FFCP PHASE1:Hg19::chr20:48100848..48100855,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3745 | |EntrezGene=3745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6231 | |HGNC=6231 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-358bp_to_uc002xus.1_5end | |association_with_transcript=-358bp_to_uc002xus.1_5end | ||
|cluster_id=chr20:48100848..48100855,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_KCNB1_5end | |description=CAGE_peak_4_at_KCNB1_5end | ||
|id=chr20:48100848..48100855,- | |id=chr20:48100848..48100855,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.33e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;1.84e-42;20!UBERON:0002619;9.93e-39;22!UBERON:0000200;6.00e-38;6!UBERON:0000956;3.33e-34;25!UBERON:0000203;3.33e-34;25!UBERON:0001869;1.56e-30;32!UBERON:0001893;4.42e-29;34!UBERON:0001872;4.28e-26;5!UBERON:0003528;7.04e-25;34!UBERON:0002020;7.04e-25;34!UBERON:0002791;7.18e-25;32!UBERON:0001870;7.14e-20;3!UBERON:0002780;1.75e-17;41!UBERON:0001890;1.75e-17;41!UBERON:0002581;1.54e-15;1!UBERON:0002022;1.54e-15;1!UBERON:0007190;1.54e-15;1!UBERON:0000955;7.74e-13;68!UBERON:0000073;4.25e-12;53!UBERON:0002616;4.25e-12;53!UBERON:0001017;5.11e-12;75!UBERON:0001871;3.43e-09;6!UBERON:0002771;2.00e-08;2!UBERON:0002702;2.00e-08;2!UBERON:0001016;7.86e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.43e-42,20;UBERON:0002619,1.28e-38,22;UBERON:0000200,3.40e-38,6;UBERON:0000956,4.17e-34,25;UBERON:0000203,4.17e-34,25;UBERON:0001869,6.76e-34,32;UBERON:0001893,6.40e-32,34;UBERON:0002791,9.26e-27,32;UBERON:0002780,1.76e-26,41;UBERON:0001890,1.76e-26,41;UBERON:0003080,1.76e-26,41;UBERON:0006240,1.76e-26,41;UBERON:0001872,7.18e-26,5;UBERON:0003528,3.37e-25,34;UBERON:0002020,3.37e-25,34;UBERON:0000955,1.85e-23,68;UBERON:0006238,1.85e-23,68;UBERON:0000073,1.99e-20,53;UBERON:0002616,1.99e-20,53;UBERON:0001870,3.32e-20,3;UBERON:0001017,1.28e-19,81;UBERON:0001049,2.61e-19,56;UBERON:0005068,2.61e-19,56;UBERON:0006241,2.61e-19,56;UBERON:0007135,2.61e-19,56;UBERON:0003056,1.09e-17,61;UBERON:0001016,1.36e-17,89;UBERON:0007190,8.63e-16,1;UBERON:0002581,1.34e-15,1;UBERON:0002022,2.38e-15,1;UBERON:0007023,5.58e-14,114;UBERON:0003075,5.36e-13,82;UBERON:0007284,5.36e-13,82;UBERON:0002346,2.33e-12,86;UBERON:0010371,4.39e-10,104;UBERON:0001871,4.04e-09,6;UBERON:0004121,9.71e-09,171;UBERON:0000924,9.71e-09,171;UBERON:0006601,9.71e-09,171;UBERON:0002702,1.39e-08,2;UBERON:0002771,2.67e-08,2;UBERON:0010314,9.24e-08,132;UBERON:0011216,9.47e-08,223 | |||
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| ||
|short_description=p4@KCNB1 | |short_description=p4@KCNB1 | ||
}} | }} |
Latest revision as of 19:14, 16 September 2015
Short description: | p4@KCNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KCNB1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -358bp_to_uc002xus.1_5end |
EntrezGene: | KCNB1 |
HGNC: | 6231 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data