FFCP PHASE1:Hg19::chr11:70672805..70672817,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:70672805..70672817,-
|short_description=p14@SHANK2
|description=CAGE_peak_14_at_SHANK2_5end
|association_with_transcript=44bp_to_ENST00000468619_5end
|En...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22941 | |EntrezGene=22941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |HGNC=14295 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=44bp_to_ENST00000468619_5end | |||
|cluster_id=chr11:70672805..70672817,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_14_at_SHANK2_5end | |||
|id=chr11:70672805..70672817,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.70e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.50e-49!34;UBERON:0003528!4.50e-49!34;UBERON:0001869!3.57e-48!32;UBERON:0001049!4.05e-48!57;UBERON:0005068!4.05e-48!57;UBERON:0006241!4.05e-48!57;UBERON:0007135!4.05e-48!57;UBERON:0002619!7.05e-48!22;UBERON:0005743!2.34e-47!86;UBERON:0001017!4.23e-47!82;UBERON:0001950!5.12e-47!20;UBERON:0001893!4.41e-45!34;UBERON:0000955!3.61e-44!69;UBERON:0006238!3.61e-44!69;UBERON:0002616!4.61e-43!59;UBERON:0002791!3.72e-42!33;UBERON:0000073!4.27e-42!94;UBERON:0001016!4.27e-42!94;UBERON:0000956!8.47e-42!25;UBERON:0000203!8.47e-42!25;UBERON:0002780!4.26e-40!41;UBERON:0001890!4.26e-40!41;UBERON:0006240!4.26e-40!41;UBERON:0003080!5.08e-39!42;UBERON:0007023!9.71e-33!115;UBERON:0003075!9.33e-32!86;UBERON:0007284!9.33e-32!86;UBERON:0002346!5.22e-30!90;UBERON:0003056!1.17e-27!61;UBERON:0000033!6.51e-25!123;UBERON:0000153!2.23e-23!129;UBERON:0007811!2.23e-23!129;UBERON:0004121!1.03e-19!169;UBERON:0000924!4.64e-19!173;UBERON:0006601!4.64e-19!173;UBERON:0002021!1.23e-18!5;UBERON:0000200!5.02e-15!6;UBERON:0001872!6.21e-12!5;UBERON:0000025!9.74e-12!194;UBERON:0001871!2.06e-11!7;UBERON:0000988!1.21e-10!3;UBERON:0003076!3.30e-10!15;UBERON:0003057!3.30e-10!15;UBERON:0004733!1.08e-09!12;UBERON:0002028!1.08e-09!12;UBERON:0007277!1.08e-09!12;UBERON:0000064!1.61e-09!219;UBERON:0002680!1.86e-09!9;UBERON:0001895!1.86e-09!9;UBERON:0010092!1.86e-09!9;UBERON:0004111!2.07e-09!241;UBERON:0002308!3.34e-09!9;UBERON:0000125!3.34e-09!9;UBERON:0004732!6.73e-09!13;UBERON:0001870!1.55e-08!2;UBERON:0002148!1.06e-07!2;UBERON:0009662!1.06e-07!2;UBERON:0000477!2.38e-07!286;UBERON:0000349!3.84e-07!5;UBERON:0002298!9.47e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.07e-39;20!UBERON:0002619;6.16e-36;22!UBERON:0000956;1.00e-31;25!UBERON:0000203;1.00e-31;25!UBERON:0002021;3.67e-24;5!UBERON:0002791;3.89e-23;32!UBERON:0001869;4.79e-23;32!UBERON:0001893;3.76e-20;34!UBERON:0003528;2.54e-19;34!UBERON:0002020;2.54e-19;34!UBERON:0002780;7.18e-17;41!UBERON:0001890;7.18e-17;41!UBERON:0000955;2.13e-15;68!UBERON:0002022;7.63e-15;1!UBERON:0000073;7.70e-12;53!UBERON:0002616;7.70e-12;53!UBERON:0001016;2.73e-11;83!UBERON:0001017;4.62e-11;75!UBERON:0001871;1.50e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.92e-39,20;UBERON:0002619,5.76e-36,22;UBERON:0000956,9.46e-32,25;UBERON:0000203,9.46e-32,25;UBERON:0001017,1.61e-25,81;UBERON:0002791,6.90e-25,32;UBERON:0001869,6.90e-25,32;UBERON:0002021,3.39e-24,5;UBERON:0003528,1.98e-23,34;UBERON:0002020,1.98e-23,34;UBERON:0001893,1.98e-23,34;UBERON:0001016,6.86e-23,89;UBERON:0000955,1.05e-21,68;UBERON:0006238,1.05e-21,68;UBERON:0002780,2.05e-19,41;UBERON:0001890,2.05e-19,41;UBERON:0003080,2.05e-19,41;UBERON:0006240,2.05e-19,41;UBERON:0000073,7.01e-19,53;UBERON:0002616,7.01e-19,53;UBERON:0001049,7.69e-18,56;UBERON:0005068,7.69e-18,56;UBERON:0006241,7.69e-18,56;UBERON:0007135,7.69e-18,56;UBERON:0002022,9.36e-15,1;UBERON:0003056,6.38e-13,61;UBERON:0003075,5.82e-12,82;UBERON:0007284,5.82e-12,82;UBERON:0011216,1.32e-11,223;UBERON:0004121,2.05e-11,171;UBERON:0000924,2.05e-11,171;UBERON:0006601,2.05e-11,171;UBERON:0002346,2.29e-11,86;UBERON:0010371,3.00e-09,104;UBERON:0001871,1.27e-08,6;UBERON:0010314,4.36e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,1.17261385734044,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59873811429845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,2.90799823828566,0.463840490809256,5.98841394003583,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,1.18219047581419,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.522109747527277,0,0,0.234264445725339,0,0,0,0,0,2.75465485467441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,1.13959432720582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,2.06548492637284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,1.41696576325585,0.319267718114302,1.02558182120378,1.76450187355203,0.760729777106397,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,0,0.206686796501184,0.634158101939068,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.72350050919134,0,0,0.078493092850514,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,1.05673990496671,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97175321553653,5.23620828408453,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,1.17261385734044,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59873811429845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,2.90799823828566,0.463840490809256,5.98841394003583,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,1.18219047581419,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.522109747527277,0,0,0.234264445725339,0,0,0,0,0,2.75465485467441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,1.13959432720582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,2.06548492637284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,1.41696576325585,0.319267718114302,1.02558182120378,1.76450187355203,0.760729777106397,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,0,0.206686796501184,0.634158101939068,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.72350050919134,0,0,0.078493092850514,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,1.05673990496671,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97175321553653,5.23620828408453,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p14@SHANK2 | |||
}} | }} |
Latest revision as of 23:26, 19 September 2015
Short description: | p14@SHANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SHANK2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 44bp_to_ENST00000468619_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.70e-07 | 8 |