FFCP PHASE1:Hg19::chr12:54785074..54785122,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:54785074..54785122,-
|short_description=p2@ZNF385A
|description=CAGE_peak_2_at_ZNF385A_5end
|association_with_transcript=0bp_to_ENST00000338010,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25946 | |EntrezGene=25946 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17521 | |HGNC=17521 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PM9,F8VWV6 | |UniProt=Q96PM9,F8VWV6 | ||
|association_with_transcript=0bp_to_ENST00000338010,ENST00000550774,NM_001130967,NM_001130968,uc001sfy.3,uc001sfz.3_5end | |||
|cluster_id=chr12:54785074..54785122,- | |||
|description=CAGE_peak_2_at_ZNF385A_5end | |||
|id=chr12:54785074..54785122,- | |||
|ontology_enrichment_celltype=CL:0002057!1.88e-11!42;CL:0002076!3.17e-10!43;CL:0000860!1.64e-09!45;CL:0000763!1.99e-08!112;CL:0000049!1.99e-08!112;CL:0000037!4.78e-08!172;CL:0000566!4.78e-08!172;CL:0002159!5.93e-08!13;CL:0002368!9.45e-08!13;CL:0002032!9.51e-08!165;CL:0000837!9.51e-08!165;CL:0000988!3.32e-07!182;CL:0002009!4.00e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.10e-11;33!CL:0002057;6.10e-11;33!CL:0002076;7.18e-09;42!CL:0000473;3.44e-08;39!CL:0000234;3.44e-08;39!CL:0000576;6.53e-08;48!CL:0002368;9.31e-08;13!CL:0002159;9.37e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.66e-12,42;CL:0002057,1.66e-12,42;CL:0002076,2.58e-11,42;CL:0000473,4.86e-11,48;CL:0000234,4.86e-11,48;CL:0000763,2.15e-10,108;CL:0000049,2.15e-10,108;CL:0002009,4.57e-09,61;CL:0000037,3.50e-08,168;CL:0002194,3.77e-08,59;CL:0000576,3.77e-08,59;CL:0000040,3.77e-08,59;CL:0000559,3.77e-08,59;CL:0002032,8.30e-08,161;CL:0000837,8.30e-08,161;CL:0000988,9.17e-08,177;CL:0002159,9.40e-08,14;CL:0002368,9.43e-08,13;CL:0000557,1.85e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;2.23e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.09e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.87e-18!115;UBERON:0000924!9.13e-16!173;UBERON:0006601!9.13e-16!173;UBERON:0004121!2.44e-15!169;UBERON:0000153!8.00e-15!129;UBERON:0007811!8.00e-15!129;UBERON:0001049!1.87e-14!57;UBERON:0005068!1.87e-14!57;UBERON:0006241!1.87e-14!57;UBERON:0007135!1.87e-14!57;UBERON:0002346!2.40e-14!90;UBERON:0000033!2.65e-14!123;UBERON:0003075!5.29e-14!86;UBERON:0007284!5.29e-14!86;UBERON:0003056!2.03e-13!61;UBERON:0003080!2.33e-12!42;UBERON:0002780!3.45e-12!41;UBERON:0001890!3.45e-12!41;UBERON:0006240!3.45e-12!41;UBERON:0002616!1.32e-11!59;UBERON:0005743!9.69e-11!86;UBERON:0001017!5.02e-10!82;UBERON:0000073!7.12e-10!94;UBERON:0001016!7.12e-10!94;UBERON:0002020!7.95e-10!34;UBERON:0003528!7.95e-10!34;UBERON:0001893!1.07e-09!34;UBERON:0000955!1.53e-09!69;UBERON:0006238!1.53e-09!69;UBERON:0001869!2.14e-09!32;UBERON:0002791!3.01e-09!33;UBERON:0002619!4.59e-08!22;UBERON:0000062!7.65e-08!511;UBERON:0001950!1.40e-07!20;UBERON:0000956!2.84e-07!25;UBERON:0000203!2.84e-07!25;UBERON:0000064!2.89e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.73e-08;41!UBERON:0001890;1.73e-08;41!UBERON:0002619;2.45e-08;22!UBERON:0000073;4.37e-08;53!UBERON:0002616;4.37e-08;53!UBERON:0003528;6.86e-08;34!UBERON:0002020;6.86e-08;34!UBERON:0001893;7.10e-08;34!UBERON:0001950;8.44e-08;20!UBERON:0001869;9.78e-08;32!UBERON:0002791;1.70e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,4.73e-18,104;UBERON:0007023,3.06e-16,114;UBERON:0001049,5.02e-14,56;UBERON:0005068,5.02e-14,56;UBERON:0006241,5.02e-14,56;UBERON:0007135,5.02e-14,56;UBERON:0000073,2.29e-13,53;UBERON:0002616,2.29e-13,53;UBERON:0004121,1.00e-12,171;UBERON:0000924,1.00e-12,171;UBERON:0006601,1.00e-12,171;UBERON:0002346,4.04e-12,86;UBERON:0003075,5.98e-12,82;UBERON:0007284,5.98e-12,82;UBERON:0002780,9.04e-12,41;UBERON:0001890,9.04e-12,41;UBERON:0003080,9.04e-12,41;UBERON:0006240,9.04e-12,41;UBERON:0003056,9.63e-12,61;UBERON:0001017,1.94e-09,81;UBERON:0003528,3.19e-09,34;UBERON:0002020,3.19e-09,34;UBERON:0001893,4.29e-09,34;UBERON:0000955,5.54e-09,68;UBERON:0006238,5.54e-09,68;UBERON:0001869,9.52e-09,32;UBERON:0002791,1.89e-08,32;UBERON:0001016,2.18e-08,89;UBERON:0002619,2.32e-08,22;UBERON:0001950,7.99e-08,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,5.40614660303319,10.4670175195864,0,0.527533956456907,0.618831764800233,0.331397375727916,0,0,0,0,0.369363174230364,0,0,0.572471974262113,0.821246550437305,0.125542639594803,10.6214633989652,8.94896425004409,7.87107813136792,4.32700704533794,3.83829398097213,6.34746105595912,57.0041159176935,104.518453816053,56.5723635555185,2.94375362205146,0.142169232487422,4.69760702935756,8.30993112797816,15.0408335602606,7.16135873362311,9.1805344438369,7.12566065241755,7.46969146139141,18.6109745637843,16.6265415223076,11.4014508758274,15.8051745095866,10.6903650885675,14.5561994320699,16.6861587546847,17.1627673374497,8.74984250587765,16.8925383560943,7.74581620300591,12.1883837934908,16.9418105588344,7.09555990150399,4.26974620445661,12.8555234795779,8.02322567690234,11.5080682643827,16.8224163095225,19.1485111316767,16.6227652707751,15.9615081245721,7.94339314567596,6.22822248995575,17.587406567972,13.5585558789252,10.4250645458456,20.5835830895345,11.0483290796269,4.43047342417238,3.16882929467913,5.10250319916104,2.93522103711726,3.59451619668784,4.05477610672067,7.07192581467153,1.71007646244749,1.79025009479181,2.19196984517561,3.51992488922645,3.82297027883492,3.55803701545422,5.9742231159311,4.80475184443215,3.4485146397269,4.62731410949403,3.81621501814146,6.83055562931338,2.34894875748376,6.88091810625412,6.60856642895129,3.92355994087075,5.53106578027662,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0.95569624297229,0,0,0.301150238155546,0.511946444617674,0,0,0,0.201606743224732,1.06976078313403,0.434473211648397,0,0,0,0,0,0,0,0,4.25406677238305,2.66075276955077,2.72287835648691,5.37014209540622,89.2523456316728,93.0668951388918,0,0.522389211897802,0.797747763113191,3.33886874027479,4.0039643754609,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,0,92.0158450020747,0,0,0,0,1.06400514659507,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0.937285727335186,0,1.1409436430889,0,0,0,0.140450806702248,0,0.368502951935304,0.413303124703062,0,0,0,0,0.336672227908132,0.500474079487857,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,38.4589097794961,42.0029025709885,46.1755398576296,11.5875020823116,7.81925633096763,10.5736488011262,15.8601414173517,10.0928340350251,2.18986415445498,4.69348596989448,3.21620469096443,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,3.19769940212095,0.857839051492628,87.8002283269005,46.084718835624,54.8888189367504,58.0529551143981,0.325808305310325,1.03993478527958,2.88662684050547,10.6655972577071,3.05262605013136,0,0,0,1.58040879591855,1.71697232418975,0,0.234004265139238,2.67536092119711,20.6214434770909,28.724943922005,28.3550194484773,22.0313965849007,26.7383223432845,98.5293485454593,0,0,0,0.720599767084807,0,0,0,0,5.13217338068116,0,0,0.857479297891735,0.224262168690721,0.87192013766656,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0.266422179016099,0,3.25572963234866,2.46972101034231,0,0,0,0,1.74306691720059,1.19967589418468,6.08118903205952,5.52482800575339,0,0,0,0,0,0.205476322550383,0,0.112085143993527,1.37921532141349,0.215627574859517,2.05348858047597,1.27047312111232,0,1.54657762555539,0.670065061337395,0,0,2.99161459204025,0,0,0.500170521059677,0.542530047399471,0,0,0,0,0,0,0,0,0,0,18.9927122738858,5.49029478097369,2.68798433959754,4.09856981555372,5.76328812138599,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,2.77976734060731,58.5478893285592,36.0036666739355,0,0,0.262248829918848,1.80479845162965,4.77495090047372,1.56869953835371,4.38417673959782,3.16654886678627,0,0,0.215915916102139,0,2.16757150035082,5.51858751240339,1.52925763827023,2.49322802678617,3.1342465661105,0.219259876645935,0.261435451024901,7.69350375349168,5.576248976895,1.62689197332152,5.35813260568156,0,0,189.507627538737,134.56247092956,0,0,0,0.307007349452259,0,0.966782203814463,0,0.170453254832202,0,43.6352176552982,55.9273096032459,31.6479526986569,70.3046576946072,0,0,0,0,0,0,0,0,0.372158369359667,0,0.571890581771475,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,2.31510213706675,0.655894752046633,0,0.6196469961995,0,0.286822704408103,0,0,0,0,0,0.75894634753143,0.349934720244983,51.5750524208745,130.038641453943,69.6902303112465,4.61304623806218,81.3655154348624,94.3440263738703,118.395850994292,53.2958288480146,1.52234282769651,1.52927441428475,4.5571774973933,1.42939065274673,1.64544909234478,0.648473311192717,1.62009431171434,0,30.9789806269672,0,49.2530834121874,2.04383492638291,5.33796088012846,0.0711418433484141,3.02909918184762,13.5713972574315,7.4687094351623,0,3.57084134302011,4.7735520279288,0,0.47003968731907,0,39.9528595611784,0,8.475587702024,33.2160065398455,0,0,0.223676107892416,0,0,6.96015434738106,36.9262196843137,42.4615415207293,98.9223744953525,83.1823330018312,0.18714054040822,0.293016358543788,2.063128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| ||
|short_description=p2@ZNF385A | |||
}} | }} |
Latest revision as of 06:17, 19 September 2015
Short description: | p2@ZNF385A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZNF385A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000338010, ENST00000550774, NM_001130967, NM_001130968, uc001sfy.3, uc001sfz.3_5end |
EntrezGene: | ZNF385A |
HGNC: | 17521 |
UniProt: | Q96PM9F8VWV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.66e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-12 | 42 |
endo-epithelial cell | 2.58e-11 | 42 |
defensive cell | 4.86e-11 | 48 |
phagocyte | 4.86e-11 | 48 |
myeloid cell | 2.15e-10 | 108 |
common myeloid progenitor | 2.15e-10 | 108 |
macrophage dendritic cell progenitor | 4.57e-09 | 61 |
hematopoietic stem cell | 3.50e-08 | 168 |
monopoietic cell | 3.77e-08 | 59 |
monocyte | 3.77e-08 | 59 |
monoblast | 3.77e-08 | 59 |
promonocyte | 3.77e-08 | 59 |
hematopoietic oligopotent progenitor cell | 8.30e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.30e-08 | 161 |
hematopoietic cell | 9.17e-08 | 177 |
general ecto-epithelial cell | 9.40e-08 | 14 |
respiratory epithelial cell | 9.43e-08 | 13 |
granulocyte monocyte progenitor cell | 1.85e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 4.73e-18 | 104 |
adult organism | 3.06e-16 | 114 |
neural tube | 5.02e-14 | 56 |
neural rod | 5.02e-14 | 56 |
future spinal cord | 5.02e-14 | 56 |
neural keel | 5.02e-14 | 56 |
regional part of nervous system | 2.29e-13 | 53 |
regional part of brain | 2.29e-13 | 53 |
ectoderm-derived structure | 1.00e-12 | 171 |
ectoderm | 1.00e-12 | 171 |
presumptive ectoderm | 1.00e-12 | 171 |
neurectoderm | 4.04e-12 | 86 |
neural plate | 5.98e-12 | 82 |
presumptive neural plate | 5.98e-12 | 82 |
regional part of forebrain | 9.04e-12 | 41 |
forebrain | 9.04e-12 | 41 |
anterior neural tube | 9.04e-12 | 41 |
future forebrain | 9.04e-12 | 41 |
pre-chordal neural plate | 9.63e-12 | 61 |
central nervous system | 1.94e-09 | 81 |
brain grey matter | 3.19e-09 | 34 |
gray matter | 3.19e-09 | 34 |
telencephalon | 4.29e-09 | 34 |
brain | 5.54e-09 | 68 |
future brain | 5.54e-09 | 68 |
cerebral hemisphere | 9.52e-09 | 32 |
regional part of telencephalon | 1.89e-08 | 32 |
nervous system | 2.18e-08 | 89 |
regional part of cerebral cortex | 2.32e-08 | 22 |
neocortex | 7.99e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.09e-07 | 14 |