FFCP PHASE1:Mm9::chr5:100468911..100468922,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50926 | |EntrezGene=50926 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=D3YTQ3 | |UniProt=D3YTQ3 | ||
|association_with_transcript=-228bp_to_ENSMUST00000086900_5end | |association_with_transcript=-228bp_to_ENSMUST00000086900_5end | ||
|cluster_id=chr5:100468911..100468922,- | |||
|description=CAGE_peak_7_at_Hnrpdl_5end | |description=CAGE_peak_7_at_Hnrpdl_5end | ||
|id=chr5:100468911..100468922,- | |id=chr5:100468911..100468922,- | ||
|ontology_enrichment_celltype=CL:0000117!5.27e-13!23;CL:0000337!5.27e-13!23;CL:0000540!1.59e-10!33;CL:0000047!1.59e-10!33;CL:0000031!1.59e-10!33;CL:0000404!1.59e-10!33;CL:0000393!1.31e-07!39;CL:0000211!1.31e-07!39 | |ontology_enrichment_celltype=CL:0000117!5.27e-13!23;CL:0000337!5.27e-13!23;CL:0000540!1.59e-10!33;CL:0000047!1.59e-10!33;CL:0000031!1.59e-10!33;CL:0000404!1.59e-10!33;CL:0000393!1.31e-07!39;CL:0000211!1.31e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.71e-27,23;CL:0000337,5.71e-27,23;CL:0000540,4.23e-18,33;CL:0000047,4.23e-18,33;CL:0000031,4.23e-18,33;CL:0000404,4.23e-18,33;CL:0000393,5.88e-15,39;CL:0000211,5.88e-15,39;CL:0002319,2.39e-13,43;CL:0002613,3.14e-13,3;CL:0000221,5.44e-13,44;CL:0000133,5.44e-13,44;CL:0000120,1.03e-12,3;CL:0002612,1.24e-12,3;CL:0002321,2.71e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.94e-16!34;UBERON:0002346!1.51e-15!71;UBERON:0003075!1.51e-15!71;UBERON:0007284!1.51e-15!71;UBERON:0001017!8.12e-15!73;UBERON:0005743!8.12e-15!73;UBERON:0001049!1.42e-14!52;UBERON:0005068!1.42e-14!52;UBERON:0006241!1.42e-14!52;UBERON:0007135!1.42e-14!52;UBERON:0000073!2.81e-14!75;UBERON:0001016!2.81e-14!75;UBERON:0003056!7.86e-14!49;UBERON:0004121!5.66e-13!102;UBERON:0000924!5.66e-13!102;UBERON:0006601!5.66e-13!102;UBERON:0002791!6.39e-13!29;UBERON:0003528!6.39e-13!29;UBERON:0001893!6.39e-13!29;UBERON:0000033!1.62e-12!63;UBERON:0003080!3.47e-12!40;UBERON:0000955!4.76e-12!50;UBERON:0006238!4.76e-12!50;UBERON:0002780!1.08e-11!39;UBERON:0001890!1.08e-11!39;UBERON:0006240!1.08e-11!39;UBERON:0002616!1.90e-11!49;UBERON:0007811!1.28e-08!86;UBERON:0000956!1.47e-08!21;UBERON:0001869!1.47e-08!21;UBERON:0000203!1.47e-08!21;UBERON:0000153!1.16e-07!94;UBERON:0002619!8.48e-07!17 | |ontology_enrichment_uberon=UBERON:0002020!3.94e-16!34;UBERON:0002346!1.51e-15!71;UBERON:0003075!1.51e-15!71;UBERON:0007284!1.51e-15!71;UBERON:0001017!8.12e-15!73;UBERON:0005743!8.12e-15!73;UBERON:0001049!1.42e-14!52;UBERON:0005068!1.42e-14!52;UBERON:0006241!1.42e-14!52;UBERON:0007135!1.42e-14!52;UBERON:0000073!2.81e-14!75;UBERON:0001016!2.81e-14!75;UBERON:0003056!7.86e-14!49;UBERON:0004121!5.66e-13!102;UBERON:0000924!5.66e-13!102;UBERON:0006601!5.66e-13!102;UBERON:0002791!6.39e-13!29;UBERON:0003528!6.39e-13!29;UBERON:0001893!6.39e-13!29;UBERON:0000033!1.62e-12!63;UBERON:0003080!3.47e-12!40;UBERON:0000955!4.76e-12!50;UBERON:0006238!4.76e-12!50;UBERON:0002780!1.08e-11!39;UBERON:0001890!1.08e-11!39;UBERON:0006240!1.08e-11!39;UBERON:0002616!1.90e-11!49;UBERON:0007811!1.28e-08!86;UBERON:0000956!1.47e-08!21;UBERON:0001869!1.47e-08!21;UBERON:0000203!1.47e-08!21;UBERON:0000153!1.16e-07!94;UBERON:0002619!8.48e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.54e-27,34;UBERON:0001017,1.56e-20,73;UBERON:0001016,6.79e-20,75;UBERON:0001049,6.79e-19,52;UBERON:0005068,6.79e-19,52;UBERON:0006241,6.79e-19,52;UBERON:0007135,6.79e-19,52;UBERON:0000073,4.40e-18,54;UBERON:0003528,1.31e-17,29;UBERON:0002791,1.31e-17,29;UBERON:0001893,1.31e-17,29;UBERON:0004121,5.60e-15,95;UBERON:0000924,5.60e-15,95;UBERON:0006601,5.60e-15,95;UBERON:0002780,8.55e-15,39;UBERON:0001890,8.55e-15,39;UBERON:0006240,8.55e-15,39;UBERON:0002346,8.77e-15,64;UBERON:0003075,8.77e-15,64;UBERON:0007284,8.77e-15,64;UBERON:0003080,2.29e-14,40;UBERON:0000955,5.90e-14,47;UBERON:0006238,5.90e-14,47;UBERON:0000369,8.26e-14,5;UBERON:0002435,8.26e-14,5;UBERON:0000204,8.26e-14,5;UBERON:0010082,8.26e-14,5;UBERON:0001948,1.02e-12,5;UBERON:0002315,1.02e-12,5;UBERON:0002257,1.24e-12,3;UBERON:0010371,1.39e-12,73;UBERON:0002616,3.45e-12,46;UBERON:0003056,2.67e-11,49;UBERON:0000956,1.26e-10,21;UBERON:0001869,1.26e-10,21;UBERON:0000203,1.26e-10,21;UBERON:0002240,1.27e-10,6;UBERON:0005174,1.27e-10,6;UBERON:0001137,1.27e-10,6;UBERON:0002619,2.26e-10,17;UBERON:0010314,2.40e-09,92;UBERON:0001954,7.59e-09,7;UBERON:0003022,7.59e-09,7;UBERON:0002421,7.59e-09,7;UBERON:0000349,7.59e-09,7;UBERON:0002600,7.59e-09,7;UBERON:0002420,1.17e-08,8;UBERON:0007245,1.17e-08,8;UBERON:0010009,1.17e-08,8;UBERON:0010011,1.17e-08,8;UBERON:0000454,1.17e-08,8;UBERON:0000025,6.11e-07,114 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.503637815735669,0,0.387369970324729,0,0.234064526321993,0,0,0.856003649656029,0.174840804837995,0.333109761815663,0,0.699561878128147,0,0.685572168028694,0,0.17008658030214,0.198581902401771,0.522399578277871,0,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,1.23012957516914,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,2.02316460859598,2.64495489636016,1.90149421051854,0,0,0,0,0,0.599200221036809,0,0.933206510776299,1.21505344498522,0.841299845405528,1.14260393761521,0.662605622854841,1.46988959057945,2.1086003624012,0.919218786610021,0,0.893811366596314,0.46081959976873,2.76961204233407,2.37867873366265,3.64639359389732,0.558365998002762,0.56276261003168,0.45839474333043,2.06240009831567,1.70846016958924,2.42319279572891,0,0.226714680320357,0.289864488701678,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0.461230994512117,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0.485300549842228,0,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0.479260498023681,0,0,0.748953197024114,0.915001205637253,4.39790232395025,0.347648640384553,0.511430914660661,0.62336413367868,1.29793010454206,0.712875546952214,0.248813941220186,0.252722758433675,0.420883711772948,0.390361328888111,0.689706313300419,0.180062129805349,0.90422890701429,0.748401490664606,0.2562274405697,0.749613796477831,0,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0,0,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,1.05144974282064,1.3377599609307,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0.570676878337677,0,0,0,0,0.19496408711912,0,0,0,0,0.228497025219458,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.252946148497029,0.147610147979602,0,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.234423373184406,0,0.252470927204373,0.94652465824877,0,0.215423397732799,0.716906393857656,0.222798674082394,0.283076530788832,0,0.584511715822624,0,1.92792789853084,0,0,0.488660878060728,0.329940245945071,0,0,0,0.377210159511796,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0.177340233642274,0.356737635204141,0,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.874442509889552,0.556275906031529,0,0,0.370389054739423,0,0.136694227721025,0,0.169978429993855,0,0.276399947608848,0.954670618015114,0.474503990371703,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.247960367176008,0,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0.583353565032143,0,0.337912250981556,0.117357238645754,0.2604087696879,0.629156066554265,0,0.288030006257865,0.632022241256357,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0.295379054349154,0.100966449948148,0,0.302478555410522,0.0974578807397524,0.0962118416403295,0,0,0.665957860122194,0.0897138566094757,0.167884616364078,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,1.35004500046361,1.80128481289688,0.453142408984205,4.14208249401456,0.31136204275253,0.798049746802062,0.682934423016537,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0,0.505394423527595,0,0.377252682772152,0,0.576226371643824,0.574354689556133,0.952587382566147,0.231768651889711,0.192909220463705,0.824171801606613,0.441596760403192,0.685738504770831,0.354951612318675,0.476872379894642,0.436039249896986,0.376437521661322,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.474540072496697,0.29551344712669,0,0,0.385813221962283,0.499621155875892,0.233931608445408,0.859484216193193,0.382576664137687,0.220591419119515,0 | |phase1_expression=0,0,0,0,0.500895729946347,0.503637815735669,0,0.387369970324729,0,0.234064526321993,0,0,0.856003649656029,0.174840804837995,0.333109761815663,0,0.699561878128147,0,0.685572168028694,0,0.17008658030214,0.198581902401771,0.522399578277871,0,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,1.23012957516914,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,2.02316460859598,2.64495489636016,1.90149421051854,0,0,0,0,0,0.599200221036809,0,0.933206510776299,1.21505344498522,0.841299845405528,1.14260393761521,0.662605622854841,1.46988959057945,2.1086003624012,0.919218786610021,0,0.893811366596314,0.46081959976873,2.76961204233407,2.37867873366265,3.64639359389732,0.558365998002762,0.56276261003168,0.45839474333043,2.06240009831567,1.70846016958924,2.42319279572891,0,0.226714680320357,0.289864488701678,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0.461230994512117,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0.485300549842228,0,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0.479260498023681,0,0,0.748953197024114,0.915001205637253,4.39790232395025,0.347648640384553,0.511430914660661,0.62336413367868,1.29793010454206,0.712875546952214,0.248813941220186,0.252722758433675,0.420883711772948,0.390361328888111,0.689706313300419,0.180062129805349,0.90422890701429,0.748401490664606,0.2562274405697,0.749613796477831,0,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0,0,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,1.05144974282064,1.3377599609307,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0.570676878337677,0,0,0,0,0.19496408711912,0,0,0,0,0.228497025219458,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.252946148497029,0.147610147979602,0,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.234423373184406,0,0.252470927204373,0.94652465824877,0,0.215423397732799,0.716906393857656,0.222798674082394,0.283076530788832,0,0.584511715822624,0,1.92792789853084,0,0,0.488660878060728,0.329940245945071,0,0,0,0.377210159511796,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0.177340233642274,0.356737635204141,0,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.874442509889552,0.556275906031529,0,0,0.370389054739423,0,0.136694227721025,0,0.169978429993855,0,0.276399947608848,0.954670618015114,0.474503990371703,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.247960367176008,0,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0.583353565032143,0,0.337912250981556,0.117357238645754,0.2604087696879,0.629156066554265,0,0.288030006257865,0.632022241256357,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0.295379054349154,0.100966449948148,0,0.302478555410522,0.0974578807397524,0.0962118416403295,0,0,0.665957860122194,0.0897138566094757,0.167884616364078,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,1.35004500046361,1.80128481289688,0.453142408984205,4.14208249401456,0.31136204275253,0.798049746802062,0.682934423016537,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0,0.505394423527595,0,0.377252682772152,0,0.576226371643824,0.574354689556133,0.952587382566147,0.231768651889711,0.192909220463705,0.824171801606613,0.441596760403192,0.685738504770831,0.354951612318675,0.476872379894642,0.436039249896986,0.376437521661322,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.474540072496697,0.29551344712669,0,0,0.385813221962283,0.499621155875892,0.233931608445408,0.859484216193193,0.382576664137687,0.220591419119515,0 | ||
|short_description=p7@Hnrpdl | |short_description=p7@Hnrpdl | ||
}} | }} |
Latest revision as of 11:31, 1 October 2015
Short description: | p7@Hnrpdl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Hnrpdl_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -228bp_to_ENSMUST00000086900_5end |
EntrezGene: | Hnrpdl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.71e-27 | 23 |
neuroblast (sensu Vertebrata) | 5.71e-27 | 23 |
neuron | 4.23e-18 | 33 |
neuronal stem cell | 4.23e-18 | 33 |
neuroblast | 4.23e-18 | 33 |
electrically signaling cell | 4.23e-18 | 33 |
electrically responsive cell | 5.88e-15 | 39 |
electrically active cell | 5.88e-15 | 39 |
neural cell | 2.39e-13 | 43 |
striatum neuron | 3.14e-13 | 3 |
ectodermal cell | 5.44e-13 | 44 |
neurectodermal cell | 5.44e-13 | 44 |
granule cell | 1.03e-12 | 3 |
neuron of the ventral spinal cord | 1.24e-12 | 3 |
embryonic cell | 2.71e-07 | 70 |