FFCP PHASE1:Hg19::chr3:2553281..2553294,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152330 | |EntrezGene=152330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2174 | |HGNC=2174 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000430505,uc003bpd.1_5end | |association_with_transcript=8bp_to_ENST00000430505,uc003bpd.1_5end | ||
|cluster_id=chr3:2553281..2553294,+ | |||
|description=CAGE_peak_8_at_CNTN4_5end | |description=CAGE_peak_8_at_CNTN4_5end | ||
|id=chr3:2553281..2553294,+ | |id=chr3:2553281..2553294,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;2.18e-13;1!CL:0000167;6.42e-13;1!CL:0000164;6.42e-13;1!CL:0000502;6.42e-13;1!CL:0000172;6.42e-13;1!CL:0000173;6.42e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.32e-13,1;CL:0000167,8.64e-13,1;CL:0000164,8.64e-13,1;CL:0000502,8.64e-13,1;CL:0000172,8.64e-13,1;CL:0000173,8.64e-13,1;CL:0002351,8.64e-13,1 | |||
|ontology_enrichment_development_v019=CL:0002351;6.42e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;6.42e-13;1!DOID:1115;8.41e-10;20!DOID:154;2.50e-07;2!DOID:4236;2.50e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,8.64e-13,1;DOID:1115,8.12e-10,20;DOID:154,2.43e-07,2;DOID:4236,2.43e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.25e-45!94;UBERON:0001016!3.25e-45!94;UBERON:0005743!4.60e-45!86;UBERON:0001017!1.23e-44!82;UBERON:0002619!1.76e-42!22;UBERON:0001049!3.73e-42!57;UBERON:0005068!3.73e-42!57;UBERON:0006241!3.73e-42!57;UBERON:0007135!3.73e-42!57;UBERON:0001950!1.10e-41!20;UBERON:0001893!6.82e-41!34;UBERON:0002780!9.63e-41!41;UBERON:0001890!9.63e-41!41;UBERON:0006240!9.63e-41!41;UBERON:0001869!1.12e-39!32;UBERON:0003080!1.18e-39!42;UBERON:0000955!1.15e-38!69;UBERON:0006238!1.15e-38!69;UBERON:0002791!4.86e-38!33;UBERON:0002616!1.82e-37!59;UBERON:0003075!2.81e-37!86;UBERON:0007284!2.81e-37!86;UBERON:0000956!4.45e-37!25;UBERON:0000203!4.45e-37!25;UBERON:0002020!7.69e-37!34;UBERON:0003528!7.69e-37!34;UBERON:0003056!2.47e-36!61;UBERON:0002346!2.82e-35!90;UBERON:0004121!1.55e-27!169;UBERON:0000153!3.23e-27!129;UBERON:0007811!3.23e-27!129;UBERON:0000033!4.11e-27!123;UBERON:0000924!1.09e-26!173;UBERON:0006601!1.09e-26!173;UBERON:0007023!3.95e-19!115;UBERON:0001872!7.98e-19!5;UBERON:0000200!8.51e-16!6;UBERON:0002771!4.32e-12!3;UBERON:0002021!7.59e-12!5;UBERON:0001871!1.64e-11!7;UBERON:0000025!1.81e-09!194;UBERON:0000064!3.72e-09!219;UBERON:0004111!5.07e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.54e-19;20!UBERON:0002619;8.12e-18;22!UBERON:0001870;2.20e-16;3!UBERON:0000956;9.94e-16;25!UBERON:0000203;9.94e-16;25!UBERON:0002784;5.38e-13;4!UBERON:0002581;6.42e-13;1!UBERON:0002780;1.01e-12;41!UBERON:0001890;1.01e-12;41!UBERON:0001869;1.33e-11;32!UBERON:0002791;5.76e-11;32!UBERON:0003528;1.19e-10;34!UBERON:0002020;1.19e-10;34!UBERON:0001872;2.47e-10;5!UBERON:0001893;4.23e-10;34!UBERON:0000200;1.17e-08;6!UBERON:0001894;8.35e-08;7!UBERON:0000073;1.98e-07;53!UBERON:0002616;1.98e-07;53!UBERON:0001905;2.28e-07;2!UBERON:0002757;2.28e-07;2!UBERON:0010134;2.28e-07;2!UBERON:0005408;2.28e-07;2!UBERON:0001899;2.28e-07;2!UBERON:0001897;2.74e-07;2!UBERON:0010225;2.74e-07;2!UBERON:0002702;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.44e-19,20;UBERON:0002619,7.65e-18,22;UBERON:0002780,5.41e-17,41;UBERON:0001890,5.41e-17,41;UBERON:0003080,5.41e-17,41;UBERON:0006240,5.41e-17,41;UBERON:0001870,1.74e-16,3;UBERON:0000956,9.44e-16,25;UBERON:0000203,9.44e-16,25;UBERON:0003056,3.56e-14,61;UBERON:0000073,4.91e-13,53;UBERON:0002616,4.91e-13,53;UBERON:0002784,5.39e-13,4;UBERON:0002581,9.73e-13,1;UBERON:0002791,2.41e-12,32;UBERON:0001869,2.41e-12,32;UBERON:0001049,2.64e-12,56;UBERON:0005068,2.64e-12,56;UBERON:0006241,2.64e-12,56;UBERON:0007135,2.64e-12,56;UBERON:0003528,1.28e-11,34;UBERON:0002020,1.28e-11,34;UBERON:0001893,1.28e-11,34;UBERON:0003075,2.55e-10,82;UBERON:0007284,2.55e-10,82;UBERON:0001872,2.98e-10,5;UBERON:0000955,7.34e-10,68;UBERON:0006238,7.34e-10,68;UBERON:0002346,8.55e-10,86;UBERON:0000200,1.31e-08,6;UBERON:0001017,3.53e-08,81;UBERON:0010371,6.31e-08,104;UBERON:0001894,8.35e-08,7;UBERON:0006222,8.35e-08,7;UBERON:0001905,2.28e-07,2;UBERON:0002757,2.28e-07,2;UBERON:0010134,2.28e-07,2;UBERON:0005408,2.28e-07,2;UBERON:0001899,2.28e-07,2;UBERON:0001016,2.72e-07,89;UBERON:0001897,2.74e-07,2;UBERON:0010225,2.74e-07,2;UBERON:0002702,4.17e-07,2 | |||
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| ||
|short_description=p8@CNTN4 | |short_description=p8@CNTN4 | ||
}} | }} |
Latest revision as of 20:34, 17 September 2015
Short description: | p8@CNTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CNTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000430505, uc003bpd.1_5end |
EntrezGene: | CNTN4 |
HGNC: | 2174 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.32e-13 | 1 |
peptide hormone secreting cell | 8.64e-13 | 1 |
enteroendocrine cell | 8.64e-13 | 1 |
type D enteroendocrine cell | 8.64e-13 | 1 |
somatostatin secreting cell | 8.64e-13 | 1 |
pancreatic D cell | 8.64e-13 | 1 |
progenitor cell of endocrine pancreas | 8.64e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 8.64e-13 | 1 |
sarcoma | 8.12e-10 | 20 |
mixed cell type cancer | 2.43e-07 | 2 |
carcinosarcoma | 2.43e-07 | 2 |