.264
1050.811
1060.0359
1070.00472
1080.316
1090.778
110.127
1100.1
1110.0841
1120.446
1130.0873
1140.603
1150.312
1160.0526
1170.334
1180.794
1190.941
120.297
1200.0828
1210.182
1220.369
1230.00414
1240.375
1250.83
1260.443
1270.14
1280.00932
1290.919
130.799
1300.118
1310.795
1320.317
1330.383
1340.381
1350.434
1360.49
1370.481
1380.748
1390.538
140.678
1400.879
1410.39
1420.309
1430.364
1440.124
1450.283
1460.105
1470.242
1480.496
1490.0752
150.494
1500.217
1510.485
1520.185
1530.846
1540.389
1550.0343
1560.58
1570.699
1580.00543
1590.152
160.0782
1600.0626
1610.881
1620.311
1630.844
1640.375
1650.996
1660.105
1670.197
1680.644
1690.0582
170.845
180.281
190.0474
20.212
200.331
210.393
220.18
230.166
240.531
250.617
260.111
270.407
280.359
290.254
30.276
300.326
310.864
321.28563e-10
330.33
340.116
350.499
360.872
370.2
380.76
390.0352
40.163
400.893
410.605
420.702
430.166
440.0451
450.392
460.137
470.649
480.377
490.38
50.342
500.336
510.486
520.433
530.382
540.915
550.843
560.875
570.682
580.992
590.0415
60.855
600.766
610.591
620.364
630.379
640.444
650.167
660.739
670.905
680.93
690.298
70.898
700.491
710.0649
720.6
730.12
740.257
750.501
760.561
770.127
780.911
790.117
80.0369
800.718
810.671
820.295
830.43
840.72
850.00899
860.758
870.0259
880.536
890.144
90.224
900.976
910.457
920.477
930.306
940.59
950.413
960.744
970.822
980.362
990.00408



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12350


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000737 (striated muscle cell)
0000746 (cardiac muscle cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000118 (human cardiac myocyte sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000513 (cardiac muscle myoblast)

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