FFCP PHASE1:Hg19::chr10:116286563..116286598,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3983 | |EntrezGene=3983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=78 | |HGNC=78 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000369257_5end | |association_with_transcript=0bp_to_ENST00000369257_5end | ||
|cluster_id=chr10:116286563..116286598,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_4_at_ABLIM1_5end | |description=CAGE_peak_4_at_ABLIM1_5end | ||
|id=chr10:116286563..116286598,- | |id=chr10:116286563..116286598,- | ||
|ontology_enrichment_celltype=CL:0000542!3.10e-19!53;CL:0000051!3.10e-19!53;CL:0000838!8.53e-19!52;CL:0000791!8.77e-13!18;CL:0000789!8.77e-13!18;CL:0002420!8.77e-13!18;CL:0002419!8.77e-13!18;CL:0000790!8.77e-13!18;CL:0000084!2.52e-10!25;CL:0000827!2.52e-10!25;CL:0000738!5.59e-09!140;CL:0002087!7.68e-09!119;CL:0000625!1.45e-08!11;CL:0000945!4.56e-08!24;CL:0000826!4.56e-08!24;CL:0000236!4.90e-08!14 | |ontology_enrichment_celltype=CL:0000542!3.10e-19!53;CL:0000051!3.10e-19!53;CL:0000838!8.53e-19!52;CL:0000791!8.77e-13!18;CL:0000789!8.77e-13!18;CL:0002420!8.77e-13!18;CL:0002419!8.77e-13!18;CL:0000790!8.77e-13!18;CL:0000084!2.52e-10!25;CL:0000827!2.52e-10!25;CL:0000738!5.59e-09!140;CL:0002087!7.68e-09!119;CL:0000625!1.45e-08!11;CL:0000945!4.56e-08!24;CL:0000826!4.56e-08!24;CL:0000236!4.90e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.84e-13;18!CL:0000789;1.84e-13;18!CL:0002419;1.84e-13;18!CL:0000542;1.34e-11;53!CL:0000084;1.01e-10;25!CL:0000625;5.39e-09;11!CL:0000236;1.70e-08;13!CL:0000945;8.21e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.29e-19,53;CL:0000051,2.29e-19,53;CL:0000838,6.65e-19,52;CL:0000791,1.79e-13,18;CL:0000789,1.79e-13,18;CL:0002420,1.79e-13,18;CL:0002419,1.79e-13,18;CL:0000790,1.79e-13,18;CL:0000084,1.32e-10,25;CL:0000827,1.32e-10,25;CL:0000625,5.35e-09,11;CL:0002087,7.21e-09,115;CL:0000738,8.95e-09,136;CL:0000236,1.95e-08,14;CL:0000945,7.62e-08,24;CL:0000826,7.62e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000790;1.84e-13;18!CL:0000051;1.34e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-28!115;UBERON:0001049!5.63e-09!57;UBERON:0005068!5.63e-09!57;UBERON:0006241!5.63e-09!57;UBERON:0007135!5.63e-09!57;UBERON:0002616!9.26e-08!59;UBERON:0003080!6.44e-07!42;UBERON:0000178!7.82e-07!15;UBERON:0000179!7.82e-07!15;UBERON:0000463!7.82e-07!15;UBERON:0002780!9.86e-07!41;UBERON:0001890!9.86e-07!41;UBERON:0006240!9.86e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.32e-08;114!UBERON:0000178;8.71e-07;15!UBERON:0000179;8.71e-07;15!UBERON:0000463;8.71e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.43e-30,114;UBERON:0001049,2.58e-09,56;UBERON:0005068,2.58e-09,56;UBERON:0006241,2.58e-09,56;UBERON:0007135,2.58e-09,56;UBERON:0000073,5.89e-09,53;UBERON:0002616,5.89e-09,53;UBERON:0011216,2.14e-07,223;UBERON:0002780,2.68e-07,41;UBERON:0001890,2.68e-07,41;UBERON:0003080,2.68e-07,41;UBERON:0006240,2.68e-07,41;UBERON:0002346,6.91e-07,86;UBERON:0000178,7.00e-07,15;UBERON:0000179,7.00e-07,15;UBERON:0000463,7.00e-07,15 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.522371256399677,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0.61560529038394,0,1.25381888591235,0,0,0,6.80079311156766,4.76183418809685,4.80135766013443,12.5876568591649,41.0697455964018,10.217864138861,2.75826367343678,2.71085326900425,5.9160641626686,17.2751857294073,8.10364625178303,5.87200878669694,14.4038806218288,13.8375668754398,14.7567392086779,0.671746422719773,12.6318529747402,1.80302897343931,1.16318591023652,2.26725566213286,1.69808842831471,1.85943229524548,2.46700732813095,2.78735733805593,1.1507695692886,4.61089271752381,2.60130452877444,2.06847408441971,9.68227025375739,1.35426486594342,1.31769637679823,3.547779950752,1.57306439111559,3.06083892370903,6.73950956859797,3.83602275479425,1.64925650093358,2.59302754908121,1.27867425159808,2.61188314765726,4.53908179752912,1.86846674698672,3.26623264833766,3.65038042894141,2.17188844705117,3.63239701580021,6.99727508376373,1.89877432464531,0,0,0,0,0,0,0,0,0.182664153764634,49.2789484491704,46.9679205685433,48.033499708632,40.1126409212517,48.4479144313575,45.4054427564042,35.0353782575977,34.3459351632731,58.6289358182732,69.2939883457708,68.8091810625412,10.5737062863221,23.5413596452245,5.26768169550154,123.14031609126,70.3489265321005,73.6053366418243,50.8246945987661,83.7620225248327,70.0702752487405,62.3445530905316,9.91553066278045,22.0954430606128,18.1657793558569,23.8307400113214,11.4001274555851,12.3556380181884,12.9905944636904,14.0938509070783,40.2826289171723,174.088425152259,177.11202819539,149.485799041117,42.7176221969825,81.2427446436073,57.7294108410818,81.7253605222994,59.253167064282,57.9464273932212,40.8694379112801,67.7588035849978,82.9353240280631,71.2105141348371,54.6955452221679,50.9099358091049,63.304517372566,47.0694744578973,84.287803059789,0,1.34140171940727,3.70801429346238,0,0,0.579386075843295,0,0,1.60709189178915,2.66075276955077,9.83749599763012,9.8889202000773,2.5500670180478,7.78647329847302,0.324547393654683,0.522389211897802,0,2.14641561874808,0,1.85728750664782,10.5344075904354,1.72046919021225,9.71993404501264,15.2633144319483,7.1314904155684,7.15306909044175,3.55291443112578,1.8089173141853,1.42306505074684,10.3763389957048,0.402829317109147,0,0,2.57364156242108,4.0507097394088,10.0015695678169,5.83776368828041,4.50445921933289,6.13266549863533,4.74632829784064,1.09921046358244,6.58902087180316,11.6334079244498,9.59406914713576,0,1.64619665163954,0.132409180813219,0.286836620748814,1.06400514659507,2.24271040056923,3.20246987189115,1.48000529050296,0.933633106199299,2.42479209725439,1.47115712802113,6.05429710579726,0.576175924479999,0.468642863667593,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,2.38207584636044,0,0.213557388818567,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0.80823028409406,0,0,0.169560592310488,1.93260853163297,3.00020732649918,4.30206893083506,1.21973706129595,1.59035721985782,2.90484857173796,2.07322110030741,1.51392510525377,2.18986415445498,0,0,0,0,0,3.07597680103594,4.04603256187444,3.13314338848527,3.19852520923942,4.13970943775572,4.74541238222193,3.37078270400411,5.49420102350969,4.23221872641029,11.0723318193697,1.40241773803446,0,0,1.26755034821831,0.982827216677626,0,3.5317047953172,2.95172252503473,0.686271241194102,9.10927368891592,7.86812272803337,3.51851403440708,5.55530670951178,0.651616610620649,0,0,0.115930404975077,2.7003999674239,2.59859605969933,0.925971025153221,3.99533719692656,0.790204397959275,0.858486162094873,0,0,0,1.87467667973554,0.335964256397719,1.84307626415102,5.0152772713595,8.71901815541886,5.75074018747817,0.492663237895943,0,0.414656231081544,0,1.13618190083742,0.063497894292169,0,1.17217447210047,1.71072446022705,0,0,0,0.560655421726804,3.48768055066624,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,12.6656212712686,67.581550749261,50.2412249422675,50.6954993305006,0,0,0,0.837581326671744,0,3.74503511973591,5.9832291840805,3.72973962092432,0,0,0,0,0.178428988797162,0,0.468565659970853,0.601892199455438,0,0,0.664225598535437,0,0,0,0,83.1207465014007,45.9471247743654,48.5610388005672,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0.574890092096664,0,0,5.19695633243976,1.20303882181971,12.0626095506024,0.114814448164607,0,0,0.902399225814824,0.231046011313244,0,0,0.211103257785751,0,0.170093705276516,7.1252252313706,10.7959076883203,0,0,0.764628819135115,0.831076008928724,0,0,0,0,2.62411716559765,1.30151357865721,4.32772248920434,0,0,2.87132768998086,3.90036147621913,1.6068392984416,0.290012154876366,0.308097234229289,0.767518373630648,0,2.47066563197029,0.870100163485371,0.426133137080504,0.356128142586949,4.13212288402445,4.03599141466723,2.93509238737543,9.10420027699949,0,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0.404364963146632,0,2.10629228119491,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,2.16876448669825,0,0.573645408816206,0.294747123039363,0,0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| ||
|short_description=p4@ABLIM1 | |short_description=p4@ABLIM1 | ||
}} | }} |
Latest revision as of 12:43, 16 September 2015
Short description: | p4@ABLIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ABLIM1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000369257_5end |
EntrezGene: | ABLIM1 |
HGNC: | 78 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.29e-19 | 53 |
common lymphoid progenitor | 2.29e-19 | 53 |
lymphoid lineage restricted progenitor cell | 6.65e-19 | 52 |
mature alpha-beta T cell | 1.79e-13 | 18 |
alpha-beta T cell | 1.79e-13 | 18 |
immature T cell | 1.79e-13 | 18 |
mature T cell | 1.79e-13 | 18 |
immature alpha-beta T cell | 1.79e-13 | 18 |
T cell | 1.32e-10 | 25 |
pro-T cell | 1.32e-10 | 25 |
CD8-positive, alpha-beta T cell | 5.35e-09 | 11 |
nongranular leukocyte | 7.21e-09 | 115 |
leukocyte | 8.95e-09 | 136 |
B cell | 1.95e-08 | 14 |
lymphocyte of B lineage | 7.62e-08 | 24 |
pro-B cell | 7.62e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.43e-30 | 114 |
neural tube | 2.58e-09 | 56 |
neural rod | 2.58e-09 | 56 |
future spinal cord | 2.58e-09 | 56 |
neural keel | 2.58e-09 | 56 |
regional part of nervous system | 5.89e-09 | 53 |
regional part of brain | 5.89e-09 | 53 |
organ system subdivision | 2.14e-07 | 223 |
regional part of forebrain | 2.68e-07 | 41 |
forebrain | 2.68e-07 | 41 |
anterior neural tube | 2.68e-07 | 41 |
future forebrain | 2.68e-07 | 41 |
neurectoderm | 6.91e-07 | 86 |
blood | 7.00e-07 | 15 |
haemolymphatic fluid | 7.00e-07 | 15 |
organism substance | 7.00e-07 | 15 |