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FFCP PHASE1:Mm9::chr7:74367460..74367521,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=75099
|EntrezGene=75099
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q8CC84
|UniProt=Q8CC84
|association_with_transcript=0bp_to_ENSMUST00000058771,NM_001191051,uc009hic.2,uc009hid.2_5end
|association_with_transcript=0bp_to_ENSMUST00000058771,NM_001191051,uc009hic.2,uc009hid.2_5end
|cluster_id=chr7:74367460..74367521,+
|description=CAGE_peak_1_at_Lysmd4_5end
|description=CAGE_peak_1_at_Lysmd4_5end
|id=chr7:74367460..74367521,+
|id=chr7:74367460..74367521,+
|ontology_enrichment_celltype=CL:0000117!1.18e-13!23;CL:0000337!1.18e-13!23;CL:0000540!6.35e-08!33;CL:0000047!6.35e-08!33;CL:0000031!6.35e-08!33;CL:0000404!6.35e-08!33
|ontology_enrichment_celltype=CL:0000117!1.18e-13!23;CL:0000337!1.18e-13!23;CL:0000540!6.35e-08!33;CL:0000047!6.35e-08!33;CL:0000031!6.35e-08!33;CL:0000404!6.35e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.17e-13,23;CL:0000337,1.17e-13,23;CL:0000540,6.34e-08,33;CL:0000047,6.34e-08,33;CL:0000031,6.34e-08,33;CL:0000404,6.34e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.46e-20!52;UBERON:0005068!1.46e-20!52;UBERON:0006241!1.46e-20!52;UBERON:0007135!1.46e-20!52;UBERON:0000955!7.65e-20!50;UBERON:0006238!7.65e-20!50;UBERON:0002616!3.21e-19!49;UBERON:0001017!4.97e-19!73;UBERON:0005743!4.97e-19!73;UBERON:0000033!1.37e-18!63;UBERON:0000073!1.20e-17!75;UBERON:0001016!1.20e-17!75;UBERON:0002020!1.91e-17!34;UBERON:0003080!1.67e-16!40;UBERON:0002346!3.27e-16!71;UBERON:0003075!3.27e-16!71;UBERON:0007284!3.27e-16!71;UBERON:0003056!5.46e-16!49;UBERON:0002780!5.85e-16!39;UBERON:0001890!5.85e-16!39;UBERON:0006240!5.85e-16!39;UBERON:0004121!1.06e-14!102;UBERON:0000924!1.06e-14!102;UBERON:0006601!1.06e-14!102;UBERON:0002791!1.32e-14!29;UBERON:0003528!1.32e-14!29;UBERON:0001893!1.32e-14!29;UBERON:0000956!3.53e-10!21;UBERON:0001869!3.53e-10!21;UBERON:0000203!3.53e-10!21;UBERON:0000025!7.53e-10!114;UBERON:0004111!1.61e-09!122;UBERON:0002619!2.76e-08!17;UBERON:0002021!6.70e-07!10;UBERON:0000411!6.70e-07!10;UBERON:0001950!6.70e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.49e-22,54;UBERON:0001049,1.51e-20,52;UBERON:0005068,1.51e-20,52;UBERON:0006241,1.51e-20,52;UBERON:0007135,1.51e-20,52;UBERON:0001017,5.12e-19,73;UBERON:0002346,1.12e-18,64;UBERON:0003075,1.12e-18,64;UBERON:0007284,1.12e-18,64;UBERON:0010314,7.49e-18,92;UBERON:0000955,9.14e-18,47;UBERON:0006238,9.14e-18,47;UBERON:0001016,1.23e-17,75;UBERON:0002020,1.91e-17,34;UBERON:0002616,3.69e-17,46;UBERON:0010371,6.44e-17,73;UBERON:0003080,1.67e-16,40;UBERON:0004121,2.58e-16,95;UBERON:0000924,2.58e-16,95;UBERON:0006601,2.58e-16,95;UBERON:0003056,5.45e-16,49;UBERON:0002780,5.84e-16,39;UBERON:0001890,5.84e-16,39;UBERON:0006240,5.84e-16,39;UBERON:0003528,1.32e-14,29;UBERON:0002791,1.32e-14,29;UBERON:0001893,1.32e-14,29;UBERON:0000956,3.53e-10,21;UBERON:0001869,3.53e-10,21;UBERON:0000203,3.53e-10,21;UBERON:0000025,7.66e-10,114;UBERON:0004111,1.63e-09,122;UBERON:0002619,2.75e-08,17;UBERON:0002021,6.69e-07,10;UBERON:0000411,6.69e-07,10;UBERON:0001950,6.69e-07,10
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1623837,5.20716771069616,6.54389854960074,4.27729411862916,3.72803587852155,10.7101658349996,3.13984746692355,4.46737924234164,3.88902376688095,4.26227417476513,5.23763989021412,6.80671984145373,4.1665403150064,4.29923312145414,7.73069186643219,7.77681016896237,0.948033361884535,4.05450430580328,3.28675062927447,1.94881234466693,1.07416017400489,3.3775830312815,2.16351809135944,2.21534290761866,3.23092639834072,2.209997392995,1.91569751759997,1.55932609183604,2.02044867444692,3.27255326108393,4.0811469050738,3.32978930061097,1.43542170575161,1.67884616364078,3.47741269257943,3.94133198447482,3.47988086107804,5.78794623513478,5.517293144389,15.8130515932779,15.1907328047368,14.8952833494243,13.748254587495,12.3314853558716,14.3524840504043,12.8254275044043,12.6089936902782,7.25027854374727,12.9440077937955,3.32119512269365,4.38927360741134,7.0000778359195,3.8897074730927,4.82110274044359,5.1476182366004,4.22268782823069,3.5025959730612,4.49286893428541,6.31743029409494,4.30914809813408,4.14977951049368,5.05664140337365,6.08238947846258,5.05432126809397,3.81034953026459,5.2147946675185,5.01563973205633,4.53294490883637,6.32955356577908,5.82877729055206,4.61437096014278,4.5302876089991,5.0871245821315,4.6113596403512,4.65380343404221,5.48783918618318,5.5244639401947,5.16055632614275,2.24456908663095,5.33857581558784,5.81176446015824,7.36615877705441,4.64810523557898,3.85813221962283,5.24602213669686,6.78401664491684,5.80151845930405,4.97349663378993,5.07360263974886,5.56482805489012
|phase1_expression=6.56610273129655,9.42233600626275,11.3749809847384,16.6355316218757,15.0268718983904,3.52546471014969,5.37309073369709,1.29123323441576,0.140788722151667,0.234064526321993,1.71217968225505,1.7549874978974,2.9104124088305,1.39872643870396,0.999329285446988,1.21485160433896,1.39912375625629,2.05050407482854,3.42786084014347,1.69755860719212,6.54833334163237,0,0,4.31979541542198,4.12936705920906,8.6134794617253,6.03066794622705,7.75696437669201,7.60093677825496,6.80481350351813,6.43018480900384,3.17515336729816,2.46025915033828,0,1.1554064790051,2.32728503501889,1.22501613757421,1.25559489221072,1.5626706890476,2.09409497589519,0.588231488031014,2.04913645487534,1.45653105909346,4.40638862914521,3.04130793658544,2.9367480345869,0.782391344348039,4.57852828398938,3.95435128922049,4.86074747685709,5.17949760013841,2.87505128729943,1.17447824240415,3.62681071005672,1.68046899571232,2.82985379639542,5.44413535883638,6.18806510732931,10.5204559646991,12.6957835025288,13.9442908771359,2.71075625655306,4.4464739805557,1.7997994345628,4.94433181283487,3.5524005747305,5.39280198933128,4.99483796918021,10.5763404554647,9.99043943654511,11.567872874326,14.568200204594,13.9147180799517,9.30930074033651,9.68039257284187,11.0306254393203,18.7196997698961,17.2377906415003,14.2854075928306,11.3422207447967,13.3571959659518,10.4182674111352,23.1721889171146,23.0732670112989,16.0438160165651,12.6690291753677,12.1015928679237,11.183966749518,2.65041676666144,2.56943304363071,5.2175607966302,4.30211938490693,2.719885334831,2.69851595818909,1.94932925234301,4.92829575807069,4.49422144421606,2.72688516124892,1.81850203222008,3.18005617059306,4.50698943285378,5.13305909657271,5.09610479413291,0,1.94841936910093,2.02687892380079,1.01104889002957,4.79572294820052,2.58937883647172,2.52351636410202,4.8575891494518,4.87144765299426,4.61230994512117,3.61734337326294,3.64524992120685,3.51866455723091,8.15743393523434,4.04878199375753,7.07688441559899,5.66183974815932,3.97514733228708,3.87900202508178,1.86391761218122,13.1751358655196,12.7762491156208,7.66371165625774,0.838705871541442,0,1.27070227073065,12.5824137100051,10.0650132620098,10.5549655774806,13.3844726548053,16.6215047264715,13.5062228963714,14.9261962022337,5.49932564791708,4.35424397135326,5.55990068554084,3.36706969418358,3.77349284591841,3.44853156650209,5.22180176435513,6.32960234910003,7.34794190834341,7.81493693737584,7.58983968933804,5.95017752699736,4.095791865724,5.67318240503458,6.862093842394,5.04150184583422,5.00485048606076,2.78601733217733,3.90986059175093,5.37392520409932,0.702213187313235,1.28673953557358,0.852490498186778,3.72826390563903,2.81431271977315,5.58192390529146,3.78791576936336,7.67380503814875,4.62801338662135,7.20855228726264,6.43856163359086,6.42209383019432,6.58239399653922,6.23836363500562,8.10688095458557,7.45619935869195,5.92785311285837,8.05238512562231,14.930586348053,12.7601719350313,12.2254949704005,4.49565963328025,3.62590025909898,5.34144345279009,3.60828891701861,3.42861991859682,2.66853652613844,4.1849637744763,7.11793592316767,4.44687177754829,6.03204501120647,4.17808591286417,3.70431765526328,4.49409704327111,5.18731319699266,6.57166201739412,5.50036912763937,5.1411830674378,5.63538678365402,3.86937522906097,6.40043207653165,4.20814919341911,6.13394410105296,5.31396532726568,6.43694784149637,5.79966670432462,4.44678940630723,1.50160595144485,1.57247196090562,1.79889689907883,1.82574109249653,2.17059443777175,1.78238096246994,3.16465751195892,4.70192157647603,3.0201755450689,7.18841032636773,4.09355042435354,4.68056509671841,3.78868316920668,4.84373016509163,7.71909634181387,2.77129785249907,4.16881105895066,4.07412441105065,3.56464680127895,5.16318546234705,5.69521275302174,3.57065461329021,3.31727201358258,3.78324345854858,3.5434350343804,6.05928120898451,3.93271955317771,3.45369963731791,3.47157740595628,3.01582567878545,0,4.42587845717133,2.20749397043786,12.0412942490844,11.8383803458125,5.08198330667694,5.80683132570058,4.10160685241134,1.95219372148319,4.52389135238878,1.91175038362042,5.12436950389506,3.11384183867716,1.61924280669958,4.09158201075837,2.76701444562566,13.4954952897159,4.5420827266646,5.52003371368491,7.32991317091092,3.62934270539578,1.32745138339963,2.91336763385978,4.53485335447127,4.33791683438566,1.18120757152309,4.30409207121498,3.6179961043551,3.63533729477506,3.20847640546249,6.95280867458795,9.48767477174989,2.06271086496374,4.42571487479924,4.14140516272013,6.72665155670323,5.78709994585299,5.67488747655275,6.24290861607247,7.56925494769756,6.39376393140658,2.11204537257339,6.99045833850607,3.30792597082443,5.11147384118588,3.55221738730992,4.88534691918062,4.41677672811605,4.92422699235184,7.57850175237612,10.3838169125885,3.2465467351592,4.95328483111734,2.96311243791539,1.50694765603753,1.6403307326523,1.37266903923914,2.88963330989554,2.51912614182584,1.65839968565309,3.81868247206045,4.11236791655476,5.28630614529807,4.21220829205025,5.85447228840512,5.02233896616208,4.98998081623837,5.20716771069616,6.54389854960074,4.27729411862916,3.72803587852155,10.7101658349996,3.13984746692355,4.46737924234164,3.88902376688095,4.26227417476513,5.23763989021412,6.80671984145373,4.1665403150064,4.29923312145414,7.73069186643219,7.77681016896237,0.948033361884535,4.05450430580328,3.28675062927447,1.94881234466693,1.07416017400489,3.3775830312815,2.16351809135944,2.21534290761866,3.23092639834072,2.209997392995,1.91569751759997,1.55932609183604,2.02044867444692,3.27255326108393,4.0811469050738,3.32978930061097,1.43542170575161,1.67884616364078,3.47741269257943,3.94133198447482,3.47988086107804,5.78794623513478,5.517293144389,15.8130515932779,15.1907328047368,14.8952833494243,13.748254587495,12.3314853558716,14.3524840504043,12.8254275044043,12.6089936902782,7.25027854374727,12.9440077937955,3.32119512269365,4.38927360741134,7.0000778359195,3.8897074730927,4.82110274044359,5.1476182366004,4.22268782823069,3.5025959730612,4.49286893428541,6.31743029409494,4.30914809813408,4.14977951049368,5.05664140337365,6.08238947846258,5.05432126809397,3.81034953026459,5.2147946675185,5.01563973205633,4.53294490883637,6.32955356577908,5.82877729055206,4.61437096014278,4.5302876089991,5.0871245821315,4.6113596403512,4.65380343404221,5.48783918618318,5.5244639401947,5.16055632614275,2.24456908663095,5.33857581558784,5.81176446015824,7.36615877705441,4.64810523557898,3.85813221962283,5.24602213669686,6.78401664491684,5.80151845930405,4.97349663378993,5.07360263974886,5.56482805489012
|short_description=p1@Lysmd4
|short_description=p1@Lysmd4
}}
}}

Latest revision as of 01:04, 27 September 2015

Short description:p1@Lysmd4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lysmd4_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000058771, NM_001191051, uc009hic.2, uc009hid.2_5end
EntrezGene:Lysmd4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Lysmd4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.64
CD326+ enterocyte, pool2.CNhs13197.11849-124I415.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.43
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H98.61
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I27.76
Ileum epithelium, pool1.CNhs13199.10252-104B97.60
Ileum epithelium, pool2.CNhs13232.10253-104C16.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C310.52
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.58
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.91
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.34
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.36
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.18
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F92.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I33.52
amnion, adult pregnant day17.5.CNhs10488.583-22A88.16
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F55.66
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H77.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A412.58
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F110.55
cortex, adult.CNhs10473.12-14D513.38
cortex, neonate N30.CNhs11107.1392-42F216.62
diencephalon, adult.CNhs10482.20-12F213.51
diencephalon, neonate N30.CNhs11201.1388-42B214.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.35
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D46.33
eyeball, neonate N00.CNhs11207.633-15C67.35
eyeball, neonate N01.CNhs11140.1532-43E77.81
eyeball, neonate N02.CNhs11205.1551-44G87.59
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E26.86
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I65.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C64.63
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E36.42
heart, neonate N03.CNhs11221.1349-25I26.58
heart, neonate N10.CNhs11118.749-24G16.24
heart, neonate N16.CNhs11209.782-15G18.11
heart, neonate N20.CNhs11127.821-26I67.46
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D28.05
hippocampus, adult.CNhs10478.13-16E814.93
hippocampus, neonate N00.CNhs11228.627-43G112.76
intestinal mucosa, adult.CNhs10506.860-29I312.23
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G16.57
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F85.14
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G74.21
kidney, neonate N10.CNhs11206.758-6D56.13
kidney, neonate N20.CNhs11113.832-19I15.31
kidney, neonate N25.CNhs11122.1353-25F36.44
kidney, neonate N30.CNhs11203.1385-42H15.80
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F44.70
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C53.56
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A65.70
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E53.78
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E66.06
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C212.04
medulla oblongata, neonate N30.CNhs11200.1396-42A311.84
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I47.33
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E54.34
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C76.73
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F66.24
pituitary gland, embryo E17.CNhs11039.1265-44F57.57
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C35.11
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H34.89
skin, neonate N06.CNhs11097.693-20I54.42
skin, neonate N10.CNhs11108.762-6C44.92
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C910.38
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B84.99
stomach, neonate N07.CNhs11210.718-18A95.21
stomach, neonate N25.CNhs11104.1355-25E46.54
stomach, neonate N30.CNhs11134.1386-42I14.28
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G510.71
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I54.26
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B76.81
testis, neonate N07.CNhs11222.726-26I44.17
testis, neonate N10.CNhs11204.763-44D94.30
testis, neonate N20.CNhs11110.839-18H37.73
testis, neonate N30.CNhs11130.1391-42E27.78
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I23.29
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C43.23
thymus, neonate N07.CNhs11211.713-19D32.21
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E43.48
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I83.32
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F25.15
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B45.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.17e-1323
neuroblast (sensu Vertebrata)1.17e-1323
neuron6.34e-0833
neuronal stem cell6.34e-0833
neuroblast6.34e-0833
electrically signaling cell6.34e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.49e-2254
neural tube1.51e-2052
neural rod1.51e-2052
future spinal cord1.51e-2052
neural keel1.51e-2052
central nervous system5.12e-1973
neurectoderm1.12e-1864
neural plate1.12e-1864
presumptive neural plate1.12e-1864
structure with developmental contribution from neural crest7.49e-1892
brain9.14e-1847
future brain9.14e-1847
nervous system1.23e-1775
gray matter1.91e-1734
regional part of brain3.69e-1746
ecto-epithelium6.44e-1773
anterior neural tube1.67e-1640
ectoderm-derived structure2.58e-1695
ectoderm2.58e-1695
presumptive ectoderm2.58e-1695
pre-chordal neural plate5.45e-1649
regional part of forebrain5.84e-1639
forebrain5.84e-1639
future forebrain5.84e-1639
brain grey matter1.32e-1429
regional part of telencephalon1.32e-1429
telencephalon1.32e-1429
cerebral cortex3.53e-1021
cerebral hemisphere3.53e-1021
pallium3.53e-1021
tube7.66e-10114
anatomical conduit1.63e-09122
regional part of cerebral cortex2.75e-0817
occipital lobe6.69e-0710
visual cortex6.69e-0710
neocortex6.69e-0710
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