FFCP PHASE1:Hg19::chr16:17905645..17905649,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:17905645..17905649,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr16:17905645..17905649,- | |description=CAGE_peak_at_chr16:17905645..17905649,- | ||
|id=chr16:17905645..17905649,- | |id=chr16:17905645..17905649,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.99e-50;1!UBERON:0003056;9.45e-18;3 | |||
|ontology_enrichment_disease=DOID:0060085!8.17e-10!1;DOID:3165!8.17e-10!1;DOID:0060121!8.17e-10!1;DOID:2438!8.17e-10!1;DOID:4418!8.17e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.89e-18!2;UBERON:0002757!1.89e-18!2;UBERON:0010134!1.89e-18!2;UBERON:0002784!1.89e-18!2;UBERON:0005408!1.89e-18!2;UBERON:0001899!1.89e-18!2;UBERON:0000941!4.09e-10!1;UBERON:0004904!4.09e-10!1;UBERON:0002464!4.09e-10!1;UBERON:0001021!4.09e-10!1;UBERON:0001785!4.09e-10!1;UBERON:0003296!1.10e-09!4;UBERON:0010133!1.10e-09!4;UBERON:0002902!2.26e-09!1;UBERON:0009899!2.26e-09!1;UBERON:0001882!2.46e-09!1;UBERON:0005403!2.46e-09!1 | |ontology_enrichment_uberon=UBERON:0001905!1.89e-18!2;UBERON:0002757!1.89e-18!2;UBERON:0010134!1.89e-18!2;UBERON:0002784!1.89e-18!2;UBERON:0005408!1.89e-18!2;UBERON:0001899!1.89e-18!2;UBERON:0000941!4.09e-10!1;UBERON:0004904!4.09e-10!1;UBERON:0002464!4.09e-10!1;UBERON:0001021!4.09e-10!1;UBERON:0001785!4.09e-10!1;UBERON:0003296!1.10e-09!4;UBERON:0010133!1.10e-09!4;UBERON:0002902!2.26e-09!1;UBERON:0009899!2.26e-09!1;UBERON:0001882!2.46e-09!1;UBERON:0005403!2.46e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.38e-99;2!UBERON:0002757;9.38e-99;2!UBERON:0010134;9.38e-99;2!UBERON:0005408;9.38e-99;2!UBERON:0001899;9.38e-99;2!UBERON:0000941;3.99e-50;1!UBERON:0001785;3.99e-50;1!UBERON:0002464;3.99e-50;1!UBERON:0004904;3.99e-50;1!UBERON:0001021;3.99e-50;1!UBERON:0003296;4.00e-50;4!UBERON:0010133;4.00e-50;4!UBERON:0002784;4.00e-50;4!UBERON:0001894;3.16e-29;7!UBERON:0003714;7.14e-26;2!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2!UBERON:0000010;8.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.55e-98,2;UBERON:0002757,1.55e-98,2;UBERON:0010134,1.55e-98,2;UBERON:0005408,1.55e-98,2;UBERON:0001899,1.55e-98,2;UBERON:0000941,2.42e-50,1;UBERON:0001785,2.42e-50,1;UBERON:0002464,2.42e-50,1;UBERON:0004904,2.42e-50,1;UBERON:0001021,2.42e-50,1;UBERON:0003902,2.42e-50,1;UBERON:0005425,2.42e-50,1;UBERON:0003296,5.14e-50,4;UBERON:0010133,5.14e-50,4;UBERON:0002784,5.14e-50,4;UBERON:0001894,3.65e-29,7;UBERON:0006222,3.65e-29,7;UBERON:0003714,5.56e-26,2;UBERON:0005162,5.56e-26,2;UBERON:0000122,5.56e-26,2;UBERON:0001781,1.00e-13,4;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0003056,4.39e-08,61;UBERON:0007023,8.86e-08,114;UBERON:0000010,7.91e-07,8 | |||
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|short_description=p@chr16:17905645..17905649,- | |short_description=p@chr16:17905645..17905649,- | ||
}} | }} |
Latest revision as of 06:43, 25 July 2015
Short description: | p@chr16:17905645..17905649, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:17905645..17905649, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.55e-98 | 2 |
regional part of epithalamus | 1.55e-98 | 2 |
secretory circumventricular organ | 1.55e-98 | 2 |
circumventricular organ | 1.55e-98 | 2 |
epithalamus | 1.55e-98 | 2 |
cranial nerve II | 2.42e-50 | 1 |
cranial nerve | 2.42e-50 | 1 |
nerve trunk | 2.42e-50 | 1 |
nerve connecting eye with brain | 2.42e-50 | 1 |
nerve | 2.42e-50 | 1 |
retinal neural layer | 2.42e-50 | 1 |
presumptive neural retina | 2.42e-50 | 1 |
gland of diencephalon | 5.14e-50 | 4 |
neuroendocrine gland | 5.14e-50 | 4 |
regional part of diencephalon | 5.14e-50 | 4 |
diencephalon | 3.65e-29 | 7 |
future diencephalon | 3.65e-29 | 7 |
neural tissue | 5.56e-26 | 2 |
multi cell component structure | 5.56e-26 | 2 |
neuron projection bundle | 5.56e-26 | 2 |
layer of retina | 1.00e-13 | 4 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |
pre-chordal neural plate | 4.39e-08 | 61 |
adult organism | 8.86e-08 | 114 |
peripheral nervous system | 7.91e-07 | 8 |