Personal tools

FFCP PHASE1:Mm9::chr7:64642542..64642592,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14407
|EntrezGene=14407
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=G5E8E8
|UniProt=G5E8E8
|association_with_transcript=0bp_to_ENSMUST00000068911,ENSMUST00000171965_5end
|association_with_transcript=0bp_to_ENSMUST00000068911,ENSMUST00000171965_5end
|cluster_id=chr7:64642542..64642592,-
|description=CAGE_peak_1_at_Gabrg3_5end
|description=CAGE_peak_1_at_Gabrg3_5end
|id=chr7:64642542..64642592,-
|id=chr7:64642542..64642592,-
|ontology_enrichment_celltype=CL:0000540!5.07e-11!33;CL:0000047!5.07e-11!33;CL:0000031!5.07e-11!33;CL:0000404!5.07e-11!33;CL:0000117!1.50e-10!23;CL:0000337!1.50e-10!23;CL:0000393!4.07e-07!39;CL:0000211!4.07e-07!39
|ontology_enrichment_celltype=CL:0000540!5.07e-11!33;CL:0000047!5.07e-11!33;CL:0000031!5.07e-11!33;CL:0000404!5.07e-11!33;CL:0000117!1.50e-10!23;CL:0000337!1.50e-10!23;CL:0000393!4.07e-07!39;CL:0000211!4.07e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,8.36e-12,23;CL:0000337,8.36e-12,23;CL:0000540,9.82e-11,33;CL:0000047,9.82e-11,33;CL:0000031,9.82e-11,33;CL:0000404,9.82e-11,33;CL:0000393,6.06e-08,39;CL:0000211,6.06e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.68e-23!71;UBERON:0003075!2.68e-23!71;UBERON:0007284!2.68e-23!71;UBERON:0004121!4.96e-21!102;UBERON:0000924!4.96e-21!102;UBERON:0006601!4.96e-21!102;UBERON:0001017!3.01e-20!73;UBERON:0005743!3.01e-20!73;UBERON:0000073!1.03e-19!75;UBERON:0001016!1.03e-19!75;UBERON:0001049!4.18e-17!52;UBERON:0005068!4.18e-17!52;UBERON:0006241!4.18e-17!52;UBERON:0007135!4.18e-17!52;UBERON:0000033!4.77e-17!63;UBERON:0003056!1.15e-16!49;UBERON:0000955!7.79e-16!50;UBERON:0006238!7.79e-16!50;UBERON:0002020!1.25e-15!34;UBERON:0002616!3.23e-15!49;UBERON:0003080!4.37e-14!40;UBERON:0002780!1.84e-13!39;UBERON:0001890!1.84e-13!39;UBERON:0006240!1.84e-13!39;UBERON:0002791!1.89e-12!29;UBERON:0003528!1.89e-12!29;UBERON:0001893!1.89e-12!29;UBERON:0002021!2.14e-08!10;UBERON:0000411!2.14e-08!10;UBERON:0001950!2.14e-08!10;UBERON:0000956!7.32e-08!21;UBERON:0001869!7.32e-08!21;UBERON:0000203!7.32e-08!21;UBERON:0002619!1.24e-07!17;UBERON:0000153!6.72e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.84e-22,64;UBERON:0003075,7.84e-22,64;UBERON:0007284,7.84e-22,64;UBERON:0001017,2.46e-21,73;UBERON:0000073,1.55e-20,54;UBERON:0001016,2.63e-20,75;UBERON:0002020,3.80e-20,34;UBERON:0001049,8.64e-19,52;UBERON:0005068,8.64e-19,52;UBERON:0006241,8.64e-19,52;UBERON:0007135,8.64e-19,52;UBERON:0004121,1.51e-17,95;UBERON:0000924,1.51e-17,95;UBERON:0006601,1.51e-17,95;UBERON:0010371,3.63e-17,73;UBERON:0003056,3.57e-16,49;UBERON:0010314,4.25e-16,92;UBERON:0003528,1.52e-15,29;UBERON:0002791,1.52e-15,29;UBERON:0001893,1.52e-15,29;UBERON:0003080,9.85e-15,40;UBERON:0000955,1.16e-14,47;UBERON:0006238,1.16e-14,47;UBERON:0002780,6.75e-14,39;UBERON:0001890,6.75e-14,39;UBERON:0006240,6.75e-14,39;UBERON:0002616,7.25e-14,46;UBERON:0002021,9.57e-12,10;UBERON:0000411,9.57e-12,10;UBERON:0001950,9.57e-12,10;UBERON:0002619,1.79e-10,17;UBERON:0000956,5.32e-09,21;UBERON:0001869,5.32e-09,21;UBERON:0000203,5.32e-09,21;UBERON:0002420,2.01e-08,8;UBERON:0007245,2.01e-08,8;UBERON:0010009,2.01e-08,8;UBERON:0010011,2.01e-08,8;UBERON:0000454,2.01e-08,8;UBERON:0002240,5.94e-07,6;UBERON:0005174,5.94e-07,6;UBERON:0001137,5.94e-07,6
|phase1_expression=0,0.348975407639361,0,0,0,0.671517087647559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0.319984845586813,0.22940928106717,0,0.86152399231815,1.07735616342945,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0.622137673850866,0.540023753326763,0.210324961351382,9.42648248532552,9.93908434282261,1.46988959057945,1.43768206527355,0.919218786610021,9.91042928994498,10.5980490610706,8.44835932909339,5.67111037239834,6.22115976496386,7.8137005583514,3.90856198601933,7.31591393041184,6.87592114995646,18.2669722993674,15.233769845504,6.89677949553612,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,1.03575153458869,1.03909497345377,1.21439728736295,3.04465478312141,1.15307748628029,1.3565037649736,1.76383060703557,2.38766523526383,0,0.289198713839823,0,0,0.441683036920787,0,0,0.878342391034642,0.209446706813455,0,0,0,0,11.9832511523858,32.4825428001225,16.9633375352367,14.2535942557667,16.3657892691412,13.5062228963714,17.3598151482501,0.712875546952214,0.124406970610093,0,0.631325567659422,0.520481771850815,0.919608417733892,1.80062129805349,1.9591626318643,1.63287597963187,2.17793324484245,2.71735001223214,3.62184719034622,0,0.567318240503458,0.879755620819744,1.09597866213787,1.39023624612799,0.348252166522167,0,0.796137067273973,0,0,0,0,0.234526059981096,0.540186184383045,0.473489471170421,0,0.617068451549513,0.232533944750408,1.07309360559848,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,10.0939175310781,4.73361216944708,0,0,0.426576501070468,0.464473343720877,0.644337306610467,0.201683524623343,0.444756087689741,0.760902504450237,0,0.494096864172033,0.502670417600539,0.397912944082302,0,0,0,0,0.569003702859245,0.342745537829186,0,0.610953983535943,0.387904974335251,0.701358198903186,1.3279672796094,0.147610147979602,0.627994911365499,0.123397163921801,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0,0.195133647857799,0.788175720530955,0.664394068946325,0.797273843287435,0,0,0,0,0,0.491764273019036,0,6.10092241953609,6.21221938938677,0,0,1.26203287766503,1.56175497718655,2.36965737506079,0.238968797952552,0.445597348164788,0.849229592366497,0.809621403349789,1.16902343164525,3.55759000151871,10.2822821254978,0.425820255624806,1.42452482933804,1.30309567482861,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.886701168211368,0.891844088010353,1.64549020602121,1.522324745573,0,0,0.220528398054962,0,0,0.0603129249281559,0.238744688006273,0,0.291480836629851,7.6024373824309,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,1.21991680276109,0.972048067396211,0.627264888043406,1.09181281873089,0.809186078308924,0.41326727862668,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0,0.419437377702843,0.483168241652012,0,0,0,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,26.5433366030021,25.3178880078947,22.9158205375759,16.497905504994,16.4419804744954,16.6186657425734,27.0009000092722,14.8605997063993,15.406841905463,9.83744592328458,0.31136204275253,0.399024873401031,0.853668028770671,1.70174701947806,0.628839487883947,1.83843508450014,2.889207461421,2.67845574410562,1.60459604795908,2.52697211763797,2.78827229879264,2.82939512079114,1.77918864192777,2.62503124859964,1.7230640686684,3.81034953026459,2.31768651889711,2.50781986602817,0.824171801606613,2.06078488188156,3.42869252385415,3.54951612318675,2.38436189947321,3.0522747492789,2.4468438907986,2.36920902096694,1.82927972872773,2.10455769150274,1.7654534799962,3.36685362994643,3.2031454893527,2.36410757701352,2.04615521584845,2.63392630016142,2.12197272079256,2.99772693525535,1.87145286756327,2.14871054048298,0.765153328275374,0.220591419119515,0.463735671240843
|phase1_expression=0,0.348975407639361,0,0,0,0.671517087647559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0.319984845586813,0.22940928106717,0,0.86152399231815,1.07735616342945,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0.622137673850866,0.540023753326763,0.210324961351382,9.42648248532552,9.93908434282261,1.46988959057945,1.43768206527355,0.919218786610021,9.91042928994498,10.5980490610706,8.44835932909339,5.67111037239834,6.22115976496386,7.8137005583514,3.90856198601933,7.31591393041184,6.87592114995646,18.2669722993674,15.233769845504,6.89677949553612,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,1.03575153458869,1.03909497345377,1.21439728736295,3.04465478312141,1.15307748628029,1.3565037649736,1.76383060703557,2.38766523526383,0,0.289198713839823,0,0,0.441683036920787,0,0,0.878342391034642,0.209446706813455,0,0,0,0,11.9832511523858,32.4825428001225,16.9633375352367,14.2535942557667,16.3657892691412,13.5062228963714,17.3598151482501,0.712875546952214,0.124406970610093,0,0.631325567659422,0.520481771850815,0.919608417733892,1.80062129805349,1.9591626318643,1.63287597963187,2.17793324484245,2.71735001223214,3.62184719034622,0,0.567318240503458,0.879755620819744,1.09597866213787,1.39023624612799,0.348252166522167,0,0.796137067273973,0,0,0,0,0.234526059981096,0.540186184383045,0.473489471170421,0,0.617068451549513,0.232533944750408,1.07309360559848,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,10.0939175310781,4.73361216944708,0,0,0.426576501070468,0.464473343720877,0.644337306610467,0.201683524623343,0.444756087689741,0.760902504450237,0,0.494096864172033,0.502670417600539,0.397912944082302,0,0,0,0,0.569003702859245,0.342745537829186,0,0.610953983535943,0.387904974335251,0.701358198903186,1.3279672796094,0.147610147979602,0.627994911365499,0.123397163921801,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0,0.195133647857799,0.788175720530955,0.664394068946325,0.797273843287435,0,0,0,0,0,0.491764273019036,0,6.10092241953609,6.21221938938677,0,0,1.26203287766503,1.56175497718655,2.36965737506079,0.238968797952552,0.445597348164788,0.849229592366497,0.809621403349789,1.16902343164525,3.55759000151871,10.2822821254978,0.425820255624806,1.42452482933804,1.30309567482861,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.886701168211368,0.891844088010353,1.64549020602121,1.522324745573,0,0,0.220528398054962,0,0,0.0603129249281559,0.238744688006273,0,0.291480836629851,7.6024373824309,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,1.21991680276109,0.972048067396211,0.627264888043406,1.09181281873089,0.809186078308924,0.41326727862668,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0,0.419437377702843,0.483168241652012,0,0,0,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,26.5433366030021,25.3178880078947,22.9158205375759,16.497905504994,16.4419804744954,16.6186657425734,27.0009000092722,14.8605997063993,15.406841905463,9.83744592328458,0.31136204275253,0.399024873401031,0.853668028770671,1.70174701947806,0.628839487883947,1.83843508450014,2.889207461421,2.67845574410562,1.60459604795908,2.52697211763797,2.78827229879264,2.82939512079114,1.77918864192777,2.62503124859964,1.7230640686684,3.81034953026459,2.31768651889711,2.50781986602817,0.824171801606613,2.06078488188156,3.42869252385415,3.54951612318675,2.38436189947321,3.0522747492789,2.4468438907986,2.36920902096694,1.82927972872773,2.10455769150274,1.7654534799962,3.36685362994643,3.2031454893527,2.36410757701352,2.04615521584845,2.63392630016142,2.12197272079256,2.99772693525535,1.87145286756327,2.14871054048298,0.765153328275374,0.220591419119515,0.463735671240843
|short_description=p1@Gabrg3
|short_description=p1@Gabrg3
}}
}}

Latest revision as of 23:50, 26 September 2015

Short description:p1@Gabrg3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gabrg3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000068911, ENSMUST00000171965_5end
EntrezGene:Gabrg3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gabrg3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.94
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.90
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.98
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F116.96
cortex, adult.CNhs10473.12-14D514.25
cortex, neonate N30.CNhs11107.1392-42F216.37
diencephalon, adult.CNhs10482.20-12F213.51
diencephalon, neonate N30.CNhs11201.1388-42B217.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G14.73
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.10
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A126.54
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.32
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.36e-1223
neuroblast (sensu Vertebrata)8.36e-1223
neuron9.82e-1133
neuronal stem cell9.82e-1133
neuroblast9.82e-1133
electrically signaling cell9.82e-1133
electrically responsive cell6.06e-0839
electrically active cell6.06e-0839

Uber anatomy
Ontology termp-valuen
neurectoderm7.84e-2264
neural plate7.84e-2264
presumptive neural plate7.84e-2264
central nervous system2.46e-2173
regional part of nervous system1.55e-2054
nervous system2.63e-2075
gray matter3.80e-2034
neural tube8.64e-1952
neural rod8.64e-1952
future spinal cord8.64e-1952
neural keel8.64e-1952
ectoderm-derived structure1.51e-1795
ectoderm1.51e-1795
presumptive ectoderm1.51e-1795
ecto-epithelium3.63e-1773
pre-chordal neural plate3.57e-1649
structure with developmental contribution from neural crest4.25e-1692
brain grey matter1.52e-1529
regional part of telencephalon1.52e-1529
telencephalon1.52e-1529
anterior neural tube9.85e-1540
brain1.16e-1447
future brain1.16e-1447
regional part of forebrain6.75e-1439
forebrain6.75e-1439
future forebrain6.75e-1439
regional part of brain7.25e-1446
occipital lobe9.57e-1210
visual cortex9.57e-1210
neocortex9.57e-1210
regional part of cerebral cortex1.79e-1017
cerebral cortex5.32e-0921
cerebral hemisphere5.32e-0921
pallium5.32e-0921
basal ganglion2.01e-088
nuclear complex of neuraxis2.01e-088
aggregate regional part of brain2.01e-088
collection of basal ganglia2.01e-088
cerebral subcortex2.01e-088
spinal cord5.94e-076
dorsal region element5.94e-076
dorsum5.94e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:64642542..64642592,-&oldid=4281218"