FFCP PHASE1:Hg19::chr1:57044945..57044953,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8613 | |EntrezGene=8613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9229 | |HGNC=9229 | ||
|TSSclassifier=strong | |||
|UniProt=O14495 | |UniProt=O14495 | ||
|association_with_transcript=287bp_to_ENST00000371250_5end | |association_with_transcript=287bp_to_ENST00000371250_5end | ||
|cluster_id=chr1:57044945..57044953,- | |||
|coexpression_cluster_id=C666 | |||
|description=CAGE_peak_13_at_PPAP2B_5end | |description=CAGE_peak_13_at_PPAP2B_5end | ||
|id=chr1:57044945..57044953,- | |id=chr1:57044945..57044953,- | ||
|ontology_enrichment_celltype=CL:0002620!1.03e-08!23;CL:0000057!1.53e-08!75 | |ontology_enrichment_celltype=CL:0002620!1.03e-08!23;CL:0000057!1.53e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000135;7.80e-19;3!CL:0000388;7.80e-19;3!CL:0002617;2.25e-13;2!CL:0000136;1.87e-11;13!CL:0000214;2.13e-09;3!CL:0002615;5.18e-09;3!CL:0000499;2.68e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,3.90e-19,3;CL:0000388,3.90e-19,3;CL:0002617,2.26e-13,2;CL:0000136,5.63e-10,15;CL:0000214,2.13e-09,3;CL:0002615,3.62e-09,3;CL:0000057,1.57e-07,76;CL:0000499,2.35e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.45e-12;2!UBERON:0010227;4.08e-07;1!UBERON:0005754;4.08e-07;1!UBERON:0003099;4.08e-07;1!UBERON:0003852;4.08e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.07e-08!95;UBERON:0000468!8.86e-08!659;UBERON:0000475!2.93e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;7.80e-19;3!UBERON:0000043;7.80e-19;3!UBERON:0007845;7.80e-19;3!UBERON:0004457;3.49e-11;9!UBERON:0000042;3.49e-11;9!UBERON:0006915;2.13e-09;3!UBERON:0007616;2.13e-09;3!UBERON:0002217;2.13e-09;3!UBERON:0002018;2.13e-09;3!UBERON:0006947;1.14e-08;3!UBERON:0004054;1.14e-08;3!UBERON:0002079;4.08e-07;1!UBERON:0000998;4.08e-07;1!UBERON:0000996;4.08e-07;1!UBERON:0001301;4.08e-07;1!UBERON:0005705;4.08e-07;1!UBERON:0006868;4.08e-07;1!UBERON:0008193;4.08e-07;1!UBERON:0010912;4.08e-07;1!UBERON:0002514;4.08e-07;1!UBERON:0003457;4.08e-07;1!UBERON:0008907;4.08e-07;1!UBERON:0008001;4.08e-07;1!UBERON:0007213;4.08e-07;1!UBERON:0009891;4.08e-07;1!UBERON:0007914;4.08e-07;1!UBERON:0007375;4.08e-07;1!UBERON:0003323;4.08e-07;1!UBERON:0010258;4.08e-07;1!UBERON:0005253;4.08e-07;1!UBERON:0007842;4.08e-07;1!UBERON:0002397;4.08e-07;1!UBERON:0003113;4.08e-07;1!UBERON:0003277;4.08e-07;1!UBERON:0001709;4.08e-07;1!UBERON:0002244;4.08e-07;1!UBERON:0005620;4.08e-07;1!UBERON:0010364;4.08e-07;1!UBERON:0004288;4.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.90e-19,3;UBERON:0000043,3.90e-19,3;UBERON:0007845,3.90e-19,3;UBERON:0006915,2.13e-09,3;UBERON:0007616,2.13e-09,3;UBERON:0002217,2.13e-09,3;UBERON:0002018,2.13e-09,3;UBERON:0006947,1.69e-08,3;UBERON:0004054,1.69e-08,3;UBERON:0004457,1.76e-08,12;UBERON:0000042,1.76e-08,12;UBERON:0005705,2.37e-07,1;UBERON:0008193,2.37e-07,1;UBERON:0010912,2.37e-07,1;UBERON:0002514,2.37e-07,1;UBERON:0003457,2.37e-07,1;UBERON:0008907,2.37e-07,1;UBERON:0008001,2.37e-07,1;UBERON:0007213,2.37e-07,1;UBERON:0009891,2.37e-07,1;UBERON:0007914,2.37e-07,1;UBERON:0009292,2.37e-07,1;UBERON:0003099,2.37e-07,1;UBERON:0007375,2.37e-07,1;UBERON:0003323,2.37e-07,1;UBERON:0010258,2.37e-07,1;UBERON:0007842,2.37e-07,1;UBERON:0009494,2.37e-07,1;UBERON:0010042,2.37e-07,1;UBERON:0010045,2.37e-07,1;UBERON:0010259,2.37e-07,1;UBERON:0010359,2.37e-07,1;UBERON:0009526,2.37e-07,1;UBERON:0002397,2.37e-07,1;UBERON:0003113,2.37e-07,1;UBERON:0003277,2.37e-07,1;UBERON:0001709,2.37e-07,1;UBERON:0004066,2.37e-07,1;UBERON:0002244,2.37e-07,1;UBERON:0005620,2.37e-07,1;UBERON:0004362,2.37e-07,1;UBERON:0010364,2.37e-07,1;UBERON:0010046,2.37e-07,1;UBERON:0005868,2.37e-07,1;UBERON:0007238,2.37e-07,1;UBERON:0004288,2.37e-07,1;UBERON:0004068,2.37e-07,1;UBERON:0010334,2.37e-07,1;UBERON:0003852,2.37e-07,1;UBERON:0010253,2.37e-07,1;UBERON:0002079,3.02e-07,1;UBERON:0000996,3.62e-07,1;UBERON:0000998,4.60e-07,1;UBERON:0006868,4.60e-07,1;UBERON:0000165,5.98e-07,29;UBERON:0000930,5.98e-07,29;UBERON:0001301,6.57e-07,1 | |||
|phase1_expression=2.54349730978779,3.42560838225573,0.563817616383885,4.00293193412522,1.78784437770915,0,0,0,1.30592814099919,0,0,0.218441372130172,0.263766978228454,0.495065411840187,0.662794751455832,0,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0.32389366601898,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.30361867064741,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0.368502951935304,0.103325781175765,3.56400857184616,7.41800787835671,0,0,0,0.250237039743928,0,0.877955241761676,2.14541457059314,1.65261864797256,0,0.179389635688862,0.427114777637135,0.635795703478686,0.600182192168805,0.309157587715317,0.257640540045629,0.558350568994769,0,0.487185025805993,1.26216887122057,0.460249493211497,1.45481451136931,1.42003837006646,0.302256294682921,0.169560592310488,0,0,0,0.243947412259191,0,0,0.310983165046111,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,2.43247561282381,0.502257091432126,0,0.239624855491583,0,0,0.723906533337896,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0.713715955188647,0.315404830067869,0.234282829985426,1.20378439891088,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0,1.40330047216537,0.512556597022804,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0,0.464841513839837,0.241718899183244,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0.340906509664404,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0.989838023675989,0,0,0.66343897524122,2.63070531152258,0,0,0,0.30982349809975,0,0,0,0,0,5.2776908824416,4.61012850143863,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0.281338832821026,0,0,0.422250816255987,0,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,0.461701551022782,0,0,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0.702793337176017,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0.347119476670262,0,0.0870592065804026,1.04836000945218,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0.83088067605837,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,1.42939065274673,0,0,1.08599920350743,0,0,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0.7520696820681,0.306345576763462,0.655745261419609,0.157054096250234,0,0.610131324509816,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0.303298235083296,0,0.235265819698172,0,0,0.298509605773748,0,0,0.378806010550178,1.0062716070103,0.889811221596536,0.228840068396924,0.151230923763239,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76337971845342,2.1437183414724,0.128458450192919,0,0.319267718114302,0.205116364240755,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,1.27016115057279,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0,0,1.2679671827502,0,0,0.0644578879735772,0,0,0.705789743431384,0,0,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,2.97596014533401,4.62175628631418,1.73050624849516,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0,1.27940389140589,0.476128862927481,0,0,0,0.12729431655633,0.606351566874658,0.870866991587845,1.02669990325584,0,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0,0,1.33151354837103,0.201273793591026,0 | |phase1_expression=2.54349730978779,3.42560838225573,0.563817616383885,4.00293193412522,1.78784437770915,0,0,0,1.30592814099919,0,0,0.218441372130172,0.263766978228454,0.495065411840187,0.662794751455832,0,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0.32389366601898,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.30361867064741,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0.368502951935304,0.103325781175765,3.56400857184616,7.41800787835671,0,0,0,0.250237039743928,0,0.877955241761676,2.14541457059314,1.65261864797256,0,0.179389635688862,0.427114777637135,0.635795703478686,0.600182192168805,0.309157587715317,0.257640540045629,0.558350568994769,0,0.487185025805993,1.26216887122057,0.460249493211497,1.45481451136931,1.42003837006646,0.302256294682921,0.169560592310488,0,0,0,0.243947412259191,0,0,0.310983165046111,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,2.43247561282381,0.502257091432126,0,0.239624855491583,0,0,0.723906533337896,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0.713715955188647,0.315404830067869,0.234282829985426,1.20378439891088,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0,1.40330047216537,0.512556597022804,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0,0.464841513839837,0.241718899183244,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0.340906509664404,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0.989838023675989,0,0,0.66343897524122,2.63070531152258,0,0,0,0.30982349809975,0,0,0,0,0,5.2776908824416,4.61012850143863,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0.281338832821026,0,0,0.422250816255987,0,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,0.461701551022782,0,0,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0.702793337176017,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0.347119476670262,0,0.0870592065804026,1.04836000945218,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0.83088067605837,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,1.42939065274673,0,0,1.08599920350743,0,0,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0.7520696820681,0.306345576763462,0.655745261419609,0.157054096250234,0,0.610131324509816,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0.303298235083296,0,0.235265819698172,0,0,0.298509605773748,0,0,0.378806010550178,1.0062716070103,0.889811221596536,0.228840068396924,0.151230923763239,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76337971845342,2.1437183414724,0.128458450192919,0,0.319267718114302,0.205116364240755,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,1.27016115057279,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0,0,1.2679671827502,0,0,0.0644578879735772,0,0,0.705789743431384,0,0,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,2.97596014533401,4.62175628631418,1.73050624849516,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0,1.27940389140589,0.476128862927481,0,0,0,0.12729431655633,0.606351566874658,0.870866991587845,1.02669990325584,0,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0,0,1.33151354837103,0.201273793591026,0 | ||
|short_description=p13@PPAP2B | |short_description=p13@PPAP2B | ||
}} | }} |
Latest revision as of 16:10, 18 September 2015
Short description: | p13@PPAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PPAP2B_5end |
Coexpression cluster: | C666_tenocyte_Synoviocyte_Fibroblast_Chondrocyte_Nucleus_normal_mesenchymal |
Association with transcript: | 287bp_to_ENST00000371250_5end |
EntrezGene: | PPAP2B |
HGNC: | 9229 |
UniProt: | O14495 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 3.90e-19 | 3 |
tendon cell | 3.90e-19 | 3 |
adipocyte of breast | 2.26e-13 | 2 |
fat cell | 5.63e-10 | 15 |
synovial cell | 2.13e-09 | 3 |
adipocyte of omentum tissue | 3.62e-09 | 3 |
fibroblast | 1.57e-07 | 76 |
stromal cell | 2.35e-07 | 28 |