FFCP PHASE1:Hg19::chr10:28822037..28822082,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:28822037..28822082,+
|short_description=p1@WAC
|description=CAGE_peak_1_at_WAC_5end
|association_with_transcript=-159bp_to_ENST00000347934_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51322 | |EntrezGene=51322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17327 | |HGNC=17327 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BTA9 | |UniProt=Q9BTA9 | ||
|association_with_transcript=-159bp_to_ENST00000347934_5end | |||
|cluster_id=chr10:28822037..28822082,+ | |||
|description=CAGE_peak_1_at_WAC_5end | |||
|id=chr10:28822037..28822082,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.08e-15!140;CL:0000037!3.47e-15!172;CL:0000566!3.47e-15!172;CL:0002032!5.57e-14!165;CL:0000837!5.57e-14!165;CL:0000766!1.72e-13!76;CL:0002057!1.73e-13!42;CL:0000763!1.90e-13!112;CL:0000049!1.90e-13!112;CL:0000860!2.06e-12!45;CL:0000988!2.71e-12!182;CL:0002031!1.32e-11!124;CL:0000557!4.22e-11!71;CL:0000839!1.12e-10!70;CL:0002087!4.05e-10!119;CL:0002009!5.99e-10!65;CL:0002194!2.08e-09!63;CL:0000576!2.08e-09!63;CL:0000040!2.08e-09!63;CL:0000559!2.08e-09!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-10;33!CL:0002057;1.43e-10;33!CL:0000576;8.14e-09;48!CL:0000766;7.21e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.25e-16,136;CL:0000037,1.34e-15,168;CL:0002032,2.21e-14,161;CL:0000837,2.21e-14,161;CL:0000766,2.63e-14,72;CL:0000763,5.21e-14,108;CL:0000049,5.21e-14,108;CL:0000860,1.73e-13,42;CL:0002057,1.73e-13,42;CL:0000988,4.40e-13,177;CL:0002031,4.74e-12,120;CL:0000557,8.01e-12,67;CL:0000839,2.21e-11,66;CL:0002009,1.18e-10,61;CL:0002087,1.59e-10,115;CL:0002194,4.28e-10,59;CL:0000576,4.28e-10,59;CL:0000040,4.28e-10,59;CL:0000559,4.28e-10,59;CL:0000473,5.05e-10,48;CL:0000234,5.05e-10,48 | |||
|ontology_enrichment_development_v019=CL:0002057;3.91e-10;42!UBERON:0006601;2.75e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.20e-40!115;UBERON:0001049!3.91e-16!57;UBERON:0005068!3.91e-16!57;UBERON:0006241!3.91e-16!57;UBERON:0007135!3.91e-16!57;UBERON:0003080!1.50e-14!42;UBERON:0002780!1.61e-14!41;UBERON:0001890!1.61e-14!41;UBERON:0006240!1.61e-14!41;UBERON:0002616!2.59e-13!59;UBERON:0002390!1.43e-12!102;UBERON:0003061!1.43e-12!102;UBERON:0000955!5.95e-12!69;UBERON:0006238!5.95e-12!69;UBERON:0002020!1.93e-11!34;UBERON:0003528!1.93e-11!34;UBERON:0001893!2.84e-11!34;UBERON:0001017!5.03e-11!82;UBERON:0000073!5.16e-11!94;UBERON:0001016!5.16e-11!94;UBERON:0002791!7.17e-11!33;UBERON:0005743!1.99e-10!86;UBERON:0001869!2.27e-10!32;UBERON:0003075!1.51e-09!86;UBERON:0007284!1.51e-09!86;UBERON:0002193!1.70e-09!112;UBERON:0002346!2.94e-09!90;UBERON:0002619!1.71e-08!22;UBERON:0002371!1.27e-07!80;UBERON:0001950!1.58e-07!20;UBERON:0000956!1.70e-07!25;UBERON:0000203!1.70e-07!25;UBERON:0001474!2.06e-07!86;UBERON:0003056!3.21e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.85e-11;114!UBERON:0002780;8.43e-11;41!UBERON:0001890;8.43e-11;41!UBERON:0001893;5.40e-10;34!UBERON:0000073;9.33e-10;53!UBERON:0002616;9.33e-10;53!UBERON:0003528;9.84e-10;34!UBERON:0002020;9.84e-10;34!UBERON:0002791;1.89e-09;32!UBERON:0001869;2.46e-09;32!UBERON:0002619;1.72e-08;22!UBERON:0001950;1.58e-07;20!UBERON:0000956;1.70e-07;25!UBERON:0000203;1.70e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.19e-39,114;UBERON:0001049,4.45e-16,56;UBERON:0005068,4.45e-16,56;UBERON:0006241,4.45e-16,56;UBERON:0007135,4.45e-16,56;UBERON:0000073,1.59e-15,53;UBERON:0002616,1.59e-15,53;UBERON:0002780,1.61e-14,41;UBERON:0001890,1.61e-14,41;UBERON:0003080,1.61e-14,41;UBERON:0006240,1.61e-14,41;UBERON:0002390,3.81e-13,98;UBERON:0003061,3.81e-13,98;UBERON:0000955,7.32e-12,68;UBERON:0006238,7.32e-12,68;UBERON:0001016,1.72e-11,89;UBERON:0003528,1.93e-11,34;UBERON:0002020,1.93e-11,34;UBERON:0001893,2.84e-11,34;UBERON:0001017,6.29e-11,81;UBERON:0002791,1.76e-10,32;UBERON:0001869,2.27e-10,32;UBERON:0002193,6.67e-10,108;UBERON:0003075,1.97e-09,82;UBERON:0007284,1.97e-09,82;UBERON:0002346,3.94e-09,86;UBERON:0002619,1.71e-08,22;UBERON:0002371,4.57e-08,76;UBERON:0001474,8.12e-08,82;UBERON:0003056,1.51e-07,61;UBERON:0001950,1.58e-07,20;UBERON:0000956,1.70e-07,25;UBERON:0000203,1.70e-07,25 | |||
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| ||
|short_description=p1@WAC | |||
}} | }} |
Latest revision as of 20:10, 17 September 2015
Short description: | p1@WAC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WAC_5end |
Coexpression cluster: | NA |
Association with transcript: | -159bp_to_ENST00000347934_5end |
EntrezGene: | WAC |
HGNC: | 17327 |
UniProt: | Q9BTA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.25e-16 | 136 |
hematopoietic stem cell | 1.34e-15 | 168 |
hematopoietic oligopotent progenitor cell | 2.21e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.21e-14 | 161 |
myeloid leukocyte | 2.63e-14 | 72 |
myeloid cell | 5.21e-14 | 108 |
common myeloid progenitor | 5.21e-14 | 108 |
classical monocyte | 1.73e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-13 | 42 |
hematopoietic cell | 4.40e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 4.74e-12 | 120 |
granulocyte monocyte progenitor cell | 8.01e-12 | 67 |
myeloid lineage restricted progenitor cell | 2.21e-11 | 66 |
macrophage dendritic cell progenitor | 1.18e-10 | 61 |
nongranular leukocyte | 1.59e-10 | 115 |
monopoietic cell | 4.28e-10 | 59 |
monocyte | 4.28e-10 | 59 |
monoblast | 4.28e-10 | 59 |
promonocyte | 4.28e-10 | 59 |
defensive cell | 5.05e-10 | 48 |
phagocyte | 5.05e-10 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.19e-39 | 114 |
neural tube | 4.45e-16 | 56 |
neural rod | 4.45e-16 | 56 |
future spinal cord | 4.45e-16 | 56 |
neural keel | 4.45e-16 | 56 |
regional part of nervous system | 1.59e-15 | 53 |
regional part of brain | 1.59e-15 | 53 |
regional part of forebrain | 1.61e-14 | 41 |
forebrain | 1.61e-14 | 41 |
anterior neural tube | 1.61e-14 | 41 |
future forebrain | 1.61e-14 | 41 |
hematopoietic system | 3.81e-13 | 98 |
blood island | 3.81e-13 | 98 |
brain | 7.32e-12 | 68 |
future brain | 7.32e-12 | 68 |
nervous system | 1.72e-11 | 89 |
brain grey matter | 1.93e-11 | 34 |
gray matter | 1.93e-11 | 34 |
telencephalon | 2.84e-11 | 34 |
central nervous system | 6.29e-11 | 81 |
regional part of telencephalon | 1.76e-10 | 32 |
cerebral hemisphere | 2.27e-10 | 32 |
hemolymphoid system | 6.67e-10 | 108 |
neural plate | 1.97e-09 | 82 |
presumptive neural plate | 1.97e-09 | 82 |
neurectoderm | 3.94e-09 | 86 |
regional part of cerebral cortex | 1.71e-08 | 22 |
bone marrow | 4.57e-08 | 76 |
bone element | 8.12e-08 | 82 |
pre-chordal neural plate | 1.51e-07 | 61 |
neocortex | 1.58e-07 | 20 |
cerebral cortex | 1.70e-07 | 25 |
pallium | 1.70e-07 | 25 |