FFCP PHASE1:Hg19::chr12:88813035..88813063,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:88813035..88813063,- | |||
|coexpression_cluster_id=C2247 | |||
|description=CAGE_peak_at_chr12:88813035..88813063,- | |description=CAGE_peak_at_chr12:88813035..88813063,- | ||
|id=chr12:88813035..88813063,- | |id=chr12:88813035..88813063,- | ||
|ontology_enrichment_celltype=CL:0000055!7.15e-39!180;CL:0000057!2.81e-28!75;CL:0000187!1.96e-22!54;CL:0000680!6.16e-22!57;CL:0000056!6.16e-22!57;CL:0000355!6.16e-22!57;CL:0000183!2.18e-20!59;CL:0000393!3.72e-18!60;CL:0000211!3.72e-18!60;CL:0002620!4.10e-17!23;CL:0000192!6.61e-17!42;CL:0000514!6.61e-17!42;CL:0000048!1.37e-16!430;CL:0000723!1.64e-15!436;CL:0000034!6.36e-15!444;CL:0000359!1.08e-14!32;CL:0000222!4.19e-09!119;CL:0002539!2.06e-07!10;CL:0002494!2.60e-07!16;CL:0002570!6.32e-07!8;CL:0002371!7.06e-07!591 | |ontology_enrichment_celltype=CL:0000055!7.15e-39!180;CL:0000057!2.81e-28!75;CL:0000187!1.96e-22!54;CL:0000680!6.16e-22!57;CL:0000056!6.16e-22!57;CL:0000355!6.16e-22!57;CL:0000183!2.18e-20!59;CL:0000393!3.72e-18!60;CL:0000211!3.72e-18!60;CL:0002620!4.10e-17!23;CL:0000192!6.61e-17!42;CL:0000514!6.61e-17!42;CL:0000048!1.37e-16!430;CL:0000723!1.64e-15!436;CL:0000034!6.36e-15!444;CL:0000359!1.08e-14!32;CL:0000222!4.19e-09!119;CL:0002539!2.06e-07!10;CL:0002494!2.60e-07!16;CL:0002570!6.32e-07!8;CL:0002371!7.06e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.92e-23;23!CL:0000359;2.92e-17;32!CL:0000187;8.08e-14;55!CL:0000192;9.20e-13;43!CL:0000057;1.27e-12;73!CL:0000393;4.75e-11;61!CL:0000211;4.75e-11;61!CL:0002494;9.76e-10;16!CL:0002539;1.54e-09;10!CL:0002570;9.05e-09;8!CL:0000188;9.59e-08;9!CL:0002551;9.92e-08;6!CL:0000723;1.82e-07;61!CL:0002320;7.10e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.00e-31,76;CL:0000187,3.79e-25,55;CL:0000680,4.76e-23,58;CL:0000056,4.76e-23,58;CL:0000355,4.76e-23,58;CL:0002620,5.74e-23,23;CL:0000393,3.61e-21,61;CL:0000211,3.61e-21,61;CL:0000048,9.61e-20,427;CL:0000723,7.34e-19,433;CL:0000034,3.37e-18,441;CL:0000359,7.80e-18,32;CL:0000192,1.11e-17,43;CL:0000514,1.11e-17,43;CL:0000222,6.29e-11,121;CL:0002494,1.38e-09,16;CL:0002539,1.66e-09,10;CL:0002570,7.57e-09,8;CL:0000188,9.14e-08,9;CL:0002551,1.03e-07,6;CL:0002320,6.72e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;9.20e-13;43!CL:0000355;1.19e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.36e-08;14!DOID:17;5.17e-07;5!DOID:450;5.17e-07;5!DOID:66;5.17e-07;5!DOID:423;5.17e-07;5!DOID:0080000;5.17e-07;5!DOID:11722;5.17e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.17e-08,14;DOID:17,5.22e-07,5;DOID:450,5.22e-07,5;DOID:66,5.22e-07,5;DOID:423,5.22e-07,5;DOID:0080000,5.22e-07,5;DOID:11722,5.22e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.48e-27!83;UBERON:0002329!1.48e-27!83;UBERON:0003077!1.48e-27!83;UBERON:0003059!1.48e-27!83;UBERON:0007282!1.48e-27!83;UBERON:0009618!1.48e-27!83;UBERON:0007285!1.48e-27!83;UBERON:0004290!1.34e-25!70;UBERON:0000486!2.09e-20!82;UBERON:0002385!3.67e-20!63;UBERON:0001015!3.67e-20!63;UBERON:0000383!3.67e-20!63;UBERON:0001134!7.82e-20!61;UBERON:0002036!7.82e-20!61;UBERON:0003082!7.82e-20!61;UBERON:0004535!3.56e-15!110;UBERON:0002199!6.86e-15!45;UBERON:0002416!6.86e-15!45;UBERON:0001009!1.24e-14!113;UBERON:0002097!3.12e-13!40;UBERON:0003102!1.11e-11!95;UBERON:0005256!3.48e-11!143;UBERON:0001637!3.93e-11!42;UBERON:0003509!3.93e-11!42;UBERON:0004572!3.93e-11!42;UBERON:0004573!6.07e-11!33;UBERON:0004571!6.07e-11!33;UBERON:0004872!3.04e-09!84;UBERON:0002204!9.93e-09!167;UBERON:0002049!1.86e-08!79;UBERON:0007798!1.86e-08!79;UBERON:0001135!4.82e-08!15;UBERON:0002067!1.44e-07!9;UBERON:0004016!1.44e-07!9;UBERON:0010083!1.44e-07!9;UBERON:0004237!2.06e-07!10;UBERON:0004695!2.06e-07!10;UBERON:0002111!2.06e-07!10;UBERON:0004178!2.06e-07!10;UBERON:0000475!3.10e-07!365 | |ontology_enrichment_uberon=UBERON:0000914!1.48e-27!83;UBERON:0002329!1.48e-27!83;UBERON:0003077!1.48e-27!83;UBERON:0003059!1.48e-27!83;UBERON:0007282!1.48e-27!83;UBERON:0009618!1.48e-27!83;UBERON:0007285!1.48e-27!83;UBERON:0004290!1.34e-25!70;UBERON:0000486!2.09e-20!82;UBERON:0002385!3.67e-20!63;UBERON:0001015!3.67e-20!63;UBERON:0000383!3.67e-20!63;UBERON:0001134!7.82e-20!61;UBERON:0002036!7.82e-20!61;UBERON:0003082!7.82e-20!61;UBERON:0004535!3.56e-15!110;UBERON:0002199!6.86e-15!45;UBERON:0002416!6.86e-15!45;UBERON:0001009!1.24e-14!113;UBERON:0002097!3.12e-13!40;UBERON:0003102!1.11e-11!95;UBERON:0005256!3.48e-11!143;UBERON:0001637!3.93e-11!42;UBERON:0003509!3.93e-11!42;UBERON:0004572!3.93e-11!42;UBERON:0004573!6.07e-11!33;UBERON:0004571!6.07e-11!33;UBERON:0004872!3.04e-09!84;UBERON:0002204!9.93e-09!167;UBERON:0002049!1.86e-08!79;UBERON:0007798!1.86e-08!79;UBERON:0001135!4.82e-08!15;UBERON:0002067!1.44e-07!9;UBERON:0004016!1.44e-07!9;UBERON:0010083!1.44e-07!9;UBERON:0004237!2.06e-07!10;UBERON:0004695!2.06e-07!10;UBERON:0002111!2.06e-07!10;UBERON:0004178!2.06e-07!10;UBERON:0000475!3.10e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.60e-14;41!UBERON:0002199;1.15e-13;46!UBERON:0002416;1.15e-13;46!UBERON:0004573;2.07e-13;33!UBERON:0004571;2.07e-13;33!UBERON:0003102;1.86e-11;50!UBERON:0001637;6.41e-10;42!UBERON:0003509;6.41e-10;42!UBERON:0004572;6.41e-10;42!UBERON:0002067;1.22e-09;9!UBERON:0004237;1.54e-09;10!UBERON:0004695;1.54e-09;10!UBERON:0002111;1.54e-09;10!UBERON:0004178;1.54e-09;10!UBERON:0000947;4.47e-08;21!UBERON:0010191;4.47e-08;21!UBERON:0002385;7.27e-08;31!UBERON:0001015;7.27e-08;31!UBERON:0000383;7.27e-08;31!UBERON:0002204;5.50e-07;70!UBERON:0000948;5.65e-07;22 | |||
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| ||
|short_description=p@chr12:88813035..88813063,- | |short_description=p@chr12:88813035..88813063,- | ||
}} | }} |
Latest revision as of 13:12, 24 July 2015
Short description: | p@chr12:88813035..88813063, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:88813035..88813063, - |
Coexpression cluster: | C2247_liposarcoma_Fibroblast_Smooth_Skeletal_Mesenchymal_Pancreatic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.00e-31 | 76 |
muscle cell | 3.79e-25 | 55 |
muscle precursor cell | 4.76e-23 | 58 |
myoblast | 4.76e-23 | 58 |
multi-potent skeletal muscle stem cell | 4.76e-23 | 58 |
skin fibroblast | 5.74e-23 | 23 |
electrically responsive cell | 3.61e-21 | 61 |
electrically active cell | 3.61e-21 | 61 |
multi fate stem cell | 9.61e-20 | 427 |
somatic stem cell | 7.34e-19 | 433 |
stem cell | 3.37e-18 | 441 |
vascular associated smooth muscle cell | 7.80e-18 | 32 |
smooth muscle cell | 1.11e-17 | 43 |
smooth muscle myoblast | 1.11e-17 | 43 |
mesodermal cell | 6.29e-11 | 121 |
cardiocyte | 1.38e-09 | 16 |
aortic smooth muscle cell | 1.66e-09 | 10 |
mesenchymal stem cell of adipose | 7.57e-09 | 8 |
cell of skeletal muscle | 9.14e-08 | 9 |
fibroblast of dermis | 1.03e-07 | 6 |
connective tissue cell | 6.72e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.17e-08 | 14 |
musculoskeletal system disease | 5.22e-07 | 5 |
myotonic disease | 5.22e-07 | 5 |
muscle tissue disease | 5.22e-07 | 5 |
myopathy | 5.22e-07 | 5 |
muscular disease | 5.22e-07 | 5 |
myotonic dystrophy | 5.22e-07 | 5 |