FFCP PHASE1:Mm9::chr7:25292118..25292129,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232969 | |EntrezGene=232969 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1427 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C1M2 | |UniProt=Q8C1M2 | ||
|association_with_transcript=12bp_to_ENSMUST00000071361,NM_146183,uc009fpt.2,uc009fpu.2_5end | |association_with_transcript=12bp_to_ENSMUST00000071361,NM_146183,uc009fpt.2,uc009fpu.2_5end | ||
|cluster_id=chr7:25292118..25292129,+ | |||
|description=CAGE_peak_8_at_Zfp428_5end | |description=CAGE_peak_8_at_Zfp428_5end | ||
|id=chr7:25292118..25292129,+ | |id=chr7:25292118..25292129,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.13e-21!44;CL:0000133!3.13e-21!44;CL:0002319!8.87e-21!43;CL:0000055!1.39e-18!50;CL:0000540!7.67e-16!33;CL:0000047!7.67e-16!33;CL:0000031!7.67e-16!33;CL:0000404!7.67e-16!33;CL:0000393!1.42e-14!39;CL:0000211!1.42e-14!39;CL:0000117!2.42e-14!23;CL:0000337!2.42e-14!23;CL:0002321!1.79e-13!70;CL:0000220!1.79e-13!70 | |ontology_enrichment_celltype=CL:0000221!3.13e-21!44;CL:0000133!3.13e-21!44;CL:0002319!8.87e-21!43;CL:0000055!1.39e-18!50;CL:0000540!7.67e-16!33;CL:0000047!7.67e-16!33;CL:0000031!7.67e-16!33;CL:0000404!7.67e-16!33;CL:0000393!1.42e-14!39;CL:0000211!1.42e-14!39;CL:0000117!2.42e-14!23;CL:0000337!2.42e-14!23;CL:0002321!1.79e-13!70;CL:0000220!1.79e-13!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.68e-30,43;CL:0000221,1.30e-29,44;CL:0000133,1.30e-29,44;CL:0000117,1.23e-26,23;CL:0000337,1.23e-26,23;CL:0000540,2.44e-22,33;CL:0000047,2.44e-22,33;CL:0000031,2.44e-22,33;CL:0000404,2.44e-22,33;CL:0000393,1.73e-19,39;CL:0000211,1.73e-19,39;CL:0002321,2.23e-19,70;CL:0002609,6.71e-12,6;CL:0002453,2.50e-11,8;CL:0000333,8.95e-09,10;CL:0000095,8.95e-09,10;CL:0000243,8.95e-09,10;CL:0000123,8.95e-09,10;CL:0000125,8.95e-09,10;CL:0000030,8.95e-09,10;CL:0000339,8.95e-09,10;CL:0000723,2.45e-08,91;CL:0000048,2.45e-08,91;CL:0000128,3.86e-08,6;CL:0000126,3.86e-08,6;CL:0000127,3.86e-08,6;CL:0000034,2.20e-07,97;CL:0002608,8.99e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.05e-25!73;UBERON:0005743!2.05e-25!73;UBERON:0000073!3.39e-25!75;UBERON:0001016!3.39e-25!75;UBERON:0004121!3.31e-20!102;UBERON:0000924!3.31e-20!102;UBERON:0006601!3.31e-20!102;UBERON:0001049!3.21e-17!52;UBERON:0005068!3.21e-17!52;UBERON:0006241!3.21e-17!52;UBERON:0007135!3.21e-17!52;UBERON:0002616!3.02e-16!49;UBERON:0002346!3.42e-16!71;UBERON:0003075!3.42e-16!71;UBERON:0007284!3.42e-16!71;UBERON:0000955!1.88e-15!50;UBERON:0006238!1.88e-15!50;UBERON:0000033!8.77e-15!63;UBERON:0002020!3.04e-14!34;UBERON:0002780!9.28e-14!39;UBERON:0001890!9.28e-14!39;UBERON:0006240!9.28e-14!39;UBERON:0003080!1.06e-13!40;UBERON:0003056!2.38e-13!49;UBERON:0002791!1.14e-11!29;UBERON:0003528!1.14e-11!29;UBERON:0001893!1.14e-11!29;UBERON:0000956!7.09e-08!21;UBERON:0001869!7.09e-08!21;UBERON:0000203!7.09e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.38e-26,73;UBERON:0001016,3.17e-25,75;UBERON:0002020,3.94e-24,34;UBERON:0003528,5.21e-20,29;UBERON:0002791,5.21e-20,29;UBERON:0001893,5.21e-20,29;UBERON:0000073,1.23e-18,54;UBERON:0004121,9.12e-18,95;UBERON:0000924,9.12e-18,95;UBERON:0006601,9.12e-18,95;UBERON:0001049,1.77e-16,52;UBERON:0005068,1.77e-16,52;UBERON:0006241,1.77e-16,52;UBERON:0007135,1.77e-16,52;UBERON:0002780,5.55e-15,39;UBERON:0001890,5.55e-15,39;UBERON:0006240,5.55e-15,39;UBERON:0003080,1.84e-14,40;UBERON:0000956,3.62e-14,21;UBERON:0001869,3.62e-14,21;UBERON:0000203,3.62e-14,21;UBERON:0002616,2.19e-13,46;UBERON:0002346,3.83e-13,64;UBERON:0003075,3.83e-13,64;UBERON:0007284,3.83e-13,64;UBERON:0000955,5.68e-13,47;UBERON:0006238,5.68e-13,47;UBERON:0003056,9.45e-11,49;UBERON:0002619,1.15e-10,17;UBERON:0010371,1.23e-10,73;UBERON:0001954,2.03e-09,7;UBERON:0003022,2.03e-09,7;UBERON:0002421,2.03e-09,7;UBERON:0000349,2.03e-09,7;UBERON:0002600,2.03e-09,7;UBERON:0010314,1.09e-07,92;UBERON:0002420,4.92e-07,8;UBERON:0007245,4.92e-07,8;UBERON:0010009,4.92e-07,8;UBERON:0010011,4.92e-07,8;UBERON:0000454,4.92e-07,8 | |||
|phase1_expression=0.960893082628764,0.697950815278722,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.45881856213434,0,0.86152399231815,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.367093504323363,0.782391344348039,7.19483016055474,3.07560655828261,2.91644848611425,2.37976916763116,5.75010257459886,0,0,0,1.02903774414379,0,0,3.03474691289397,2.11596391708813,5.70448263155561,1.0165335962074,0,0,0,0,2.69640099466564,4.2264013585371,3.62913643079672,7.02030879324791,3.99617426567626,1.42825492201902,0.883474163806454,3.42974237801871,5.17565543498476,11.0306254393203,5.50579404996943,0.638436690425939,1.0752457327937,1.97829431595291,1.82975287204819,2.08365348222704,1.11673199600552,1.68828783009504,0.45839474333043,2.35702868378934,1.70846016958924,1.1183966749518,0.151452386666368,0.377857800533928,0.579728977403356,0,0,0,0,0,0,0.340860645156116,0.259786004602869,1.06001872353102,0.985903938436763,0,0,0,0.432982082022428,1.26679932737549,2.02209778005913,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.299581278809645,0.915001205637253,2.26177833803156,0.521472960576829,0,0.20778804455956,0.486723789203273,0.203678727700633,0,0,0.210441855886474,0.910843100738926,0.459804208866946,0.900310649026746,0.150704817835715,0.408218994907967,0.12811372028485,0.468508622798644,0,1.5089759505299,0.945530400839096,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0,0.995171334092466,0,0,0,0.621377317606506,0.234526059981096,0,0.946978942340841,0,0.308534225774757,0.697601834251224,0.268273401399619,0.700592054203017,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0,1.3377599609307,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0,0,0,0,0,0.251335208800269,0,0,0,0,0,1.32767530667157,0.456994050438915,1.1270773567308,0,0.387904974335251,0.280543279561274,0.0632365371242573,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,1.51593129416388,0.651859905768103,0.339490171550376,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0.481651769963376,0.234423373184406,0.655739781506702,0,0.631016438832513,1.17131623288992,0.646270193198397,0.716906393857656,0.222798674082394,1.13230612315533,0,0.876767573733936,1.18586333383957,0,0,0.35613120733451,0.162886959353576,0,0,1.21390318077491,0.604647113929502,0,0,0.307435147943927,0,0,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.36012218806262,0.646793418913773,0.857348140126369,0.886701168211368,0.713475270408282,0.658196082408484,1.522324745573,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.241251699712623,0,0.328281799490123,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0,0,0,0.169978429993855,0,0,0,1.58167996790568,0.609958401380546,0.216010681643603,0.418176592028937,0,0,0.0826534557253359,0,0,0,0,2.39226473670366,1.82004339502807,0,0.516639293910924,0.337912250981556,0.117357238645754,0.5208175393758,0.943734099831398,0.241584120826006,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0.116876902181569,0,0.665957860122194,0.179427713218951,0.335769232728157,0,0.375364950902364,0.183151624267265,0,0.501572104035363,0,0.460325236507177,0,1.89038500578056,1.37016503954128,1.5107877947794,0.675022500231806,1.80128481289688,2.71885445390523,0.51776031175182,1.14166082342594,0.798049746802062,1.19513524027894,0.243106717068294,0.628839487883947,0.183843508450014,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.655490552289177,0.640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0.685738504770831,0.177475806159338,0,0.436039249896986,0.846984423737976,0.338458431566706,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,1.24905288968973,0.701794825336225,0,0.191288332068843,0.441182838239031,0 | |phase1_expression=0.960893082628764,0.697950815278722,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.45881856213434,0,0.86152399231815,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.367093504323363,0.782391344348039,7.19483016055474,3.07560655828261,2.91644848611425,2.37976916763116,5.75010257459886,0,0,0,1.02903774414379,0,0,3.03474691289397,2.11596391708813,5.70448263155561,1.0165335962074,0,0,0,0,2.69640099466564,4.2264013585371,3.62913643079672,7.02030879324791,3.99617426567626,1.42825492201902,0.883474163806454,3.42974237801871,5.17565543498476,11.0306254393203,5.50579404996943,0.638436690425939,1.0752457327937,1.97829431595291,1.82975287204819,2.08365348222704,1.11673199600552,1.68828783009504,0.45839474333043,2.35702868378934,1.70846016958924,1.1183966749518,0.151452386666368,0.377857800533928,0.579728977403356,0,0,0,0,0,0,0.340860645156116,0.259786004602869,1.06001872353102,0.985903938436763,0,0,0,0.432982082022428,1.26679932737549,2.02209778005913,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.299581278809645,0.915001205637253,2.26177833803156,0.521472960576829,0,0.20778804455956,0.486723789203273,0.203678727700633,0,0,0.210441855886474,0.910843100738926,0.459804208866946,0.900310649026746,0.150704817835715,0.408218994907967,0.12811372028485,0.468508622798644,0,1.5089759505299,0.945530400839096,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0,0.995171334092466,0,0,0,0.621377317606506,0.234526059981096,0,0.946978942340841,0,0.308534225774757,0.697601834251224,0.268273401399619,0.700592054203017,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0,1.3377599609307,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0,0,0,0,0,0.251335208800269,0,0,0,0,0,1.32767530667157,0.456994050438915,1.1270773567308,0,0.387904974335251,0.280543279561274,0.0632365371242573,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,1.51593129416388,0.651859905768103,0.339490171550376,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0.481651769963376,0.234423373184406,0.655739781506702,0,0.631016438832513,1.17131623288992,0.646270193198397,0.716906393857656,0.222798674082394,1.13230612315533,0,0.876767573733936,1.18586333383957,0,0,0.35613120733451,0.162886959353576,0,0,1.21390318077491,0.604647113929502,0,0,0.307435147943927,0,0,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.36012218806262,0.646793418913773,0.857348140126369,0.886701168211368,0.713475270408282,0.658196082408484,1.522324745573,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.241251699712623,0,0.328281799490123,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0,0,0,0.169978429993855,0,0,0,1.58167996790568,0.609958401380546,0.216010681643603,0.418176592028937,0,0,0.0826534557253359,0,0,0,0,2.39226473670366,1.82004339502807,0,0.516639293910924,0.337912250981556,0.117357238645754,0.5208175393758,0.943734099831398,0.241584120826006,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0.116876902181569,0,0.665957860122194,0.179427713218951,0.335769232728157,0,0.375364950902364,0.183151624267265,0,0.501572104035363,0,0.460325236507177,0,1.89038500578056,1.37016503954128,1.5107877947794,0.675022500231806,1.80128481289688,2.71885445390523,0.51776031175182,1.14166082342594,0.798049746802062,1.19513524027894,0.243106717068294,0.628839487883947,0.183843508450014,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.655490552289177,0.640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0.685738504770831,0.177475806159338,0,0.436039249896986,0.846984423737976,0.338458431566706,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,1.24905288968973,0.701794825336225,0,0.191288332068843,0.441182838239031,0 | ||
|short_description=p8@Zfp428 | |short_description=p8@Zfp428 | ||
}} | }} |
Latest revision as of 09:36, 26 September 2015
Short description: | p8@Zfp428 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Zfp428_5end |
Coexpression cluster: | MCL_coexpression_mm9:1427 |
Association with transcript: | 12bp_to_ENSMUST00000071361, NM_146183, uc009fpt.2, uc009fpu.2_5end |
EntrezGene: | Zfp428 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.68e-30 | 43 |
ectodermal cell | 1.30e-29 | 44 |
neurectodermal cell | 1.30e-29 | 44 |
CNS neuron (sensu Vertebrata) | 1.23e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.23e-26 | 23 |
neuron | 2.44e-22 | 33 |
neuronal stem cell | 2.44e-22 | 33 |
neuroblast | 2.44e-22 | 33 |
electrically signaling cell | 2.44e-22 | 33 |
electrically responsive cell | 1.73e-19 | 39 |
electrically active cell | 1.73e-19 | 39 |
embryonic cell | 2.23e-19 | 70 |
neuron of cerebral cortex | 6.71e-12 | 6 |
oligodendrocyte precursor cell | 2.50e-11 | 8 |
migratory neural crest cell | 8.95e-09 | 10 |
neuron associated cell | 8.95e-09 | 10 |
glial cell (sensu Vertebrata) | 8.95e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 8.95e-09 | 10 |
glial cell | 8.95e-09 | 10 |
glioblast | 8.95e-09 | 10 |
glioblast (sensu Vertebrata) | 8.95e-09 | 10 |
somatic stem cell | 2.45e-08 | 91 |
multi fate stem cell | 2.45e-08 | 91 |
oligodendrocyte | 3.86e-08 | 6 |
macroglial cell | 3.86e-08 | 6 |
astrocyte | 3.86e-08 | 6 |
stem cell | 2.20e-07 | 97 |
hippocampal neuron | 8.99e-07 | 3 |