FFCP PHASE1:Hg19::chr6:24495185..24495209,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7915 | |EntrezGene=7915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=408 | |HGNC=408 | ||
|TSSclassifier=strong | |||
|UniProt=G5E949,P51649,Q546H9,Q8N3W6 | |UniProt=G5E949,P51649,Q546H9,Q8N3W6 | ||
|association_with_transcript=0bp_to_ENST00000348925,NM_001080,NM_170740,uc003nef.2,uc003neg.2_5end | |association_with_transcript=0bp_to_ENST00000348925,NM_001080,NM_170740,uc003nef.2,uc003neg.2_5end | ||
|cluster_id=chr6:24495185..24495209,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_ALDH5A1_5end | |description=CAGE_peak_1_at_ALDH5A1_5end | ||
|id=chr6:24495185..24495209,+ | |id=chr6:24495185..24495209,+ | ||
|ontology_enrichment_celltype=CL:0000542!8.47e-09!53;CL:0000051!8.47e-09!53;CL:0000838!1.43e-08!52 | |ontology_enrichment_celltype=CL:0000542!8.47e-09!53;CL:0000051!8.47e-09!53;CL:0000838!1.43e-08!52 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.85e-09,53;CL:0000051,2.85e-09,53;CL:0000838,4.94e-09,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.97e-08;82 | |||
|ontology_enrichment_disease=DOID:1240!3.84e-12!39;DOID:2531!4.66e-12!51;DOID:0060083!4.66e-12!51;DOID:8692!3.05e-10!31;DOID:162!1.48e-09!235;DOID:14566!6.77e-09!239;DOID:0050686!9.09e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.80e-10;31!DOID:1240;4.35e-10;39!DOID:2531;6.27e-08;51!DOID:0060083;6.27e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,7.58e-13,39;DOID:2531,1.04e-12,51;DOID:0060083,1.04e-12,51;DOID:8692,1.15e-10,31;DOID:162,2.21e-09,235;DOID:14566,1.31e-08,239;DOID:0050686,7.21e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.01e-34!115;UBERON:0001049!4.05e-25!57;UBERON:0005068!4.05e-25!57;UBERON:0006241!4.05e-25!57;UBERON:0007135!4.05e-25!57;UBERON:0005743!4.69e-22!86;UBERON:0001017!7.97e-22!82;UBERON:0000073!2.72e-21!94;UBERON:0001016!2.72e-21!94;UBERON:0000955!7.91e-21!69;UBERON:0006238!7.91e-21!69;UBERON:0002780!1.48e-20!41;UBERON:0001890!1.48e-20!41;UBERON:0006240!1.48e-20!41;UBERON:0002616!3.64e-20!59;UBERON:0003080!9.60e-20!42;UBERON:0002346!4.91e-18!90;UBERON:0002020!5.65e-18!34;UBERON:0003528!5.65e-18!34;UBERON:0001893!6.93e-18!34;UBERON:0002791!2.77e-17!33;UBERON:0001869!3.92e-17!32;UBERON:0003075!6.01e-17!86;UBERON:0007284!6.01e-17!86;UBERON:0002619!8.87e-14!22;UBERON:0000956!5.94e-13!25;UBERON:0000203!5.94e-13!25;UBERON:0001950!1.18e-12!20;UBERON:0003056!1.25e-12!61;UBERON:0000153!9.56e-09!129;UBERON:0007811!9.56e-09!129;UBERON:0000033!7.28e-08!123 | |ontology_enrichment_uberon=UBERON:0007023!7.01e-34!115;UBERON:0001049!4.05e-25!57;UBERON:0005068!4.05e-25!57;UBERON:0006241!4.05e-25!57;UBERON:0007135!4.05e-25!57;UBERON:0005743!4.69e-22!86;UBERON:0001017!7.97e-22!82;UBERON:0000073!2.72e-21!94;UBERON:0001016!2.72e-21!94;UBERON:0000955!7.91e-21!69;UBERON:0006238!7.91e-21!69;UBERON:0002780!1.48e-20!41;UBERON:0001890!1.48e-20!41;UBERON:0006240!1.48e-20!41;UBERON:0002616!3.64e-20!59;UBERON:0003080!9.60e-20!42;UBERON:0002346!4.91e-18!90;UBERON:0002020!5.65e-18!34;UBERON:0003528!5.65e-18!34;UBERON:0001893!6.93e-18!34;UBERON:0002791!2.77e-17!33;UBERON:0001869!3.92e-17!32;UBERON:0003075!6.01e-17!86;UBERON:0007284!6.01e-17!86;UBERON:0002619!8.87e-14!22;UBERON:0000956!5.94e-13!25;UBERON:0000203!5.94e-13!25;UBERON:0001950!1.18e-12!20;UBERON:0003056!1.25e-12!61;UBERON:0000153!9.56e-09!129;UBERON:0007811!9.56e-09!129;UBERON:0000033!7.28e-08!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.22e-16;32!UBERON:0003528;3.38e-16;34!UBERON:0002020;3.38e-16;34!UBERON:0001893;4.50e-16;34!UBERON:0002791;5.02e-16;32!UBERON:0002780;1.54e-15;41!UBERON:0001890;1.54e-15;41!UBERON:0000073;1.47e-14;53!UBERON:0002616;1.47e-14;53!UBERON:0002619;2.12e-14;22!UBERON:0000956;1.57e-13;25!UBERON:0000203;1.57e-13;25!UBERON:0001950;3.19e-13;20!UBERON:0000955;2.08e-10;68!UBERON:0001017;2.56e-10;75!UBERON:0007023;4.96e-10;114!UBERON:0001016;2.40e-09;83!UBERON:0002420;5.96e-07;9!UBERON:0007245;5.96e-07;9!UBERON:0010009;5.96e-07;9!UBERON:0010011;5.96e-07;9!UBERON:0000454;5.96e-07;9!UBERON:0000125;8.10e-07;9!UBERON:0002308;8.10e-07;9 | |||
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| ||
|short_description=p1@ALDH5A1 | |short_description=p1@ALDH5A1 | ||
}} | }} |
Latest revision as of 05:56, 17 September 2015
Short description: | p1@ALDH5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALDH5A1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000348925, NM_001080, NM_170740, uc003nef.2, uc003neg.2_5end |
EntrezGene: | ALDH5A1 |
HGNC: | 408 |
UniProt: | G5E949P51649Q546H9Q8N3W6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.85e-09 | 53 |
common lymphoid progenitor | 2.85e-09 | 53 |
lymphoid lineage restricted progenitor cell | 4.94e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.58e-13 | 39 |
hematologic cancer | 1.04e-12 | 51 |
immune system cancer | 1.04e-12 | 51 |
myeloid leukemia | 1.15e-10 | 31 |
cancer | 2.21e-09 | 235 |
disease of cellular proliferation | 1.31e-08 | 239 |
organ system cancer | 7.21e-08 | 137 |