FFCP PHASE1:Hg19::chr12:16753639..16753656,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:16753639..16753656,-
|short_description=p26@LMO3
|description=CAGE_peak_26_at_LMO3_5end
|association_with_transcript=137bp_to_AB385536,EU446874_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55885 | |EntrezGene=55885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6643 | |HGNC=6643 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=137bp_to_AB385536,EU446874_5end | |||
|cluster_id=chr12:16753639..16753656,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_26_at_LMO3_5end | |||
|id=chr12:16753639..16753656,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002617;2.60e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,3.27e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.60e-10;2!UBERON:0006215;2.71e-07;3!UBERON:0009847;2.71e-07;3!UBERON:0003353;2.71e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p26@LMO3 | |||
}} | }} |
Latest revision as of 16:14, 17 September 2015
Short description: | p26@LMO3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_LMO3_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 137bp_to_AB385536, EU446874_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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adipocyte of breast | 3.27e-10 | 2 |