FFCP PHASE1:Hg19::chr14:61448418..61448429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57570 | |EntrezGene=57570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23141 | |HGNC=23141 | ||
|TSSclassifier=strong | |||
|UniProt=Q32P41 | |UniProt=Q32P41 | ||
|association_with_transcript=-342bp_to_ENST00000261249_5end | |association_with_transcript=-342bp_to_ENST00000261249_5end | ||
|cluster_id=chr14:61448418..61448429,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_TRMT5_5end | |description=CAGE_peak_5_at_TRMT5_5end | ||
|id=chr14:61448418..61448429,- | |id=chr14:61448418..61448429,- | ||
|ontology_enrichment_celltype=CL:0002057!5.48e-57!42;CL:0000860!2.35e-52!45;CL:0002194!9.70e-52!63;CL:0000576!9.70e-52!63;CL:0000040!9.70e-52!63;CL:0000559!9.70e-52!63;CL:0002009!1.00e-49!65;CL:0000839!2.07e-47!70;CL:0000766!4.02e-47!76;CL:0000557!1.52e-46!71;CL:0002087!1.92e-31!119;CL:0000738!2.77e-28!140;CL:0002031!2.87e-28!124;CL:0000763!2.59e-27!112;CL:0000049!2.59e-27!112;CL:0000037!4.79e-20!172;CL:0000566!4.79e-20!172;CL:0002032!1.31e-19!165;CL:0000837!1.31e-19!165;CL:0000988!4.34e-18!182 | |ontology_enrichment_celltype=CL:0002057!5.48e-57!42;CL:0000860!2.35e-52!45;CL:0002194!9.70e-52!63;CL:0000576!9.70e-52!63;CL:0000040!9.70e-52!63;CL:0000559!9.70e-52!63;CL:0002009!1.00e-49!65;CL:0000839!2.07e-47!70;CL:0000766!4.02e-47!76;CL:0000557!1.52e-46!71;CL:0002087!1.92e-31!119;CL:0000738!2.77e-28!140;CL:0002031!2.87e-28!124;CL:0000763!2.59e-27!112;CL:0000049!2.59e-27!112;CL:0000037!4.79e-20!172;CL:0000566!4.79e-20!172;CL:0002032!1.31e-19!165;CL:0000837!1.31e-19!165;CL:0000988!4.34e-18!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.43e-130;33!CL:0002057;3.43e-130;33!CL:0000473;3.08e-87;39!CL:0000234;3.08e-87;39!CL:0000576;1.10e-70;48!CL:0000766;7.80e-42;69!CL:0002087;3.91e-18;104!CL:0000763;8.68e-17;100!CL:0000738;3.06e-11;136!CL:0002393;2.32e-09;6!CL:0002397;2.32e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.95e-134,42;CL:0002057,1.95e-134,42;CL:0000473,5.45e-117,48;CL:0000234,5.45e-117,48;CL:0002194,1.47e-92,59;CL:0000576,1.47e-92,59;CL:0000040,1.47e-92,59;CL:0000559,1.47e-92,59;CL:0002009,2.10e-89,61;CL:0000839,2.42e-82,66;CL:0000557,4.69e-81,67;CL:0000766,3.82e-75,72;CL:0000763,1.42e-48,108;CL:0000049,1.42e-48,108;CL:0002087,2.55e-45,115;CL:0002031,3.18e-43,120;CL:0000738,1.52e-37,136;CL:0002032,6.54e-31,161;CL:0000837,6.54e-31,161;CL:0000037,2.10e-29,168;CL:0000988,1.22e-27,177;CL:0000134,4.84e-11,354;CL:0002320,1.02e-10,361;CL:0000219,1.44e-09,386;CL:0000048,5.14e-09,427;CL:0000723,8.27e-09,433;CL:0000034,1.53e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-98;42!CL:0000049;1.76e-13;108!UBERON:0005425;3.84e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.19e-41!80;UBERON:0001474!9.46e-38!86;UBERON:0002193!6.15e-36!112;UBERON:0002390!1.72e-35!102;UBERON:0003061!1.72e-35!102;UBERON:0002405!1.14e-31!115;UBERON:0004765!4.88e-30!101;UBERON:0001434!4.88e-30!101;UBERON:0003081!5.97e-18!216;UBERON:0002204!2.00e-15!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.84e-07;1!UBERON:0001785;3.84e-07;1!UBERON:0002464;3.84e-07;1!UBERON:0004904;3.84e-07;1!UBERON:0001021;3.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.73e-71,76;UBERON:0001474,1.86e-65,82;UBERON:0002405,4.11e-61,93;UBERON:0004765,3.09e-59,90;UBERON:0002390,5.08e-54,98;UBERON:0003061,5.08e-54,98;UBERON:0001434,7.61e-53,100;UBERON:0002193,5.74e-52,108;UBERON:0002204,1.30e-29,167;UBERON:0003081,2.06e-23,203;UBERON:0000926,4.08e-13,315;UBERON:0004120,4.08e-13,315;UBERON:0006603,4.08e-13,315;UBERON:0002384,2.85e-10,371;UBERON:0000941,4.09e-07,1;UBERON:0001785,4.09e-07,1;UBERON:0002464,4.09e-07,1;UBERON:0004904,4.09e-07,1;UBERON:0001021,4.09e-07,1;UBERON:0003902,4.09e-07,1;UBERON:0005425,4.09e-07,1 | |||
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| ||
|short_description=p5@TRMT5 | |short_description=p5@TRMT5 | ||
}} | }} |
Latest revision as of 21:09, 24 September 2015
Short description: | p5@TRMT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRMT5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -342bp_to_ENST00000261249_5end |
EntrezGene: | TRMT5 |
HGNC: | 23141 |
UniProt: | Q32P41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.95e-134 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.95e-134 | 42 |
defensive cell | 5.45e-117 | 48 |
phagocyte | 5.45e-117 | 48 |
monopoietic cell | 1.47e-92 | 59 |
monocyte | 1.47e-92 | 59 |
monoblast | 1.47e-92 | 59 |
promonocyte | 1.47e-92 | 59 |
macrophage dendritic cell progenitor | 2.10e-89 | 61 |
myeloid lineage restricted progenitor cell | 2.42e-82 | 66 |
granulocyte monocyte progenitor cell | 4.69e-81 | 67 |
myeloid leukocyte | 3.82e-75 | 72 |
myeloid cell | 1.42e-48 | 108 |
common myeloid progenitor | 1.42e-48 | 108 |
nongranular leukocyte | 2.55e-45 | 115 |
hematopoietic lineage restricted progenitor cell | 3.18e-43 | 120 |
leukocyte | 1.52e-37 | 136 |
hematopoietic oligopotent progenitor cell | 6.54e-31 | 161 |
hematopoietic multipotent progenitor cell | 6.54e-31 | 161 |
hematopoietic stem cell | 2.10e-29 | 168 |
hematopoietic cell | 1.22e-27 | 177 |
mesenchymal cell | 4.84e-11 | 354 |
connective tissue cell | 1.02e-10 | 361 |
motile cell | 1.44e-09 | 386 |
multi fate stem cell | 5.14e-09 | 427 |
somatic stem cell | 8.27e-09 | 433 |
stem cell | 1.53e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.73e-71 | 76 |
bone element | 1.86e-65 | 82 |
immune system | 4.11e-61 | 93 |
skeletal element | 3.09e-59 | 90 |
hematopoietic system | 5.08e-54 | 98 |
blood island | 5.08e-54 | 98 |
skeletal system | 7.61e-53 | 100 |
hemolymphoid system | 5.74e-52 | 108 |
musculoskeletal system | 1.30e-29 | 167 |
lateral plate mesoderm | 2.06e-23 | 203 |
mesoderm | 4.08e-13 | 315 |
mesoderm-derived structure | 4.08e-13 | 315 |
presumptive mesoderm | 4.08e-13 | 315 |
connective tissue | 2.85e-10 | 371 |
cranial nerve II | 4.09e-07 | 1 |
cranial nerve | 4.09e-07 | 1 |
nerve trunk | 4.09e-07 | 1 |
nerve connecting eye with brain | 4.09e-07 | 1 |
nerve | 4.09e-07 | 1 |
retinal neural layer | 4.09e-07 | 1 |
presumptive neural retina | 4.09e-07 | 1 |