FFCP PHASE1:Hg19::chr5:71475473..71475487,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4131 | |EntrezGene=4131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6836 | |HGNC=6836 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA40 | |UniProt=D6RA40 | ||
|association_with_transcript=18bp_to_ENST00000504492,uc010iyy.1_5end | |association_with_transcript=18bp_to_ENST00000504492,uc010iyy.1_5end | ||
|cluster_id=chr5:71475473..71475487,+ | |||
|coexpression_cluster_id=C4515 | |||
|description=CAGE_peak_40_at_MAP1B_5end | |description=CAGE_peak_40_at_MAP1B_5end | ||
|id=chr5:71475473..71475487,+ | |id=chr5:71475473..71475487,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.58e-13!180;CL:0002620!4.16e-12!23;CL:0000057!5.62e-10!75 | |ontology_enrichment_celltype=CL:0000055!9.58e-13!180;CL:0002620!4.16e-12!23;CL:0000057!5.62e-10!75 | ||
|ontology_enrichment_celltype_v019=CL:0002605;2.69e-14;3!CL:0000128;6.97e-11;7!CL:0000126;6.97e-11;7!CL:0000127;6.97e-11;7!CL:0000515;5.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.99e-15,3;CL:0000128,2.75e-11,7;CL:0000126,2.75e-11,7;CL:0000127,2.75e-11,7;CL:0002453,2.75e-11,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.25e-07;3!UBERON:0003057;5.25e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.47e-26!86;UBERON:0001017!6.17e-26!82;UBERON:0001049!1.58e-25!57;UBERON:0005068!1.58e-25!57;UBERON:0006241!1.58e-25!57;UBERON:0007135!1.58e-25!57;UBERON:0003075!7.52e-23!86;UBERON:0007284!7.52e-23!86;UBERON:0000073!1.30e-22!94;UBERON:0001016!1.30e-22!94;UBERON:0000955!1.13e-21!69;UBERON:0006238!1.13e-21!69;UBERON:0002346!5.58e-21!90;UBERON:0002020!2.73e-20!34;UBERON:0003528!2.73e-20!34;UBERON:0003080!2.76e-20!42;UBERON:0001893!4.82e-20!34;UBERON:0002616!1.00e-19!59;UBERON:0002791!1.33e-19!33;UBERON:0002780!1.85e-19!41;UBERON:0001890!1.85e-19!41;UBERON:0006240!1.85e-19!41;UBERON:0001869!3.28e-18!32;UBERON:0000033!7.70e-18!123;UBERON:0003056!2.59e-17!61;UBERON:0000153!4.69e-16!129;UBERON:0007811!4.69e-16!129;UBERON:0004121!8.61e-16!169;UBERON:0000924!6.89e-15!173;UBERON:0006601!6.89e-15!173;UBERON:0000956!1.61e-14!25;UBERON:0000203!1.61e-14!25;UBERON:0000475!2.19e-13!365;UBERON:0007023!7.58e-13!115;UBERON:0002619!1.36e-11!22;UBERON:0001950!7.79e-10!20;UBERON:0002298!5.01e-08!8;UBERON:0002097!5.80e-08!40;UBERON:0002420!1.20e-07!9;UBERON:0007245!1.20e-07!9;UBERON:0010009!1.20e-07!9;UBERON:0010011!1.20e-07!9;UBERON:0000454!1.20e-07!9;UBERON:0002308!2.73e-07!9;UBERON:0000125!2.73e-07!9;UBERON:0002199!3.70e-07!45;UBERON:0002416!3.70e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.00e-11;34!UBERON:0003528;9.50e-11;34!UBERON:0002020;9.50e-11;34!UBERON:0001876;1.69e-10;2!UBERON:0000956;4.41e-10;25!UBERON:0000203;4.41e-10;25!UBERON:0002791;1.01e-09;32!UBERON:0001869;1.01e-09;32!UBERON:0000349;5.34e-09;5!UBERON:0002780;1.49e-08;41!UBERON:0001890;1.49e-08;41!UBERON:0002240;5.25e-07;3!UBERON:0005174;5.25e-07;3!UBERON:0001137;5.25e-07;3!UBERON:0001017;6.85e-07;75!UBERON:0003104;9.64e-07;7!UBERON:0009142;9.64e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,8.72e-14,82;UBERON:0007284,8.72e-14,82;UBERON:0002346,5.77e-13,86;UBERON:0001049,7.50e-13,56;UBERON:0005068,7.50e-13,56;UBERON:0006241,7.50e-13,56;UBERON:0007135,7.50e-13,56;UBERON:0001017,3.31e-12,81;UBERON:0001893,1.82e-11,34;UBERON:0003528,2.20e-11,34;UBERON:0002020,2.20e-11,34;UBERON:0002780,2.79e-11,41;UBERON:0001890,2.79e-11,41;UBERON:0003080,2.79e-11,41;UBERON:0006240,2.79e-11,41;UBERON:0001016,1.21e-10,89;UBERON:0001876,1.92e-10,2;UBERON:0000956,2.16e-10,25;UBERON:0000203,2.16e-10,25;UBERON:0010371,4.68e-10,104;UBERON:0003056,5.84e-10,61;UBERON:0000955,6.08e-10,68;UBERON:0006238,6.08e-10,68;UBERON:0000073,6.54e-10,53;UBERON:0002616,6.54e-10,53;UBERON:0002791,6.59e-10,32;UBERON:0001869,6.59e-10,32;UBERON:0004121,1.25e-09,171;UBERON:0000924,1.25e-09,171;UBERON:0006601,1.25e-09,171;UBERON:0010314,3.52e-09,132;UBERON:0000349,4.32e-09,5;UBERON:0002240,4.97e-07,3;UBERON:0005174,4.97e-07,3;UBERON:0001137,4.97e-07,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,1.43117993565528,1.91624195102038,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.289693037921647,0,0,1.22895262313288,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0,0.204154171254893,0,0.103325781175765,1.18800285728205,0,0,0,0,0.125118519871964,0,1.31693286264251,0.612975591598039,1.20190447125277,0.113432183160021,0.717558542755448,0.427114777637135,1.05965950579781,0.300091096084402,0.515262646192195,1.28820270022815,1.11670113798954,2.19409231913646,1.55899208257918,0.252433774244115,0.368199594569197,0.646584227275248,1.42003837006646,0.806016785821122,0.847802961552438,0,0,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.236613600079688,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,4.40535538905292,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15662369942424,5.7430967917057,0,0.579125226670317,1.2328579353023,1.07436577943937,0,0,0,0,0.76228387266739,1.30139853857622,0,0.502548796003046,0.637938751653163,0,0,0,0.12269149171914,0,0,0.831883446123229,0.892144943985809,0.315404830067869,0.468565659970853,1.50473049863859,0,1.03473071292505,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.561320188866147,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.183138929636687,0.330037999682352,0,0,0,0.193341436584244,0.462145851343933,0.307007349452259,0.137836572484531,0.644521469209642,0.580066775656914,0.255679882248303,0.356128142586949,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0.359744915166629,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0.422215270595328,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.26602474769461,0,0,0,1.79323189425963,0,0,5.21570280760989,0,0.622079175323615,0,0,0,0.295930216910801,0,1.11136990144637,0,1.11321717794222,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.964771509003264,0,0.442317039724898,0,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,1.55022605855557,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0,0,1.54787429224455,0,0,0,0.290967049465258,0,0.451961481561065,0.548167698587004,0,0.50648636764703,0,0.400794101257669,0.640358984218058,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0.203996435272644,0.577901179803038,0.600420288709789,0.684526894459965,0,0,0,0,1.14580212005842,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0.817220436669454,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,1.16354660725395,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.244052529803926,0.1251909307065,0.573409195690071,0.332787154610557,0.683060432355218,0,0.249960815924213,0,0,0,0,0,0,0,0,0.378806010550178,0.50313580350515,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0.400027764663154,1.71697852591396,1.6837474438296,8.83294287600557,0,0.428883182749851,0,0.453411851024545,0,0.244736704506468,0.71635536432595,0.617602894321944,0,0,0,0.168942440653073,0,1.72715170865599,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0.513833800771676,1.41696576325585,0.159633859057151,0.615349092722265,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.762764190934334,0,0.795664888465099,0.150420656698515,0.40341013740704,0,0,0.163771917510097,0.295712172434091,0.202612753855184,1.56215619722769,0,0.317079050969534,0,0,0.992422356778588,0,0,1.60710550763486,0.672567444437648,0,0,0.177404740325278,0,3.25827217931095,0.611727596791485,0.0657727735628491,0,0,0.39246546425257,1.09980912941201,0,0,0,0,0.428859265059938,0,0,0,0,0,0.3414369541879,0,0,0,0.340853619036631,0,0.4582137370881,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.735444965261716,0,0.588925401344836,1.48523200163543,1.267967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| ||
|short_description=p40@MAP1B | |short_description=p40@MAP1B | ||
}} | }} |
Latest revision as of 13:48, 18 September 2015
Short description: | p40@MAP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_MAP1B_5end |
Coexpression cluster: | C4515_mesodermal_astrocytoma_Mesenchymal_Lens_Multipotent_osteoclastoma_bone |
Association with transcript: | 18bp_to_ENST00000504492, uc010iyy.1_5end |
EntrezGene: | MAP1B |
HGNC: | 6836 |
UniProt: | D6RA40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.99e-15 | 3 |
oligodendrocyte | 2.75e-11 | 7 |
macroglial cell | 2.75e-11 | 7 |
astrocyte | 2.75e-11 | 7 |
oligodendrocyte precursor cell | 2.75e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
neural plate | 8.72e-14 | 82 |
presumptive neural plate | 8.72e-14 | 82 |
neurectoderm | 5.77e-13 | 86 |
neural tube | 7.50e-13 | 56 |
neural rod | 7.50e-13 | 56 |
future spinal cord | 7.50e-13 | 56 |
neural keel | 7.50e-13 | 56 |
central nervous system | 3.31e-12 | 81 |
telencephalon | 1.82e-11 | 34 |
brain grey matter | 2.20e-11 | 34 |
gray matter | 2.20e-11 | 34 |
regional part of forebrain | 2.79e-11 | 41 |
forebrain | 2.79e-11 | 41 |
anterior neural tube | 2.79e-11 | 41 |
future forebrain | 2.79e-11 | 41 |
nervous system | 1.21e-10 | 89 |
amygdala | 1.92e-10 | 2 |
cerebral cortex | 2.16e-10 | 25 |
pallium | 2.16e-10 | 25 |
ecto-epithelium | 4.68e-10 | 104 |
pre-chordal neural plate | 5.84e-10 | 61 |
brain | 6.08e-10 | 68 |
future brain | 6.08e-10 | 68 |
regional part of nervous system | 6.54e-10 | 53 |
regional part of brain | 6.54e-10 | 53 |
regional part of telencephalon | 6.59e-10 | 32 |
cerebral hemisphere | 6.59e-10 | 32 |
ectoderm-derived structure | 1.25e-09 | 171 |
ectoderm | 1.25e-09 | 171 |
presumptive ectoderm | 1.25e-09 | 171 |
structure with developmental contribution from neural crest | 3.52e-09 | 132 |
limbic system | 4.32e-09 | 5 |
spinal cord | 4.97e-07 | 3 |
dorsal region element | 4.97e-07 | 3 |
dorsum | 4.97e-07 | 3 |