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(Created page with "{{f5samples |id=FF:11755-123G9 |name=mesenchymal precursor cell - cardiac, donor4 |sample_id=11755 |rna_tube_id=123G9 |rna_box=123 |rna_position=G9 |sample_cell_lot=HH-...")
 
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{{f5samples
{{f5samples
|id=FF:11755-123G9
|DRA_sample_Accession=CAGE@SAMD00005356
|name=mesenchymal precursor cell - cardiac, donor4
|accession_numbers=CAGE;DRX008554;DRR009426;DRZ000851;DRZ002236;DRZ012201;DRZ013586
|sample_id=11755
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0002384,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009
|rna_tube_id=123G9
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0002494,CL:0000034,CL:0000569
|rna_box=123
|rna_position=G9
|sample_cell_lot=HH-421-AD
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=heart
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=2.11000
|rna_od260/280=2.06000
|sample_cell_type=mesenchymal precursor cell
|sample_cell_line=
|sample_collaboration=Claudio Schneider LNCIB
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=40.28625
|rna_concentration=0.53715
|sample_note=
|profile_hcage=CNhs12371,LSID914,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000011,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000133,CL:0000134,CL:0000144,CL:0000219,CL:0000220,CL:0000221,CL:0000255,CL:0000333,CL:0000548,CL:0000569,CL:0000723,CL:0002320,CL:0002321,CL:0002371,CL:0002494
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000061,UBERON:0000062,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000948,UBERON:0001009,UBERON:0001048,UBERON:0001062,UBERON:0002050,UBERON:0002384,UBERON:0002532,UBERON:0003081,UBERON:0003084,UBERON:0003914,UBERON:0004120,UBERON:0004140,UBERON:0004141,UBERON:0004291,UBERON:0004535,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0005498,UBERON:0007005,UBERON:0007100
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000271
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.83!66.98!TCF21;;chr8:55370487..55370503,+!p1@SOX17!1.82!65.06!SOX17;;chr1:170632285..170632309,+!p1@PRRX1!1.35!24.10!PRRX1;;chr3:141105705..141105770,+!p4@ZBTB38!1.32!24.10!ZBTB38;;chr8:11561684..11561751,+!p1@GATA4!1.29!18.63!GATA4;;chr20:6748325..6748352,+!p1@BMP2!1.27!25.43!BMP2;;chr1:170633348..170633399,+!p2@PRRX1!1.23!21.59!PRRX1;;chr1:170633262..170633285,+!p3@PRRX1!1.23!18.48!PRRX1;;chr7:35293685..35293718,-!p1@TBX20!1.21!15.23!TBX20;;chr8:72756637..72756664,-!p3@MSC!1.19!16.41!MSC;;chr21:36260773..36260804,-!p7@RUNX1!1.18!18.93!RUNX1;;chr3:141087393..141087426,+!p3@ZBTB38!1.13!50.12!ZBTB38;;chr10:131762504..131762555,-!p1@EBF3!1.07!10.79!EBF3;;chr3:141087454..141087465,+!p19@ZBTB38!1.06!10.50!ZBTB38;;chr21:38071430..38071456,+!p1@SIM2!1.05!10.20!SIM2;;chrY:21906594..21906622,-!p1@KDM5D!1.05!10.20!KDM5D;;chr8:72756667..72756736,-!p2@MSC!0.99!13.75!MSC;;chrY:2803415..2803468,+!p1@ZFY!0.99!8.72!ZFY;;chr12:66218598..66218645,+!p2@HMGA2!0.98!40.51!HMGA2;;chr12:66218255..66218304,+!p3@HMGA2!0.98!23.21!HMGA2;;chr14:29234581..29234601,+!p2@FOXG1!0.98!8.58!FOXG1;;chr2:102091144..102091183,-!p2@RFX8!0.98!8.58!RFX8;;chr8:72756267..72756296,-!p4@MSC!0.96!12.12!MSC;;chr11:125034640..125034655,+!p1@PKNOX2!0.92!7.39!PKNOX2;;chr4:174450089..174450153,-!p2@HAND2!0.91!7.10!HAND2;;chr12:52445218..52445237,+!p1@NR4A1!0.88!87.68!NR4A1;;chr2:239756671..239756732,+!p1@TWIST2!0.88!22.18!TWIST2;;chr18:19749541..19749557,+!p1@GATA6!0.88!21.88!GATA6;;chr1:170632959..170632987,+!p4@PRRX1!0.88!7.24!PRRX1;;chr19:42636586..42636607,-!p1@POU2F2!0.87!18.78!POU2F2;;chr11:46299199..46299233,+!p1@CREB3L1!0.86!34.15!CREB3L1;;chr20:50179368..50179392,-!p2@NFATC2!0.86!8.28!NFATC2;;chr14:29236269..29236285,+!p3@FOXG1!0.86!6.21!FOXG1;;chr9:16705069..16705086,-!p3@BNC2!0.86!6.21!BNC2;;chr8:72756063..72756125,-!p1@MSC!0.85!12.86!MSC;;chr2:102091566..102091581,-!p1@RFX8!0.85!6.06!RFX8;;chr1:170632723..170632739,+!p8@PRRX1!0.85!6.06!PRRX1;;chr3:157823517..157823562,-!p1@SHOX2!0.84!6.36!SHOX2;;chr14:29235961..29236008,+!p1@FOXG1!0.84!5.91!FOXG1;;chr1:151032860..151032918,+!p1@MLLT11!0.81!70.08!MLLT11;;chr2:239756739..239756755,+!p2@TWIST2!0.79!9.31!TWIST2;;chr11:65686732..65686756,+!p2@DRAP1!0.77!22.33!DRAP1;;chr12:66218836..66218888,+!p1@HMGA2!0.76!48.64!HMGA2;;chr6:85473156..85473210,-!p2@TBX18!0.76!5.91!TBX18;;chr1:170632137..170632172,+!p10@PRRX1!0.76!4.73!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.76!4.73!PRRX1;;chr10:64576105..64576133,-!p1@EGR2!0.75!10.20!EGR2;;chr11:46299539..46299620,+!p2@CREB3L1!0.75!8.28!CREB3L1;;chr1:170632250..170632277,+!p7@PRRX1!0.75!4.58!PRRX1;;chr10:35484053..35484076,+!p1@CREM!0.74!12.27!CREM;;chr15:83953397..83953425,-!p1@BNC1!0.74!5.32!BNC1;;chr19:45971246..45971265,+!p1@FOSB!0.72!89.30!FOSB;;chr11:65687362..65687436,+!p3@DRAP1!0.72!21.44!DRAP1;;chr7:28448965..28448994,+!p2@CREB5!0.72!16.56!CREB5;;chr18:53068911..53068935,-!p4@TCF4!0.72!4.88!TCF4;;chr1:170632647..170632659,+!p17@PRRX1!0.72!4.29!PRRX1;;chr11:34642612..34642646,+!p1@EHF!0.71!4.14!EHF;;chr7:44143925..44143970,+!p1@AEBP1!0.70!102.61!AEBP1;;chr1:37940170..37940190,+!p1@ZC3H12A!0.70!55.74!ZC3H12A;;chr1:221052776..221052799,+!p1@HLX!0.70!7.84!HLX;;chr11:125034605..125034636,+!p2@PKNOX2!0.70!3.99!PKNOX2;;chr6:106534192..106534224,+!p1@PRDM1!0.69!12.12!PRDM1;;chr8:77593750..77593757,+!p3@ZFHX4!0.69!3.84!ZFHX4;;chr19:46801639..46801699,+!p1@HIF3A!0.69!3.84!HIF3A;;chr1:170632115..170632136,+!p9@PRRX1!0.69!3.84!PRRX1;;chr7:19157043..19157088,-!p2@TWIST1!0.68!10.65!TWIST1;;chr19:31840130..31840160,-!p2@TSHZ3!0.68!6.21!TSHZ3;;chr18:19749386..19749404,+!p2@GATA6!0.68!5.77!GATA6;;chr2:66662281..66662308,+!p1@MEIS1!0.67!14.34!MEIS1;;chr2:19558373..19558392,-!p1@OSR1!0.67!11.24!OSR1;;chr8:72755987..72756002,-!p7@MSC!0.67!3.70!MSC;;chr11:65686802..65686818,+!p6@DRAP1!0.66!6.65!DRAP1;;chr1:170632477..170632506,+!p6@PRRX1!0.66!3.55!PRRX1;;chr12:66218183..66218209,+!p4@HMGA2!0.65!7.24!HMGA2;;chr12:66218212..66218244,+!p5@HMGA2!0.65!5.32!HMGA2;;chr15:42749722..42749739,-!p2@ZFP106!0.64!6.51!ZFP106;;chr1:158985493..158985535,+!p4@IFI16!0.64!5.47!IFI16;;chr1:221052840..221052875,+!p4@HLX!0.64!4.14!HLX;;chr14:62162258..62162269,+!p2@HIF1A!0.63!36.82!HIF1A;;chr1:59249688..59249703,-!p3@JUN!0.63!22.77!JUN;;chr8:72756213..72756243,-!p5@MSC!0.63!4.44!MSC;;chr7:28449015..28449024,+!p6@CREB5!0.63!3.25!CREB5;;chr8:25902876..25902936,-!p1@EBF2!0.63!3.25!EBF2;;chr13:45010939..45011033,-!p1@TSC22D1!0.62!248.10!TSC22D1;;chr3:114343768..114343822,-!p1@ZBTB20!0.62!16.26!ZBTB20;;chr2:66662895..66662907,+!p3@MEIS1!0.62!4.14!MEIS1;;chr1:158979792..158979814,+!p2@IFI16!0.61!35.19!IFI16;;chr1:158979872..158979898,+!p3@IFI16!0.61!10.94!IFI16;;chr17:46621937..46621966,-!p2@HOXB2!0.61!9.46!HOXB2;;chr17:46622070..46622109,-!p1@HOXB2!0.61!7.69!HOXB2;;chr2:66662396..66662407,+!p4@MEIS1!0.61!3.10!MEIS1;;chr8:106330656..106330684,+!p1@ZFPM2!0.60!9.02!ZFPM2;;chr1:151032782..151032801,+!p4@MLLT11!0.60!6.65!MLLT11;;chr21:36260343..36260402,-!p6@RUNX1!0.60!5.17!RUNX1;;chr17:46622205..46622218,-!p3@HOXB2!0.60!3.55!HOXB2;;chr1:170632051..170632081,+!p16@PRRX1!0.60!2.96!PRRX1;;chr8:49833948..49833973,-!p2@SNAI2!0.59!22.03!SNAI2;;chr17:1959369..1959388,+!p2@HIC1!0.59!8.87!HIC1;;chr14:24837368..24837401,+!p1@NFATC4!0.59!7.84!NFATC4;;chr12:80085255..80085284,-!p9@PAWR!0.59!4.58!PAWR;;chr6:144329384..144329405,-!p1@PLAGL1!0.58!39.63!PLAGL1;;chr14:62162285..62162296,+!p3@HIF1A!0.58!17.59!HIF1A;;chr7:19157248..19157268,-!p1@TWIST1!0.58!9.02!TWIST1;;chr7:1577899..1577943,+!p3@MAFK!0.58!2.81!MAFK;;chr8:72756380..72756427,-!p8@MSC!0.58!2.81!MSC;;chr4:174451370..174451387,-!p1@HAND2!0.58!2.81!HAND2;;chr7:14029283..14029311,-!p1@ETV1!0.57!17.74!ETV1;;chr18:19749517..19749531,+!p3@GATA6!0.57!5.47!GATA6;;chr10:64134120..64134183,+!p1@ZNF365!0.57!3.40!ZNF365;;chr21:36260295..36260310,-!p3@RUNX1!0.56!4.73!RUNX1;;chr1:170632028..170632043,+!p20@PRRX1!0.56!2.66!PRRX1;;chr10:45495946..45495976,+!p2@ZNF22!0.56!2.66!ZNF22;;chr12:66218904..66218913,+!p11@HMGA2!0.56!2.66!HMGA2;;chr16:31076332..31076388,-!p3@ZNF668!0.56!2.66!ZNF668;;chr2:101436564..101436647,+!p1@NPAS2!0.55!65.06!NPAS2;;chr9:14314566..14314618,-!p1@NFIB!0.55!38.15!NFIB;;chr3:141087339..141087387,+!p2@ZBTB38!0.55!32.82!ZBTB38;;chr5:137804484..137804498,+!p2@EGR1!0.55!12.57!EGR1;;chr10:94449703..94449718,+!p1@HHEX!0.55!11.98!HHEX;;chr10:35484804..35484902,+!p2@CREM!0.55!11.83!CREM;;chr19:31840313..31840380,-!p1@TSHZ3!0.55!7.69!TSHZ3;;chr7:28448995..28449011,+!p4@CREB5!0.55!3.84!CREB5;;chr5:174151612..174151633,+!p2@MSX2!0.55!2.51!MSX2;;chr2:102091478..102091490,-!p3@RFX8!0.55!2.51!RFX8;;chr3:193853927..193853944,+!p1@HES1!0.54!101.72!HES1;;chr11:65687158..65687216,+!p4@DRAP1!0.54!17.59!DRAP1;;chr17:59477233..59477263,+!p1@TBX2!0.54!9.17!TBX2;;chr3:168864315..168864339,-!p2@MECOM!0.54!4.58!MECOM;;chr3:101568349..101568365,+!p1@NFKBIZ!0.53!160.42!NFKBIZ;;chr7:44143978..44143989,+!p2@AEBP1!0.53!5.03!AEBP1;;chr2:192015701..192015743,-!p1@STAT4!0.53!3.55!STAT4;;chr11:125034586..125034604,+!p3@PKNOX2!0.53!2.37!PKNOX2;;chr17:41277372..41277418,-!p1@BRCA1!0.52!10.35!BRCA1;;chr1:151032833..151032850,+!p3@MLLT11!0.52!6.21!MLLT11;;chr1:158979851..158979865,+!p5@IFI16!0.52!6.06!IFI16;;chr12:26277817..26277863,-!p2@BHLHE41!0.52!3.40!BHLHE41;;chr17:46622229..46622257,-!p6@HOXB2!0.52!2.81!HOXB2;;chr17:46655730..46655791,-!p1@HOXB4!0.51!6.65!HOXB4;;chr12:66218573..66218596,+!p7@HMGA2!0.51!3.70!HMGA2;;chr3:168865194..168865245,-!p3@MECOM!0.51!3.10!MECOM;;chr3:141087562..141087594,+!p12@ZBTB38!0.51!2.22!ZBTB38;;chr3:193854202..193854232,+!p2@HES1!0.51!2.22!HES1;;chr5:142780237..142780261,-!p7@NR3C1!0.51!2.22!NR3C1;;chr16:86600426..86600441,+!p1@FOXC2!0.50!6.51!FOXC2;;chr17:46622440..46622477,-!p5@HOXB2!0.50!2.51!HOXB2;;chr9:4300050..4300118,-!p1@GLIS3!0.49!17.74!GLIS3;;chr9:14082760..14082775,-!p6@NFIB!0.49!3.99!NFIB;;chr3:141121847..141121868,+!p5@ZBTB38!0.49!3.55!ZBTB38;;chr2:66662510..66662521,+!p6@MEIS1!0.49!2.07!MEIS1;;chr7:28449026..28449037,+!p8@CREB5!0.49!2.07!CREB5;;chr1:170632439..170632465,+!p11@PRRX1!0.49!2.07!PRRX1;;chr2:66662249..66662267,+!p2@MEIS1!0.48!10.05!MEIS1;;chr14:62203595..62203676,+!p4@HIF1A!0.48!4.44!HIF1A;;chr7:137686763..137686784,-!p5@CREB3L2!0.48!4.14!CREB3L2;;chr1:151032922..151032951,+!p2@MLLT11!0.48!3.84!MLLT11;;chr12:66218378..66218401,+!p6@HMGA2!0.48!3.55!HMGA2;;chr17:59477275..59477286,+!p3@TBX2!0.48!2.96!TBX2;;chr10:63809106..63809127,+!p1@ARID5B!0.47!36.08!ARID5B;;chr15:57511609..57511651,+!p2@TCF12!0.47!3.84!TCF12;;chr17:41739283..41739297,-!p1@MEOX1!0.47!1.92!MEOX1;;chr1:170633245..170633256,+!p14@PRRX1!0.47!1.92!PRRX1;;chr21:38071403..38071428,+!p2@SIM2!0.47!1.92!SIM2;;chr5:142780189..142780223,-!p6@NR3C1!0.47!1.92!NR3C1;;chr8:72756251..72756262,-!p12@MSC!0.47!1.92!MSC;;chrY:21906761..21906810,-!p2@KDM5D!0.47!1.92!KDM5D;;chr12:27485762..27485776,+!p3@ARNTL2!0.46!6.36!ARNTL2;;chr6:106534230..106534254,+!p2@PRDM1!0.46!5.91!PRDM1;;chr1:200379104..200379128,-!p2@ZNF281!0.46!5.77!ZNF281;;chr8:106330696..106330719,+!p2@ZFPM2!0.46!2.66!ZFPM2;;chr11:65687222..65687240,+!p7@DRAP1!0.46!2.66!DRAP1;;chr22:38598086..38598105,+!p1@MAFF!0.45!26.76!MAFF;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.45!11.09!TAL1;;chr4:146402843..146402864,+!p3@SMAD1!0.45!4.44!SMAD1;;chr9:16870710..16870763,-!p1@BNC2!0.45!3.70!BNC2;;chr19:31840438..31840470,-!p3@TSHZ3!0.45!2.51!TSHZ3;;chr8:77593474..77593612,+!p1@ZFHX4!0.44!10.05!ZFHX4;;chr5:321810..321877,+!p1@AHRR!0.44!7.39!AHRR;;chr9:14083467..14083483,-!p4@NFIB!0.44!5.47!NFIB;;chr9:14314522..14314556,-!p3@NFIB!0.44!5.17!NFIB;;chr11:6947720..6947812,+!p1@ZNF215!0.44!2.51!ZNF215;;chr12:66218443..66218461,+!p8@HMGA2!0.44!2.51!HMGA2;;chr12:72056773..72056796,+!p3@THAP2!0.44!2.51!THAP2;;chr1:158985469..158985489,+!p7@IFI16!0.44!2.22!IFI16;;chr1:221052994..221053008,+!p6@HLX!0.44!2.22!HLX;;chr5:137804130..137804156,+!p5@EGR1!0.44!1.92!EGR1;;chr19:54058073..54058088,+!p1@ZNF331!0.44!1.77!ZNF331;;chr1:119530493..119530572,-!p1@TBX15!0.44!1.77!TBX15;;chr1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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000034;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000569;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002494;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000948
|ffid_belonging_in_development=CL:0000133,CL:0000134,CL:0000011,CL:0000221
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor4.CNhs12371.11755-123G9.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor4.CNhs12371.11755-123G9.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor4.CNhs12371.11755-123G9.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor4.CNhs12371.11755-123G9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor4.CNhs12371.11755-123G9.hg38.nobarcode.ctss.bed.gz
|id=FF:11755-123G9
|is_a=EFO:0002091;;FF:0000271
|is_obsolete=
|library_id=CNhs12371
|library_id_phase_based=2:CNhs12371
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11755
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11755
|name=mesenchymal precursor cell - cardiac, donor4
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs12371,LSID914,release011,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
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|rna_box=123
|rna_catalog_number=
|rna_concentration=0.53715
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=2.11
|rna_od260/280=2.06
|rna_position=G9
|rna_rin=
|rna_sample_type=
|rna_tube_id=123G9
|rna_weight_ug=40.28625
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=HH-421-AD
|sample_cell_type=mesenchymal precursor cell
|sample_collaboration=Claudio Schneider LNCIB
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.50809543104032e-230!GO:0005737;cytoplasm;1.02994541893457e-194!GO:0043226;organelle;4.68834211921062e-181!GO:0043229;intracellular organelle;1.49754827789428e-180!GO:0043231;intracellular membrane-bound organelle;6.4428376685662e-180!GO:0043227;membrane-bound organelle;1.25009388402093e-179!GO:0044422;organelle part;3.40758221432262e-143!GO:0044444;cytoplasmic part;3.43916640628358e-143!GO:0044446;intracellular organelle part;1.29341635833492e-141!GO:0032991;macromolecular complex;8.04495661744138e-95!GO:0030529;ribonucleoprotein complex;4.74760575282518e-85!GO:0044238;primary metabolic process;6.72763708091635e-82!GO:0044237;cellular metabolic process;2.41545340770337e-81!GO:0005515;protein binding;4.14313201361413e-81!GO:0043170;macromolecule metabolic process;4.47568618524212e-76!GO:0044428;nuclear part;3.88192346847425e-67!GO:0043233;organelle lumen;4.00808532651309e-67!GO:0031974;membrane-enclosed lumen;4.00808532651309e-67!GO:0003723;RNA binding;2.28366235487361e-65!GO:0005634;nucleus;4.31637963117689e-63!GO:0005739;mitochondrion;4.53586172928387e-60!GO:0031090;organelle membrane;1.01578627854281e-53!GO:0019538;protein metabolic process;6.69825527055887e-52!GO:0005840;ribosome;9.08619117177347e-52!GO:0006412;translation;4.18010417531827e-49!GO:0016043;cellular component organization and biogenesis;1.95057627960669e-48!GO:0043234;protein complex;5.15393324687533e-47!GO:0044260;cellular macromolecule metabolic process;3.77108856388143e-46!GO:0003735;structural constituent of ribosome;4.3087707706105e-46!GO:0044267;cellular protein metabolic process;9.12562932903453e-46!GO:0006396;RNA processing;4.55846214682984e-45!GO:0015031;protein transport;5.87847664087972e-45!GO:0033036;macromolecule localization;3.00766936165982e-44!GO:0005829;cytosol;1.09819970440431e-42!GO:0009058;biosynthetic process;3.3434280700304e-42!GO:0045184;establishment of protein localization;4.60616449039799e-42!GO:0008104;protein localization;2.27417208928323e-41!GO:0044429;mitochondrial part;8.52279951466786e-41!GO:0033279;ribosomal subunit;4.79100406167296e-40!GO:0009059;macromolecule biosynthetic process;1.01091072129608e-39!GO:0043283;biopolymer metabolic process;1.6637590347481e-39!GO:0031981;nuclear lumen;1.70674690436476e-39!GO:0031967;organelle envelope;1.70514773112866e-38!GO:0031975;envelope;2.95019425812247e-38!GO:0044249;cellular biosynthetic process;1.17534043655341e-37!GO:0016071;mRNA metabolic process;2.45483086406844e-35!GO:0046907;intracellular transport;9.33276967067983e-35!GO:0008380;RNA splicing;1.79677131840126e-34!GO:0043228;non-membrane-bound organelle;1.00491202213578e-32!GO:0043232;intracellular non-membrane-bound organelle;1.00491202213578e-32!GO:0010467;gene expression;3.51154494124126e-32!GO:0006397;mRNA processing;1.76757879005231e-31!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.96849080531475e-31!GO:0006996;organelle organization and biogenesis;7.46777866710547e-31!GO:0065003;macromolecular complex assembly;3.28810214627961e-30!GO:0006886;intracellular protein transport;4.71708466186888e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.06819188221478e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.7213095896681e-29!GO:0005740;mitochondrial envelope;1.84339615483598e-27!GO:0006259;DNA metabolic process;3.43626359257328e-27!GO:0005783;endoplasmic reticulum;4.07802656201934e-27!GO:0022607;cellular component assembly;2.65527656814039e-26!GO:0031966;mitochondrial membrane;1.20867872772768e-25!GO:0019866;organelle inner membrane;1.26434736210302e-24!GO:0007049;cell cycle;1.48032667041229e-24!GO:0005681;spliceosome;3.18017933107523e-24!GO:0012505;endomembrane system;8.91028993694972e-24!GO:0005654;nucleoplasm;1.00278964673269e-23!GO:0044445;cytosolic part;2.73940848734628e-23!GO:0006119;oxidative phosphorylation;3.61229692659776e-23!GO:0005743;mitochondrial inner membrane;6.10018465089226e-23!GO:0016462;pyrophosphatase activity;8.48136886943725e-23!GO:0051649;establishment of cellular localization;1.02212931652251e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.11162954771829e-22!GO:0051641;cellular localization;1.21639167578617e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;1.93211262701782e-22!GO:0017111;nucleoside-triphosphatase activity;2.43079573514602e-22!GO:0006457;protein folding;2.44325724986795e-22!GO:0000166;nucleotide binding;1.09968342493247e-21!GO:0015935;small ribosomal subunit;1.49123317211975e-20!GO:0015934;large ribosomal subunit;1.84752417598644e-20!GO:0044432;endoplasmic reticulum part;2.08779740246449e-20!GO:0044455;mitochondrial membrane part;2.27163929778768e-19!GO:0022402;cell cycle process;4.16840196830521e-19!GO:0044451;nucleoplasm part;5.26607916578091e-19!GO:0005794;Golgi apparatus;7.81527361025838e-19!GO:0048770;pigment granule;1.27798860255984e-18!GO:0042470;melanosome;1.27798860255984e-18!GO:0022618;protein-RNA complex assembly;4.87441966465193e-18!GO:0000278;mitotic cell cycle;7.95111933395395e-18!GO:0000502;proteasome complex (sensu Eukaryota);3.33292895444903e-17!GO:0005746;mitochondrial respiratory chain;4.66873966416022e-17!GO:0003676;nucleic acid binding;1.07793691437102e-16!GO:0043285;biopolymer catabolic process;1.90165202515789e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.36290343191354e-16!GO:0005730;nucleolus;2.62589908390632e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;4.05864869994964e-16!GO:0031980;mitochondrial lumen;4.49712228402825e-16!GO:0005759;mitochondrial matrix;4.49712228402825e-16!GO:0019941;modification-dependent protein catabolic process;7.01882108536008e-16!GO:0043632;modification-dependent macromolecule catabolic process;7.01882108536008e-16!GO:0030163;protein catabolic process;1.01329402787514e-15!GO:0044257;cellular protein catabolic process;1.18836446575192e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.36832466004909e-15!GO:0051186;cofactor metabolic process;1.44332783522187e-15!GO:0006605;protein targeting;1.48911984253948e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.49043096475771e-15!GO:0032553;ribonucleotide binding;1.65677649194798e-15!GO:0032555;purine ribonucleotide binding;1.65677649194798e-15!GO:0044265;cellular macromolecule catabolic process;1.84225833019096e-15!GO:0017076;purine nucleotide binding;1.84225833019096e-15!GO:0005694;chromosome;1.95236836313623e-15!GO:0006974;response to DNA damage stimulus;2.29561779728568e-15!GO:0008134;transcription factor binding;2.37525798365106e-15!GO:0051082;unfolded protein binding;2.54806491428093e-15!GO:0009057;macromolecule catabolic process;5.14768423349489e-15!GO:0050136;NADH dehydrogenase (quinone) activity;5.14768423349489e-15!GO:0003954;NADH dehydrogenase activity;5.14768423349489e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.14768423349489e-15!GO:0006512;ubiquitin cycle;7.54964136980249e-15!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.70241092837071e-15!GO:0008135;translation factor activity, nucleic acid binding;7.81425778701353e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.01513580578878e-14!GO:0016874;ligase activity;1.0799045682093e-14!GO:0044427;chromosomal part;2.05098823478472e-14!GO:0005761;mitochondrial ribosome;2.31078679480894e-14!GO:0000313;organellar ribosome;2.31078679480894e-14!GO:0005789;endoplasmic reticulum membrane;3.08812771799644e-14!GO:0048193;Golgi vesicle transport;5.26609269343566e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.52730809299564e-14!GO:0044248;cellular catabolic process;2.03266014246841e-13!GO:0000087;M phase of mitotic cell cycle;2.1448951542086e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.90376872909358e-13!GO:0042773;ATP synthesis coupled electron transport;2.90376872909358e-13!GO:0030964;NADH dehydrogenase complex (quinone);3.3680623348528e-13!GO:0045271;respiratory chain complex I;3.3680623348528e-13!GO:0005747;mitochondrial respiratory chain complex I;3.3680623348528e-13!GO:0007067;mitosis;3.62711848532432e-13!GO:0005793;ER-Golgi intermediate compartment;4.75558305483509e-13!GO:0006281;DNA repair;5.37876643663645e-13!GO:0051301;cell division;6.94237110935317e-13!GO:0016192;vesicle-mediated transport;7.27324509069564e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;9.13315671142812e-13!GO:0000375;RNA splicing, via transesterification reactions;9.13315671142812e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.13315671142812e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.01021230714461e-12!GO:0043412;biopolymer modification;1.01100879883937e-12!GO:0022403;cell cycle phase;1.28834406144241e-12!GO:0006732;coenzyme metabolic process;1.8983142831639e-12!GO:0042254;ribosome biogenesis and assembly;2.04815451110198e-12!GO:0005524;ATP binding;2.3508428866004e-12!GO:0003743;translation initiation factor activity;3.10865007344386e-12!GO:0012501;programmed cell death;3.40984038964503e-12!GO:0016070;RNA metabolic process;5.18503562815991e-12!GO:0032559;adenyl ribonucleotide binding;6.39660745234722e-12!GO:0009259;ribonucleotide metabolic process;6.75117561158824e-12!GO:0006260;DNA replication;7.05308250344377e-12!GO:0006915;apoptosis;8.65518188679392e-12!GO:0030554;adenyl nucleotide binding;9.49893167324331e-12!GO:0006413;translational initiation;9.88298810801008e-12!GO:0005635;nuclear envelope;1.16261726529378e-11!GO:0051726;regulation of cell cycle;1.53242545211972e-11!GO:0006163;purine nucleotide metabolic process;1.62417346947656e-11!GO:0016887;ATPase activity;1.67038220756583e-11!GO:0048523;negative regulation of cellular process;1.75333515114638e-11!GO:0051276;chromosome organization and biogenesis;1.78095633966715e-11!GO:0000074;regulation of progression through cell cycle;1.86930445211484e-11!GO:0006464;protein modification process;2.06367657177683e-11!GO:0009055;electron carrier activity;2.47702390600204e-11!GO:0031965;nuclear membrane;2.47702390600204e-11!GO:0009719;response to endogenous stimulus;4.22399584812408e-11!GO:0009150;purine ribonucleotide metabolic process;4.2604194455865e-11!GO:0042623;ATPase activity, coupled;7.43285269068669e-11!GO:0008219;cell death;7.43285269068669e-11!GO:0016265;death;7.43285269068669e-11!GO:0044453;nuclear membrane part;1.25390836869016e-10!GO:0006164;purine nucleotide biosynthetic process;1.45977729052034e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.78726152719946e-10!GO:0016604;nuclear body;2.02924156573138e-10!GO:0009260;ribonucleotide biosynthetic process;2.2164948096022e-10!GO:0000279;M phase;2.98271605890369e-10!GO:0009152;purine ribonucleotide biosynthetic process;3.85821255459875e-10!GO:0009199;ribonucleoside triphosphate metabolic process;5.42863201404941e-10!GO:0009141;nucleoside triphosphate metabolic process;5.42863201404941e-10!GO:0006913;nucleocytoplasmic transport;5.51186104119175e-10!GO:0006446;regulation of translational initiation;7.14643257251409e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.3602582512773e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.9094273965641e-10!GO:0009144;purine nucleoside triphosphate metabolic process;9.9094273965641e-10!GO:0048519;negative regulation of biological process;1.10384085383343e-09!GO:0051169;nuclear transport;1.13087979702332e-09!GO:0003712;transcription cofactor activity;1.96178624277996e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;2.69226305994758e-09!GO:0015986;ATP synthesis coupled proton transport;3.41602866607894e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.41602866607894e-09!GO:0043687;post-translational protein modification;4.04397284139919e-09!GO:0005768;endosome;4.16867154548629e-09!GO:0009142;nucleoside triphosphate biosynthetic process;4.42913329751764e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.42913329751764e-09!GO:0003924;GTPase activity;5.84478092664025e-09!GO:0006888;ER to Golgi vesicle-mediated transport;5.84478092664025e-09!GO:0009060;aerobic respiration;6.37194451271381e-09!GO:0065004;protein-DNA complex assembly;6.80842646173926e-09!GO:0006323;DNA packaging;7.54144371465382e-09!GO:0008639;small protein conjugating enzyme activity;7.57206984256948e-09!GO:0046034;ATP metabolic process;8.00716258884454e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.1200191286111e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.1200191286111e-09!GO:0016491;oxidoreductase activity;8.7381780469474e-09!GO:0019787;small conjugating protein ligase activity;8.91399591053879e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.52688736038755e-09!GO:0006333;chromatin assembly or disassembly;1.05825275099737e-08!GO:0005788;endoplasmic reticulum lumen;1.26964051151851e-08!GO:0008565;protein transporter activity;1.30553480265495e-08!GO:0004842;ubiquitin-protein ligase activity;1.46924181620267e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.67474278236669e-08!GO:0051246;regulation of protein metabolic process;1.86455864530197e-08!GO:0009056;catabolic process;1.97211507362701e-08!GO:0004386;helicase activity;1.98438057930521e-08!GO:0045333;cellular respiration;2.36961101394265e-08!GO:0044431;Golgi apparatus part;2.39712040515649e-08!GO:0019829;cation-transporting ATPase activity;2.58277956181732e-08!GO:0005643;nuclear pore;2.66801864594414e-08!GO:0006399;tRNA metabolic process;2.77202302461305e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.15210378253084e-08!GO:0030532;small nuclear ribonucleoprotein complex;3.20153834408228e-08!GO:0000785;chromatin;3.42693862341376e-08!GO:0015630;microtubule cytoskeleton;3.87612158319324e-08!GO:0017038;protein import;4.02474458280988e-08!GO:0006364;rRNA processing;4.26961161062678e-08!GO:0016607;nuclear speck;4.5737096090962e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.68314960826832e-08!GO:0065002;intracellular protein transport across a membrane;4.73825736479001e-08!GO:0006754;ATP biosynthetic process;5.4342942430583e-08!GO:0006753;nucleoside phosphate metabolic process;5.4342942430583e-08!GO:0008026;ATP-dependent helicase activity;6.7740482852508e-08!GO:0016072;rRNA metabolic process;7.6905624247974e-08!GO:0030120;vesicle coat;8.43089322677298e-08!GO:0030662;coated vesicle membrane;8.43089322677298e-08!GO:0016881;acid-amino acid ligase activity;8.93370831551756e-08!GO:0006461;protein complex assembly;9.02738347687017e-08!GO:0051188;cofactor biosynthetic process;9.09490174447213e-08!GO:0006099;tricarboxylic acid cycle;1.07124467097224e-07!GO:0046356;acetyl-CoA catabolic process;1.07124467097224e-07!GO:0006366;transcription from RNA polymerase II promoter;1.10580710469108e-07!GO:0006334;nucleosome assembly;1.15705419965142e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.78435446873379e-07!GO:0009117;nucleotide metabolic process;1.8237925282871e-07!GO:0043067;regulation of programmed cell death;2.05592287480552e-07!GO:0050794;regulation of cellular process;2.24598383608496e-07!GO:0042981;regulation of apoptosis;2.58807027396078e-07!GO:0043069;negative regulation of programmed cell death;2.85629141575412e-07!GO:0016787;hydrolase activity;2.87295421130405e-07!GO:0006084;acetyl-CoA metabolic process;3.33489217236509e-07!GO:0051187;cofactor catabolic process;3.41889912846616e-07!GO:0015078;hydrogen ion transmembrane transporter activity;4.2452516114052e-07!GO:0046930;pore complex;4.52449782119671e-07!GO:0005770;late endosome;4.63610002692567e-07!GO:0043566;structure-specific DNA binding;5.31426644280088e-07!GO:0031497;chromatin assembly;5.33626281418305e-07!GO:0003697;single-stranded DNA binding;5.63559568254557e-07!GO:0006916;anti-apoptosis;6.187565789606e-07!GO:0050657;nucleic acid transport;6.45834660734146e-07!GO:0051236;establishment of RNA localization;6.45834660734146e-07!GO:0050658;RNA transport;6.45834660734146e-07!GO:0006403;RNA localization;6.45834660734146e-07!GO:0043066;negative regulation of apoptosis;6.50585087152388e-07!GO:0009109;coenzyme catabolic process;7.16831211338877e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.28510999080682e-07!GO:0016853;isomerase activity;7.49379133976703e-07!GO:0044440;endosomal part;7.74430323632317e-07!GO:0010008;endosome membrane;7.74430323632317e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.76854092670519e-07!GO:0005773;vacuole;8.34369250678016e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.29290194349463e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.29290194349463e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.29290194349463e-06!GO:0043038;amino acid activation;1.4428501454057e-06!GO:0006418;tRNA aminoacylation for protein translation;1.4428501454057e-06!GO:0043039;tRNA aminoacylation;1.4428501454057e-06!GO:0048475;coated membrane;1.4614952728572e-06!GO:0030117;membrane coat;1.4614952728572e-06!GO:0005525;GTP binding;1.61996398972287e-06!GO:0000139;Golgi membrane;1.83002863100577e-06!GO:0031252;leading edge;1.83855724466624e-06!GO:0031988;membrane-bound vesicle;1.95358598997623e-06!GO:0045259;proton-transporting ATP synthase complex;1.96197221746495e-06!GO:0016023;cytoplasmic membrane-bound vesicle;2.16090328619909e-06!GO:0008654;phospholipid biosynthetic process;2.25081218193599e-06!GO:0000245;spliceosome assembly;2.28128224933999e-06!GO:0009108;coenzyme biosynthetic process;2.67573437573471e-06!GO:0006752;group transfer coenzyme metabolic process;3.54036592698888e-06!GO:0006613;cotranslational protein targeting to membrane;3.55075364607686e-06!GO:0005813;centrosome;3.55584182048731e-06!GO:0000775;chromosome, pericentric region;3.97493796452872e-06!GO:0031324;negative regulation of cellular metabolic process;3.97493796452872e-06!GO:0004298;threonine endopeptidase activity;4.61974819022747e-06!GO:0045786;negative regulation of progression through cell cycle;4.80625038863828e-06!GO:0005667;transcription factor complex;5.61185519943461e-06!GO:0005819;spindle;5.65679284649046e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.750004315949e-06!GO:0005798;Golgi-associated vesicle;5.75201742906727e-06!GO:0016740;transferase activity;6.10188333700001e-06!GO:0007005;mitochondrion organization and biogenesis;6.31271254197406e-06!GO:0005815;microtubule organizing center;6.60722162632543e-06!GO:0051170;nuclear import;6.73474629216639e-06!GO:0000323;lytic vacuole;7.09448314544741e-06!GO:0005764;lysosome;7.09448314544741e-06!GO:0016779;nucleotidyltransferase activity;7.81857418256292e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;8.2275174725109e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.2275174725109e-06!GO:0006793;phosphorus metabolic process;8.60851247047517e-06!GO:0006796;phosphate metabolic process;8.60851247047517e-06!GO:0016859;cis-trans isomerase activity;8.63866880809269e-06!GO:0031982;vesicle;9.55524191519587e-06!GO:0048522;positive regulation of cellular process;9.9686513921041e-06!GO:0006091;generation of precursor metabolites and energy;1.01339597250548e-05!GO:0006950;response to stress;1.16210416499133e-05!GO:0032561;guanyl ribonucleotide binding;1.20772457059888e-05!GO:0019001;guanyl nucleotide binding;1.20772457059888e-05!GO:0005769;early endosome;1.36193736340682e-05!GO:0032446;protein modification by small protein conjugation;1.39243246835817e-05!GO:0031410;cytoplasmic vesicle;1.4070268103876e-05!GO:0051329;interphase of mitotic cell cycle;1.47747647810092e-05!GO:0009892;negative regulation of metabolic process;1.48775596876455e-05!GO:0006606;protein import into nucleus;1.58004446606968e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.66481512056628e-05!GO:0051028;mRNA transport;1.67868074570737e-05!GO:0016564;transcription repressor activity;1.80527883901271e-05!GO:0016310;phosphorylation;1.95447568139643e-05!GO:0005762;mitochondrial large ribosomal subunit;1.96475738346915e-05!GO:0000315;organellar large ribosomal subunit;1.96475738346915e-05!GO:0007051;spindle organization and biogenesis;2.20987357355752e-05!GO:0007243;protein kinase cascade;2.25934896330814e-05!GO:0003714;transcription corepressor activity;2.26660259478169e-05!GO:0016567;protein ubiquitination;2.3412728946057e-05!GO:0006261;DNA-dependent DNA replication;2.34611011994019e-05!GO:0030867;rough endoplasmic reticulum membrane;2.37978217425653e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.38115622871941e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.40933318096876e-05!GO:0019843;rRNA binding;2.80537803635323e-05!GO:0045454;cell redox homeostasis;3.78596689688905e-05!GO:0051789;response to protein stimulus;3.89513200901869e-05!GO:0006986;response to unfolded protein;3.89513200901869e-05!GO:0006612;protein targeting to membrane;5.66201299823402e-05!GO:0003724;RNA helicase activity;5.81600722147142e-05!GO:0000151;ubiquitin ligase complex;6.11765544089815e-05!GO:0051325;interphase;6.15654878335802e-05!GO:0043623;cellular protein complex assembly;7.32049616367367e-05!GO:0033116;ER-Golgi intermediate compartment membrane;7.70256897707982e-05!GO:0050789;regulation of biological process;7.71636005567823e-05!GO:0007010;cytoskeleton organization and biogenesis;7.75130352353958e-05!GO:0043021;ribonucleoprotein binding;8.48146944313355e-05!GO:0016568;chromatin modification;9.29666839148966e-05!GO:0030133;transport vesicle;9.30102620280502e-05!GO:0005657;replication fork;9.83440063812738e-05!GO:0031968;organelle outer membrane;0.000100262433684103!GO:0019867;outer membrane;0.000115138567605399!GO:0000314;organellar small ribosomal subunit;0.000130947595092245!GO:0005763;mitochondrial small ribosomal subunit;0.000130947595092245!GO:0005048;signal sequence binding;0.000134613213997346!GO:0015980;energy derivation by oxidation of organic compounds;0.000135849497991997!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000141705535005146!GO:0005791;rough endoplasmic reticulum;0.00015789011791997!GO:0005905;coated pit;0.000159555648564191!GO:0051427;hormone receptor binding;0.000164993767665891!GO:0000075;cell cycle checkpoint;0.000170466358727797!GO:0009165;nucleotide biosynthetic process;0.000178802025879225!GO:0046474;glycerophospholipid biosynthetic process;0.000190919675538715!GO:0003713;transcription coactivator activity;0.000193941010129109!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000201392881510391!GO:0008094;DNA-dependent ATPase activity;0.000255507809551419!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000272677019429509!GO:0000786;nucleosome;0.000276049151792368!GO:0004576;oligosaccharyl transferase activity;0.000276200100305214!GO:0030029;actin filament-based process;0.000284488691997031!GO:0003899;DNA-directed RNA polymerase activity;0.000309846407416248!GO:0005885;Arp2/3 protein complex;0.000317494620165663!GO:0000776;kinetochore;0.000332190186125009!GO:0065009;regulation of a molecular function;0.000337113823888385!GO:0035257;nuclear hormone receptor binding;0.000344952571714915!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000352432418111939!GO:0008250;oligosaccharyl transferase complex;0.00036956051756493!GO:0008361;regulation of cell size;0.000372976569101464!GO:0016563;transcription activator activity;0.000391906031503418!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000424283711468057!GO:0006302;double-strand break repair;0.00044720254019129!GO:0005741;mitochondrial outer membrane;0.000467607821401164!GO:0016049;cell growth;0.000491269442745263!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000497760030258635!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000529262142851917!GO:0046467;membrane lipid biosynthetic process;0.000541399107148283!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000556535374199001!GO:0016363;nuclear matrix;0.000562714279200917!GO:0031072;heat shock protein binding;0.000625666750225831!GO:0018196;peptidyl-asparagine modification;0.000639482850558765!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000639482850558765!GO:0019899;enzyme binding;0.000652994605468859!GO:0001558;regulation of cell growth;0.000691309094972813!GO:0016481;negative regulation of transcription;0.000704715384655449!GO:0016126;sterol biosynthetic process;0.000783932450392426!GO:0043681;protein import into mitochondrion;0.000801615303444032!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000805224658353552!GO:0051920;peroxiredoxin activity;0.00086606668755481!GO:0003690;double-stranded DNA binding;0.000925258047176095!GO:0030663;COPI coated vesicle membrane;0.000970994982579392!GO:0030126;COPI vesicle coat;0.000970994982579392!GO:0006626;protein targeting to mitochondrion;0.00107491862934704!GO:0048518;positive regulation of biological process;0.00127220643662469!GO:0048500;signal recognition particle;0.00129323521174761!GO:0008047;enzyme activator activity;0.00131497317865161!GO:0042802;identical protein binding;0.00131823096535674!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00134062969525043!GO:0015399;primary active transmembrane transporter activity;0.00134062969525043!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00147925373811912!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00147925373811912!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00147925373811912!GO:0008092;cytoskeletal protein binding;0.00149585527694036!GO:0015631;tubulin binding;0.00150556217252724!GO:0046489;phosphoinositide biosynthetic process;0.00153172019375344!GO:0008610;lipid biosynthetic process;0.00165649090346454!GO:0030027;lamellipodium;0.00168920461910692!GO:0006414;translational elongation;0.00169944539085938!GO:0051168;nuclear export;0.00179400602453848!GO:0008186;RNA-dependent ATPase activity;0.00184776707461833!GO:0016044;membrane organization and biogenesis;0.00185746460243798!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00191832016383251!GO:0051252;regulation of RNA metabolic process;0.001999801478708!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00204627278717352!GO:0006891;intra-Golgi vesicle-mediated transport;0.00215190325733101!GO:0048487;beta-tubulin binding;0.00218459752709692!GO:0006383;transcription from RNA polymerase III promoter;0.00226662951589588!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00233507777600664!GO:0015992;proton transport;0.00240951706695307!GO:0006818;hydrogen transport;0.00258703571027075!GO:0000059;protein import into nucleus, docking;0.00261894642191169!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00269865349070328!GO:0045047;protein targeting to ER;0.00269865349070328!GO:0051052;regulation of DNA metabolic process;0.0028862988260279!GO:0003684;damaged DNA binding;0.00297599055497983!GO:0030176;integral to endoplasmic reticulum membrane;0.00312076420955003!GO:0008312;7S RNA binding;0.00315259538100495!GO:0030658;transport vesicle membrane;0.00315629942787261!GO:0044262;cellular carbohydrate metabolic process;0.00317010118177752!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00319838195241171!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00348003908751453!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00348003908751453!GO:0030137;COPI-coated vesicle;0.00348003908751453!GO:0005684;U2-dependent spliceosome;0.00353699010825753!GO:0003729;mRNA binding;0.00355441761407331!GO:0007264;small GTPase mediated signal transduction;0.00355471146360416!GO:0007052;mitotic spindle organization and biogenesis;0.00361942391855792!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00380311494930208!GO:0035258;steroid hormone receptor binding;0.00385734680707699!GO:0008283;cell proliferation;0.00396292468585661!GO:0000082;G1/S transition of mitotic cell cycle;0.0040762537950781!GO:0016197;endosome transport;0.00423167865206389!GO:0030132;clathrin coat of coated pit;0.00424596265468344!GO:0044452;nucleolar part;0.0043640725238096!GO:0007050;cell cycle arrest;0.00449805869207744!GO:0043284;biopolymer biosynthetic process;0.00450854963995397!GO:0004004;ATP-dependent RNA helicase activity;0.00454076228992482!GO:0008139;nuclear localization sequence binding;0.00478749439198699!GO:0008180;signalosome;0.00483803211092634!GO:0003678;DNA helicase activity;0.00489695121230272!GO:0007093;mitotic cell cycle checkpoint;0.00521652115188172!GO:0030880;RNA polymerase complex;0.00527452733532339!GO:0006509;membrane protein ectodomain proteolysis;0.0052788888790308!GO:0033619;membrane protein proteolysis;0.0052788888790308!GO:0022890;inorganic cation transmembrane transporter activity;0.00537809021050199!GO:0046519;sphingoid metabolic process;0.00557933336666567!GO:0008033;tRNA processing;0.00565898076111879!GO:0030521;androgen receptor signaling pathway;0.0057982480177853!GO:0007088;regulation of mitosis;0.0057982480177853!GO:0008154;actin polymerization and/or depolymerization;0.00585194753808916!GO:0007006;mitochondrial membrane organization and biogenesis;0.00598723816651165!GO:0007059;chromosome segregation;0.00602573311221252!GO:0030134;ER to Golgi transport vesicle;0.0062292167326035!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00670287947287169!GO:0030660;Golgi-associated vesicle membrane;0.00688485218497777!GO:0050790;regulation of catalytic activity;0.00698926545837334!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00699705434735799!GO:0009967;positive regulation of signal transduction;0.0070490619963752!GO:0030041;actin filament polymerization;0.00713384557391902!GO:0031902;late endosome membrane;0.00724167587580834!GO:0031901;early endosome membrane;0.00742759259712391!GO:0048471;perinuclear region of cytoplasm;0.00742759259712391!GO:0001726;ruffle;0.00746301866443637!GO:0005874;microtubule;0.00750121255419879!GO:0065007;biological regulation;0.00752212246067843!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00755785913437781!GO:0005774;vacuolar membrane;0.00774286779172055!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00774286779172055!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00774286779172055!GO:0016272;prefoldin complex;0.007920589678337!GO:0008632;apoptotic program;0.00807958469743423!GO:0051087;chaperone binding;0.00819735938586236!GO:0006595;polyamine metabolic process;0.00848841202870935!GO:0005869;dynactin complex;0.00853122841440913!GO:0003711;transcription elongation regulator activity;0.00855369518745033!GO:0006275;regulation of DNA replication;0.00859313742070848!GO:0030127;COPII vesicle coat;0.00868164119251664!GO:0012507;ER to Golgi transport vesicle membrane;0.00868164119251664!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00890047012821508!GO:0043492;ATPase activity, coupled to movement of substances;0.00892135052519056!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00908318970158771!GO:0015002;heme-copper terminal oxidase activity;0.00908318970158771!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00908318970158771!GO:0004129;cytochrome-c oxidase activity;0.00908318970158771!GO:0006650;glycerophospholipid metabolic process;0.00944156067187714!GO:0006839;mitochondrial transport;0.00950722445848686!GO:0051540;metal cluster binding;0.00959099825851575!GO:0051536;iron-sulfur cluster binding;0.00959099825851575!GO:0000339;RNA cap binding;0.00967003820509896!GO:0016860;intramolecular oxidoreductase activity;0.00989273194697961!GO:0007034;vacuolar transport;0.00990451419196196!GO:0017166;vinculin binding;0.00999513560456842!GO:0006672;ceramide metabolic process;0.00999620015120998!GO:0033673;negative regulation of kinase activity;0.0100763593362939!GO:0006469;negative regulation of protein kinase activity;0.0100763593362939!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0102315331324007!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0106367572049891!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0108153179677494!GO:0000428;DNA-directed RNA polymerase complex;0.0108153179677494!GO:0005862;muscle thin filament tropomyosin;0.0109354044097527!GO:0006497;protein amino acid lipidation;0.0112080710306214!GO:0030518;steroid hormone receptor signaling pathway;0.0112683521500434!GO:0006695;cholesterol biosynthetic process;0.0112683521500434!GO:0043488;regulation of mRNA stability;0.0112683521500434!GO:0043487;regulation of RNA stability;0.0112683521500434!GO:0008022;protein C-terminus binding;0.0115596597297913!GO:0006979;response to oxidative stress;0.0116991390073367!GO:0051270;regulation of cell motility;0.0117311159331686!GO:0046483;heterocycle metabolic process;0.0117673175373087!GO:0043022;ribosome binding;0.0118225230278325!GO:0030118;clathrin coat;0.0118673409002169!GO:0006118;electron transport;0.01207790766451!GO:0007040;lysosome organization and biogenesis;0.0121360310879602!GO:0003682;chromatin binding;0.0121596748362564!GO:0045045;secretory pathway;0.0123728842944319!GO:0048144;fibroblast proliferation;0.0124778727609897!GO:0048145;regulation of fibroblast proliferation;0.0124778727609897!GO:0005832;chaperonin-containing T-complex;0.012491670726495!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0125954966837634!GO:0005138;interleukin-6 receptor binding;0.0127008008777094!GO:0003746;translation elongation factor activity;0.0129030721652052!GO:0048468;cell development;0.0129823756483065!GO:0008243;plasminogen activator activity;0.0131599977483062!GO:0005637;nuclear inner membrane;0.0133822331210017!GO:0050681;androgen receptor binding;0.0135645251071855!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0135714184578079!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0135830551597481!GO:0005096;GTPase activator activity;0.0139340978132665!GO:0051348;negative regulation of transferase activity;0.0139842280433181!GO:0030659;cytoplasmic vesicle membrane;0.0140774838479031!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0141494097772989!GO:0051128;regulation of cellular component organization and biogenesis;0.0141680473854473!GO:0006352;transcription initiation;0.0146669632736872!GO:0006310;DNA recombination;0.0146935515046868!GO:0006401;RNA catabolic process;0.0151992554684711!GO:0051539;4 iron, 4 sulfur cluster binding;0.0152320002061298!GO:0019222;regulation of metabolic process;0.0155647174278955!GO:0030125;clathrin vesicle coat;0.0155711152644401!GO:0030665;clathrin coated vesicle membrane;0.0155711152644401!GO:0040008;regulation of growth;0.0156338458822781!GO:0032508;DNA duplex unwinding;0.0160062563480303!GO:0032392;DNA geometric change;0.0160062563480303!GO:0004177;aminopeptidase activity;0.0162718579735899!GO:0031418;L-ascorbic acid binding;0.0162718579735899!GO:0006402;mRNA catabolic process;0.0168312462208124!GO:0006506;GPI anchor biosynthetic process;0.0170150366282984!GO:0032984;macromolecular complex disassembly;0.0174442753570892!GO:0048146;positive regulation of fibroblast proliferation;0.0176976497240388!GO:0030833;regulation of actin filament polymerization;0.0176976497240388!GO:0006611;protein export from nucleus;0.0176976497240388!GO:0044437;vacuolar part;0.0181060990531314!GO:0045941;positive regulation of transcription;0.018299185510849!GO:0031124;mRNA 3'-end processing;0.0184347556351632!GO:0000910;cytokinesis;0.018480606514037!GO:0050662;coenzyme binding;0.018480606514037!GO:0016408;C-acyltransferase activity;0.0188048472707628!GO:0004527;exonuclease activity;0.0188253052876388!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0190144245102165!GO:0009116;nucleoside metabolic process;0.0194220132444666!GO:0006417;regulation of translation;0.0194864895843018!GO:0045893;positive regulation of transcription, DNA-dependent;0.0200880613664346!GO:0006505;GPI anchor metabolic process;0.0202655625488681!GO:0045892;negative regulation of transcription, DNA-dependent;0.0202655625488681!GO:0000792;heterochromatin;0.0203469561801505!GO:0006289;nucleotide-excision repair;0.0214872587318256!GO:0019752;carboxylic acid metabolic process;0.0214967227920823!GO:0008064;regulation of actin polymerization and/or depolymerization;0.021744150667855!GO:0003756;protein disulfide isomerase activity;0.0219363939387275!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0219363939387275!GO:0005765;lysosomal membrane;0.0223291556788769!GO:0030433;ER-associated protein catabolic process;0.022499456929151!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.022499456929151!GO:0007033;vacuole organization and biogenesis;0.0226251484592513!GO:0006082;organic acid metabolic process;0.0232787322092792!GO:0006268;DNA unwinding during replication;0.0241143660754911!GO:0043065;positive regulation of apoptosis;0.0241143660754911!GO:0006778;porphyrin metabolic process;0.024377498793561!GO:0033013;tetrapyrrole metabolic process;0.024377498793561!GO:0031529;ruffle organization and biogenesis;0.0244328704605036!GO:0004287;prolyl oligopeptidase activity;0.0244689220695913!GO:0009112;nucleobase metabolic process;0.0246252527217917!GO:0005876;spindle microtubule;0.024968729008392!GO:0016584;nucleosome positioning;0.0250442557963288!GO:0008234;cysteine-type peptidase activity;0.025519657725364!GO:0022408;negative regulation of cell-cell adhesion;0.025590679014406!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0257574653455937!GO:0044433;cytoplasmic vesicle part;0.0259189462326248!GO:0006892;post-Golgi vesicle-mediated transport;0.0262517769530799!GO:0004003;ATP-dependent DNA helicase activity;0.0263800508409865!GO:0000096;sulfur amino acid metabolic process;0.0265245184319945!GO:0050811;GABA receptor binding;0.027393224037646!GO:0016251;general RNA polymerase II transcription factor activity;0.0275169323654471!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.028037831420658!GO:0033043;regulation of organelle organization and biogenesis;0.028037831420658!GO:0000049;tRNA binding;0.028066116449537!GO:0042168;heme metabolic process;0.0280860877994587!GO:0043068;positive regulation of programmed cell death;0.0286000361308567!GO:0009889;regulation of biosynthetic process;0.0286000361308567!GO:0042158;lipoprotein biosynthetic process;0.0286389591307247!GO:0043241;protein complex disassembly;0.0287084021759444!GO:0043596;nuclear replication fork;0.0287084021759444!GO:0043086;negative regulation of catalytic activity;0.0287084021759444!GO:0006607;NLS-bearing substrate import into nucleus;0.0289868482495713!GO:0007346;regulation of progression through mitotic cell cycle;0.0292999280400855!GO:0031625;ubiquitin protein ligase binding;0.0299236192899497!GO:0006144;purine base metabolic process;0.0299236192899497!GO:0004674;protein serine/threonine kinase activity;0.0299236192899497!GO:0031371;ubiquitin conjugating enzyme complex;0.0299333092420214!GO:0008538;proteasome activator activity;0.0309243189879789!GO:0007021;tubulin folding;0.0309671212411565!GO:0030508;thiol-disulfide exchange intermediate activity;0.0309920471701084!GO:0006740;NADPH regeneration;0.0310939437206143!GO:0006098;pentose-phosphate shunt;0.0310939437206143!GO:0006693;prostaglandin metabolic process;0.031153211030391!GO:0006692;prostanoid metabolic process;0.031153211030391!GO:0051101;regulation of DNA binding;0.0312330831874502!GO:0000922;spindle pole;0.0314913910778666!GO:0048660;regulation of smooth muscle cell proliferation;0.0317191721480351!GO:0006284;base-excision repair;0.0320233585214205!GO:0008147;structural constituent of bone;0.0333590170491043!GO:0006643;membrane lipid metabolic process;0.0336473832708686!GO:0005758;mitochondrial intermembrane space;0.033711065326857!GO:0051271;negative regulation of cell motility;0.0337908603794176!GO:0030384;phosphoinositide metabolic process;0.034220986935339!GO:0007041;lysosomal transport;0.0344898795727221!GO:0045792;negative regulation of cell size;0.0350354118903182!GO:0005092;GDP-dissociation inhibitor activity;0.0352761945378739!GO:0008168;methyltransferase activity;0.035279183220803!GO:0006376;mRNA splice site selection;0.035601720171486!GO:0000389;nuclear mRNA 3'-splice site recognition;0.035601720171486!GO:0004228;gelatinase A activity;0.035601720171486!GO:0001955;blood vessel maturation;0.035601720171486!GO:0006749;glutathione metabolic process;0.0357517617212148!GO:0051338;regulation of transferase activity;0.0358315336265098!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0358315336265098!GO:0005784;translocon complex;0.0358927290082606!GO:0031326;regulation of cellular biosynthetic process;0.0366678301777119!GO:0043130;ubiquitin binding;0.0366678301777119!GO:0032182;small conjugating protein binding;0.0366678301777119!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0369336871922093!GO:0030119;AP-type membrane coat adaptor complex;0.0369433612491057!GO:0012506;vesicle membrane;0.0371638151645107!GO:0006220;pyrimidine nucleotide metabolic process;0.0373373580495768!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0375813328030204!GO:0047485;protein N-terminus binding;0.0380961417248081!GO:0030145;manganese ion binding;0.0381056412323912!GO:0000287;magnesium ion binding;0.0381056412323912!GO:0000209;protein polyubiquitination;0.0381056412323912!GO:0005801;cis-Golgi network;0.038312524685928!GO:0006354;RNA elongation;0.038551630609768!GO:0030911;TPR domain binding;0.0385838552906004!GO:0030522;intracellular receptor-mediated signaling pathway;0.0386525839272435!GO:0032940;secretion by cell;0.0388939787387143!GO:0030308;negative regulation of cell growth;0.0391156758721022!GO:0031301;integral to organelle membrane;0.0392313101695623!GO:0019206;nucleoside kinase activity;0.0392848858607082!GO:0033559;unsaturated fatty acid metabolic process;0.0393004898039733!GO:0006636;unsaturated fatty acid biosynthetic process;0.0393004898039733!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0393743611115964!GO:0040011;locomotion;0.0393743611115964!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0396751820562421!GO:0006984;ER-nuclear signaling pathway;0.039826153910937!GO:0045936;negative regulation of phosphate metabolic process;0.0398547044931077!GO:0030032;lamellipodium biogenesis;0.0398547044931077!GO:0007017;microtubule-based process;0.0398547044931077!GO:0006635;fatty acid beta-oxidation;0.039986931363463!GO:0043624;cellular protein complex disassembly;0.039986931363463!GO:0035035;histone acetyltransferase binding;0.039986931363463!GO:0019798;procollagen-proline dioxygenase activity;0.0403547289242528!GO:0007030;Golgi organization and biogenesis;0.0412042960023815!GO:0004518;nuclease activity;0.0412042960023815!GO:0008408;3'-5' exonuclease activity;0.0418785924214301!GO:0031543;peptidyl-proline dioxygenase activity;0.0419043960693731!GO:0004532;exoribonuclease activity;0.0419043960693731!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0419043960693731!GO:0016741;transferase activity, transferring one-carbon groups;0.0422122430809175!GO:0006007;glucose catabolic process;0.0425212066509581!GO:0022415;viral reproductive process;0.0429095592271341!GO:0006378;mRNA polyadenylation;0.0431229024314756!GO:0030149;sphingolipid catabolic process;0.0432503336540192!GO:0009124;nucleoside monophosphate biosynthetic process;0.0437504978689756!GO:0009123;nucleoside monophosphate metabolic process;0.0437504978689756!GO:0043407;negative regulation of MAP kinase activity;0.0437504978689756!GO:0007162;negative regulation of cell adhesion;0.0439377645396901!GO:0031123;RNA 3'-end processing;0.0444702838783333!GO:0046426;negative regulation of JAK-STAT cascade;0.0445092256525475!GO:0006897;endocytosis;0.0445186973189554!GO:0010324;membrane invagination;0.0445186973189554!GO:0004448;isocitrate dehydrogenase activity;0.044543176555818!GO:0051287;NAD binding;0.0445934837281288!GO:0043433;negative regulation of transcription factor activity;0.0447791155202578!GO:0001666;response to hypoxia;0.0448286856517639!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0448583382985778!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0453850836659418!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0456825684995146!GO:0000030;mannosyltransferase activity;0.0461403963870055!GO:0009225;nucleotide-sugar metabolic process;0.0461787437370794!GO:0051059;NF-kappaB binding;0.0465164149499636!GO:0051272;positive regulation of cell motility;0.0465643209220739!GO:0040017;positive regulation of locomotion;0.0465643209220739!GO:0032200;telomere organization and biogenesis;0.0470312797391868!GO:0000723;telomere maintenance;0.0470312797391868!GO:0030496;midbody;0.0472406456128763!GO:0008637;apoptotic mitochondrial changes;0.0477436732637669!GO:0008383;manganese superoxide dismutase activity;0.0483521717625076!GO:0001315;age-dependent response to reactive oxygen species;0.0483521717625076!GO:0001953;negative regulation of cell-matrix adhesion;0.0486804966173229!GO:0040012;regulation of locomotion;0.0488679604289406!GO:0006405;RNA export from nucleus;0.0491200836351127!GO:0007242;intracellular signaling cascade;0.049406980018111!GO:0007004;telomere maintenance via telomerase;0.0494758902486099
|sample_id=11755
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=heart
|top_motifs=ALX4:2.13818664533;HSF1,2:1.78439012774;EN1,2:1.7317158995;ALX1:1.46088461204;PAX1,9:1.40805421827;NKX3-1:1.36027109366;ZNF238:1.21407079847;FOX{I1,J2}:1.16169432168;POU3F1..4:1.13776454604;CDC5L:1.12746615123;NFATC1..3:1.019540064;EVI1:0.978100350101;HOX{A5,B5}:0.95841886933;IKZF1:0.89231523527;TAL1_TCF{3,4,12}:0.890728206572;MYBL2:0.866980484848;CRX:0.847343350179;HMX1:0.826431231141;UFEwm:0.807957072075;HOX{A4,D4}:0.800296039158;KLF4:0.755131765736;GATA4:0.751440215525;FOXL1:0.737807660522;NFE2L2:0.734140198048;ONECUT1,2:0.732579186814;NKX2-2,8:0.731430313449;ZNF384:0.691279491274;TBP:0.64107942101;NR3C1:0.616474993737;XBP1:0.613627163297;HBP1_HMGB_SSRP1_UBTF:0.566936746775;AIRE:0.558014313021;ELK1,4_GABP{A,B1}:0.554567070714;ARID5B:0.536462958989;PBX1:0.532961149169;NFIX:0.530471620363;ATF6:0.51246896263;TLX2:0.50899135929;FOS_FOS{B,L1}_JUN{B,D}:0.496895549155;CDX1,2,4:0.489598741137;BACH2:0.48774682989;JUN:0.480974381619;E2F1..5:0.476272153714;PAX8:0.471344610646;XCPE1{core}:0.464396865756;HLF:0.447640291165;GTF2A1,2:0.446263835312;EBF1:0.441174160801;TLX1..3_NFIC{dimer}:0.429997214551;MYB:0.416708643052;GFI1B:0.41175604599;TEAD1:0.411651970633;ZBTB6:0.411138140072;TFDP1:0.397267424829;NANOG{mouse}:0.394931895227;TBX4,5:0.385855193146;MAFB:0.366450060677;NKX2-1,4:0.356786245645;FOXM1:0.350266761768;PRDM1:0.348070936529;SMAD1..7,9:0.34347692631;HMGA1,2:0.333261315264;GFI1:0.327933470692;DBP:0.320350312792;PAX5:0.310907402949;POU1F1:0.286239916733;NFE2L1:0.282720188674;POU5F1:0.282640892197;SRF:0.273128384677;ZIC1..3:0.271709547507;bHLH_family:0.241981826923;RXR{A,B,G}:0.230770882944;ESRRA:0.226404833822;GTF2I:0.198498537144;TP53:0.196751028373;FOSL2:0.188696284463;GZF1:0.176547893364;NKX3-2:0.176198369581;LHX3,4:0.175902045098;PAX3,7:0.167561139133;SOX{8,9,10}:0.164356757609;BPTF:0.162760628913;HIF1A:0.157609256324;HES1:0.153841006517;ELF1,2,4:0.146029093673;ZBTB16:0.129161858991;RFX1:0.126627356771;NFE2:0.123320130775;ZNF143:0.119738051123;NRF1:0.114479495792;FOXP3:0.111947220141;PAX4:0.101828173547;MEF2{A,B,C,D}:0.0997639157801;STAT2,4,6:0.0934247251217;GCM1,2:0.0698112746331;HNF1A:0.0604592445145;POU2F1..3:0.054778994567;NFKB1_REL_RELA:0.0303945114617;HAND1,2:0.0149862929403;ATF2:0.0146074967456;TFCP2:0.00689615653057;MAZ:0.00457037063156;MZF1:0.0028612078253;CREB1:-0.0176822507205;SOX17:-0.0307773137429;PAX2:-0.0319758068462;PRRX1,2:-0.0330708335459;CEBPA,B_DDIT3:-0.0395099439466;MTE{core}:-0.0406489211448;TFAP2B:-0.0411051903432;GLI1..3:-0.0588597399139;TFAP4:-0.065371436196;RUNX1..3:-0.0741023159523;LEF1_TCF7_TCF7L1,2:-0.0824070781557;AHR_ARNT_ARNT2:-0.108747040238;SPZ1:-0.112427939504;SOX2:-0.11487957306;NHLH1,2:-0.123700922691;SOX5:-0.131949397453;ATF5_CREB3:-0.132139651022;TEF:-0.137924131817;PPARG:-0.142208531794;ESR1:-0.153527985496;IKZF2:-0.162295949664;POU6F1:-0.17855981371;AR:-0.186998157916;ZFP161:-0.19101757969;YY1:-0.209449767254;NFIL3:-0.211592170227;MYFfamily:-0.216140576507;NFY{A,B,C}:-0.226085635541;ETS1,2:-0.226430252947;IRF1,2:-0.22754891315;STAT1,3:-0.231392299623;SPI1:-0.234502479662;SREBF1,2:-0.23948937801;PATZ1:-0.269321184266;MED-1{core}:-0.273295725352;REST:-0.276914725122;RXRA_VDR{dimer}:-0.285769478919;RBPJ:-0.296368779065;MTF1:-0.302061142239;ZNF148:-0.317876208317;TGIF1:-0.329976546136;HIC1:-0.330158956618;GATA6:-0.336888469448;SPIB:-0.35200723147;PAX6:-0.3646995377;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.375155482098;HNF4A_NR2F1,2:-0.385458137775;NKX6-1,2:-0.387331748234;FOXD3:-0.3936973497;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.399994218916;HOXA9_MEIS1:-0.410201204013;TFAP2{A,C}:-0.424788890466;NR6A1:-0.425671935216;LMO2:-0.428368558363;DMAP1_NCOR{1,2}_SMARC:-0.431055280721;ZNF423:-0.434214227504;NR1H4:-0.436938495163;RFX2..5_RFXANK_RFXAP:-0.451972590811;EGR1..3:-0.472131896146;FOXN1:-0.476278711915;IRF7:-0.476480772735;FOXQ1:-0.490518138374;ATF4:-0.497914513195;SP1:-0.556266706624;FOXP1:-0.583108450343;CUX2:-0.605607082932;EP300:-0.633093707319;PDX1:-0.63613931936;NR5A1,2:-0.657002308484;NKX2-3_NKX2-5:-0.682350904411;STAT5{A,B}:-0.692860670799;TOPORS:-0.756249324717;ADNP_IRX_SIX_ZHX:-0.763693358502;FOX{D1,D2}:-0.795490037159;VSX1,2:-0.801447298692;HOX{A6,A7,B6,B7}:-0.806352628265;FOXO1,3,4:-0.82280862049;OCT4_SOX2{dimer}:-0.830191343323;FOX{F1,F2,J1}:-0.8313683296;SNAI1..3:-0.838717729781;RREB1:-0.846275301286;BREu{core}:-0.867810044703;RORA:-0.886526481813;ZEB1:-0.890330955769;NANOG:-0.898304096963;FOXA2:-1.00789945651;MYOD1:-1.1376008977;PITX1..3:-1.20622601927;T:-1.52124557986
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11755-123G9;search_select_hide=table117:FF:11755-123G9
}}
}}

Latest revision as of 18:18, 4 June 2020

Name:mesenchymal precursor cell - cardiac, donor4
Species:Human (Homo sapiens)
Library ID:CNhs12371
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueheart
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005356
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12371 CAGE DRX008554 DRR009426
Accession ID Hg19

Library idBAMCTSS
CNhs12371 DRZ000851 DRZ002236
Accession ID Hg38

Library idBAMCTSS
CNhs12371 DRZ012201 DRZ013586
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0137
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.322
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.276
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.126
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0413
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.309
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.12
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0758
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.306
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0599
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.0599
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.00578
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0102
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.232
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.172
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.113
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.367
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.24
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.329
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.597
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.309
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.394
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12371

Jaspar motifP-value
MA0002.20.202
MA0003.10.723
MA0004.10.292
MA0006.10.456
MA0007.10.549
MA0009.10.341
MA0014.10.641
MA0017.10.513
MA0018.20.074
MA0019.10.302
MA0024.10.126
MA0025.10.196
MA0027.10.9
MA0028.10.00442
MA0029.10.701
MA0030.10.107
MA0031.10.0228
MA0035.20.0204
MA0038.10.47
MA0039.20.00991
MA0040.10.487
MA0041.10.517
MA0042.10.941
MA0043.10.259
MA0046.10.0633
MA0047.20.716
MA0048.10.113
MA0050.10.0169
MA0051.10.132
MA0052.10.641
MA0055.10.0208
MA0057.10.663
MA0058.10.234
MA0059.10.669
MA0060.10.00161
MA0061.10.428
MA0062.20.51
MA0065.20.154
MA0066.10.756
MA0067.10.133
MA0068.10.67
MA0069.10.441
MA0070.10.801
MA0071.10.136
MA0072.10.671
MA0073.10.53
MA0074.10.359
MA0076.10.0347
MA0077.10.619
MA0078.10.348
MA0079.20.137
MA0080.23.74578e-5
MA0081.10.366
MA0083.10.0596
MA0084.10.0496
MA0087.10.331
MA0088.10.636
MA0090.10.0178
MA0091.10.385
MA0092.10.442
MA0093.10.531
MA0099.22.03427e-9
MA0100.10.757
MA0101.10.0527
MA0102.20.558
MA0103.11.95124e-5
MA0104.20.293
MA0105.10.102
MA0106.10.333
MA0107.10.113
MA0108.20.00298
MA0111.10.138
MA0112.20.338
MA0113.10.911
MA0114.10.141
MA0115.10.376
MA0116.10.511
MA0117.10.681
MA0119.10.132
MA0122.10.698
MA0124.10.681
MA0125.10.282
MA0131.10.966
MA0135.10.104
MA0136.18.29483e-4
MA0137.20.163
MA0138.20.16
MA0139.10.842
MA0140.10.418
MA0141.10.76
MA0142.10.774
MA0143.10.819
MA0144.10.0506
MA0145.10.59
MA0146.10.0361
MA0147.10.623
MA0148.10.672
MA0149.10.812
MA0150.10.0199
MA0152.10.0022
MA0153.10.39
MA0154.10.511
MA0155.10.959
MA0156.10.615
MA0157.10.0254
MA0159.10.782
MA0160.10.275
MA0162.10.145
MA0163.10.0156
MA0164.10.886
MA0258.10.305
MA0259.10.362



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12371

Novel motifP-value
10.754
100.246
1000.763
1010.501
1020.445
1030.121
1040.898
1050.153
1060.769
1070.361
1080.405
1090.637
110.651
1100.15
1110.196
1120.879
1130.00394
1140.768
1150.444
1160.0705
1170.336
1180.471
1190.956
120.583
1200.133
1210.924
1220.354
1231.3611e-4
1240.0635
1250.287
1260.55
1270.616
1280.945
1290.328
130.49
1300.208
1310.0696
1320.705
1330.632
1340.438
1350.45
1360.766
1370.985
1380.952
1390.297
140.2
1400.92
1410.92
1420.435
1430.191
1440.463
1450.761
1460.763
1470.0633
1480.483
1490.83
150.643
1500.0125
1510.154
1520.453
1530.479
1540.503
1550.00586
1560.345
1570.461
1580.0117
1590.0689
160.187
1600.797
1610.0295
1620.495
1630.289
1640.094
1650.61
1660.324
1670.532
1680.434
1690.418
170.912
180.119
190.284
20.958
200.844
210.943
220.987
230.211
240.498
250.159
260.47
270.463
280.483
290.0615
30.477
300.963
310.788
320.0018
330.273
340.649
350.625
360.492
370.11
380.438
390.311
40.271
400.33
410.923
420.972
430.677
440.505
450.574
460.547
470.94
480.707
490.0385
50.854
500.841
510.707
520.411
530.0162
540.753
550.389
560.207
570.974
580.17
590.96
60.289
600.576
610.474
620.559
630.996
640.533
650.991
660.643
670.609
680.766
690.352
70.321
700.138
710.591
720.95
730.0689
740.124
750.644
760.235
770.102
780.154
790.164
80.449
800.606
810.975
820.0932
830.891
840.787
850.435
860.351
870.0267
880.556
890.0684
90.612
900.244
910.596
920.852
930.511
940.907
950.134
960.821
970.418
980.111
990.106



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12371


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000034 (stem cell)
0000569 (cardiac mesenchymal cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002384 (connective tissue)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000271 (human cardiac mesenchymal precursor cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000134 (mesenchymal cell)
CL:0000011 (migratory trunk neural crest cell)
CL:0000221 (ectodermal cell)