FFCP PHASE1:Hg19::chr15:50647049..50647094,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:50647049..50647094,-
|short_description=p1@FLJ10038
|description=CAGE_peak_1_at_FLJ10038_5end
|association_with_transcript=0bp_to_NR_026891,uc001zyg.2_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55056 | |EntrezGene=55056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_026891,uc001zyg.2_5end | |||
|cluster_id=chr15:50647049..50647094,- | |||
|description=CAGE_peak_1_at_FLJ10038_5end | |||
|id=chr15:50647049..50647094,- | |||
|ontology_enrichment_celltype=CL:0002057!1.44e-18!42;CL:0000860!1.53e-18!45;CL:0000738!1.42e-16!140;CL:0002087!3.99e-14!119;CL:0002031!7.47e-13!124;CL:0000766!1.96e-12!76;CL:0002009!6.72e-10!65;CL:0000037!9.40e-10!172;CL:0000566!9.40e-10!172;CL:0000557!1.25e-09!71;CL:0002194!1.33e-09!63;CL:0000576!1.33e-09!63;CL:0000040!1.33e-09!63;CL:0000559!1.33e-09!63;CL:0000988!6.39e-09!182;CL:0000791!2.11e-08!18;CL:0000789!2.11e-08!18;CL:0002420!2.11e-08!18;CL:0002419!2.11e-08!18;CL:0000790!2.11e-08!18;CL:0000839!2.74e-08!70;CL:0002032!4.59e-08!165;CL:0000837!4.59e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.20e-12;33!CL:0002057;1.20e-12;33!CL:0000576;6.50e-10;48!CL:0000791;2.14e-08;18!CL:0000789;2.14e-08;18!CL:0002419;2.14e-08;18!CL:0000473;1.03e-07;39!CL:0000234;1.03e-07;39!CL:0000766;3.39e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.44e-18,42;CL:0002057,1.44e-18,42;CL:0000738,8.58e-17,136;CL:0002087,2.31e-14,115;CL:0000473,1.06e-13,48;CL:0000234,1.06e-13,48;CL:0002031,4.88e-13,120;CL:0000766,8.22e-13,72;CL:0002009,2.95e-10,61;CL:0002194,5.86e-10,59;CL:0000576,5.86e-10,59;CL:0000040,5.86e-10,59;CL:0000559,5.86e-10,59;CL:0000557,6.42e-10,67;CL:0000037,8.20e-10,168;CL:0000988,3.07e-09,177;CL:0000839,1.58e-08,66;CL:0000791,2.11e-08,18;CL:0000789,2.11e-08,18;CL:0002420,2.11e-08,18;CL:0002419,2.11e-08,18;CL:0000790,2.11e-08,18;CL:0002032,4.14e-08,161;CL:0000837,4.14e-08,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-13;42!CL:0000790;2.14e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-14!115;UBERON:0001049!2.08e-13!57;UBERON:0005068!2.08e-13!57;UBERON:0006241!2.08e-13!57;UBERON:0007135!2.08e-13!57;UBERON:0002780!1.09e-11!41;UBERON:0001890!1.09e-11!41;UBERON:0006240!1.09e-11!41;UBERON:0003080!1.48e-11!42;UBERON:0002616!2.09e-11!59;UBERON:0000955!2.57e-11!69;UBERON:0006238!2.57e-11!69;UBERON:0001017!2.97e-11!82;UBERON:0005743!5.09e-11!86;UBERON:0002390!5.99e-11!102;UBERON:0003061!5.99e-11!102;UBERON:0000073!2.73e-10!94;UBERON:0001016!2.73e-10!94;UBERON:0001893!9.95e-10!34;UBERON:0001869!1.62e-09!32;UBERON:0002791!1.80e-09!33;UBERON:0002020!2.05e-09!34;UBERON:0003528!2.05e-09!34;UBERON:0002193!6.17e-09!112;UBERON:0002619!1.79e-08!22;UBERON:0002371!4.16e-08!80;UBERON:0000956!4.31e-08!25;UBERON:0000203!4.31e-08!25;UBERON:0001950!4.44e-08!20;UBERON:0001474!1.60e-07!86;UBERON:0003075!1.93e-07!86;UBERON:0007284!1.93e-07!86;UBERON:0002346!2.30e-07!90;UBERON:0003056!2.83e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.65e-09;32!UBERON:0002791;1.08e-08;32!UBERON:0002780;1.09e-08;41!UBERON:0001890;1.09e-08;41!UBERON:0001893;1.96e-08;34!UBERON:0002619;2.17e-08;22!UBERON:0003528;3.66e-08;34!UBERON:0002020;3.66e-08;34!UBERON:0000956;4.61e-08;25!UBERON:0000203;4.61e-08;25!UBERON:0001950;5.87e-08;20!UBERON:0000073;8.32e-08;53!UBERON:0002616;8.32e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.25e-14,114;UBERON:0001049,1.64e-13,56;UBERON:0005068,1.64e-13,56;UBERON:0006241,1.64e-13,56;UBERON:0007135,1.64e-13,56;UBERON:0000073,4.30e-13,53;UBERON:0002616,4.30e-13,53;UBERON:0002780,1.09e-11,41;UBERON:0001890,1.09e-11,41;UBERON:0003080,1.09e-11,41;UBERON:0006240,1.09e-11,41;UBERON:0000955,2.31e-11,68;UBERON:0006238,2.31e-11,68;UBERON:0001017,2.77e-11,81;UBERON:0002390,3.78e-11,98;UBERON:0003061,3.78e-11,98;UBERON:0001016,1.74e-10,89;UBERON:0001893,9.94e-10,34;UBERON:0001869,1.62e-09,32;UBERON:0002791,2.00e-09,32;UBERON:0003528,2.04e-09,34;UBERON:0002020,2.04e-09,34;UBERON:0002193,4.65e-09,108;UBERON:0002619,1.79e-08,22;UBERON:0003075,1.90e-08,82;UBERON:0007284,1.90e-08,82;UBERON:0002346,2.46e-08,86;UBERON:0002371,2.72e-08,76;UBERON:0000956,4.31e-08,25;UBERON:0000203,4.31e-08,25;UBERON:0001950,4.44e-08,20;UBERON:0001474,1.15e-07,82;UBERON:0003056,1.43e-07,61;UBERON:0004765,3.47e-07,90;UBERON:0002405,5.91e-07,93;UBERON:0001434,7.16e-07,100 | |||
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5341533556 | ||
|short_description=p1@FLJ10038 | |||
}} | }} |
Latest revision as of 23:35, 17 September 2015
Short description: | p1@FLJ10038 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FLJ10038_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_026891, uc001zyg.2_5end |
EntrezGene: | FLJ10038 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.44e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-18 | 42 |
leukocyte | 8.58e-17 | 136 |
nongranular leukocyte | 2.31e-14 | 115 |
defensive cell | 1.06e-13 | 48 |
phagocyte | 1.06e-13 | 48 |
hematopoietic lineage restricted progenitor cell | 4.88e-13 | 120 |
myeloid leukocyte | 8.22e-13 | 72 |
macrophage dendritic cell progenitor | 2.95e-10 | 61 |
monopoietic cell | 5.86e-10 | 59 |
monocyte | 5.86e-10 | 59 |
monoblast | 5.86e-10 | 59 |
promonocyte | 5.86e-10 | 59 |
granulocyte monocyte progenitor cell | 6.42e-10 | 67 |
hematopoietic stem cell | 8.20e-10 | 168 |
hematopoietic cell | 3.07e-09 | 177 |
myeloid lineage restricted progenitor cell | 1.58e-08 | 66 |
mature alpha-beta T cell | 2.11e-08 | 18 |
alpha-beta T cell | 2.11e-08 | 18 |
immature T cell | 2.11e-08 | 18 |
mature T cell | 2.11e-08 | 18 |
immature alpha-beta T cell | 2.11e-08 | 18 |
hematopoietic oligopotent progenitor cell | 4.14e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.14e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.25e-14 | 114 |
neural tube | 1.64e-13 | 56 |
neural rod | 1.64e-13 | 56 |
future spinal cord | 1.64e-13 | 56 |
neural keel | 1.64e-13 | 56 |
regional part of nervous system | 4.30e-13 | 53 |
regional part of brain | 4.30e-13 | 53 |
regional part of forebrain | 1.09e-11 | 41 |
forebrain | 1.09e-11 | 41 |
anterior neural tube | 1.09e-11 | 41 |
future forebrain | 1.09e-11 | 41 |
brain | 2.31e-11 | 68 |
future brain | 2.31e-11 | 68 |
central nervous system | 2.77e-11 | 81 |
hematopoietic system | 3.78e-11 | 98 |
blood island | 3.78e-11 | 98 |
nervous system | 1.74e-10 | 89 |
telencephalon | 9.94e-10 | 34 |
cerebral hemisphere | 1.62e-09 | 32 |
regional part of telencephalon | 2.00e-09 | 32 |
brain grey matter | 2.04e-09 | 34 |
gray matter | 2.04e-09 | 34 |
hemolymphoid system | 4.65e-09 | 108 |
regional part of cerebral cortex | 1.79e-08 | 22 |
neural plate | 1.90e-08 | 82 |
presumptive neural plate | 1.90e-08 | 82 |
neurectoderm | 2.46e-08 | 86 |
bone marrow | 2.72e-08 | 76 |
cerebral cortex | 4.31e-08 | 25 |
pallium | 4.31e-08 | 25 |
neocortex | 4.44e-08 | 20 |
bone element | 1.15e-07 | 82 |
pre-chordal neural plate | 1.43e-07 | 61 |
skeletal element | 3.47e-07 | 90 |
immune system | 5.91e-07 | 93 |
skeletal system | 7.16e-07 | 100 |