FFCP PHASE1:Hg19::chr12:56122207..56122218,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=967 | |EntrezGene=967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1692 | |HGNC=1692 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc001shm.2_5end | |association_with_transcript=2bp_to_uc001shm.2_5end | ||
|cluster_id=chr12:56122207..56122218,- | |||
|coexpression_cluster_id=C2219 | |||
|description=CAGE_peak_16_at_CD63_5end | |description=CAGE_peak_16_at_CD63_5end | ||
|id=chr12:56122207..56122218,- | |id=chr12:56122207..56122218,- | ||
|ontology_enrichment_celltype=CL:0000055!2.81e-19!180;CL:0000548!1.39e-18!679;CL:0000004!1.39e-18!679;CL:0000255!1.39e-18!679;CL:0000012!2.35e-18!682;CL:0000144!2.26e-17!625;CL:0002371!5.06e-17!591;CL:0000192!3.07e-15!42;CL:0000514!3.07e-15!42;CL:0000183!3.37e-15!59;CL:0000680!1.03e-14!57;CL:0000056!1.03e-14!57;CL:0000355!1.03e-14!57;CL:0000222!1.33e-14!119;CL:0000187!4.44e-13!54;CL:0000359!1.34e-12!32;CL:0000220!4.17e-12!246;CL:0002321!7.07e-12!248;CL:0000003!1.54e-11!722;CL:0000393!2.71e-10!60;CL:0000211!2.71e-10!60;CL:0000048!7.74e-09!430;CL:0000723!3.66e-08!436;CL:0000034!1.07e-07!444 | |ontology_enrichment_celltype=CL:0000055!2.81e-19!180;CL:0000548!1.39e-18!679;CL:0000004!1.39e-18!679;CL:0000255!1.39e-18!679;CL:0000012!2.35e-18!682;CL:0000144!2.26e-17!625;CL:0002371!5.06e-17!591;CL:0000192!3.07e-15!42;CL:0000514!3.07e-15!42;CL:0000183!3.37e-15!59;CL:0000680!1.03e-14!57;CL:0000056!1.03e-14!57;CL:0000355!1.03e-14!57;CL:0000222!1.33e-14!119;CL:0000187!4.44e-13!54;CL:0000359!1.34e-12!32;CL:0000220!4.17e-12!246;CL:0002321!7.07e-12!248;CL:0000003!1.54e-11!722;CL:0000393!2.71e-10!60;CL:0000211!2.71e-10!60;CL:0000048!7.74e-09!430;CL:0000723!3.66e-08!436;CL:0000034!1.07e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.40e-16;32!CL:0000192;1.55e-13;43!CL:0000134;2.64e-10;55!CL:0000048;3.29e-10;58!CL:0000723;6.84e-10;61!CL:0002594;2.94e-08;4!CL:0002540;1.06e-07;6!CL:0000187;3.54e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.05e-19,43;CL:0000514,4.05e-19,43;CL:0000359,4.39e-17,32;CL:0000680,1.48e-16,58;CL:0000056,1.48e-16,58;CL:0000355,1.48e-16,58;CL:0000048,1.85e-13,427;CL:0000187,1.98e-13,55;CL:0000723,5.77e-13,433;CL:0000034,2.50e-12,441;CL:0000393,1.86e-11,61;CL:0000211,1.86e-11,61;CL:0000222,5.72e-11,121;CL:0002594,1.17e-08,4;CL:0002540,1.01e-07,6;CL:0002567,5.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;1.55e-13;43!CL:0000355;4.62e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.72e-09;14!DOID:0060084;6.75e-07;3!DOID:127;6.75e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.17e-10,14;DOID:0060084,5.81e-07,3;DOID:127,5.81e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.40e-12!61;UBERON:0002036!2.40e-12!61;UBERON:0003082!2.40e-12!61;UBERON:0002049!3.23e-12!79;UBERON:0007798!3.23e-12!79;UBERON:0001637!6.64e-12!42;UBERON:0003509!6.64e-12!42;UBERON:0004572!6.64e-12!42;UBERON:0000926!1.13e-11!448;UBERON:0004120!1.13e-11!448;UBERON:0006603!1.13e-11!448;UBERON:0000914!1.31e-11!83;UBERON:0002329!1.31e-11!83;UBERON:0003077!1.31e-11!83;UBERON:0003059!1.31e-11!83;UBERON:0007282!1.31e-11!83;UBERON:0009618!1.31e-11!83;UBERON:0007285!1.31e-11!83;UBERON:0004290!1.51e-11!70;UBERON:0002385!2.63e-11!63;UBERON:0001015!2.63e-11!63;UBERON:0000383!2.63e-11!63;UBERON:0002204!5.42e-11!167;UBERON:0005256!6.85e-11!143;UBERON:0004573!6.69e-10!33;UBERON:0004571!6.69e-10!33;UBERON:0002100!9.26e-10!216;UBERON:0000055!9.59e-10!69;UBERON:0000486!1.02e-09!82;UBERON:0000490!2.73e-09!138;UBERON:0001981!3.13e-09!60;UBERON:0007500!3.13e-09!60;UBERON:0004537!3.13e-09!60;UBERON:0006965!3.13e-09!60;UBERON:0003914!4.57e-08!118;UBERON:0003104!1.95e-07!238;UBERON:0009142!1.95e-07!238;UBERON:0004872!4.96e-07!84;UBERON:0004535!8.39e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;2.94e-08;4!UBERON:0001637;9.60e-07;42!UBERON:0003509;9.60e-07;42!UBERON:0004572;9.60e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.51e-15,62;UBERON:0002036,5.51e-15,62;UBERON:0003082,5.51e-15,62;UBERON:0007503,1.06e-14,78;UBERON:0002329,1.99e-14,71;UBERON:0003059,1.99e-14,71;UBERON:0007282,1.99e-14,71;UBERON:0004290,1.99e-14,71;UBERON:0009618,1.99e-14,71;UBERON:0002385,2.82e-14,64;UBERON:0001015,2.82e-14,64;UBERON:0000383,2.82e-14,64;UBERON:0002204,3.34e-14,167;UBERON:0003077,4.09e-14,72;UBERON:0007285,4.09e-14,72;UBERON:0000926,6.49e-14,315;UBERON:0004120,6.49e-14,315;UBERON:0006603,6.49e-14,315;UBERON:0007524,8.26e-14,73;UBERON:0000486,3.59e-12,83;UBERON:0001637,2.32e-10,42;UBERON:0003509,2.32e-10,42;UBERON:0004572,2.32e-10,42;UBERON:0005256,4.31e-10,122;UBERON:0001310,1.17e-08,4;UBERON:0004573,4.39e-08,33;UBERON:0004571,4.39e-08,33;UBERON:0003104,8.04e-08,160;UBERON:0009142,8.04e-08,160;UBERON:0007500,9.37e-08,59;UBERON:0001981,9.37e-08,59;UBERON:0004537,9.37e-08,59;UBERON:0006965,9.37e-08,59;UBERON:0004872,9.83e-08,83;UBERON:0003081,1.09e-07,203;UBERON:0002049,2.01e-07,78;UBERON:0007798,2.01e-07,78;UBERON:0000055,8.21e-07,68;UBERON:0003513,9.13e-07,7 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,1.34088328328186,0,0,0,0.783556884599516,0.982935746006035,0.697801167972428,0.218441372130172,0.527533956456907,0.618831764800233,0.662794751455832,0.672325146451775,1.20538905604795,0,1.46379839637152,0.369363174230364,0.816002764977012,0,0.286235987131057,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,1.34349284543955,1.94336199611388,1.54545340580512,0.290796477559129,0,0.485168122375632,0.697287110717054,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0,0,0.564727018627814,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0,1.00499466102697,1.5644487552606,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,2.3858578411533,0,0.189069634328136,0.221729397462564,0.263504357079378,0,0.364295288292542,0.370784442784429,2.59637914923747,0.870648686496336,3.0580330919339,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0,1.13061588384802,0.838998872419812,0.275118041940067,0.208994966536811,0.775250277507987,1.06729878806013,0.33472061276467,0,0.760272105718513,0,0,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,1.09921046358244,0,0,0,0,0.25326102332916,0.662045904066094,0.286836620748814,0.354668382198357,0,0,0.74000264525148,0,0.269421344139376,1.14423332179421,0.151357427644931,1.15235184896,0.468642863667593,0.312160076830321,0,1.19558944441441,0.117434498643765,0,0.702254033511242,0.816616685019573,0.859840221182376,1.34323515528495,1.18800285728205,0.741800787835671,0.910161361938026,0.718618141816238,0.673344455816265,0.250237039743928,0.554128230968366,0,0.919463387397059,1.05166641234618,0.226864366320042,0,0.213557388818567,0.211931901159562,0.300091096084402,0.824420233907511,1.03056216018252,0.37223371266318,0.337552664482532,0.0974370051611986,0.504867548488229,0.184099797284599,0.161646056818812,0,0.201504196455281,0.169560592310488,0.57978255948989,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,1.56449532329816,0,0,0,0.721879481669586,0,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0,0.269662616320329,0,0,0.738155454624648,1.40241773803446,0.8231480226628,2.94017422771084,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0.301586917234893,0,0.651616610620649,3.11980435583874,0,0.231860809950154,0.469634776943287,0.144366447761074,0,0.190254152234598,0.790204397959275,0,1.23108503043699,3.51006397708857,2.22946743433092,1.87467667973554,0,0,0.0895585227028483,0.290633938513962,0.383382679165211,0.985326475791887,1.58487181223807,0.414656231081544,0.288239906833923,0.37872730027914,1.58744735730423,1.90994212779139,4.68869788840188,1.71072446022705,0.308482478109971,1.20137223137567,0.571652865261156,0,0.87192013766656,0.1466765716419,0.775630294546667,3.57656445851882,0.845302752556,0.797814349754612,0,1.02882949704857,0,1.3321108950805,0,1.08524321078289,0,0,0.710783897485092,0,0.602878754119172,1.74306691720059,0.499864955910285,0,1.00451418286425,0,1.19812427745791,0,0,2.60606352001643,1.64381058040307,1.25342674267927,0.112085143993527,0.197030760201927,0,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0,0.36807447515742,0,1.35632511849868,0.207970861530807,0.892144943985809,0.157702415033935,0.117141414992713,1.20378439891088,6.82222512167955,1.03473071292505,0,2.02806085395873,0.60818530127658,0.979005787313703,1.37257369524342,0,0,0,0,0,0,0,0.153461973288062,0,0.384417447767103,0.511707249066704,0,0,0.308419387605311,1.06537035187876,0.492762936082855,0,0.697262270759755,0.241718899183244,0.200506470303285,0,0.34444334449382,1.0925470080403,1.18011973463482,0.902399225814824,0.385076685522074,0.784349769176855,1.46139224653261,0.211103257785751,0,0.340187410553031,0,0,1.08378575017541,3.01013864312912,0.764628819135115,0.831076008928724,0.223874754722178,0,0.261435451024901,1.02580050046556,0.328014645699706,0.325378394664303,0.103041011647722,0.0915694648183434,0,0,0,3.21367859688319,0.193341436584244,0.154048617114644,0.767518373630648,0.413509717453592,0.214840489736547,0.435050081742686,0.767039646744908,0.178064071293475,0.495854746082934,0.192190067365106,0,0.10115778085555,0.929691098594572,2.83331112147576,2.0911118104818,0.924100740528266,3.19383618190213,0,0.55597265731176,1.28812398067792,1.48863347743867,0.316379424718726,1.14378116354295,1.02359116524534,0.42793898803392,0.95460974377781,1.56989728039846,0.719489830333259,0.823611089208164,1.06031162111118,1.61745985258653,1.58510321173008,0.842516912477962,0,0.974853958525138,2.11300293513511,0.136499911407986,1.27264888758341,0,1.10273068709225,1.99031692572366,2.19225442626881,2.31510213706675,0.6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| ||
|short_description=p16@CD63 | |short_description=p16@CD63 | ||
}} | }} |
Latest revision as of 08:14, 19 September 2015
Short description: | p16@CD63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CD63_5end |
Coexpression cluster: | C2219_Smooth_Mesenchymal_Pericytes_mesenchymal_Melanocyte_Preadipocyte_Monocytederived |
Association with transcript: | 2bp_to_uc001shm.2_5end |
EntrezGene: | CD63 |
HGNC: | 1692 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.05e-19 | 43 |
smooth muscle myoblast | 4.05e-19 | 43 |
vascular associated smooth muscle cell | 4.39e-17 | 32 |
muscle precursor cell | 1.48e-16 | 58 |
myoblast | 1.48e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.48e-16 | 58 |
multi fate stem cell | 1.85e-13 | 427 |
muscle cell | 1.98e-13 | 55 |
somatic stem cell | 5.77e-13 | 433 |
stem cell | 2.50e-12 | 441 |
electrically responsive cell | 1.86e-11 | 61 |
electrically active cell | 1.86e-11 | 61 |
mesodermal cell | 5.72e-11 | 121 |
smooth muscle cell of the umbilical artery | 1.17e-08 | 4 |
mesenchymal stem cell of the bone marrow | 1.01e-07 | 6 |
light melanocyte | 5.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.17e-10 | 14 |
cell type benign neoplasm | 5.81e-07 | 3 |
leiomyoma | 5.81e-07 | 3 |