FFCP PHASE1:Hg19::chr7:134576157..134576171,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003vsc.2,uc003vsd.2_5end | |association_with_transcript=0bp_to_uc003vsc.2,uc003vsd.2_5end | ||
|cluster_id=chr7:134576157..134576171,+ | |||
|description=CAGE_peak_15_at_CALD1_5end | |description=CAGE_peak_15_at_CALD1_5end | ||
|id=chr7:134576157..134576171,+ | |id=chr7:134576157..134576171,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.23e-07!180;CL:0000133!8.33e-07!59 | |ontology_enrichment_celltype=CL:0000055!4.23e-07!180;CL:0000133!8.33e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!3.25e-08!22;DOID:2994!3.25e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.89e-08;22!DOID:2994;2.89e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.09e-08,22;DOID:2994,1.09e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.33e-23!94;UBERON:0001016!3.33e-23!94;UBERON:0000924!5.19e-22!173;UBERON:0006601!5.19e-22!173;UBERON:0005743!1.42e-21!86;UBERON:0001017!5.78e-21!82;UBERON:0004121!2.77e-20!169;UBERON:0002346!1.50e-18!90;UBERON:0000481!1.87e-18!347;UBERON:0000955!3.74e-18!69;UBERON:0006238!3.74e-18!69;UBERON:0000033!3.72e-17!123;UBERON:0000475!4.23e-17!365;UBERON:0001049!7.85e-17!57;UBERON:0005068!7.85e-17!57;UBERON:0006241!7.85e-17!57;UBERON:0007135!7.85e-17!57;UBERON:0003075!1.04e-16!86;UBERON:0007284!1.04e-16!86;UBERON:0000153!2.60e-16!129;UBERON:0007811!2.60e-16!129;UBERON:0002616!2.80e-16!59;UBERON:0003080!7.33e-14!42;UBERON:0002780!2.42e-13!41;UBERON:0001890!2.42e-13!41;UBERON:0006240!2.42e-13!41;UBERON:0003056!8.40e-13!61;UBERON:0000119!1.46e-12!312;UBERON:0007023!4.72e-12!115;UBERON:0000477!6.15e-12!286;UBERON:0000483!6.50e-12!309;UBERON:0000922!1.12e-11!612;UBERON:0000468!1.67e-11!659;UBERON:0001893!4.74e-11!34;UBERON:0002020!5.28e-11!34;UBERON:0003528!5.28e-11!34;UBERON:0002791!1.01e-10!33;UBERON:0001869!2.03e-10!32;UBERON:0000064!2.33e-10!219;UBERON:0002050!1.97e-09!605;UBERON:0005423!1.97e-09!605;UBERON:0000062!2.90e-09!511;UBERON:0000923!3.88e-09!604;UBERON:0005291!3.88e-09!604;UBERON:0006598!3.88e-09!604;UBERON:0002532!3.88e-09!604;UBERON:0004111!2.36e-08!241;UBERON:0000467!3.84e-08!625;UBERON:0000480!5.85e-08!626;UBERON:0000956!8.41e-08!25;UBERON:0000203!8.41e-08!25;UBERON:0000025!6.55e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.69e-10;41!UBERON:0001890;6.69e-10;41!UBERON:0001893;1.24e-09;34!UBERON:0002791;2.35e-09;32!UBERON:0001869;2.63e-09;32!UBERON:0003528;2.89e-09;34!UBERON:0002020;2.89e-09;34!UBERON:0000073;1.36e-08;53!UBERON:0002616;1.36e-08;53!UBERON:0001017;4.67e-08;75!UBERON:0000955;9.35e-08;68!UBERON:0000956;2.54e-07;25!UBERON:0000203;2.54e-07;25!UBERON:0001016;4.09e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.14e-21,89;UBERON:0001017,5.86e-20,81;UBERON:0000955,1.27e-17,68;UBERON:0006238,1.27e-17,68;UBERON:0004121,2.18e-17,171;UBERON:0000924,2.18e-17,171;UBERON:0006601,2.18e-17,171;UBERON:0002346,6.28e-17,86;UBERON:0011216,1.32e-15,223;UBERON:0001049,3.47e-15,56;UBERON:0005068,3.47e-15,56;UBERON:0006241,3.47e-15,56;UBERON:0007135,3.47e-15,56;UBERON:0000073,5.53e-15,53;UBERON:0002616,5.53e-15,53;UBERON:0003075,7.05e-15,82;UBERON:0007284,7.05e-15,82;UBERON:0002780,2.50e-13,41;UBERON:0001890,2.50e-13,41;UBERON:0003080,2.50e-13,41;UBERON:0006240,2.50e-13,41;UBERON:0010314,2.57e-12,132;UBERON:0003056,2.93e-12,61;UBERON:0001893,4.91e-11,34;UBERON:0003528,5.54e-11,34;UBERON:0002020,5.54e-11,34;UBERON:0010371,5.87e-11,104;UBERON:0001869,2.79e-10,32;UBERON:0002791,4.26e-10,32;UBERON:0007023,6.64e-10,114;UBERON:0000119,6.07e-09,309;UBERON:0000483,2.42e-08,306;UBERON:0000956,3.16e-07,25;UBERON:0000203,3.16e-07,25;UBERON:0000922,9.41e-07,592 | |||
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|phase1_expression=0.908391896352783,1.07050261945492,0.281908808191942,0,1.78784437770915,0.872338524100369,0,0,1.30592814099919,0.982935746006035,0,1.09220686065086,0,3.09415882400117,2.31978163009541,0.672325146451775,0,0.730310090387373,0.487932798790507,0.738726348460727,0.816002764977012,0.626909442956176,6.01095572975219,3.14811177667634,2.13422487311165,0.152826811495903,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,0.255725123687061,2.53007406669196,0,1.59331170856906,5.5670016293577,0.486634870302636,2.45790524626576,1.10864698731282,1.49319135678314,1.0478326039817,0.364295288292542,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.732186172644509,0.367663080345869,0,1.69669483739752,1.12264686313085,2.25222960966644,0,0,0,0,0,0.436094052142534,0,0.633152558322899,0,0.573673241497627,2.12801029319014,1.68203280042692,0,0.24666754841716,4.35695449559673,1.0776853765575,1.14423332179421,2.57307626996383,2.30470369792,1.87457145467037,1.5608003841516,0.570471821544449,1.04614076386261,2.3486899728753,0.971237666208789,2.24721290723598,3.87892925384297,3.4393608847295,3.20309921644873,2.37600571456411,0.494533858557114,3.64064544775211,0,4.37673896280572,5.00474079487857,4.71008996323111,2.19488810440419,0.612975591598039,0.150238058906597,0.340296549480063,0.717558542755448,0.427114777637135,0.423863802319124,1.20036438433761,2.26715564324566,0,0,1.18143432568886,0.292311015483596,1.26216887122057,1.38074847963449,3.55621325001386,0.355009592516614,0.302256294682921,0.847802961552438,0.386521706326594,0.545492241181669,1.43402297694502,5.61079048196139,5.30119073285941,4.4153698290417,4.04278114559945,6.81266297364197,5.83963774521328,0,1.28648187638577,0,1.39310378409594,0,0.709840800239063,0.505754070234305,0.482022059766964,0.772057809126758,0.653638332277218,0.949082476444386,1.34831308160164,1.17732879075208,1.15424147083917,0,0,0.4115740113314,0,1.26755034821831,0,2.95394953340702,0,3.32068784066407,2.05881372358231,0.768251997860379,0,0.603173834469785,1.94435734832912,0.325808305310325,0,0,5.21686822387846,1.05667824812239,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.268675568108545,0,0,0,0,0,0,0,5.14332943766569,2.29193055334967,0,1.71072446022705,5.65551209868279,4.20480280981484,10.2897515747008,1.45770409648969,2.1798003441664,2.7868548611961,0,0,0.845302752556,0,0,0.771622122786426,1.41849132023278,0.532844358032199,1.28680194292333,2.17048642156577,0.823240336780769,2.28015329005615,0,0,2.1100756394171,0,0.899756920638513,0,0,0,0,0,2.85273810081437,0.579125226670317,1.64381058040307,1.79060963239896,0,0,0,0,11.1801634657884,5.20559415430487,3.09315525111078,1.50764638800914,0.637938751653163,0,0,0,6.50264906111441,2.50085260529839,1.62759014219841,0.415941723061614,0.178428988797162,0.157702415033935,0.585707074963566,0.300946099727719,0,0,0.664225598535437,1.10621501125022,3.12781012085098,2.34961388955289,0.343143423810856,0,0,0,0.303127571446259,0,0.604780586659361,0,1.2276957863045,0.280660094433074,0.384417447767103,0,0,0,2.15893571323718,1.42049380250502,3.03870477251094,3.11552657510173,0.929683027679674,1.69203229428271,0.40101294060657,1.74953878978203,1.03333003348146,2.54927635209404,0.524497659837696,1.35359883872224,2.46449078734127,1.56869953835371,1.46139224653261,3.0609972378934,0,0,2.37507507712353,0,0.812839312631559,0.501689773854853,1.52925763827023,0,1.56712328305525,0,0,1.53870075069834,0.656029291399411,1.62689197332152,1.854738209659,0,0,0.574265537996172,0,1.6068392984416,4.54352375972973,2.00263202249038,0.921022048356777,1.10269257987624,4.0819693049944,1.45016693914229,2.13066568540252,1.33548053470106,0.495854746082934,0.576570202095319,0.638063562472921,1.71968227454435,0.464845549297286,0.31481234683064,0,1.84820148105653,0,0.869932992075073,0,0.143124886741991,1.116475108079,1.2655176988749,0,0.511795582622668,7.27496279657665,1.27281299170375,0,1.97859703341646,0.54907405947211,1.7671860351853,0.202182481573316,0,0,0.48763373908959,0.731140468893853,0,2.32049849393576,1.41405431953713,2.26016233240486,0,0,0,0.578775534266688,5.9030527684197,0,0.30982349809975,0.281695602532241,3.87210650950939,1.17898849215745,0.35667105148125,1.06428319221179,1.05553817648832,2.63435914367922,0.75894634753143,1.74967360122491,0.962221127255121,0,0,1.69458841398202,0.43050537267123,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,3.36968812325356,0.121360521749513,0,0.284136146806413,0.71623345421307,2.07875276582847,0.921482106297696,1.9882952955326,3.65740482667333,0.667852230137435,0,0.63337622438398,0,1.38141957765574,7.05411693991973,0,0,0.311039587661807,1.527761969504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| ||
|short_description=p15@CALD1 | |short_description=p15@CALD1 | ||
}} | }} |
Latest revision as of 11:47, 16 September 2015
Short description: | p15@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CALD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003vsc.2, uc003vsd.2_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.14e-21 | 89 |
central nervous system | 5.86e-20 | 81 |
brain | 1.27e-17 | 68 |
future brain | 1.27e-17 | 68 |
ectoderm-derived structure | 2.18e-17 | 171 |
ectoderm | 2.18e-17 | 171 |
presumptive ectoderm | 2.18e-17 | 171 |
neurectoderm | 6.28e-17 | 86 |
organ system subdivision | 1.32e-15 | 223 |
neural tube | 3.47e-15 | 56 |
neural rod | 3.47e-15 | 56 |
future spinal cord | 3.47e-15 | 56 |
neural keel | 3.47e-15 | 56 |
regional part of nervous system | 5.53e-15 | 53 |
regional part of brain | 5.53e-15 | 53 |
neural plate | 7.05e-15 | 82 |
presumptive neural plate | 7.05e-15 | 82 |
regional part of forebrain | 2.50e-13 | 41 |
forebrain | 2.50e-13 | 41 |
anterior neural tube | 2.50e-13 | 41 |
future forebrain | 2.50e-13 | 41 |
structure with developmental contribution from neural crest | 2.57e-12 | 132 |
pre-chordal neural plate | 2.93e-12 | 61 |
telencephalon | 4.91e-11 | 34 |
brain grey matter | 5.54e-11 | 34 |
gray matter | 5.54e-11 | 34 |
ecto-epithelium | 5.87e-11 | 104 |
cerebral hemisphere | 2.79e-10 | 32 |
regional part of telencephalon | 4.26e-10 | 32 |
adult organism | 6.64e-10 | 114 |
cell layer | 6.07e-09 | 309 |
epithelium | 2.42e-08 | 306 |
cerebral cortex | 3.16e-07 | 25 |
pallium | 3.16e-07 | 25 |
embryo | 9.41e-07 | 592 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.09e-08 | 22 |
germ cell cancer | 1.09e-08 | 22 |