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FFCP PHASE1:Mm9::chr3:55849731..55849735,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=2125
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr3:55849731..55849735,-
|description=CAGE_peak_at_chr3:55849731..55849735,-
|description=CAGE_peak_at_chr3:55849731..55849735,-
|id=chr3:55849731..55849735,-
|id=chr3:55849731..55849735,-
|ontology_enrichment_celltype=CL:0000540!1.29e-26!33;CL:0000047!1.29e-26!33;CL:0000031!1.29e-26!33;CL:0000404!1.29e-26!33;CL:0000221!7.91e-23!44;CL:0000133!7.91e-23!44;CL:0000393!9.63e-23!39;CL:0000211!9.63e-23!39;CL:0002319!2.05e-22!43;CL:0000055!4.15e-19!50;CL:0000117!2.68e-18!23;CL:0000337!2.68e-18!23;CL:0002321!9.16e-10!70;CL:0000220!9.16e-10!70;CL:0000107!1.11e-08!9
|ontology_enrichment_celltype=CL:0000540!1.29e-26!33;CL:0000047!1.29e-26!33;CL:0000031!1.29e-26!33;CL:0000404!1.29e-26!33;CL:0000221!7.91e-23!44;CL:0000133!7.91e-23!44;CL:0000393!9.63e-23!39;CL:0000211!9.63e-23!39;CL:0002319!2.05e-22!43;CL:0000055!4.15e-19!50;CL:0000117!2.68e-18!23;CL:0000337!2.68e-18!23;CL:0002321!9.16e-10!70;CL:0000220!9.16e-10!70;CL:0000107!1.11e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000540,1.38e-50,33;CL:0000047,1.38e-50,33;CL:0000031,1.38e-50,33;CL:0000404,1.38e-50,33;CL:0000393,6.42e-46,39;CL:0000211,6.42e-46,39;CL:0002319,7.21e-38,43;CL:0000221,6.49e-37,44;CL:0000133,6.49e-37,44;CL:0000117,1.87e-34,23;CL:0000337,1.87e-34,23;CL:0002321,1.05e-23,70;CL:0000107,3.69e-18,9;CL:0000723,3.12e-17,91;CL:0000048,3.12e-17,91;CL:0000034,6.80e-16,97;CL:0002612,5.09e-11,3;CL:0002610,8.72e-11,3;CL:0000120,4.22e-10,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.02e-27!102;UBERON:0000924!5.02e-27!102;UBERON:0006601!5.02e-27!102;UBERON:0000073!8.61e-25!75;UBERON:0001016!8.61e-25!75;UBERON:0001017!4.13e-24!73;UBERON:0005743!4.13e-24!73;UBERON:0002346!1.46e-17!71;UBERON:0003075!1.46e-17!71;UBERON:0007284!1.46e-17!71;UBERON:0002020!1.48e-16!34;UBERON:0000033!6.11e-15!63;UBERON:0001049!5.39e-13!52;UBERON:0005068!5.39e-13!52;UBERON:0006241!5.39e-13!52;UBERON:0007135!5.39e-13!52;UBERON:0000955!6.20e-13!50;UBERON:0006238!6.20e-13!50;UBERON:0002791!7.18e-13!29;UBERON:0003528!7.18e-13!29;UBERON:0001893!7.18e-13!29;UBERON:0002616!2.29e-12!49;UBERON:0003056!3.19e-11!49;UBERON:0003080!3.06e-09!40;UBERON:0000010!6.57e-09!11;UBERON:0002780!8.83e-09!39;UBERON:0001890!8.83e-09!39;UBERON:0006240!8.83e-09!39;UBERON:0002410!1.11e-08!9;UBERON:0000956!5.70e-08!21;UBERON:0001869!5.70e-08!21;UBERON:0000203!5.70e-08!21;UBERON:0007811!3.83e-07!86;UBERON:0002619!9.78e-07!17
|ontology_enrichment_uberon=UBERON:0004121!5.02e-27!102;UBERON:0000924!5.02e-27!102;UBERON:0006601!5.02e-27!102;UBERON:0000073!8.61e-25!75;UBERON:0001016!8.61e-25!75;UBERON:0001017!4.13e-24!73;UBERON:0005743!4.13e-24!73;UBERON:0002346!1.46e-17!71;UBERON:0003075!1.46e-17!71;UBERON:0007284!1.46e-17!71;UBERON:0002020!1.48e-16!34;UBERON:0000033!6.11e-15!63;UBERON:0001049!5.39e-13!52;UBERON:0005068!5.39e-13!52;UBERON:0006241!5.39e-13!52;UBERON:0007135!5.39e-13!52;UBERON:0000955!6.20e-13!50;UBERON:0006238!6.20e-13!50;UBERON:0002791!7.18e-13!29;UBERON:0003528!7.18e-13!29;UBERON:0001893!7.18e-13!29;UBERON:0002616!2.29e-12!49;UBERON:0003056!3.19e-11!49;UBERON:0003080!3.06e-09!40;UBERON:0000010!6.57e-09!11;UBERON:0002780!8.83e-09!39;UBERON:0001890!8.83e-09!39;UBERON:0006240!8.83e-09!39;UBERON:0002410!1.11e-08!9;UBERON:0000956!5.70e-08!21;UBERON:0001869!5.70e-08!21;UBERON:0000203!5.70e-08!21;UBERON:0007811!3.83e-07!86;UBERON:0002619!9.78e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.78e-27,73;UBERON:0001016,3.29e-26,75;UBERON:0004121,9.25e-20,95;UBERON:0000924,9.25e-20,95;UBERON:0006601,9.25e-20,95;UBERON:0002410,3.69e-18,9;UBERON:0000010,1.08e-14,11;UBERON:0002020,2.98e-14,34;UBERON:0000073,7.73e-13,54;UBERON:0010313,4.04e-11,3;UBERON:0002342,4.04e-11,3;UBERON:0002005,4.04e-11,3;UBERON:0005428,4.04e-11,3;UBERON:0005062,4.04e-11,3;UBERON:0002257,5.09e-11,3;UBERON:0001948,5.89e-11,5;UBERON:0002315,5.89e-11,5;UBERON:0004684,8.72e-11,3;UBERON:0002275,8.72e-11,3;UBERON:0002346,2.07e-10,64;UBERON:0003075,2.07e-10,64;UBERON:0007284,2.07e-10,64;UBERON:0002240,3.82e-09,6;UBERON:0005174,3.82e-09,6;UBERON:0001137,3.82e-09,6;UBERON:0010371,9.83e-09,73;UBERON:0001049,1.89e-08,52;UBERON:0005068,1.89e-08,52;UBERON:0006241,1.89e-08,52;UBERON:0007135,1.89e-08,52;UBERON:0003528,5.51e-08,29;UBERON:0002791,5.51e-08,29;UBERON:0001893,5.51e-08,29;UBERON:0011216,2.64e-07,194;UBERON:0010314,3.20e-07,92;UBERON:0002420,5.34e-07,8;UBERON:0007245,5.34e-07,8;UBERON:0010009,5.34e-07,8;UBERON:0010011,5.34e-07,8;UBERON:0000454,5.34e-07,8
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,1.02903774414379,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0,2.28117147078651,0.405017814995072,2.10324961351382,1.14260393761521,0.441737081903227,1.95985278743926,0.479227355091182,0.919218786610021,5.50579404996943,1.27687338085188,1.84327839907492,0.395658863190582,0.457438218012048,1.56274011167028,0.558365998002762,5.06486349028512,3.97275444219706,5.00868595305235,5.97961059356232,1.1183966749518,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,1.37250180845588,0.251308704225729,0,0.511430914660661,0,0,0.101839363850316,0.124406970610093,0.758168275301024,0.210441855886474,0.390361328888111,0.229902104433473,0,0.150704817835715,0.204109497453984,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.393528463494808,0,0.465067889500816,0,0.116765342367169,0.16455984991348,0.32833492815819,0,0.146199987425332,0,0,0.420579897128254,0.102904612379284,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0.252470927204373,5.67914794949262,3.12350995437311,1.50796378412959,0.955875191810208,1.78238939265915,1.69845918473299,4.04810701674894,2.92255857911312,0.790575555893047,0.642642632843614,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0,0,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.358117032009409,0.492422699235184,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0.404593039154462,0,0,0,0,0,0,0.165458490457098,0,0.258319646955462,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0.501572104035363,0.564751842617067,0.920650473014354,0,0.68741272937475,0.685082519770642,0,1.35004500046361,0.900642406448441,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0.64183841918363,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.145346416632329,0.470546902076653,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,1.02903774414379,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0,2.28117147078651,0.405017814995072,2.10324961351382,1.14260393761521,0.441737081903227,1.95985278743926,0.479227355091182,0.919218786610021,5.50579404996943,1.27687338085188,1.84327839907492,0.395658863190582,0.457438218012048,1.56274011167028,0.558365998002762,5.06486349028512,3.97275444219706,5.00868595305235,5.97961059356232,1.1183966749518,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,1.37250180845588,0.251308704225729,0,0.511430914660661,0,0,0.101839363850316,0.124406970610093,0.758168275301024,0.210441855886474,0.390361328888111,0.229902104433473,0,0.150704817835715,0.204109497453984,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.393528463494808,0,0.465067889500816,0,0.116765342367169,0.16455984991348,0.32833492815819,0,0.146199987425332,0,0,0.420579897128254,0.102904612379284,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0.252470927204373,5.67914794949262,3.12350995437311,1.50796378412959,0.955875191810208,1.78238939265915,1.69845918473299,4.04810701674894,2.92255857911312,0.790575555893047,0.642642632843614,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0,0,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.358117032009409,0.492422699235184,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0.404593039154462,0,0,0,0,0,0,0.165458490457098,0,0.258319646955462,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0.501572104035363,0.564751842617067,0.920650473014354,0,0.68741272937475,0.685082519770642,0,1.35004500046361,0.900642406448441,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0.64183841918363,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.145346416632329,0.470546902076653,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0
|short_description=p@chr3:55849731..55849735,-
|short_description=p@chr3:55849731..55849735,-
}}
}}

Latest revision as of 21:19, 3 August 2015

Short description:p@chr3:55849731..55849735, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr3:55849731..55849735, -
Coexpression cluster:MCL_coexpression_mm9:2125
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr3:55849731..55849735-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system4.78e-2773
nervous system3.29e-2675
ectoderm-derived structure9.25e-2095
ectoderm9.25e-2095
presumptive ectoderm9.25e-2095
autonomic nervous system3.69e-189
peripheral nervous system1.08e-1411
gray matter2.98e-1434
regional part of nervous system7.73e-1354
neural crest-derived structure4.04e-113
neural crest4.04e-113
enteric nervous system4.04e-113
vagal neural crest4.04e-113
neural fold4.04e-113
ventral horn of spinal cord5.09e-113
regional part of spinal cord5.89e-115
gray matter of spinal cord5.89e-115
raphe nuclei8.72e-113
reticular formation8.72e-113
neurectoderm2.07e-1064
neural plate2.07e-1064
presumptive neural plate2.07e-1064
spinal cord3.82e-096
dorsal region element3.82e-096
dorsum3.82e-096
ecto-epithelium9.83e-0973
neural tube1.89e-0852
neural rod1.89e-0852
future spinal cord1.89e-0852
neural keel1.89e-0852
brain grey matter5.51e-0829
regional part of telencephalon5.51e-0829
telencephalon5.51e-0829
organ system subdivision2.64e-07194
structure with developmental contribution from neural crest3.20e-0792
basal ganglion5.34e-078
nuclear complex of neuraxis5.34e-078
aggregate regional part of brain5.34e-078
collection of basal ganglia5.34e-078
cerebral subcortex5.34e-078
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