FFCP PHASE1:Hg19::chr3:111451297..111451320,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257068 | |EntrezGene=257068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26462 | |HGNC=26462 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000474484_5end | |association_with_transcript=0bp_to_ENST00000474484_5end | ||
|cluster_id=chr3:111451297..111451320,+ | |||
|coexpression_cluster_id=C4264 | |||
|description=CAGE_peak_3_at_PLCXD2_5end | |description=CAGE_peak_3_at_PLCXD2_5end | ||
|id=chr3:111451297..111451320,+ | |id=chr3:111451297..111451320,+ | ||
|ontology_enrichment_celltype=CL:0000223!5.60e-26!59;CL:0000066!2.83e-25!254;CL:0002076!9.31e-21!43;CL:0002368!1.41e-15!13;CL:0002202!9.92e-11!9;CL:0002632!9.92e-11!9;CL:0000181!1.28e-07!12;CL:0000417!1.28e-07!12;CL:0000668!1.28e-07!12;CL:0000414!1.28e-07!12;CL:0000412!1.28e-07!12;CL:0000182!1.28e-07!12;CL:0000082!5.91e-07!19;CL:0002251!5.98e-07!21 | |ontology_enrichment_celltype=CL:0000223!5.60e-26!59;CL:0000066!2.83e-25!254;CL:0002076!9.31e-21!43;CL:0002368!1.41e-15!13;CL:0002202!9.92e-11!9;CL:0002632!9.92e-11!9;CL:0000181!1.28e-07!12;CL:0000417!1.28e-07!12;CL:0000668!1.28e-07!12;CL:0000414!1.28e-07!12;CL:0000412!1.28e-07!12;CL:0000182!1.28e-07!12;CL:0000082!5.91e-07!19;CL:0002251!5.98e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.57e-26;42!CL:0002368;1.99e-23;13!CL:0002202;6.09e-16;9!CL:0002632;6.09e-16;9!CL:0002251;4.95e-12;20!CL:0000182;1.73e-09;12!CL:0000244;5.45e-09;4!CL:0000731;5.45e-09;4!CL:0002231;2.29e-07;3!CL:0000322;5.74e-07;3!CL:0000082;8.75e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.80e-40,58;CL:0002076,5.09e-33,42;CL:0000066,1.16e-28,253;CL:0002368,2.78e-23,13;CL:0002202,9.23e-16,9;CL:0002632,9.23e-16,9;CL:0002251,4.52e-12,20;CL:0000182,1.47e-09,12;CL:0000244,5.69e-09,4;CL:0000731,5.69e-09,4;CL:0002231,2.31e-07,3;CL:0002321,4.96e-07,250;CL:0000322,6.89e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.11e-21;58!UBERON:0001041;6.17e-13;30!UBERON:0009497;8.02e-11;13!UBERON:0004161;3.35e-10;11!UBERON:0003104;4.59e-08;31 | |||
|ontology_enrichment_disease=DOID:305!6.50e-15!106;DOID:1749!3.67e-14!14;DOID:0050687!9.94e-10!143;DOID:7!7.21e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.13e-16;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.11e-16,14;DOID:305,1.97e-15,106;DOID:0050687,1.72e-10,143;DOID:7,5.20e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.92e-28!169;UBERON:0000925!5.92e-28!169;UBERON:0006595!5.92e-28!169;UBERON:0005911!1.68e-25!82;UBERON:0001007!1.18e-22!155;UBERON:0001555!1.18e-22!155;UBERON:0007026!1.18e-22!155;UBERON:0004921!6.37e-20!129;UBERON:0004185!6.37e-20!129;UBERON:0005177!5.78e-19!107;UBERON:0000077!3.06e-16!130;UBERON:0000466!2.59e-14!126;UBERON:0003929!2.83e-13!54;UBERON:0001041!4.16e-13!98;UBERON:0007499!1.85e-12!25;UBERON:0001004!2.32e-12!72;UBERON:0009569!4.47e-12!113;UBERON:0009856!9.18e-12!26;UBERON:0009497!9.85e-12!25;UBERON:0000015!9.85e-12!25;UBERON:0002423!9.85e-12!25;UBERON:0006235!9.85e-12!25;UBERON:0004161!9.85e-12!25;UBERON:0001008!6.91e-11!45;UBERON:0000065!1.29e-10!53;UBERON:0000481!1.75e-10!347;UBERON:0005178!2.14e-10!34;UBERON:0002224!2.14e-10!34;UBERON:0006554!2.77e-10!44;UBERON:0000344!4.04e-10!12;UBERON:0005172!4.53e-10!55;UBERON:0005173!4.53e-10!55;UBERON:0005181!6.34e-10!35;UBERON:0008835!1.33e-09!22;UBERON:0003894!1.33e-09!22;UBERON:0002048!2.25e-09!22;UBERON:0000117!2.25e-09!22;UBERON:0000171!2.25e-09!22;UBERON:0000170!2.25e-09!22;UBERON:0005597!2.25e-09!22;UBERON:0000118!2.25e-09!22;UBERON:0009854!5.36e-09!23;UBERON:0003104!7.64e-09!238;UBERON:0009142!7.64e-09!238;UBERON:0000062!1.22e-08!511;UBERON:0004807!1.55e-08!28;UBERON:0002417!2.65e-08!61;UBERON:0000916!2.65e-08!61;UBERON:0005153!2.78e-08!37;UBERON:0000475!4.51e-08!365;UBERON:0000161!4.71e-08!35;UBERON:0005157!5.68e-08!51;UBERON:0000464!6.07e-08!104;UBERON:0003729!1.33e-07!5;UBERON:0000365!1.35e-07!5;UBERON:0002107!2.26e-07!19;UBERON:0006925!2.26e-07!19;UBERON:0008836!2.26e-07!19;UBERON:0007196!3.14e-07!14;UBERON:0001558!3.14e-07!14;UBERON:0002100!3.55e-07!216;UBERON:0004111!3.99e-07!241;UBERON:0004802!5.91e-07!19;UBERON:0000115!5.91e-07!19;UBERON:0000489!7.28e-07!32;UBERON:0008947!7.89e-07!38;UBERON:0003258!7.89e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0005911;9.70e-13;36!UBERON:0000344;2.30e-12;20!UBERON:0000365;6.23e-11;5!UBERON:0006554;3.28e-10;30!UBERON:0001008;3.28e-10;30!UBERON:0004807;4.47e-10;22!UBERON:0002048;5.10e-10;22!UBERON:0000117;5.10e-10;22!UBERON:0000171;5.10e-10;22!UBERON:0000170;5.10e-10;22!UBERON:0000486;9.67e-10;12!UBERON:0003343;1.93e-09;4!UBERON:0004785;1.93e-09;4!UBERON:0005178;2.65e-09;34!UBERON:0002224;2.65e-09;34!UBERON:0005910;5.11e-09;6!UBERON:0002365;7.81e-09;31!UBERON:0002330;7.81e-09;31!UBERON:0003729;7.86e-09;13!UBERON:0007196;8.02e-09;15!UBERON:0001558;8.02e-09;15!UBERON:0002423;9.52e-09;25!UBERON:0005181;9.79e-09;35!UBERON:0003350;1.07e-08;8!UBERON:0000065;1.44e-08;44!UBERON:0002107;1.63e-08;19!UBERON:0006925;1.63e-08;19!UBERON:0001004;3.13e-07;65!UBERON:0003929;5.65e-07;7!UBERON:0004821;5.74e-07;3!UBERON:0007499;5.74e-07;3!UBERON:0003215;5.74e-07;3!UBERON:0010368;5.74e-07;3!UBERON:0009911;5.74e-07;3!UBERON:0002299;5.74e-07;3!UBERON:0006524;5.74e-07;3!UBERON:0008874;5.74e-07;3!UBERON:0002169;5.74e-07;3!UBERON:0004894;5.74e-07;3!UBERON:0000161;6.79e-07;19!UBERON:0000166;6.79e-07;19!UBERON:0000485;7.92e-07;7!UBERON:0004802;8.75e-07;19!UBERON:0000115;8.75e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.86e-24,82;UBERON:0004119,1.56e-22,160;UBERON:0000925,1.56e-22,160;UBERON:0006595,1.56e-22,160;UBERON:0005177,1.39e-18,101;UBERON:0001007,9.44e-17,145;UBERON:0001555,9.44e-17,145;UBERON:0007026,9.44e-17,145;UBERON:0004921,2.75e-14,118;UBERON:0001004,3.13e-14,74;UBERON:0001041,9.11e-13,87;UBERON:0007499,1.40e-12,25;UBERON:0009569,1.44e-12,112;UBERON:0000344,2.09e-12,20;UBERON:0009856,5.87e-12,26;UBERON:0000365,6.50e-11,5;UBERON:0003929,1.05e-10,54;UBERON:0000065,1.58e-10,54;UBERON:0005178,2.01e-10,34;UBERON:0002224,2.01e-10,34;UBERON:0005181,5.16e-10,35;UBERON:0002048,5.35e-10,22;UBERON:0000117,5.35e-10,22;UBERON:0000171,5.35e-10,22;UBERON:0000170,5.35e-10,22;UBERON:0005597,5.35e-10,22;UBERON:0000118,5.35e-10,22;UBERON:0005172,1.72e-09,54;UBERON:0005173,1.72e-09,54;UBERON:0003343,1.81e-09,4;UBERON:0004785,1.81e-09,4;UBERON:0005910,5.29e-09,6;UBERON:0002365,5.69e-09,31;UBERON:0002330,5.69e-09,31;UBERON:0003729,7.35e-09,13;UBERON:0009497,8.16e-09,25;UBERON:0000015,8.16e-09,25;UBERON:0002423,8.16e-09,25;UBERON:0006235,8.16e-09,25;UBERON:0004161,8.16e-09,25;UBERON:0008835,8.86e-09,22;UBERON:0003894,8.86e-09,22;UBERON:0007196,1.01e-08,15;UBERON:0001558,1.01e-08,15;UBERON:0003350,1.08e-08,8;UBERON:0002107,1.46e-08,19;UBERON:0006925,1.46e-08,19;UBERON:0008836,1.46e-08,19;UBERON:0004807,1.51e-08,28;UBERON:0006554,1.57e-08,47;UBERON:0005153,2.21e-08,37;UBERON:0009854,2.74e-08,23;UBERON:0001008,2.90e-08,48;UBERON:0002417,4.82e-08,60;UBERON:0000916,4.82e-08,60;UBERON:0008947,1.02e-07,38;UBERON:0003258,1.02e-07,38;UBERON:0005157,1.15e-07,47;UBERON:0004821,6.89e-07,3;UBERON:0003215,6.89e-07,3;UBERON:0010368,6.89e-07,3;UBERON:0009911,6.89e-07,3;UBERON:0002299,6.89e-07,3;UBERON:0006524,6.89e-07,3;UBERON:0008874,6.89e-07,3;UBERON:0002169,6.89e-07,3;UBERON:0004894,6.89e-07,3;UBERON:0002100,7.35e-07,199 | |||
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|short_description=p3@PLCXD2 | |short_description=p3@PLCXD2 | ||
}} | }} |
Latest revision as of 12:46, 19 September 2015
Short description: | p3@PLCXD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLCXD2_5end |
Coexpression cluster: | C4264_Small_oral_malignant_Prostate_epidermoid_argyrophil_Urothelial |
Association with transcript: | 0bp_to_ENST00000474484_5end |
EntrezGene: | PLCXD2 |
HGNC: | 26462 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.80e-40 | 58 |
endo-epithelial cell | 5.09e-33 | 42 |
epithelial cell | 1.16e-28 | 253 |
respiratory epithelial cell | 2.78e-23 | 13 |
epithelial cell of tracheobronchial tree | 9.23e-16 | 9 |
epithelial cell of lower respiratory tract | 9.23e-16 | 9 |
epithelial cell of alimentary canal | 4.52e-12 | 20 |
hepatocyte | 1.47e-09 | 12 |
transitional epithelial cell | 5.69e-09 | 4 |
urothelial cell | 5.69e-09 | 4 |
epithelial cell of prostate | 2.31e-07 | 3 |
embryonic cell | 4.96e-07 | 250 |
pneumocyte | 6.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.11e-16 | 14 |
carcinoma | 1.97e-15 | 106 |
cell type cancer | 1.72e-10 | 143 |
disease of anatomical entity | 5.20e-07 | 39 |