FFCP PHASE1:Hg19::chr10:102790980..102791072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81855 | |EntrezGene=81855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16087 | |HGNC=16087 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWM7 | |UniProt=Q9BWM7 | ||
|association_with_transcript=0bp_to_ENST00000224807,ENST00000393459,NM_030971,uc001ksp.2_5end | |association_with_transcript=0bp_to_ENST00000224807,ENST00000393459,NM_030971,uc001ksp.2_5end | ||
|cluster_id=chr10:102790980..102791072,+ | |||
|description=CAGE_peak_2_at_SFXN3_5end | |description=CAGE_peak_2_at_SFXN3_5end | ||
|id=chr10:102790980..102791072,+ | |id=chr10:102790980..102791072,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-19!115;UBERON:0001049!1.64e-15!57;UBERON:0005068!1.64e-15!57;UBERON:0006241!1.64e-15!57;UBERON:0007135!1.64e-15!57;UBERON:0003075!3.38e-14!86;UBERON:0007284!3.38e-14!86;UBERON:0002616!1.79e-13!59;UBERON:0003056!2.19e-12!61;UBERON:0000955!4.92e-12!69;UBERON:0006238!4.92e-12!69;UBERON:0003080!6.73e-12!42;UBERON:0002346!9.16e-12!90;UBERON:0002780!1.23e-11!41;UBERON:0001890!1.23e-11!41;UBERON:0006240!1.23e-11!41;UBERON:0000153!1.90e-10!129;UBERON:0007811!1.90e-10!129;UBERON:0000033!2.09e-10!123;UBERON:0005743!5.98e-10!86;UBERON:0001893!6.48e-10!34;UBERON:0002020!1.74e-09!34;UBERON:0003528!1.74e-09!34;UBERON:0002791!2.12e-09!33;UBERON:0001017!2.77e-09!82;UBERON:0000064!4.10e-09!219;UBERON:0004121!4.68e-09!169;UBERON:0001869!6.90e-09!32;UBERON:0002619!2.67e-08!22;UBERON:0000073!3.12e-08!94;UBERON:0001016!3.12e-08!94;UBERON:0001950!3.19e-08!20;UBERON:0000025!7.32e-08!194;UBERON:0000924!9.14e-08!173;UBERON:0006601!9.14e-08!173;UBERON:0004111!1.45e-07!241;UBERON:0000467!3.04e-07!625;UBERON:0000480!5.01e-07!626;UBERON:0000483!7.93e-07!309 | |ontology_enrichment_uberon=UBERON:0007023!1.27e-19!115;UBERON:0001049!1.64e-15!57;UBERON:0005068!1.64e-15!57;UBERON:0006241!1.64e-15!57;UBERON:0007135!1.64e-15!57;UBERON:0003075!3.38e-14!86;UBERON:0007284!3.38e-14!86;UBERON:0002616!1.79e-13!59;UBERON:0003056!2.19e-12!61;UBERON:0000955!4.92e-12!69;UBERON:0006238!4.92e-12!69;UBERON:0003080!6.73e-12!42;UBERON:0002346!9.16e-12!90;UBERON:0002780!1.23e-11!41;UBERON:0001890!1.23e-11!41;UBERON:0006240!1.23e-11!41;UBERON:0000153!1.90e-10!129;UBERON:0007811!1.90e-10!129;UBERON:0000033!2.09e-10!123;UBERON:0005743!5.98e-10!86;UBERON:0001893!6.48e-10!34;UBERON:0002020!1.74e-09!34;UBERON:0003528!1.74e-09!34;UBERON:0002791!2.12e-09!33;UBERON:0001017!2.77e-09!82;UBERON:0000064!4.10e-09!219;UBERON:0004121!4.68e-09!169;UBERON:0001869!6.90e-09!32;UBERON:0002619!2.67e-08!22;UBERON:0000073!3.12e-08!94;UBERON:0001016!3.12e-08!94;UBERON:0001950!3.19e-08!20;UBERON:0000025!7.32e-08!194;UBERON:0000924!9.14e-08!173;UBERON:0006601!9.14e-08!173;UBERON:0004111!1.45e-07!241;UBERON:0000467!3.04e-07!625;UBERON:0000480!5.01e-07!626;UBERON:0000483!7.93e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;6.83e-09;53!UBERON:0002616;6.83e-09;53!UBERON:0001893;9.38e-09;34!UBERON:0002780;1.23e-08;41!UBERON:0001890;1.23e-08;41!UBERON:0002619;2.46e-08;22!UBERON:0001950;2.58e-08;20!UBERON:0001869;4.33e-08;32!UBERON:0002791;4.43e-08;32!UBERON:0003528;5.15e-08;34!UBERON:0002020;5.15e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.02e-19,114;UBERON:0010371,9.48e-16,104;UBERON:0001049,3.04e-15,56;UBERON:0005068,3.04e-15,56;UBERON:0006241,3.04e-15,56;UBERON:0007135,3.04e-15,56;UBERON:0003075,4.33e-15,82;UBERON:0007284,4.33e-15,82;UBERON:0000073,4.86e-15,53;UBERON:0002616,4.86e-15,53;UBERON:0002346,1.79e-12,86;UBERON:0003056,1.97e-12,61;UBERON:0000955,8.80e-12,68;UBERON:0006238,8.80e-12,68;UBERON:0002780,1.23e-11,41;UBERON:0001890,1.23e-11,41;UBERON:0003080,1.23e-11,41;UBERON:0006240,1.23e-11,41;UBERON:0001893,6.47e-10,34;UBERON:0003528,1.73e-09,34;UBERON:0002020,1.73e-09,34;UBERON:0001017,5.12e-09,81;UBERON:0002791,6.51e-09,32;UBERON:0001869,6.88e-09,32;UBERON:0002619,2.66e-08,22;UBERON:0010314,3.04e-08,132;UBERON:0001950,3.19e-08,20;UBERON:0004121,9.37e-08,171;UBERON:0000924,9.37e-08,171;UBERON:0006601,9.37e-08,171;UBERON:0000025,1.06e-07,192;UBERON:0004111,1.95e-07,240;UBERON:0001016,2.32e-07,89;UBERON:0000483,7.62e-07,306 | |||
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| ||
|short_description=p2@SFXN3 | |short_description=p2@SFXN3 | ||
}} | }} |
Latest revision as of 22:33, 15 September 2015
Short description: | p2@SFXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFXN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000224807, ENST00000393459, NM_030971, uc001ksp.2_5end |
EntrezGene: | SFXN3 |
HGNC: | 16087 |
UniProt: | Q9BWM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.02e-19 | 114 |
ecto-epithelium | 9.48e-16 | 104 |
neural tube | 3.04e-15 | 56 |
neural rod | 3.04e-15 | 56 |
future spinal cord | 3.04e-15 | 56 |
neural keel | 3.04e-15 | 56 |
neural plate | 4.33e-15 | 82 |
presumptive neural plate | 4.33e-15 | 82 |
regional part of nervous system | 4.86e-15 | 53 |
regional part of brain | 4.86e-15 | 53 |
neurectoderm | 1.79e-12 | 86 |
pre-chordal neural plate | 1.97e-12 | 61 |
brain | 8.80e-12 | 68 |
future brain | 8.80e-12 | 68 |
regional part of forebrain | 1.23e-11 | 41 |
forebrain | 1.23e-11 | 41 |
anterior neural tube | 1.23e-11 | 41 |
future forebrain | 1.23e-11 | 41 |
telencephalon | 6.47e-10 | 34 |
brain grey matter | 1.73e-09 | 34 |
gray matter | 1.73e-09 | 34 |
central nervous system | 5.12e-09 | 81 |
regional part of telencephalon | 6.51e-09 | 32 |
cerebral hemisphere | 6.88e-09 | 32 |
regional part of cerebral cortex | 2.66e-08 | 22 |
structure with developmental contribution from neural crest | 3.04e-08 | 132 |
neocortex | 3.19e-08 | 20 |
ectoderm-derived structure | 9.37e-08 | 171 |
ectoderm | 9.37e-08 | 171 |
presumptive ectoderm | 9.37e-08 | 171 |
tube | 1.06e-07 | 192 |
anatomical conduit | 1.95e-07 | 240 |
nervous system | 2.32e-07 | 89 |
epithelium | 7.62e-07 | 306 |