FFCP PHASE1:Hg19::chr12:130313403..130313404,-: Difference between revisions
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|id=chr12:130313403..130313404,-
|short_description=p@chr12:130313403..130313404,-
|description=CAGE_peak_at_chr12:130313403..130313404,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:130313403..130313404,- | |||
|coexpression_cluster_id=C1659 | |||
|description=CAGE_peak_at_chr12:130313403..130313404,- | |||
|id=chr12:130313403..130313404,- | |||
|ontology_enrichment_celltype=CL:0000540!6.85e-07!6;CL:0000031!6.85e-07!6;CL:0000404!6.85e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.55e-08;6!CL:0000404;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.78e-08,6;CL:0000031,6.78e-08,6;CL:0000404,6.78e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000031;6.55e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001905;5.21e-79;2!UBERON:0002757;5.21e-79;2!UBERON:0010134;5.21e-79;2!UBERON:0005408;5.21e-79;2!UBERON:0001899;5.21e-79;2!UBERON:0003296;3.31e-40;4!UBERON:0010133;3.31e-40;4!UBERON:0002784;3.31e-40;4!UBERON:0001894;1.61e-23;7!UBERON:0002780;6.49e-11;41!UBERON:0001890;6.49e-11;41!UBERON:0002021;2.53e-09;5!UBERON:0001872;3.10e-09;5!UBERON:0001950;1.34e-08;20!UBERON:0000073;5.89e-08;53!UBERON:0002616;5.89e-08;53!UBERON:0002619;6.19e-08;22!UBERON:0000956;3.96e-07;25!UBERON:0000203;3.96e-07;25 | |||
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|short_description=p@chr12:130313403..130313404,- | |||
}} | }} |
Latest revision as of 06:43, 24 July 2015
Short description: | p@chr12:130313403..130313404, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:130313403..130313404, - |
Coexpression cluster: | C1659_pineal_occipital_middle_parietal_medial_brain_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.78e-08 | 6 |
neuroblast | 6.78e-08 | 6 |
electrically signaling cell | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 5.22e-79 | 2 |
regional part of epithalamus | 5.22e-79 | 2 |
secretory circumventricular organ | 5.22e-79 | 2 |
circumventricular organ | 5.22e-79 | 2 |
epithalamus | 5.22e-79 | 2 |
gland of diencephalon | 3.31e-40 | 4 |
neuroendocrine gland | 3.31e-40 | 4 |
regional part of diencephalon | 3.31e-40 | 4 |
diencephalon | 1.61e-23 | 7 |
future diencephalon | 1.61e-23 | 7 |
regional part of forebrain | 9.03e-16 | 41 |
forebrain | 9.03e-16 | 41 |
anterior neural tube | 9.03e-16 | 41 |
future forebrain | 9.03e-16 | 41 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 1.98e-12 | 53 |
regional part of brain | 1.98e-12 | 53 |
neural tube | 8.22e-12 | 56 |
neural rod | 8.22e-12 | 56 |
future spinal cord | 8.22e-12 | 56 |
neural keel | 8.22e-12 | 56 |
nervous system | 2.13e-11 | 89 |
pre-chordal neural plate | 6.50e-11 | 61 |
brain | 9.66e-10 | 68 |
future brain | 9.66e-10 | 68 |
occipital lobe | 2.53e-09 | 5 |
parietal lobe | 2.97e-09 | 5 |
neocortex | 1.32e-08 | 20 |
neural plate | 2.59e-08 | 82 |
presumptive neural plate | 2.59e-08 | 82 |
neurectoderm | 5.87e-08 | 86 |
regional part of cerebral cortex | 6.08e-08 | 22 |
cerebral cortex | 3.90e-07 | 25 |
pallium | 3.90e-07 | 25 |