FFCP PHASE1:Hg19::chr14:20811766..20811801,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:20811766..20811801,+
|short_description=p1@PARP2
|description=CAGE_peak_1_at_PARP2_5end
|association_with_transcript=0bp_to_ENST00000250416,ENST0000052791...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10038 | |EntrezGene=10038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=272 | |HGNC=272 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UGN5,G3V167,E9PJ27 | |UniProt=Q9UGN5,G3V167,E9PJ27 | ||
|association_with_transcript=0bp_to_ENST00000250416,ENST00000527915,ENST00000529465,NM_001042618,NM_005484,uc001vxb.1,uc001vxc.2,uc001vxd.2_5end | |||
|cluster_id=chr14:20811766..20811801,+ | |||
|description=CAGE_peak_1_at_PARP2_5end | |||
|id=chr14:20811766..20811801,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.31e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.21e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.66e-07;82 | |||
|ontology_enrichment_disease=DOID:14566!4.19e-26!239;DOID:162!4.45e-26!235;DOID:0050687!3.91e-24!143;DOID:305!1.36e-20!106;DOID:0050686!3.33e-09!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.19e-26,239;DOID:162,4.45e-26,235;DOID:0050687,3.91e-24,143;DOID:305,1.36e-20,106;DOID:0050686,3.33e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.48e-24!94;UBERON:0001016!1.48e-24!94;UBERON:0005743!2.23e-22!86;UBERON:0001017!3.12e-22!82;UBERON:0001049!3.38e-20!57;UBERON:0005068!3.38e-20!57;UBERON:0006241!3.38e-20!57;UBERON:0007135!3.38e-20!57;UBERON:0002346!4.09e-20!90;UBERON:0002780!1.17e-19!41;UBERON:0001890!1.17e-19!41;UBERON:0006240!1.17e-19!41;UBERON:0000924!2.53e-19!173;UBERON:0006601!2.53e-19!173;UBERON:0003075!3.21e-19!86;UBERON:0007284!3.21e-19!86;UBERON:0000955!3.96e-19!69;UBERON:0006238!3.96e-19!69;UBERON:0003080!1.57e-18!42;UBERON:0004121!1.98e-18!169;UBERON:0001893!4.15e-18!34;UBERON:0002020!1.12e-17!34;UBERON:0003528!1.12e-17!34;UBERON:0001869!1.14e-17!32;UBERON:0002791!1.60e-17!33;UBERON:0002616!1.75e-17!59;UBERON:0003056!2.98e-17!61;UBERON:0000033!4.93e-15!123;UBERON:0000956!4.43e-14!25;UBERON:0000203!4.43e-14!25;UBERON:0000153!2.26e-13!129;UBERON:0007811!2.26e-13!129;UBERON:0002619!6.09e-13!22;UBERON:0001950!4.90e-12!20;UBERON:0000064!8.18e-10!219;UBERON:0000481!2.23e-09!347;UBERON:0000475!7.77e-09!365;UBERON:0000119!1.80e-08!312;UBERON:0000483!4.72e-08!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.68e-16;32!UBERON:0001893;6.73e-16;34!UBERON:0002791;1.01e-15;32!UBERON:0003528;1.39e-15;34!UBERON:0002020;1.39e-15;34!UBERON:0000956;4.31e-14;25!UBERON:0000203;4.31e-14;25!UBERON:0002780;5.06e-14;41!UBERON:0001890;5.06e-14;41!UBERON:0002619;6.00e-13;22!UBERON:0000073;1.91e-12;53!UBERON:0002616;1.91e-12;53!UBERON:0001950;5.01e-12;20!UBERON:0001016;1.65e-09;83!UBERON:0001017;2.74e-09;75!UBERON:0000955;2.74e-09;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.30e-25,89;UBERON:0001017,4.75e-23,81;UBERON:0001049,3.56e-21,56;UBERON:0005068,3.56e-21,56;UBERON:0006241,3.56e-21,56;UBERON:0007135,3.56e-21,56;UBERON:0000073,4.31e-21,53;UBERON:0002616,4.31e-21,53;UBERON:0002346,4.64e-20,86;UBERON:0000955,5.95e-20,68;UBERON:0006238,5.95e-20,68;UBERON:0002780,1.17e-19,41;UBERON:0001890,1.17e-19,41;UBERON:0003080,1.17e-19,41;UBERON:0006240,1.17e-19,41;UBERON:0003075,3.60e-19,82;UBERON:0007284,3.60e-19,82;UBERON:0004121,6.18e-19,171;UBERON:0000924,6.18e-19,171;UBERON:0006601,6.18e-19,171;UBERON:0003056,4.10e-18,61;UBERON:0001893,4.15e-18,34;UBERON:0011216,4.75e-18,223;UBERON:0003528,1.12e-17,34;UBERON:0002020,1.12e-17,34;UBERON:0001869,1.14e-17,32;UBERON:0002791,2.87e-17,32;UBERON:0010371,3.88e-16,104;UBERON:0000956,4.43e-14,25;UBERON:0000203,4.43e-14,25;UBERON:0002619,6.09e-13,22;UBERON:0010314,2.83e-12,132;UBERON:0001950,4.90e-12,20;UBERON:0000119,5.27e-08,309;UBERON:0000483,1.34e-07,306 | |||
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| ||
|short_description=p1@PARP2 | |||
}} | }} |
Latest revision as of 23:23, 18 September 2015
Short description: | p1@PARP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PARP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000250416, ENST00000527915, ENST00000529465, NM_001042618, NM_005484, uc001vxb.1, uc001vxc.2, uc001vxd.2_5end |
EntrezGene: | PARP2 |
HGNC: | 272 |
UniProt: | Q9UGN5G3V167E9PJ27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.21e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.19e-26 | 239 |
cancer | 4.45e-26 | 235 |
cell type cancer | 3.91e-24 | 143 |
carcinoma | 1.36e-20 | 106 |
organ system cancer | 3.33e-09 | 137 |