FFCP PHASE1:Hg19::chr1:44872537..44872548,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:44872537..44872548,+ | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr1:44872537..44872548,+ | |description=CAGE_peak_at_chr1:44872537..44872548,+ | ||
|id=chr1:44872537..44872548,+ | |id=chr1:44872537..44872548,+ | ||
|ontology_enrichment_celltype=CL:0002322!5.90e-14!5 | |ontology_enrichment_celltype=CL:0002322!5.90e-14!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.22e-09;5!CL:0000128;5.08e-07;7!CL:0000126;5.08e-07;7!CL:0000127;5.08e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.22e-09,5;CL:0002028,3.22e-09,5;CL:0000128,5.08e-07,7;CL:0000126,5.08e-07,7;CL:0000127,5.08e-07,7;CL:0002453,5.08e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002336;9.91e-41;1!UBERON:0011215;9.91e-41;1!UBERON:0001018;9.91e-41;1!UBERON:0002473;9.91e-41;1!UBERON:0005340;9.91e-41;1!UBERON:0003544;9.91e-41;1!UBERON:0005970;9.91e-41;1!UBERON:0002316;9.91e-41;1!UBERON:0001020;9.91e-41;1!UBERON:0002437;9.91e-41;1!UBERON:0002298;3.55e-27;6!UBERON:0005162;3.81e-21;2!UBERON:0000122;3.81e-21;2!UBERON:0000988;1.83e-14;3!UBERON:0001896;1.83e-14;3!UBERON:0005290;1.83e-14;3!UBERON:0004733;3.59e-14;12!UBERON:0002028;3.59e-14;12!UBERON:0004732;3.64e-13;13!UBERON:0000073;4.80e-07;53!UBERON:0002616;4.80e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,9.91e-41,1;UBERON:0011215,9.91e-41,1;UBERON:0001018,9.91e-41,1;UBERON:0002473,9.91e-41,1;UBERON:0005340,9.91e-41,1;UBERON:0003544,9.91e-41,1;UBERON:0005970,9.91e-41,1;UBERON:0002316,9.91e-41,1;UBERON:0001020,9.91e-41,1;UBERON:0002437,9.91e-41,1;UBERON:0002298,3.55e-27,6;UBERON:0005162,3.81e-21,2;UBERON:0000122,3.81e-21,2;UBERON:0001896,1.60e-14,3;UBERON:0005290,1.60e-14,3;UBERON:0010096,1.60e-14,3;UBERON:0000988,2.09e-14,3;UBERON:0004733,3.59e-14,12;UBERON:0002028,3.59e-14,12;UBERON:0007277,3.59e-14,12;UBERON:0004732,3.64e-13,13;UBERON:0003076,1.50e-11,15;UBERON:0003057,1.50e-11,15;UBERON:0000955,9.66e-10,68;UBERON:0006238,9.66e-10,68;UBERON:0001017,2.59e-08,81;UBERON:0001016,1.48e-07,89;UBERON:0000073,2.17e-07,53;UBERON:0002616,2.17e-07,53;UBERON:0001049,4.88e-07,56;UBERON:0005068,4.88e-07,56;UBERON:0006241,4.88e-07,56;UBERON:0007135,4.88e-07,56 | |||
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| ||
|short_description=p@chr1:44872537..44872548,+ | |short_description=p@chr1:44872537..44872548,+ | ||
}} | }} |
Latest revision as of 08:34, 28 July 2015
Short description: | p@chr1:44872537..44872548, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:44872537..44872548, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.22e-09 | 5 |
basophil mast progenitor cell | 3.22e-09 | 5 |
oligodendrocyte | 5.08e-07 | 7 |
macroglial cell | 5.08e-07 | 7 |
astrocyte | 5.08e-07 | 7 |
oligodendrocyte precursor cell | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 9.91e-41 | 1 |
central nervous system cell part cluster | 9.91e-41 | 1 |
axon tract | 9.91e-41 | 1 |
intercerebral commissure | 9.91e-41 | 1 |
dorsal telencephalic commissure | 9.91e-41 | 1 |
brain white matter | 9.91e-41 | 1 |
brain commissure | 9.91e-41 | 1 |
white matter | 9.91e-41 | 1 |
nervous system commissure | 9.91e-41 | 1 |
cerebral hemisphere white matter | 9.91e-41 | 1 |
brainstem | 3.55e-27 | 6 |
multi cell component structure | 3.81e-21 | 2 |
neuron projection bundle | 3.81e-21 | 2 |
medulla oblongata | 1.60e-14 | 3 |
myelencephalon | 1.60e-14 | 3 |
future myelencephalon | 1.60e-14 | 3 |
pons | 2.09e-14 | 3 |
segmental subdivision of hindbrain | 3.59e-14 | 12 |
hindbrain | 3.59e-14 | 12 |
presumptive hindbrain | 3.59e-14 | 12 |
segmental subdivision of nervous system | 3.64e-13 | 13 |
posterior neural tube | 1.50e-11 | 15 |
chordal neural plate | 1.50e-11 | 15 |
brain | 9.66e-10 | 68 |
future brain | 9.66e-10 | 68 |
central nervous system | 2.59e-08 | 81 |
nervous system | 1.48e-07 | 89 |
regional part of nervous system | 2.17e-07 | 53 |
regional part of brain | 2.17e-07 | 53 |
neural tube | 4.88e-07 | 56 |
neural rod | 4.88e-07 | 56 |
future spinal cord | 4.88e-07 | 56 |
neural keel | 4.88e-07 | 56 |