FFCP PHASE1:Hg19::chr15:45021241..45021345,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:45021241..45021345,+
|short_description=p1@TRIM69
|description=CAGE_peak_1_at_TRIM69_5end
|association_with_transcript=0bp_to_ENST00000559315,ENST00000560...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140691 | |EntrezGene=140691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17857 | |HGNC=17857 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000559315,ENST00000560554,ENST00000561237_5end | |||
|cluster_id=chr15:45021241..45021345,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_TRIM69_5end | |||
|id=chr15:45021241..45021345,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.45e-20!140;CL:0002087!6.14e-20!119;CL:0002031!1.89e-16!124;CL:0002057!6.38e-16!42;CL:0000860!3.86e-14!45;CL:0000766!6.72e-12!76;CL:0002194!1.13e-11!63;CL:0000576!1.13e-11!63;CL:0000040!1.13e-11!63;CL:0000559!1.13e-11!63;CL:0002009!1.30e-11!65;CL:0000557!1.81e-09!71;CL:0000839!8.84e-09!70;CL:0000542!1.57e-08!53;CL:0000051!1.57e-08!53;CL:0000838!2.18e-08!52;CL:0000988!2.38e-07!182;CL:0002032!3.52e-07!165;CL:0000837!3.52e-07!165;CL:0000037!6.19e-07!172;CL:0000566!6.19e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.17e-12;33!CL:0002057;3.17e-12;33!CL:0000473;2.94e-11;39!CL:0000234;2.94e-11;39!CL:0000576;3.60e-09;48!CL:0002087;2.35e-07;104!CL:0000766;5.08e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.92e-22,136;CL:0002087,8.63e-22,115;CL:0002031,5.03e-18,120;CL:0000473,4.94e-17,48;CL:0000234,4.94e-17,48;CL:0000860,6.38e-16,42;CL:0002057,6.38e-16,42;CL:0000766,1.19e-13,72;CL:0002194,1.20e-13,59;CL:0000576,1.20e-13,59;CL:0000040,1.20e-13,59;CL:0000559,1.20e-13,59;CL:0002009,1.55e-13,61;CL:0000557,5.04e-11,67;CL:0000839,2.90e-10,66;CL:0000542,1.57e-08,53;CL:0000051,1.57e-08,53;CL:0000838,2.18e-08,52;CL:0000988,3.19e-08,177;CL:0002032,6.20e-08,161;CL:0000837,6.20e-08,161;CL:0000037,1.18e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.66e-31!115;UBERON:0001049!3.24e-22!57;UBERON:0005068!3.24e-22!57;UBERON:0006241!3.24e-22!57;UBERON:0007135!3.24e-22!57;UBERON:0002346!1.01e-19!90;UBERON:0002616!2.12e-19!59;UBERON:0005743!5.70e-19!86;UBERON:0001017!6.31e-19!82;UBERON:0003075!1.31e-18!86;UBERON:0007284!1.31e-18!86;UBERON:0000073!5.33e-18!94;UBERON:0001016!5.33e-18!94;UBERON:0000955!8.68e-18!69;UBERON:0006238!8.68e-18!69;UBERON:0003080!1.90e-17!42;UBERON:0002780!3.05e-17!41;UBERON:0001890!3.05e-17!41;UBERON:0006240!3.05e-17!41;UBERON:0002020!4.17e-15!34;UBERON:0003528!4.17e-15!34;UBERON:0001893!4.49e-15!34;UBERON:0002791!1.42e-14!33;UBERON:0001869!2.05e-14!32;UBERON:0002390!2.12e-14!102;UBERON:0003061!2.12e-14!102;UBERON:0003056!8.23e-14!61;UBERON:0002193!1.63e-13!112;UBERON:0000153!9.18e-12!129;UBERON:0007811!9.18e-12!129;UBERON:0000956!3.21e-11!25;UBERON:0000203!3.21e-11!25;UBERON:0000033!5.37e-11!123;UBERON:0002619!9.59e-11!22;UBERON:0000924!1.95e-10!173;UBERON:0006601!1.95e-10!173;UBERON:0001950!4.95e-10!20;UBERON:0004121!1.26e-09!169;UBERON:0002371!2.04e-08!80;UBERON:0001474!3.50e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.87e-13;34!UBERON:0001869;4.23e-13;32!UBERON:0003528;5.44e-13;34!UBERON:0002020;5.44e-13;34!UBERON:0002791;5.64e-13;32!UBERON:0002780;1.45e-12;41!UBERON:0001890;1.45e-12;41!UBERON:0000073;4.49e-12;53!UBERON:0002616;4.49e-12;53!UBERON:0000956;3.31e-11;25!UBERON:0000203;3.31e-11;25!UBERON:0002619;9.82e-11;22!UBERON:0001950;4.98e-10;20!UBERON:0001017;1.24e-08;75!UBERON:0000955;2.22e-08;68!UBERON:0007023;2.68e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.44e-31,114;UBERON:0001049,5.36e-22,56;UBERON:0005068,5.36e-22,56;UBERON:0006241,5.36e-22,56;UBERON:0007135,5.36e-22,56;UBERON:0000073,1.54e-20,53;UBERON:0002616,1.54e-20,53;UBERON:0002346,1.86e-20,86;UBERON:0003075,2.46e-19,82;UBERON:0007284,2.46e-19,82;UBERON:0001017,1.10e-18,81;UBERON:0001016,1.17e-17,89;UBERON:0000955,1.49e-17,68;UBERON:0006238,1.49e-17,68;UBERON:0002780,3.05e-17,41;UBERON:0001890,3.05e-17,41;UBERON:0003080,3.05e-17,41;UBERON:0006240,3.05e-17,41;UBERON:0002390,4.84e-16,98;UBERON:0003061,4.84e-16,98;UBERON:0003528,4.17e-15,34;UBERON:0002020,4.17e-15,34;UBERON:0001893,4.49e-15,34;UBERON:0002193,5.45e-15,108;UBERON:0001869,2.05e-14,32;UBERON:0002791,3.11e-14,32;UBERON:0003056,7.03e-14,61;UBERON:0010371,2.81e-12,104;UBERON:0000956,3.21e-11,25;UBERON:0000203,3.21e-11,25;UBERON:0002619,9.59e-11,22;UBERON:0004121,1.18e-10,171;UBERON:0000924,1.18e-10,171;UBERON:0006601,1.18e-10,171;UBERON:0010314,1.36e-10,132;UBERON:0002405,1.78e-10,93;UBERON:0001950,4.95e-10,20;UBERON:0002371,9.84e-10,76;UBERON:0001474,2.66e-08,82;UBERON:0004765,4.81e-08,90;UBERON:0001434,1.25e-07,100 | |||
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1 | ||
|short_description=p1@TRIM69 | |||
}} | }} |
Latest revision as of 19:25, 17 September 2015
Short description: | p1@TRIM69 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM69_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000559315, ENST00000560554, ENST00000561237_5end |
EntrezGene: | TRIM69 |
HGNC: | 17857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.92e-22 | 136 |
nongranular leukocyte | 8.63e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 5.03e-18 | 120 |
defensive cell | 4.94e-17 | 48 |
phagocyte | 4.94e-17 | 48 |
classical monocyte | 6.38e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.38e-16 | 42 |
myeloid leukocyte | 1.19e-13 | 72 |
monopoietic cell | 1.20e-13 | 59 |
monocyte | 1.20e-13 | 59 |
monoblast | 1.20e-13 | 59 |
promonocyte | 1.20e-13 | 59 |
macrophage dendritic cell progenitor | 1.55e-13 | 61 |
granulocyte monocyte progenitor cell | 5.04e-11 | 67 |
myeloid lineage restricted progenitor cell | 2.90e-10 | 66 |
lymphocyte | 1.57e-08 | 53 |
common lymphoid progenitor | 1.57e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.18e-08 | 52 |
hematopoietic cell | 3.19e-08 | 177 |
hematopoietic oligopotent progenitor cell | 6.20e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.20e-08 | 161 |
hematopoietic stem cell | 1.18e-07 | 168 |